Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92293.t1 | XP_003610723.1 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 2.30E-175 | 624.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92293.t1 | Q43317 | 85.8 | 325 | 46 | 0 | 1 | 325 | 1 | 325 | 1.4e-157 | 557.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92293.t1 | B7FKU7 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 1.6e-175 | 624.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92293 | MS.gene02466 | PPI |
| MS.gene92293 | MS.gene47527 | PPI |
| MS.gene92293 | MS.gene26579 | PPI |
| MS.gene92293 | MS.gene008717 | PPI |
| MS.gene92293 | MS.gene058651 | PPI |
| MS.gene92293 | MS.gene39577 | PPI |
| MS.gene054826 | MS.gene92293 | PPI |
| MS.gene92293 | MS.gene023918 | PPI |
| MS.gene92293 | MS.gene52446 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92293.t1 | MTR_5g006340 | 99.692 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 0.0 | 646 |
| MS.gene92293.t1 | MTR_1g103690 | 93.231 | 325 | 22 | 0 | 1 | 325 | 1 | 325 | 0.0 | 566 |
| MS.gene92293.t1 | MTR_1g081610 | 87.346 | 324 | 41 | 0 | 1 | 324 | 1 | 324 | 0.0 | 527 |
| MS.gene92293.t1 | MTR_4g087490 | 70.126 | 318 | 95 | 0 | 8 | 325 | 47 | 364 | 4.76e-169 | 474 |
| MS.gene92293.t1 | MTR_1g081620 | 72.897 | 321 | 87 | 0 | 4 | 324 | 3 | 323 | 2.31e-165 | 463 |
| MS.gene92293.t1 | MTR_1g081625 | 73.750 | 320 | 84 | 0 | 5 | 324 | 4 | 323 | 1.02e-161 | 454 |
| MS.gene92293.t1 | MTR_4g087510 | 65.723 | 318 | 100 | 2 | 8 | 325 | 47 | 355 | 2.64e-156 | 441 |
| MS.gene92293.t1 | MTR_7g078070 | 62.025 | 316 | 120 | 0 | 6 | 321 | 59 | 374 | 3.62e-144 | 412 |
| MS.gene92293.t1 | MTR_7g078070 | 62.662 | 308 | 115 | 0 | 14 | 321 | 7 | 314 | 3.71e-142 | 404 |
| MS.gene92293.t1 | MTR_7g087110 | 63.175 | 315 | 106 | 1 | 7 | 321 | 64 | 368 | 2.87e-136 | 391 |
| MS.gene92293.t1 | MTR_4g087520 | 74.074 | 270 | 70 | 0 | 56 | 325 | 1 | 270 | 2.06e-134 | 383 |
| MS.gene92293.t1 | MTR_1g081640 | 70.318 | 283 | 84 | 0 | 3 | 285 | 2 | 284 | 7.31e-130 | 373 |
| MS.gene92293.t1 | MTR_7g078070 | 62.989 | 281 | 104 | 0 | 41 | 321 | 1 | 281 | 7.53e-129 | 369 |
| MS.gene92293.t1 | MTR_5g095670 | 29.462 | 353 | 190 | 6 | 12 | 307 | 48 | 398 | 1.39e-40 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92293.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene92293.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene92293.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene92293.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene92293.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene92293.t1 | AT3G59760 | 74.528 | 318 | 81 | 0 | 7 | 324 | 112 | 429 | 2.07e-166 | 470 |
| MS.gene92293.t1 | AT3G59760 | 74.528 | 318 | 81 | 0 | 7 | 324 | 112 | 429 | 2.24e-166 | 470 |
| MS.gene92293.t1 | AT2G43750 | 74.534 | 322 | 82 | 0 | 3 | 324 | 70 | 391 | 6.16e-165 | 465 |
| MS.gene92293.t1 | AT2G43750 | 74.534 | 322 | 82 | 0 | 3 | 324 | 70 | 391 | 6.16e-165 | 465 |
| MS.gene92293.t1 | AT3G04940 | 67.593 | 324 | 105 | 0 | 1 | 324 | 1 | 324 | 2.95e-156 | 440 |
| MS.gene92293.t1 | AT3G04940 | 67.593 | 324 | 105 | 0 | 1 | 324 | 1 | 324 | 2.95e-156 | 440 |
| MS.gene92293.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene92293.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene92293.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene92293.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene92293.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene92293.t1 | AT3G59760 | 75.172 | 290 | 72 | 0 | 7 | 296 | 112 | 401 | 5.61e-151 | 431 |
| MS.gene92293.t1 | AT3G22460 | 78.519 | 270 | 38 | 1 | 56 | 325 | 1 | 250 | 3.89e-150 | 422 |
| MS.gene92293.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene92293.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene92293.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene92293.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene92293.t1 | AT3G61440 | 61.218 | 312 | 121 | 0 | 10 | 321 | 51 | 362 | 1.26e-135 | 390 |
| MS.gene92293.t1 | AT3G03630 | 61.562 | 320 | 113 | 1 | 4 | 323 | 95 | 404 | 3.51e-132 | 382 |
| MS.gene92293.t1 | AT3G61440 | 62.782 | 266 | 99 | 0 | 56 | 321 | 1 | 266 | 4.71e-117 | 339 |
| MS.gene92293.t1 | AT3G22460 | 86.188 | 181 | 25 | 0 | 8 | 188 | 8 | 188 | 2.27e-114 | 329 |
| MS.gene92293.t1 | AT5G28030 | 64.919 | 248 | 87 | 0 | 4 | 251 | 3 | 250 | 2.89e-111 | 324 |
| MS.gene92293.t1 | AT3G61440 | 59.160 | 262 | 107 | 0 | 10 | 271 | 51 | 312 | 1.03e-108 | 320 |
| MS.gene92293.t1 | AT3G61440 | 61.667 | 240 | 92 | 0 | 82 | 321 | 2 | 241 | 7.35e-103 | 302 |
| MS.gene92293.t1 | AT5G28020 | 67.932 | 237 | 76 | 0 | 88 | 324 | 1 | 237 | 2.04e-102 | 300 |
| MS.gene92293.t1 | AT1G55880 | 28.177 | 362 | 200 | 6 | 4 | 307 | 36 | 395 | 2.97e-38 | 140 |
| MS.gene92293.t1 | AT1G55880 | 30.833 | 240 | 124 | 3 | 12 | 210 | 44 | 282 | 3.97e-32 | 122 |
Find 89 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTGACGCATTTGTTTC+TGG | 0.143270 | 5.1:+1143496 | MS.gene92293:CDS |
| AGAATCATTCTATTAGCTTT+TGG | 0.227837 | 5.1:+1143226 | MS.gene92293:CDS |
| GCTCCTTTCATTCCCTTTGC+AGG | 0.253208 | 5.1:-1143271 | None:intergenic |
| GATAAAACTAACCTTTATAT+TGG | 0.258346 | 5.1:-1143575 | None:intergenic |
| GCCAAAAGGCCAGAAAATTC+TGG | 0.272006 | 5.1:+1145126 | MS.gene92293:CDS |
| AGAGCAAAATTCCAATATAA+AGG | 0.317751 | 5.1:+1143564 | MS.gene92293:CDS |
| TTGTAGGTGGGAATATCTTC+TGG | 0.327966 | 5.1:+1145075 | MS.gene92293:intron |
| GTCTATTTAGATACACTAAT+GGG | 0.361833 | 5.1:-1142681 | None:intergenic |
| TGCCCGAGTTGCTGCAAAAC+TGG | 0.363669 | 5.1:+1142720 | MS.gene92293:CDS |
| ATGCCAGTGTTACCACTTGT+TGG | 0.374604 | 5.1:-1143127 | None:intergenic |
| AAACCACCGGTCCAGAGATA+TGG | 0.380421 | 5.1:+1143458 | MS.gene92293:CDS |
| AAATTGACGCATTTGTTTCT+GGG | 0.385410 | 5.1:+1143497 | MS.gene92293:CDS |
| TGGCATTGGATTAGCCTTCA+TGG | 0.398016 | 5.1:+1143144 | MS.gene92293:CDS |
| ATATTTCCCAGCACCGGTTA+TGG | 0.401918 | 5.1:-1143536 | None:intergenic |
| TGCTGCAAAACTGGAATTGA+TGG | 0.408030 | 5.1:+1142729 | MS.gene92293:CDS |
| ATTGGTGCTGGCTTTGTCCC+TGG | 0.414143 | 5.1:+1144250 | MS.gene92293:CDS |
| AGTCTATTTAGATACACTAA+TGG | 0.416944 | 5.1:-1142682 | None:intergenic |
| CTCCTTTCATTCCCTTTGCA+GGG | 0.417063 | 5.1:-1143270 | None:intergenic |
| TTTGTTTCTGGGATAGGTAC+TGG | 0.422736 | 5.1:+1143508 | MS.gene92293:CDS |
| GTGGAGAGTCCAGTGCTCTC+AGG | 0.426755 | 5.1:+1143724 | MS.gene92293:CDS |
| TTTCTCTTTATGTAGCTGAT+TGG | 0.431372 | 5.1:+1143691 | MS.gene92293:intron |
| ATTTGTGCTGTGTAGTTGAT+TGG | 0.433507 | 5.1:+1142652 | MS.gene92293:intron |
| CTTTCAAGACTCATTGAAGC+AGG | 0.439398 | 5.1:-1143202 | None:intergenic |
| TTATATACCTTAGGATTGGC+AGG | 0.440849 | 5.1:-1143361 | None:intergenic |
| TCCGTGCCTTTCCATATCTC+TGG | 0.444845 | 5.1:-1143469 | None:intergenic |
| TTTAAGAGCAAGAAGCTTTG+CGG | 0.453369 | 5.1:-1144861 | None:intergenic |
| GGTGGTACCATAACCGGTGC+TGG | 0.455664 | 5.1:+1143529 | MS.gene92293:CDS |
| CCAAAAGGCCAGAAAATTCT+GGG | 0.458163 | 5.1:+1145127 | MS.gene92293:CDS |
| GGTACTGGTGGTACCATAAC+CGG | 0.463243 | 5.1:+1143523 | MS.gene92293:CDS |
| AAGCTTCTTGCTCTTAAAGA+AGG | 0.465193 | 5.1:+1144866 | MS.gene92293:CDS |
| AACATGGCGGTCGAAAGGTC+TGG | 0.479511 | 5.1:+1142526 | None:intergenic |
| AATTATGAGCTTGTATCCCT+TGG | 0.481319 | 5.1:-1143173 | None:intergenic |
| AGCCTTCATGGCAGCAGCCA+AGG | 0.482589 | 5.1:+1143156 | MS.gene92293:CDS |
| TTCAAATTGTTGAAGTATGT+AGG | 0.487581 | 5.1:-1143335 | None:intergenic |
| GCCTTTCCATATCTCTGGAC+CGG | 0.488943 | 5.1:-1143464 | None:intergenic |
| AAGATTCAAGGGATTGGTGC+TGG | 0.499879 | 5.1:+1144238 | MS.gene92293:CDS |
| CCTCACAAGATTCAAGGGAT+TGG | 0.512359 | 5.1:+1144232 | MS.gene92293:CDS |
| TCAGGTCCTCACAAGATTCA+AGG | 0.512591 | 5.1:+1144226 | MS.gene92293:intron |
| AGGTACCTCTCGCCAAAGCT+TGG | 0.513254 | 5.1:-1146055 | None:intergenic |
| TCCCTTGGCTGCTGCCATGA+AGG | 0.514115 | 5.1:-1143158 | None:intergenic |
| CTGATAACATGGCGGTCGAA+AGG | 0.517264 | 5.1:+1142521 | None:intergenic |
| TGGAGAGTCCAGTGCTCTCA+GGG | 0.517606 | 5.1:+1143725 | MS.gene92293:CDS |
| ACAAGTGGTAACACTGGCAT+TGG | 0.517640 | 5.1:+1143130 | MS.gene92293:CDS |
| GCTATTTGAGTCAGTGAGAC+GGG | 0.519281 | 5.1:+1146087 | MS.gene92293:CDS |
| GGGGCTTATCACACCTGGAC+AGG | 0.526431 | 5.1:+1142953 | MS.gene92293:CDS |
| GAGAGCACTGGACTCTCCAC+TGG | 0.526480 | 5.1:-1143721 | None:intergenic |
| AAAGTTATACCAACCTGTCC+AGG | 0.526700 | 5.1:-1142966 | None:intergenic |
| GACGCATTTGTTTCTGGGAT+AGG | 0.530954 | 5.1:+1143502 | MS.gene92293:CDS |
| GACCCTGCAAAGGGAATGAA+AGG | 0.540714 | 5.1:+1143268 | MS.gene92293:CDS |
| CATGCTCTAGTGTAAAAGAC+AGG | 0.541025 | 5.1:+1142755 | MS.gene92293:CDS |
| TGTTGAAGTATGTAGGCATT+GGG | 0.542376 | 5.1:-1143328 | None:intergenic |
| CTTTATGTAGCTGATTGGTG+TGG | 0.542393 | 5.1:+1143696 | MS.gene92293:intron |
| TGAAAACCCTGCCAATCCTA+AGG | 0.544470 | 5.1:+1143354 | MS.gene92293:CDS |
| GAGATATGGAAAGGCACGGA+TGG | 0.545661 | 5.1:+1143472 | MS.gene92293:CDS |
| GATTGCTGATGCAGAAGAGA+AGG | 0.556187 | 5.1:+1142932 | MS.gene92293:CDS |
| GAGAAGGGGCTTATCACACC+TGG | 0.558309 | 5.1:+1142948 | MS.gene92293:CDS |
| CAGGTCCTCACAAGATTCAA+GGG | 0.561138 | 5.1:+1144227 | MS.gene92293:intron |
| GAGTTTATATACCTTAGGAT+TGG | 0.561288 | 5.1:-1143365 | None:intergenic |
| GTGGTACCATAACCGGTGCT+GGG | 0.564241 | 5.1:+1143530 | MS.gene92293:CDS |
| CTGCAATTAAGATAGCCAAA+AGG | 0.568848 | 5.1:+1145112 | MS.gene92293:CDS |
| TTTAAGATATTTCCCAGCAC+CGG | 0.569437 | 5.1:-1143542 | None:intergenic |
| GCCTTCATGGCAGCAGCCAA+GGG | 0.575694 | 5.1:+1143157 | MS.gene92293:CDS |
| ATTGCTGATGCAGAAGAGAA+GGG | 0.577230 | 5.1:+1142933 | MS.gene92293:CDS |
| TGCTATTTGAGTCAGTGAGA+CGG | 0.579355 | 5.1:+1146086 | MS.gene92293:CDS |
| TTGTTGAAGTATGTAGGCAT+TGG | 0.581978 | 5.1:-1143329 | None:intergenic |
| GATTCAGGGCTCGAAAGTCA+TGG | 0.583977 | 5.1:-1146119 | None:intergenic |
| AGATATGGAAAGGCACGGAT+GGG | 0.598941 | 5.1:+1143473 | MS.gene92293:CDS |
| TACCACTTGTTGGTTCAATG+AGG | 0.607547 | 5.1:-1143117 | None:intergenic |
| GTTTCTGGGATAGGTACTGG+TGG | 0.607715 | 5.1:+1143511 | MS.gene92293:CDS |
| TTTCCATATCTCTGGACCGG+TGG | 0.608117 | 5.1:-1143461 | None:intergenic |
| ACTCAAATAGCACAGAGGAT+AGG | 0.611244 | 5.1:-1146075 | None:intergenic |
| AGATTAACTTCTAAGACACC+AGG | 0.618092 | 5.1:-1144268 | None:intergenic |
| TATATACCTTAGGATTGGCA+GGG | 0.625254 | 5.1:-1143360 | None:intergenic |
| TTTGGCTATCTTAATTGCAG+CGG | 0.625545 | 5.1:-1145109 | None:intergenic |
| GAACCAACAAGTGGTAACAC+TGG | 0.632333 | 5.1:+1143124 | MS.gene92293:CDS |
| GTCCTCATTGAACCAACAAG+TGG | 0.633075 | 5.1:+1143115 | MS.gene92293:CDS |
| TAGGTACATTATGAAACCAC+CGG | 0.634628 | 5.1:+1143445 | MS.gene92293:intron |
| TCCAGAGATATGGAAAGGCA+CGG | 0.636334 | 5.1:+1143468 | MS.gene92293:CDS |
| TATCTAAATAGACTTGCAGA+TGG | 0.637010 | 5.1:+1142691 | MS.gene92293:CDS |
| ACCGGTCCAGAGATATGGAA+AGG | 0.637929 | 5.1:+1143463 | MS.gene92293:CDS |
| TCTATTTAGATACACTAATG+GGG | 0.639571 | 5.1:-1142680 | None:intergenic |
| GCTGATTGGTGTGGAACCAG+TGG | 0.641769 | 5.1:+1143705 | MS.gene92293:intron |
| GAGAGTCCAGTGCTCTCAGG+GGG | 0.648364 | 5.1:+1143727 | MS.gene92293:CDS |
| TTGCTGATGCAGAAGAGAAG+GGG | 0.651912 | 5.1:+1142934 | MS.gene92293:CDS |
| CCAATCCCTTGAATCTTGTG+AGG | 0.662558 | 5.1:-1144232 | None:intergenic |
| GATTAACTTCTAAGACACCA+GGG | 0.699313 | 5.1:-1144267 | None:intergenic |
| ATTTGAGTCAGTGAGACGGG+AGG | 0.715909 | 5.1:+1146090 | MS.gene92293:CDS |
| GGAGAGTCCAGTGCTCTCAG+GGG | 0.724433 | 5.1:+1143726 | MS.gene92293:CDS |
| CACTGACTCAAATAGCACAG+AGG | 0.749640 | 5.1:-1146080 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATTACAATTTTATTTT+CGG | - | chr5.1:1144723-1144742 | None:intergenic | 10.0% |
| !! | ATATCACAATTTAAATGAAA+GGG | - | chr5.1:1144578-1144597 | None:intergenic | 15.0% |
| !! | GATATGAAGATTAAAAATTA+AGG | + | chr5.1:1145491-1145510 | MS.gene92293:intron | 15.0% |
| !! | TATATCACAATTTAAATGAA+AGG | - | chr5.1:1144579-1144598 | None:intergenic | 15.0% |
| !!! | AAAAAAAAATATGCACTTTT+TGG | + | chr5.1:1143925-1143944 | MS.gene92293:intron | 15.0% |
| !!! | AAAAAAAATATGCACTTTTT+GGG | + | chr5.1:1143926-1143945 | MS.gene92293:intron | 15.0% |
| !!! | ATCTCTTTAGTATTTTTTAA+CGG | - | chr5.1:1145412-1145431 | None:intergenic | 15.0% |
| !!! | CATTGATTTTTAAAATTTGT+TGG | + | chr5.1:1144395-1144414 | MS.gene92293:intron | 15.0% |
| !!! | TAAACTTTTATGTATTAATG+TGG | + | chr5.1:1143766-1143785 | MS.gene92293:intron | 15.0% |
| !!! | TTTTAATCTTCATATCAAAA+AGG | - | chr5.1:1145487-1145506 | None:intergenic | 15.0% |
| !! | AAAAAAATTAACTAAAGAGC+TGG | + | chr5.1:1145384-1145403 | MS.gene92293:intron | 20.0% |
| !! | AATACTTCAACTAAAAGTTT+AGG | - | chr5.1:1145181-1145200 | None:intergenic | 20.0% |
| !! | AATATCAAAGTAAAGATGTT+TGG | - | chr5.1:1145054-1145073 | None:intergenic | 20.0% |
| !! | ACATGCAAAACAAATATTAA+TGG | - | chr5.1:1143071-1143090 | None:intergenic | 20.0% |
| !! | ATACTTCAACTAAAAGTTTA+GGG | - | chr5.1:1145180-1145199 | None:intergenic | 20.0% |
| !! | ATATAAACTCATTTGTTCTA+TGG | + | chr5.1:1143378-1143397 | MS.gene92293:intron | 20.0% |
| !! | ATATATATTGTTACCATTGT+AGG | + | chr5.1:1143426-1143445 | MS.gene92293:intron | 20.0% |
| !! | ATTTCAGATTAACATCTAAT+CGG | - | chr5.1:1145881-1145900 | None:intergenic | 20.0% |
| !! | GATAAAACTAACCTTTATAT+TGG | - | chr5.1:1143578-1143597 | None:intergenic | 20.0% |
| !! | TAAATTGTGATATAAACTTG+AGG | + | chr5.1:1144585-1144604 | MS.gene92293:intron | 20.0% |
| !! | TTAACCATAAATGTGTAATT+TGG | + | chr5.1:1144810-1144829 | MS.gene92293:intron | 20.0% |
| !!! | ATTAATATTTGTTTTGCATG+TGG | + | chr5.1:1143070-1143089 | MS.gene92293:intron | 20.0% |
| !!! | CATACATCACTATTTTTTTA+AGG | - | chr5.1:1144374-1144393 | None:intergenic | 20.0% |
| !!! | CTTTACTTTGATATTTTTGT+AGG | + | chr5.1:1145059-1145078 | MS.gene92293:intron | 20.0% |
| !!! | GATGTTATTTAAGGATAAAA+TGG | + | chr5.1:1143835-1143854 | MS.gene92293:intron | 20.0% |
| !!! | TTAATATTTGTTTTGCATGT+GGG | + | chr5.1:1143071-1143090 | MS.gene92293:intron | 20.0% |
| !!! | TTACAAGTTGATGTTATTTA+AGG | + | chr5.1:1143826-1143845 | MS.gene92293:intron | 20.0% |
| !!! | TTAGATGTTAATCTGAAATA+TGG | + | chr5.1:1145882-1145901 | MS.gene92293:intron | 20.0% |
| ! | AAACTGGAAAAAAGAAATGT+AGG | - | chr5.1:1145022-1145041 | None:intergenic | 25.0% |
| ! | AATCTTGTATAACGAAACAT+CGG | - | chr5.1:1145982-1146001 | None:intergenic | 25.0% |
| ! | AATTGATGTGTTGTATTAGA+AGG | + | chr5.1:1144736-1144755 | MS.gene92293:intron | 25.0% |
| ! | ACAATTAGATGCAAAAACTA+TGG | - | chr5.1:1144465-1144484 | None:intergenic | 25.0% |
| ! | ACCATATCTAAATGTAATAG+TGG | - | chr5.1:1145576-1145595 | None:intergenic | 25.0% |
| ! | AGAGCAAAATTCCAATATAA+AGG | + | chr5.1:1143564-1143583 | MS.gene92293:CDS | 25.0% |
| ! | AGTCTATTTAGATACACTAA+TGG | - | chr5.1:1142685-1142704 | None:intergenic | 25.0% |
| ! | ATAAAAGTTTATAACTCACC+AGG | - | chr5.1:1143757-1143776 | None:intergenic | 25.0% |
| ! | ATCTTCCTAAGTATATGTTT+GGG | + | chr5.1:1143595-1143614 | MS.gene92293:intron | 25.0% |
| ! | ATGATGACAACATGAAATTA+CGG | + | chr5.1:1145451-1145470 | MS.gene92293:intron | 25.0% |
| ! | ATGTTATATATTTGACATGC+AGG | + | chr5.1:1142895-1142914 | MS.gene92293:intron | 25.0% |
| ! | ATTTAAGGATAAAATGGAAG+AGG | + | chr5.1:1143841-1143860 | MS.gene92293:intron | 25.0% |
| ! | CAAATGAGTTTATATACCTT+AGG | - | chr5.1:1143373-1143392 | None:intergenic | 25.0% |
| ! | CTATTACATTTAGATATGGT+TGG | + | chr5.1:1145576-1145595 | MS.gene92293:intron | 25.0% |
| ! | CTTTATTGAATTCGAACTTT+CGG | - | chr5.1:1145809-1145828 | None:intergenic | 25.0% |
| ! | GAGAATCTTCTTTCAATATT+TGG | - | chr5.1:1144081-1144100 | None:intergenic | 25.0% |
| ! | GTCTATTTAGATACACTAAT+GGG | - | chr5.1:1142684-1142703 | None:intergenic | 25.0% |
| ! | TAACATAATCGTTAAGCATA+CGG | + | chr5.1:1145236-1145255 | MS.gene92293:intron | 25.0% |
| ! | TAATCTTTGCATTATTCAAG+AGG | + | chr5.1:1144332-1144351 | MS.gene92293:intron | 25.0% |
| ! | TATCTTCCTAAGTATATGTT+TGG | + | chr5.1:1143594-1143613 | MS.gene92293:intron | 25.0% |
| ! | TCCACTATTACATTTAGATA+TGG | + | chr5.1:1145572-1145591 | MS.gene92293:intron | 25.0% |
| ! | TCTATTTAGATACACTAATG+GGG | - | chr5.1:1142683-1142702 | None:intergenic | 25.0% |
| ! | TGTTTCGTTATACAAGATTA+TGG | + | chr5.1:1145983-1146002 | MS.gene92293:intron | 25.0% |
| ! | TTCAAATTGTTGAAGTATGT+AGG | - | chr5.1:1143338-1143357 | None:intergenic | 25.0% |
| ! | TTCGACAAAGTAGATATTAA+GGG | - | chr5.1:1144947-1144966 | None:intergenic | 25.0% |
| !! | AAGGCTGTAATTTTATGTTT+TGG | - | chr5.1:1145730-1145749 | None:intergenic | 25.0% |
| !! | TAGATAGAAATGTTAGTTTC+CGG | - | chr5.1:1145346-1145365 | None:intergenic | 25.0% |
| !! | TAGGTTTAGAACTTACAAAT+AGG | - | chr5.1:1144892-1144911 | None:intergenic | 25.0% |
| !! | TATATATTGATCAAAGTGTC+AGG | - | chr5.1:1143413-1143432 | None:intergenic | 25.0% |
| !!! | ACTTTGATATTTTTGTAGGT+GGG | + | chr5.1:1145063-1145082 | MS.gene92293:intron | 25.0% |
| !!! | AGAATCATTCTATTAGCTTT+TGG | + | chr5.1:1143226-1143245 | MS.gene92293:CDS | 25.0% |
| !!! | AGTAACTCCTAAAGTTTTTT+AGG | - | chr5.1:1143892-1143911 | None:intergenic | 25.0% |
| !!! | ATCGTTATGAGTATTGATTT+TGG | + | chr5.1:1142792-1142811 | MS.gene92293:intron | 25.0% |
| !!! | CATCACTATTTTTTTAAGGA+TGG | - | chr5.1:1144370-1144389 | None:intergenic | 25.0% |
| !!! | GAACTTTTTTTGTAATTGGT+TGG | + | chr5.1:1144964-1144983 | MS.gene92293:intron | 25.0% |
| !!! | TACTTTGATATTTTTGTAGG+TGG | + | chr5.1:1145062-1145081 | MS.gene92293:intron | 25.0% |
| !!! | TGTCGAACTTTTTTTGTAAT+TGG | + | chr5.1:1144960-1144979 | MS.gene92293:intron | 25.0% |
| !!! | TTACCAATTTTGTCGTTTTA+TGG | - | chr5.1:1145219-1145238 | None:intergenic | 25.0% |
| AAAATTGACGCATTTGTTTC+TGG | + | chr5.1:1143496-1143515 | MS.gene92293:CDS | 30.0% | |
| AAGTAAGCTTAAACAACTTG+TGG | + | chr5.1:1144308-1144327 | MS.gene92293:intron | 30.0% | |
| AGGAAGACCTAAAAAACTTT+AGG | + | chr5.1:1143882-1143901 | MS.gene92293:intron | 30.0% | |
| ATACATTGTTTACCTTGACT+TGG | + | chr5.1:1144507-1144526 | MS.gene92293:intron | 30.0% | |
| ATATATTTGACATGCAGGAT+TGG | + | chr5.1:1142900-1142919 | MS.gene92293:intron | 30.0% | |
| ATCAGACAAGAATACGTTAA+GGG | - | chr5.1:1142632-1142651 | None:intergenic | 30.0% | |
| ATGTTGTCTACAGTTTGATA+AGG | + | chr5.1:1144421-1144440 | MS.gene92293:intron | 30.0% | |
| ATTCAATAAAGAAATGCTGC+AGG | + | chr5.1:1145818-1145837 | MS.gene92293:intron | 30.0% | |
| ATTTCATGTTGTCATCATTG+TGG | - | chr5.1:1145449-1145468 | None:intergenic | 30.0% | |
| GAGTTTATATACCTTAGGAT+TGG | - | chr5.1:1143368-1143387 | None:intergenic | 30.0% | |
| GTTCCATAAAACGACAAAAT+TGG | + | chr5.1:1145213-1145232 | MS.gene92293:intron | 30.0% | |
| GTTCGACAAAGTAGATATTA+AGG | - | chr5.1:1144948-1144967 | None:intergenic | 30.0% | |
| GTTTCATAATGTACCTACAA+TGG | - | chr5.1:1143442-1143461 | None:intergenic | 30.0% | |
| TATCAGACAAGAATACGTTA+AGG | - | chr5.1:1142633-1142652 | None:intergenic | 30.0% | |
| TATCTAAATAGACTTGCAGA+TGG | + | chr5.1:1142691-1142710 | MS.gene92293:CDS | 30.0% | |
| TCTGCCAAATTACACATTTA+TGG | - | chr5.1:1144817-1144836 | None:intergenic | 30.0% | |
| TCTTCTTTCAATATTTGGAC+AGG | - | chr5.1:1144076-1144095 | None:intergenic | 30.0% | |
| TGTTTGGTAAACTACAAAAC+TGG | - | chr5.1:1145038-1145057 | None:intergenic | 30.0% | |
| TTTCTCTTTATGTAGCTGAT+TGG | + | chr5.1:1143691-1143710 | MS.gene92293:intron | 30.0% | |
| ! | AAATTGACGCATTTGTTTCT+GGG | + | chr5.1:1143497-1143516 | MS.gene92293:CDS | 30.0% |
| ! | ACTAGAATTGTGTTTGAGAT+TGG | + | chr5.1:1142839-1142858 | MS.gene92293:intron | 30.0% |
| ! | AGATAGAAATGTTAGTTTCC+GGG | - | chr5.1:1145345-1145364 | None:intergenic | 30.0% |
| !! | AATATGCACTTCTCTGAAAT+TGG | + | chr5.1:1143970-1143989 | MS.gene92293:intron | 30.0% |
| !! | AGTAGTATTTTGCCACTTAT+TGG | + | chr5.1:1144534-1144553 | MS.gene92293:intron | 30.0% |
| !! | ATATGCACTTCTCTGAAATT+GGG | + | chr5.1:1143971-1143990 | MS.gene92293:intron | 30.0% |
| !! | GTTAATGTTCCATTTTGACA+TGG | + | chr5.1:1146018-1146037 | MS.gene92293:intron | 30.0% |
| AAATGAAAGGGTTCTCAAAC+TGG | - | chr5.1:1144566-1144585 | None:intergenic | 35.0% | |
| AAGCTTCTTGCTCTTAAAGA+AGG | + | chr5.1:1144866-1144885 | MS.gene92293:CDS | 35.0% | |
| AATTATGAGCTTGTATCCCT+TGG | - | chr5.1:1143176-1143195 | None:intergenic | 35.0% | |
| ACTCATTTGTTCTATGGCAA+TGG | + | chr5.1:1143384-1143403 | MS.gene92293:intron | 35.0% | |
| AGTCATGCCATCAATGAATT+CGG | + | chr5.1:1145607-1145626 | MS.gene92293:intron | 35.0% | |
| ATACTACTTCAACCAAGTCA+AGG | - | chr5.1:1144522-1144541 | None:intergenic | 35.0% | |
| ATGGAAGAGGATCTGATTAA+AGG | + | chr5.1:1143854-1143873 | MS.gene92293:intron | 35.0% | |
| ATTTGTGCTGTGTAGTTGAT+TGG | + | chr5.1:1142652-1142671 | MS.gene92293:intron | 35.0% | |
| CCATAGAAAAAGCTATAAGC+TGG | + | chr5.1:1144025-1144044 | MS.gene92293:intron | 35.0% | |
| CTCTTGACTTTGTAAATGTG+TGG | + | chr5.1:1145767-1145786 | MS.gene92293:intron | 35.0% | |
| CTGAGCTAAAAAATAGCGAT+CGG | - | chr5.1:1142604-1142623 | None:intergenic | 35.0% | |
| CTGCAATTAAGATAGCCAAA+AGG | + | chr5.1:1145112-1145131 | MS.gene92293:CDS | 35.0% | |
| CTTGTCCCAAACATATACTT+AGG | - | chr5.1:1143603-1143622 | None:intergenic | 35.0% | |
| GTGCATTCTATGAAATGTTG+TGG | + | chr5.1:1143018-1143037 | MS.gene92293:intron | 35.0% | |
| TAGGTACATTATGAAACCAC+CGG | + | chr5.1:1143445-1143464 | MS.gene92293:intron | 35.0% | |
| TATTGAATTCGAACTTTCGG+TGG | - | chr5.1:1145806-1145825 | None:intergenic | 35.0% | |
| TGATTATGTGCTTGTTTGGT+TGG | + | chr5.1:1142868-1142887 | MS.gene92293:intron | 35.0% | |
| TGGAAGAGGATCTGATTAAA+GGG | + | chr5.1:1143855-1143874 | MS.gene92293:intron | 35.0% | |
| TGTCTACAGTTTGATAAGGT+GGG | + | chr5.1:1144425-1144444 | MS.gene92293:intron | 35.0% | |
| TGTTGAAGTATGTAGGCATT+GGG | - | chr5.1:1143331-1143350 | None:intergenic | 35.0% | |
| TTCGTGATTATGTGCTTGTT+TGG | + | chr5.1:1142864-1142883 | MS.gene92293:intron | 35.0% | |
| TTGTCTACAGTTTGATAAGG+TGG | + | chr5.1:1144424-1144443 | MS.gene92293:intron | 35.0% | |
| TTGTTGAAGTATGTAGGCAT+TGG | - | chr5.1:1143332-1143351 | None:intergenic | 35.0% | |
| TTTAAGAGCAAGAAGCTTTG+CGG | - | chr5.1:1144864-1144883 | None:intergenic | 35.0% | |
| TTTGGCTATCTTAATTGCAG+CGG | - | chr5.1:1145112-1145131 | None:intergenic | 35.0% | |
| ! | ATAAGCTTCCCAGAATTTTC+TGG | - | chr5.1:1145138-1145157 | None:intergenic | 35.0% |
| ! | GATAGAAATGTTAGTTTCCG+GGG | - | chr5.1:1145344-1145363 | None:intergenic | 35.0% |
| ! | GATTAGTCAAAGGATCAGTT+AGG | - | chr5.1:1144181-1144200 | None:intergenic | 35.0% |
| ! | GGTGTCGAGAAAAATTTACA+AGG | - | chr5.1:1144141-1144160 | None:intergenic | 35.0% |
| ! | TAAGGGACATTCAAGGATTT+TGG | + | chr5.1:1145299-1145318 | MS.gene92293:intron | 35.0% |
| ! | TATATACCTTAGGATTGGCA+GGG | - | chr5.1:1143363-1143382 | None:intergenic | 35.0% |
| ! | TTATATACCTTAGGATTGGC+AGG | - | chr5.1:1143364-1143383 | None:intergenic | 35.0% |
| ! | TTTAAGATATTTCCCAGCAC+CGG | - | chr5.1:1143545-1143564 | None:intergenic | 35.0% |
| !! | AAGTTTTGTGTTCCTTGATG+CGG | + | chr5.1:1142573-1142592 | MS.gene92293:intron | 35.0% |
| !! | ACTCTTAGCTGTTTCTACAT+AGG | - | chr5.1:1144911-1144930 | None:intergenic | 35.0% |
| !! | AGATTAACTTCTAAGACACC+AGG | - | chr5.1:1144271-1144290 | None:intergenic | 35.0% |
| !! | CCAGCTTATAGCTTTTTCTA+TGG | - | chr5.1:1144028-1144047 | None:intergenic | 35.0% |
| !! | GATTAACTTCTAAGACACCA+GGG | - | chr5.1:1144270-1144289 | None:intergenic | 35.0% |
| !!! | ATTAGCTTTTGGAGCTGAAT+TGG | + | chr5.1:1143237-1143256 | MS.gene92293:CDS | 35.0% |
| !!! | CAAAAGTGCTTTTAAGAGCA+AGG | - | chr5.1:1144675-1144694 | None:intergenic | 35.0% |
| AAAGTTATACCAACCTGTCC+AGG | - | chr5.1:1142969-1142988 | None:intergenic | 40.0% | |
| AACTGGAAATGGCCAATAAG+TGG | - | chr5.1:1144549-1144568 | None:intergenic | 40.0% | |
| AAGGGTTCTCAAACTGGAAA+TGG | - | chr5.1:1144560-1144579 | None:intergenic | 40.0% | |
| ACTCAAATAGCACAGAGGAT+AGG | - | chr5.1:1146078-1146097 | None:intergenic | 40.0% | |
| AGCTTGAAGTTGTTGGATCA+AGG | - | chr5.1:1145749-1145768 | None:intergenic | 40.0% | |
| AGGACATCCGAATTCATTGA+TGG | - | chr5.1:1145617-1145636 | None:intergenic | 40.0% | |
| AGTCAAGAGCTTGAAGTTGT+TGG | - | chr5.1:1145756-1145775 | None:intergenic | 40.0% | |
| ATAAGCTGGAAAGACTGTGT+TGG | + | chr5.1:1144039-1144058 | MS.gene92293:intron | 40.0% | |
| ATTGCTGATGCAGAAGAGAA+GGG | + | chr5.1:1142933-1142952 | MS.gene92293:CDS | 40.0% | |
| CAATAAAGAAATGCTGCAGG+TGG | + | chr5.1:1145821-1145840 | MS.gene92293:intron | 40.0% | |
| CATGCTCTAGTGTAAAAGAC+AGG | + | chr5.1:1142755-1142774 | MS.gene92293:CDS | 40.0% | |
| CCAAAAGGCCAGAAAATTCT+GGG | + | chr5.1:1145127-1145146 | MS.gene92293:CDS | 40.0% | |
| CTTTATGTAGCTGATTGGTG+TGG | + | chr5.1:1143696-1143715 | MS.gene92293:intron | 40.0% | |
| CTTTCAAGACTCATTGAAGC+AGG | - | chr5.1:1143205-1143224 | None:intergenic | 40.0% | |
| CTTTCAATATTTGGACAGGC+AGG | - | chr5.1:1144072-1144091 | None:intergenic | 40.0% | |
| GGAAGAGGATCTGATTAAAG+GGG | + | chr5.1:1143856-1143875 | MS.gene92293:intron | 40.0% | |
| TAAGCTGGAAAGACTGTGTT+GGG | + | chr5.1:1144040-1144059 | MS.gene92293:intron | 40.0% | |
| TAGGTCAACCGATCATGAAA+TGG | - | chr5.1:1144162-1144181 | None:intergenic | 40.0% | |
| TCAAAAAGCTGAAGAGCTGT+TGG | + | chr5.1:1143297-1143316 | MS.gene92293:CDS | 40.0% | |
| TCCTACTCGAAACTTTCCTA+GGG | - | chr5.1:1144634-1144653 | None:intergenic | 40.0% | |
| TCTCGACACCATTTCATGAT+CGG | + | chr5.1:1144151-1144170 | MS.gene92293:intron | 40.0% | |
| TGCTGCAAAACTGGAATTGA+TGG | + | chr5.1:1142729-1142748 | MS.gene92293:CDS | 40.0% | |
| TTAGCCAGTTCTTAAGCTAC+AGG | - | chr5.1:1145909-1145928 | None:intergenic | 40.0% | |
| TTGTAGGTGGGAATATCTTC+TGG | + | chr5.1:1145075-1145094 | MS.gene92293:intron | 40.0% | |
| TTTAAGAGCAAGGAGCAAAC+TGG | - | chr5.1:1144665-1144684 | None:intergenic | 40.0% | |
| ! | AAGGATCGGTGATTAGTCAA+AGG | - | chr5.1:1144191-1144210 | None:intergenic | 40.0% |
| ! | ATCTAATCGGTTCCATTAGC+GGG | - | chr5.1:1145868-1145887 | None:intergenic | 40.0% |
| ! | ATTCCAGTTTTGCAGCAACT+CGG | - | chr5.1:1142726-1142745 | None:intergenic | 40.0% |
| ! | CATCTAATCGGTTCCATTAG+CGG | - | chr5.1:1145869-1145888 | None:intergenic | 40.0% |
| ! | CTGTCTTTTACACTAGAGCA+TGG | - | chr5.1:1142757-1142776 | None:intergenic | 40.0% |
| ! | TGCTATTTGAGTCAGTGAGA+CGG | + | chr5.1:1146086-1146105 | MS.gene92293:CDS | 40.0% |
| !! | ACATTCAAGGATTTTGGAGG+AGG | + | chr5.1:1145305-1145324 | MS.gene92293:intron | 40.0% |
| !! | ACTTCTCTGAAATTGGGTCA+TGG | + | chr5.1:1143977-1143996 | MS.gene92293:intron | 40.0% |
| !! | TACCACTTGTTGGTTCAATG+AGG | - | chr5.1:1143120-1143139 | None:intergenic | 40.0% |
| !! | TGGTTGGTAATGTGATCTGA+GGG | + | chr5.1:1144980-1144999 | MS.gene92293:intron | 40.0% |
| !! | TTGGTTGGTAATGTGATCTG+AGG | + | chr5.1:1144979-1144998 | MS.gene92293:intron | 40.0% |
| !! | TTTGTTTCTGGGATAGGTAC+TGG | + | chr5.1:1143508-1143527 | MS.gene92293:CDS | 40.0% |
| AAGAAATGCTGCAGGTGGTA+TGG | + | chr5.1:1145826-1145845 | MS.gene92293:intron | 45.0% | |
| ACAAGTGGTAACACTGGCAT+TGG | + | chr5.1:1143130-1143149 | MS.gene92293:CDS | 45.0% | |
| ATGCCAGTGTTACCACTTGT+TGG | - | chr5.1:1143130-1143149 | None:intergenic | 45.0% | |
| ATTCCACATAGTTGGCAGCT+TGG | + | chr5.1:1145647-1145666 | MS.gene92293:intron | 45.0% | |
| CAACTATGTGGAATCTCAGG+CGG | - | chr5.1:1145641-1145660 | None:intergenic | 45.0% | |
| CAGGTCCTCACAAGATTCAA+GGG | + | chr5.1:1144227-1144246 | MS.gene92293:intron | 45.0% | |
| CATTCACAGCAGCAAAGGAT+CGG | - | chr5.1:1144205-1144224 | None:intergenic | 45.0% | |
| CCAATCCCTTGAATCTTGTG+AGG | - | chr5.1:1144235-1144254 | None:intergenic | 45.0% | |
| CCTCACAAGATTCAAGGGAT+TGG | + | chr5.1:1144232-1144251 | MS.gene92293:CDS | 45.0% | |
| CTATGCTTATCCTCTTCCCT+AGG | + | chr5.1:1144615-1144634 | MS.gene92293:intron | 45.0% | |
| CTCCTACTCGAAACTTTCCT+AGG | - | chr5.1:1144635-1144654 | None:intergenic | 45.0% | |
| CTCCTTTCATTCCCTTTGCA+GGG | - | chr5.1:1143273-1143292 | None:intergenic | 45.0% | |
| CTGAACATTCACAGCAGCAA+AGG | - | chr5.1:1144210-1144229 | None:intergenic | 45.0% | |
| CTTTGCTGCTGTGAATGTTC+AGG | + | chr5.1:1144208-1144227 | MS.gene92293:intron | 45.0% | |
| GAACCAACAAGTGGTAACAC+TGG | + | chr5.1:1143124-1143143 | MS.gene92293:CDS | 45.0% | |
| GATTGCTGATGCAGAAGAGA+AGG | + | chr5.1:1142932-1142951 | MS.gene92293:CDS | 45.0% | |
| GCCAAAAGGCCAGAAAATTC+TGG | + | chr5.1:1145126-1145145 | MS.gene92293:CDS | 45.0% | |
| GCTATTTGAGTCAGTGAGAC+GGG | + | chr5.1:1146087-1146106 | MS.gene92293:CDS | 45.0% | |
| GTACCTTAAGAACCCGCTAA+TGG | + | chr5.1:1145853-1145872 | MS.gene92293:intron | 45.0% | |
| GTCCTCATTGAACCAACAAG+TGG | + | chr5.1:1143115-1143134 | MS.gene92293:CDS | 45.0% | |
| TCAGGTCCTCACAAGATTCA+AGG | + | chr5.1:1144226-1144245 | MS.gene92293:intron | 45.0% | |
| TCCAGAGATATGGAAAGGCA+CGG | + | chr5.1:1143468-1143487 | MS.gene92293:CDS | 45.0% | |
| TCGAAACTTTCCTAGGGAAG+AGG | - | chr5.1:1144628-1144647 | None:intergenic | 45.0% | |
| TGAAAACCCTGCCAATCCTA+AGG | + | chr5.1:1143354-1143373 | MS.gene92293:CDS | 45.0% | |
| TGCCAACTATGTGGAATCTC+AGG | - | chr5.1:1145644-1145663 | None:intergenic | 45.0% | |
| TGGTCCTGTAGCTTAAGAAC+TGG | + | chr5.1:1145902-1145921 | MS.gene92293:intron | 45.0% | |
| TTGCTGATGCAGAAGAGAAG+GGG | + | chr5.1:1142934-1142953 | MS.gene92293:CDS | 45.0% | |
| ! | AAGATTCAAGGGATTGGTGC+TGG | + | chr5.1:1144238-1144257 | MS.gene92293:CDS | 45.0% |
| ! | AGATATGGAAAGGCACGGAT+GGG | + | chr5.1:1143473-1143492 | MS.gene92293:CDS | 45.0% |
| ! | GGGACATTCAAGGATTTTGG+AGG | + | chr5.1:1145302-1145321 | MS.gene92293:intron | 45.0% |
| ! | TAGGTAGCTTGGTGAGCTAA+GGG | + | chr5.1:1145282-1145301 | MS.gene92293:intron | 45.0% |
| ! | TCCCTAGGAAAGTTTCGAGT+AGG | + | chr5.1:1144630-1144649 | MS.gene92293:intron | 45.0% |
| ! | TTCCAGTTTTGCAGCAACTC+GGG | - | chr5.1:1142725-1142744 | None:intergenic | 45.0% |
| !! | ATATTTCCCAGCACCGGTTA+TGG | - | chr5.1:1143539-1143558 | None:intergenic | 45.0% |
| !! | CACTGACTCAAATAGCACAG+AGG | - | chr5.1:1146083-1146102 | None:intergenic | 45.0% |
| !! | CCCAGAATTTTCTGGCCTTT+TGG | - | chr5.1:1145130-1145149 | None:intergenic | 45.0% |
| !! | GACGCATTTGTTTCTGGGAT+AGG | + | chr5.1:1143502-1143521 | MS.gene92293:CDS | 45.0% |
| !! | GGTTGGTAATGTGATCTGAG+GGG | + | chr5.1:1144981-1145000 | MS.gene92293:intron | 45.0% |
| !! | GTTCCATTAGCGGGTTCTTA+AGG | - | chr5.1:1145859-1145878 | None:intergenic | 45.0% |
| !! | GTTCCATTTTGACATGGTGC+AGG | + | chr5.1:1146024-1146043 | MS.gene92293:intron | 45.0% |
| !! | GTTTTGACAGACCCTGCAAA+GGG | + | chr5.1:1143259-1143278 | MS.gene92293:CDS | 45.0% |
| !! | TGGCATTGGATTAGCCTTCA+TGG | + | chr5.1:1143144-1143163 | MS.gene92293:CDS | 45.0% |
| !! | TTTTTCCAAGCTTTGGCGAG+AGG | + | chr5.1:1146050-1146069 | MS.gene92293:CDS | 45.0% |
| !!! | CAGGTCGTTTTTCCAAGCTT+TGG | + | chr5.1:1146043-1146062 | MS.gene92293:intron | 45.0% |
| !!! | TTAGTTAATTTTTTTTTAAT+AGG | - | chr5.1:1145379-1145398 | None:intergenic | 5.0% |
| AAACCACCGGTCCAGAGATA+TGG | + | chr5.1:1143458-1143477 | MS.gene92293:CDS | 50.0% | |
| ACCGGTCCAGAGATATGGAA+AGG | + | chr5.1:1143463-1143482 | MS.gene92293:CDS | 50.0% | |
| AGTTTCCGGGGATGAAACCT+GGG | - | chr5.1:1145332-1145351 | None:intergenic | 50.0% | |
| ATGAAGAGCTAGTCCCACGT+AGG | + | chr5.1:1145263-1145282 | MS.gene92293:intron | 50.0% | |
| ATTTGAGTCAGTGAGACGGG+AGG | + | chr5.1:1146090-1146109 | MS.gene92293:CDS | 50.0% | |
| CGACCTGCACCATGTCAAAA+TGG | - | chr5.1:1146030-1146049 | None:intergenic | 50.0% | |
| CGATCGGAAAATCCGCATCA+AGG | - | chr5.1:1142588-1142607 | None:intergenic | 50.0% | |
| CGCCTGAGATTCCACATAGT+TGG | + | chr5.1:1145639-1145658 | MS.gene92293:intron | 50.0% | |
| CTTATCACACCTGGACAGGT+TGG | + | chr5.1:1142957-1142976 | MS.gene92293:intron | 50.0% | |
| GACCCTGCAAAGGGAATGAA+AGG | + | chr5.1:1143268-1143287 | MS.gene92293:CDS | 50.0% | |
| GCCTTTCCATATCTCTGGAC+CGG | - | chr5.1:1143467-1143486 | None:intergenic | 50.0% | |
| GCTCCTTTCATTCCCTTTGC+AGG | - | chr5.1:1143274-1143293 | None:intergenic | 50.0% | |
| GGATCTGATTAAAGGGGCAG+AGG | + | chr5.1:1143862-1143881 | MS.gene92293:intron | 50.0% | |
| GGTGAGCTAAGGGACATTCA+AGG | + | chr5.1:1145292-1145311 | MS.gene92293:intron | 50.0% | |
| TAGTTTCCGGGGATGAAACC+TGG | - | chr5.1:1145333-1145352 | None:intergenic | 50.0% | |
| TATGTGGAATCTCAGGCGGT+AGG | - | chr5.1:1145637-1145656 | None:intergenic | 50.0% | |
| TCCGTGCCTTTCCATATCTC+TGG | - | chr5.1:1143472-1143491 | None:intergenic | 50.0% | |
| TTTCCATATCTCTGGACCGG+TGG | - | chr5.1:1143464-1143483 | None:intergenic | 50.0% | |
| ! | GAGATATGGAAAGGCACGGA+TGG | + | chr5.1:1143472-1143491 | MS.gene92293:CDS | 50.0% |
| ! | GTAGGTAGCTTGGTGAGCTA+AGG | + | chr5.1:1145281-1145300 | MS.gene92293:intron | 50.0% |
| !! | GGTACTGGTGGTACCATAAC+CGG | + | chr5.1:1143523-1143542 | MS.gene92293:CDS | 50.0% |
| !! | GGTTTTGACAGACCCTGCAA+AGG | + | chr5.1:1143258-1143277 | MS.gene92293:CDS | 50.0% |
| !! | GTTTCTGGGATAGGTACTGG+TGG | + | chr5.1:1143511-1143530 | MS.gene92293:CDS | 50.0% |
| AGCTCACCAAGCTACCTACG+TGG | - | chr5.1:1145280-1145299 | None:intergenic | 55.0% | |
| AGGTACCTCTCGCCAAAGCT+TGG | - | chr5.1:1146058-1146077 | None:intergenic | 55.0% | |
| AGTTGGCAGCTTGGAGCTGT+TGG | + | chr5.1:1145656-1145675 | MS.gene92293:intron | 55.0% | |
| CTAGTCCCACGTAGGTAGCT+TGG | + | chr5.1:1145271-1145290 | MS.gene92293:intron | 55.0% | |
| GAGAAGGGGCTTATCACACC+TGG | + | chr5.1:1142948-1142967 | MS.gene92293:CDS | 55.0% | |
| GCTCACCAAGCTACCTACGT+GGG | - | chr5.1:1145279-1145298 | None:intergenic | 55.0% | |
| GCTCCAAGCTGCCAACTATG+TGG | - | chr5.1:1145653-1145672 | None:intergenic | 55.0% | |
| GCTGATTGGTGTGGAACCAG+TGG | + | chr5.1:1143705-1143724 | MS.gene92293:intron | 55.0% | |
| GTGGTACCATAACCGGTGCT+GGG | + | chr5.1:1143530-1143549 | MS.gene92293:CDS | 55.0% | |
| TGCCCGAGTTGCTGCAAAAC+TGG | + | chr5.1:1142720-1142739 | MS.gene92293:CDS | 55.0% | |
| TGGAGAGTCCAGTGCTCTCA+GGG | + | chr5.1:1143725-1143744 | MS.gene92293:CDS | 55.0% | |
| !! | AGGATTTTGGAGGAGGTCCC+AGG | + | chr5.1:1145312-1145331 | MS.gene92293:intron | 55.0% |
| !! | ATTGGTGCTGGCTTTGTCCC+TGG | + | chr5.1:1144250-1144269 | MS.gene92293:CDS | 55.0% |
| AGCCTTCATGGCAGCAGCCA+AGG | + | chr5.1:1143156-1143175 | MS.gene92293:CDS | 60.0% | |
| GAGAGTCCAGTGCTCTCAGG+GGG | + | chr5.1:1143727-1143746 | MS.gene92293:CDS | 60.0% | |
| GAGGTCCCAGGTTTCATCCC+CGG | + | chr5.1:1145324-1145343 | MS.gene92293:intron | 60.0% | |
| GCCTTCATGGCAGCAGCCAA+GGG | + | chr5.1:1143157-1143176 | MS.gene92293:CDS | 60.0% | |
| GGAGAGTCCAGTGCTCTCAG+GGG | + | chr5.1:1143726-1143745 | MS.gene92293:CDS | 60.0% | |
| GGGGCTTATCACACCTGGAC+AGG | + | chr5.1:1142953-1142972 | MS.gene92293:CDS | 60.0% | |
| GGTGGTACCATAACCGGTGC+TGG | + | chr5.1:1143529-1143548 | MS.gene92293:CDS | 60.0% | |
| GTGCTCTCAGGGGGAAAACC+TGG | + | chr5.1:1143736-1143755 | MS.gene92293:CDS | 60.0% | |
| GTGGAGAGTCCAGTGCTCTC+AGG | + | chr5.1:1143724-1143743 | MS.gene92293:CDS | 60.0% | |
| TCCCTTGGCTGCTGCCATGA+AGG | - | chr5.1:1143161-1143180 | None:intergenic | 60.0% | |
| !! | GAGAGCACTGGACTCTCCAC+TGG | - | chr5.1:1143724-1143743 | None:intergenic | 60.0% |
| !! | GGTTTTCCCCCTGAGAGCAC+TGG | - | chr5.1:1143736-1143755 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 1142529 | 1146138 | 1142529 | ID=MS.gene92293 |
| chr5.1 | mRNA | 1142529 | 1146138 | 1142529 | ID=MS.gene92293.t1;Parent=MS.gene92293 |
| chr5.1 | exon | 1142529 | 1142570 | 1142529 | ID=MS.gene92293.t1.exon1;Parent=MS.gene92293.t1 |
| chr5.1 | CDS | 1142529 | 1142570 | 1142529 | ID=cds.MS.gene92293.t1;Parent=MS.gene92293.t1 |
| chr5.1 | exon | 1142667 | 1142776 | 1142667 | ID=MS.gene92293.t1.exon2;Parent=MS.gene92293.t1 |
| chr5.1 | CDS | 1142667 | 1142776 | 1142667 | ID=cds.MS.gene92293.t1;Parent=MS.gene92293.t1 |
| chr5.1 | exon | 1142917 | 1142974 | 1142917 | ID=MS.gene92293.t1.exon3;Parent=MS.gene92293.t1 |
| chr5.1 | CDS | 1142917 | 1142974 | 1142917 | ID=cds.MS.gene92293.t1;Parent=MS.gene92293.t1 |
| chr5.1 | exon | 1143112 | 1143375 | 1143112 | ID=MS.gene92293.t1.exon4;Parent=MS.gene92293.t1 |
| chr5.1 | CDS | 1143112 | 1143375 | 1143112 | ID=cds.MS.gene92293.t1;Parent=MS.gene92293.t1 |
| chr5.1 | exon | 1143448 | 1143585 | 1143448 | ID=MS.gene92293.t1.exon5;Parent=MS.gene92293.t1 |
| chr5.1 | CDS | 1143448 | 1143585 | 1143448 | ID=cds.MS.gene92293.t1;Parent=MS.gene92293.t1 |
| chr5.1 | exon | 1143706 | 1143757 | 1143706 | ID=MS.gene92293.t1.exon6;Parent=MS.gene92293.t1 |
| chr5.1 | CDS | 1143706 | 1143757 | 1143706 | ID=cds.MS.gene92293.t1;Parent=MS.gene92293.t1 |
| chr5.1 | exon | 1144230 | 1144309 | 1144230 | ID=MS.gene92293.t1.exon7;Parent=MS.gene92293.t1 |
| chr5.1 | CDS | 1144230 | 1144309 | 1144230 | ID=cds.MS.gene92293.t1;Parent=MS.gene92293.t1 |
| chr5.1 | exon | 1144836 | 1144895 | 1144836 | ID=MS.gene92293.t1.exon8;Parent=MS.gene92293.t1 |
| chr5.1 | CDS | 1144836 | 1144895 | 1144836 | ID=cds.MS.gene92293.t1;Parent=MS.gene92293.t1 |
| chr5.1 | exon | 1145081 | 1145161 | 1145081 | ID=MS.gene92293.t1.exon9;Parent=MS.gene92293.t1 |
| chr5.1 | CDS | 1145081 | 1145161 | 1145081 | ID=cds.MS.gene92293.t1;Parent=MS.gene92293.t1 |
| chr5.1 | exon | 1146046 | 1146138 | 1146046 | ID=MS.gene92293.t1.exon10;Parent=MS.gene92293.t1 |
| chr5.1 | CDS | 1146046 | 1146138 | 1146046 | ID=cds.MS.gene92293.t1;Parent=MS.gene92293.t1 |
| Gene Sequence |
| Protein sequence |
