AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene93272

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93272.t1 MTR_1g053130 98.239 284 4 1 6 289 2 284 0.0 568
MS.gene93272.t1 MTR_4g112370 50.679 221 83 5 73 289 62 260 1.18e-69 216
MS.gene93272.t1 MTR_2g055990 57.803 173 66 2 117 289 94 259 6.85e-68 212
MS.gene93272.t1 MTR_2g054380 56.111 180 69 3 112 289 99 270 1.21e-64 204
MS.gene93272.t1 MTR_3g094830 42.678 239 113 6 57 289 39 259 1.14e-60 193
MS.gene93272.t1 MTR_8g040690 38.819 237 132 4 54 289 23 247 2.53e-52 171
MS.gene93272.t1 MTR_8g040680 39.574 235 129 4 56 289 35 257 6.51e-52 171
MS.gene93272.t1 MTR_7g064810 51.479 169 70 3 121 288 65 222 1.32e-45 154
MS.gene93272.t1 MTR_3g101300 47.701 174 74 5 122 288 72 235 3.71e-45 153
MS.gene93272.t1 MTR_3g086740 43.229 192 93 5 100 288 64 242 6.96e-40 139
MS.gene93272.t1 MTR_8g089865 40.278 216 106 8 82 288 19 220 8.50e-36 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene93272.t1 AT2G41660 60.173 231 62 7 78 289 78 297 2.15e-81 248
MS.gene93272.t1 AT3G25640 56.667 180 65 4 117 289 120 293 1.39e-65 207
MS.gene93272.t1 AT3G25640 56.667 180 65 4 117 289 94 267 2.63e-65 206
MS.gene93272.t1 AT5G23100 54.688 192 68 2 117 289 86 277 9.34e-62 197
MS.gene93272.t1 AT4G39610 43.925 214 105 5 88 289 54 264 9.67e-56 181
MS.gene93272.t1 AT2G21990 45.972 211 102 5 82 289 51 252 7.97e-55 178
MS.gene93272.t1 AT5G06990 50.838 179 74 2 118 289 90 261 2.31e-53 175
MS.gene93272.t1 AT2G37880 41.200 250 112 7 56 288 13 244 1.11e-50 167
MS.gene93272.t1 AT1G21050 51.786 168 67 4 123 288 89 244 1.50e-44 151
MS.gene93272.t1 AT1G21050 51.786 168 67 4 123 288 125 280 1.91e-44 152
MS.gene93272.t1 AT5G42680 45.402 174 73 5 122 288 78 236 3.45e-43 148
MS.gene93272.t1 AT5G42680 45.402 174 73 5 122 288 78 236 3.45e-43 148
MS.gene93272.t1 AT1G76610 48.555 173 67 3 118 288 73 225 1.20e-39 138
MS.gene93272.t1 AT2G22460 42.857 168 84 3 121 287 85 241 8.79e-32 118
MS.gene93272.t1 AT5G65340 39.655 174 90 5 122 288 84 249 6.68e-31 116

Find 93 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTGGTGCTTGTGCTTCTT+TGG 0.129151 1.3:-34160917 None:intergenic
AAAGTCACCGGAACACTATT+CGG 0.293447 1.3:+34161236 MS.gene93272:CDS
CTTGTAAAAGAGATGTCTTC+TGG 0.298609 1.3:+34161350 MS.gene93272:CDS
CCAGTTGCATGTTGGAAATA+TGG 0.321904 1.3:-34161159 None:intergenic
CTGTCAGCGGAGGCCGAGTC+AGG 0.347644 1.3:+34161423 MS.gene93272:CDS
TGCTTGTCGTTGGTGTTGAT+TGG 0.359625 1.3:-34161063 None:intergenic
ATGCAGTTTCACGCGCGTGC+GGG 0.374325 1.3:+34161498 MS.gene93272:CDS
GGCTCTTTCACGAGCCTGAT+TGG 0.382995 1.3:+34161444 MS.gene93272:CDS
TTGTCTTATAAGAAGGTTGC+CGG 0.394083 1.3:-34161012 None:intergenic
TTGTGCTTCTTTGGAGGGTA+AGG 0.404743 1.3:-34160908 None:intergenic
GGAGATTGAAGTGGAGGAGA+GGG 0.415417 1.3:-34161198 None:intergenic
GATTGAAGTGGAGGAGAGGG+TGG 0.420143 1.3:-34161195 None:intergenic
TTGGAGAAGGAAGAGATTGA+GGG 0.430429 1.3:-34161044 None:intergenic
AAGTCACCGGAACACTATTC+GGG 0.431122 1.3:+34161237 MS.gene93272:CDS
GGAGGAGAGGGTGGAAGGAA+TGG 0.431773 1.3:-34161186 None:intergenic
CAGAGCGTCTCCGTTGGTGC+TGG 0.435029 1.3:+34161551 MS.gene93272:CDS
TTGGAAGACGGTGGTGGTTG+CGG 0.438301 1.3:+34161587 MS.gene93272:CDS
TCTGAGAGTCGGTGGTTTGA+AGG 0.442471 1.3:-34160975 None:intergenic
GCTCAGCGCGAGGGTGAAGT+TGG 0.443033 1.3:-34161289 None:intergenic
CCATATTTCCAACATGCAAC+TGG 0.445563 1.3:+34161159 MS.gene93272:CDS
TGGTGGTTGCGGCGGGTCAG+AGG 0.446824 1.3:+34161598 MS.gene93272:CDS
ATTGGAGAAGGAAGAGATTG+AGG 0.447286 1.3:-34161045 None:intergenic
AGGCCGTTGATGATGTCTTC+CGG 0.449102 1.3:-34161397 None:intergenic
GCGCGTGCGGGGAACTAGAT+TGG 0.459648 1.3:+34161510 MS.gene93272:CDS
TTGCAGTACATGGTCCAATC+AGG 0.459939 1.3:-34161458 None:intergenic
TGGTGCTTGTGCTTCTTTGG+AGG 0.461418 1.3:-34160914 None:intergenic
ATGATCCTTGTCTTATAAGA+AGG 0.463120 1.3:-34161019 None:intergenic
GGTGGTTGCGGCGGGTCAGA+GGG 0.468321 1.3:+34161599 MS.gene93272:CDS
AAGACGGTGGTGGTTGCGGC+GGG 0.471799 1.3:+34161591 MS.gene93272:CDS
GGGAGATTGAAGTGGAGGAG+AGG 0.478606 1.3:-34161199 None:intergenic
GAAGACGGTGGTGGTTGCGG+CGG 0.486828 1.3:+34161590 MS.gene93272:CDS
TACGCATAGCACTCGAGTGC+CGG 0.487980 1.3:+34161378 MS.gene93272:CDS
TCTTGTTGTGATGGTGGCGC+TGG 0.489748 1.3:-34160934 None:intergenic
CTAAGTTTGAACGAGTCGTT+GGG 0.492538 1.3:+34161642 MS.gene93272:CDS
CTTCCTCCCATTGCAGTACA+TGG 0.493168 1.3:-34161468 None:intergenic
GCGGTTCCCGAATAGTGTTC+CGG 0.493902 1.3:-34161243 None:intergenic
GAAGTGGAGGAGAGGGTGGA+AGG 0.496950 1.3:-34161191 None:intergenic
AGAAGGGGAGATTGAAGTGG+AGG 0.499757 1.3:-34161204 None:intergenic
GGTGCTTGTGCTTCTTTGGA+GGG 0.501639 1.3:-34160913 None:intergenic
TGACTTTGCGGCCGAGAGAA+GGG 0.504625 1.3:-34161220 None:intergenic
ACGGTTGTTTCTTGTTGTGA+TGG 0.506599 1.3:-34160943 None:intergenic
GCTAAGTTTGAACGAGTCGT+TGG 0.511081 1.3:+34161641 MS.gene93272:CDS
TGCTGGAGTGATTCCGATGT+TGG 0.513577 1.3:+34161568 MS.gene93272:CDS
GGTTTGAAGGGATGATTCTA+CGG 0.515397 1.3:-34160962 None:intergenic
TCAGGTCCTCCATTACCATC+AGG 0.516962 1.3:-34161698 None:intergenic
TCTCTCGGCCGCAAAGTCAC+CGG 0.519696 1.3:+34161224 MS.gene93272:CDS
TGCAGTTTCACGCGCGTGCG+GGG 0.532660 1.3:+34161499 MS.gene93272:CDS
GTGACTTTGCGGCCGAGAGA+AGG 0.536152 1.3:-34161221 None:intergenic
TCAGAATCCGATGATTTCTC+CGG 0.538293 1.3:+34160993 MS.gene93272:CDS
CTGAGAGTCGGTGGTTTGAA+GGG 0.538740 1.3:-34160974 None:intergenic
GGAGGAGAGGCTCAGCGCGA+GGG 0.543462 1.3:-34161298 None:intergenic
AGGAGGAGAGGCTCAGCGCG+AGG 0.543469 1.3:-34161299 None:intergenic
ATAGTGTTCCGGTGACTTTG+CGG 0.545625 1.3:-34161232 None:intergenic
ACTTCAATCTCCCCTTCTCT+CGG 0.545830 1.3:+34161209 MS.gene93272:CDS
GACTTTGCGGCCGAGAGAAG+GGG 0.552039 1.3:-34161219 None:intergenic
TATGCAGTTTCACGCGCGTG+CGG 0.555704 1.3:+34161497 MS.gene93272:CDS
ATTGGACCATGTACTGCAAT+GGG 0.563845 1.3:+34161462 MS.gene93272:CDS
AGCGCGAGGGTGAAGTTGGA+CGG 0.564609 1.3:-34161285 None:intergenic
TCGGCCTCCGCTGACAGCAG+AGG 0.566319 1.3:-34161417 None:intergenic
ATGCTGAATCCTGATGGTAA+TGG 0.566859 1.3:+34161689 MS.gene93272:CDS
CGGAATCACTCCAGCACCAA+CGG 0.569655 1.3:-34161561 None:intergenic
GAGAGAAGGGGAGATTGAAG+TGG 0.573132 1.3:-34161207 None:intergenic
TGTAGAATGCTTCTGAATCA+CGG 0.573910 1.3:-34161667 None:intergenic
ACGGCCTCTGCTGTCAGCGG+AGG 0.579974 1.3:+34161413 MS.gene93272:CDS
GTTGTTTCTTGTTGTGATGG+TGG 0.582624 1.3:-34160940 None:intergenic
ACATAGCGAGTTCGAGAAGG+AGG 0.590128 1.3:-34161316 None:intergenic
TTCTACATGCTGAATCCTGA+TGG 0.590177 1.3:+34161683 MS.gene93272:CDS
TCGTTGGTGTTGATTGGAGA+AGG 0.592725 1.3:-34161057 None:intergenic
TTTGAAAAGTGAAGATGTTG+AGG 0.593208 1.3:-34161136 None:intergenic
TGGACATAGCGAGTTCGAGA+AGG 0.605156 1.3:-34161319 None:intergenic
AAGGTTGCCGGAGAAATCAT+CGG 0.607947 1.3:-34161000 None:intergenic
ACCGTGCAGAGCGTCTCCGT+TGG 0.610808 1.3:+34161545 MS.gene93272:CDS
CATCGGATTCTGAGAGTCGG+TGG 0.616685 1.3:-34160983 None:intergenic
CCACCACCGTCTTCCAACAT+CGG 0.616834 1.3:-34161581 None:intergenic
GCGAGTTCGAGAAGGAGGAG+AGG 0.621187 1.3:-34161311 None:intergenic
TCAACGGCCTCTGCTGTCAG+CGG 0.629700 1.3:+34161410 MS.gene93272:CDS
GCTCGTGAAAGAGCCTGACT+CGG 0.630507 1.3:-34161436 None:intergenic
CCGATGTTGGAAGACGGTGG+TGG 0.631582 1.3:+34161581 MS.gene93272:CDS
TACTGCAATGGGAGGAAGTG+TGG 0.640689 1.3:+34161473 MS.gene93272:CDS
GGCAACCTTCTTATAAGACA+AGG 0.649199 1.3:+34161014 MS.gene93272:CDS
ATGGTGAGCCAGTTGCATGT+TGG 0.650364 1.3:-34161167 None:intergenic
GATTGGACCATGTACTGCAA+TGG 0.654203 1.3:+34161461 MS.gene93272:CDS
AATCATCGGATTCTGAGAGT+CGG 0.655452 1.3:-34160986 None:intergenic
ACCAACGGAGACGCTCTGCA+CGG 0.656538 1.3:-34161546 None:intergenic
ACACTATTCGGGAACCGCCG+TGG 0.663690 1.3:+34161248 MS.gene93272:CDS
CTGAATCCTGATGGTAATGG+AGG 0.668681 1.3:+34161692 MS.gene93272:CDS
GTGCCGGAAGACATCATCAA+CGG 0.668697 1.3:+34161394 MS.gene93272:CDS
GGACCATGTACTGCAATGGG+AGG 0.677416 1.3:+34161465 MS.gene93272:CDS
GTGATTCCGATGTTGGAAGA+CGG 0.682336 1.3:+34161575 MS.gene93272:CDS
CGGCGAATGATATATGACCA+CGG 0.718132 1.3:-34161265 None:intergenic
AACGGAGACGCTCTGCACGG+TGG 0.748096 1.3:-34161543 None:intergenic
ATTCCGATGTTGGAAGACGG+TGG 0.749157 1.3:+34161578 MS.gene93272:CDS
CGAATGATATATGACCACGG+CGG 0.887276 1.3:-34161262 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGAAAAATACTAAGTTC+AGG - chr1.3:34161719-34161738 None:intergenic 20.0%
ATGATCCTTGTCTTATAAGA+AGG - chr1.3:34161022-34161041 None:intergenic 30.0%
TTTGAAAAGTGAAGATGTTG+AGG - chr1.3:34161139-34161158 None:intergenic 30.0%
CTTGTAAAAGAGATGTCTTC+TGG + chr1.3:34161350-34161369 MS.gene93272:CDS 35.0%
TGTAGAATGCTTCTGAATCA+CGG - chr1.3:34161670-34161689 None:intergenic 35.0%
TTGTCTTATAAGAAGGTTGC+CGG - chr1.3:34161015-34161034 None:intergenic 35.0%
! CTCTTTTACAAGTGAAGAAG+TGG - chr1.3:34161342-34161361 None:intergenic 35.0%
!!! TTGTTTGTTTTGCTTGTCGT+TGG - chr1.3:34161076-34161095 None:intergenic 35.0%
AAAGTCACCGGAACACTATT+CGG + chr1.3:34161236-34161255 MS.gene93272:CDS 40.0%
ATGCTGAATCCTGATGGTAA+TGG + chr1.3:34161689-34161708 MS.gene93272:CDS 40.0%
ATTGGACCATGTACTGCAAT+GGG + chr1.3:34161462-34161481 MS.gene93272:CDS 40.0%
ATTGGAGAAGGAAGAGATTG+AGG - chr1.3:34161048-34161067 None:intergenic 40.0%
CCAGTTGCATGTTGGAAATA+TGG - chr1.3:34161162-34161181 None:intergenic 40.0%
CCATATTTCCAACATGCAAC+TGG + chr1.3:34161159-34161178 MS.gene93272:CDS 40.0%
CTAAGTTTGAACGAGTCGTT+GGG + chr1.3:34161642-34161661 MS.gene93272:CDS 40.0%
GGCAACCTTCTTATAAGACA+AGG + chr1.3:34161014-34161033 MS.gene93272:CDS 40.0%
GGTTTGAAGGGATGATTCTA+CGG - chr1.3:34160965-34160984 None:intergenic 40.0%
TCAGAATCCGATGATTTCTC+CGG + chr1.3:34160993-34161012 MS.gene93272:CDS 40.0%
TTCTACATGCTGAATCCTGA+TGG + chr1.3:34161683-34161702 MS.gene93272:CDS 40.0%
TTGGAGAAGGAAGAGATTGA+GGG - chr1.3:34161047-34161066 None:intergenic 40.0%
! AATCATCGGATTCTGAGAGT+CGG - chr1.3:34160989-34161008 None:intergenic 40.0%
!! ACGGTTGTTTCTTGTTGTGA+TGG - chr1.3:34160946-34160965 None:intergenic 40.0%
!! GTTGTTTCTTGTTGTGATGG+TGG - chr1.3:34160943-34160962 None:intergenic 40.0%
AAGGTTGCCGGAGAAATCAT+CGG - chr1.3:34161003-34161022 None:intergenic 45.0%
AAGTCACCGGAACACTATTC+GGG + chr1.3:34161237-34161256 MS.gene93272:CDS 45.0%
ACTTCAATCTCCCCTTCTCT+CGG + chr1.3:34161209-34161228 MS.gene93272:CDS 45.0%
ATAGTGTTCCGGTGACTTTG+CGG - chr1.3:34161235-34161254 None:intergenic 45.0%
CGAATGATATATGACCACGG+CGG - chr1.3:34161265-34161284 None:intergenic 45.0%
CGGCGAATGATATATGACCA+CGG - chr1.3:34161268-34161287 None:intergenic 45.0%
GATTGGACCATGTACTGCAA+TGG + chr1.3:34161461-34161480 MS.gene93272:CDS 45.0%
GCTAAGTTTGAACGAGTCGT+TGG + chr1.3:34161641-34161660 MS.gene93272:CDS 45.0%
GTGATTCCGATGTTGGAAGA+CGG + chr1.3:34161575-34161594 MS.gene93272:CDS 45.0%
TTGCAGTACATGGTCCAATC+AGG - chr1.3:34161461-34161480 None:intergenic 45.0%
! TTGTGCTTCTTTGGAGGGTA+AGG - chr1.3:34160911-34160930 None:intergenic 45.0%
!! CTGAATCCTGATGGTAATGG+AGG + chr1.3:34161692-34161711 MS.gene93272:CDS 45.0%
!! TCGTTGGTGTTGATTGGAGA+AGG - chr1.3:34161060-34161079 None:intergenic 45.0%
!! TGCTTGTCGTTGGTGTTGAT+TGG - chr1.3:34161066-34161085 None:intergenic 45.0%
ACATAGCGAGTTCGAGAAGG+AGG - chr1.3:34161319-34161338 None:intergenic 50.0%
AGAAGGGGAGATTGAAGTGG+AGG - chr1.3:34161207-34161226 None:intergenic 50.0%
ATGGTGAGCCAGTTGCATGT+TGG - chr1.3:34161170-34161189 None:intergenic 50.0%
ATTCCGATGTTGGAAGACGG+TGG + chr1.3:34161578-34161597 MS.gene93272:CDS 50.0%
CTGAGAGTCGGTGGTTTGAA+GGG - chr1.3:34160977-34160996 None:intergenic 50.0%
CTTCCTCCCATTGCAGTACA+TGG - chr1.3:34161471-34161490 None:intergenic 50.0%
GAGAGAAGGGGAGATTGAAG+TGG - chr1.3:34161210-34161229 None:intergenic 50.0%
GGAGATTGAAGTGGAGGAGA+GGG - chr1.3:34161201-34161220 None:intergenic 50.0%
GGTGCTTGTGCTTCTTTGGA+GGG - chr1.3:34160916-34160935 None:intergenic 50.0%
GTGCCGGAAGACATCATCAA+CGG + chr1.3:34161394-34161413 MS.gene93272:CDS 50.0%
TACTGCAATGGGAGGAAGTG+TGG + chr1.3:34161473-34161492 MS.gene93272:CDS 50.0%
TCAGGTCCTCCATTACCATC+AGG - chr1.3:34161701-34161720 None:intergenic 50.0%
TCTGAGAGTCGGTGGTTTGA+AGG - chr1.3:34160978-34160997 None:intergenic 50.0%
TGCTGGAGTGATTCCGATGT+TGG + chr1.3:34161568-34161587 MS.gene93272:CDS 50.0%
TGGACATAGCGAGTTCGAGA+AGG - chr1.3:34161322-34161341 None:intergenic 50.0%
TGGTGCTTGTGCTTCTTTGG+AGG - chr1.3:34160917-34160936 None:intergenic 50.0%
!! AGGCCGTTGATGATGTCTTC+CGG - chr1.3:34161400-34161419 None:intergenic 50.0%
CCACCACCGTCTTCCAACAT+CGG - chr1.3:34161584-34161603 None:intergenic 55.0%
CGCTGGTGCTTGTGCTTCTT+TGG - chr1.3:34160920-34160939 None:intergenic 55.0%
CGGAATCACTCCAGCACCAA+CGG - chr1.3:34161564-34161583 None:intergenic 55.0%
GATTGAAGTGGAGGAGAGGG+TGG - chr1.3:34161198-34161217 None:intergenic 55.0%
GCGGTTCCCGAATAGTGTTC+CGG - chr1.3:34161246-34161265 None:intergenic 55.0%
GCTCGTGAAAGAGCCTGACT+CGG - chr1.3:34161439-34161458 None:intergenic 55.0%
GGACCATGTACTGCAATGGG+AGG + chr1.3:34161465-34161484 MS.gene93272:CDS 55.0%
GGCTCTTTCACGAGCCTGAT+TGG + chr1.3:34161444-34161463 MS.gene93272:CDS 55.0%
GGGAGATTGAAGTGGAGGAG+AGG - chr1.3:34161202-34161221 None:intergenic 55.0%
TACGCATAGCACTCGAGTGC+CGG + chr1.3:34161378-34161397 MS.gene93272:CDS 55.0%
TATGCAGTTTCACGCGCGTG+CGG + chr1.3:34161497-34161516 MS.gene93272:CDS 55.0%
TGACTTTGCGGCCGAGAGAA+GGG - chr1.3:34161223-34161242 None:intergenic 55.0%
! CATCGGATTCTGAGAGTCGG+TGG - chr1.3:34160986-34161005 None:intergenic 55.0%
! TTGGAAGACGGTGGTGGTTG+CGG + chr1.3:34161587-34161606 MS.gene93272:CDS 55.0%
!! TCTTGTTGTGATGGTGGCGC+TGG - chr1.3:34160937-34160956 None:intergenic 55.0%
ACACTATTCGGGAACCGCCG+TGG + chr1.3:34161248-34161267 MS.gene93272:CDS 60.0%
ACCAACGGAGACGCTCTGCA+CGG - chr1.3:34161549-34161568 None:intergenic 60.0%
AGCGCGAGGGTGAAGTTGGA+CGG - chr1.3:34161288-34161307 None:intergenic 60.0%
ATGCAGTTTCACGCGCGTGC+GGG + chr1.3:34161498-34161517 MS.gene93272:CDS 60.0%
CCGATGTTGGAAGACGGTGG+TGG + chr1.3:34161581-34161600 MS.gene93272:CDS 60.0%
GAAGTGGAGGAGAGGGTGGA+AGG - chr1.3:34161194-34161213 None:intergenic 60.0%
GACTTTGCGGCCGAGAGAAG+GGG - chr1.3:34161222-34161241 None:intergenic 60.0%
GCGAGTTCGAGAAGGAGGAG+AGG - chr1.3:34161314-34161333 None:intergenic 60.0%
GGAGGAGAGGGTGGAAGGAA+TGG - chr1.3:34161189-34161208 None:intergenic 60.0%
GTGACTTTGCGGCCGAGAGA+AGG - chr1.3:34161224-34161243 None:intergenic 60.0%
TCAACGGCCTCTGCTGTCAG+CGG + chr1.3:34161410-34161429 MS.gene93272:CDS 60.0%
TCTCTCGGCCGCAAAGTCAC+CGG + chr1.3:34161224-34161243 MS.gene93272:CDS 60.0%
AACGGAGACGCTCTGCACGG+TGG - chr1.3:34161546-34161565 None:intergenic 65.0%
GCGCGTGCGGGGAACTAGAT+TGG + chr1.3:34161510-34161529 MS.gene93272:CDS 65.0%
GCTCAGCGCGAGGGTGAAGT+TGG - chr1.3:34161292-34161311 None:intergenic 65.0%
TGCAGTTTCACGCGCGTGCG+GGG + chr1.3:34161499-34161518 MS.gene93272:CDS 65.0%
! AAGACGGTGGTGGTTGCGGC+GGG + chr1.3:34161591-34161610 MS.gene93272:CDS 65.0%
! ACCGTGCAGAGCGTCTCCGT+TGG + chr1.3:34161545-34161564 MS.gene93272:CDS 65.0%
! CAGAGCGTCTCCGTTGGTGC+TGG + chr1.3:34161551-34161570 MS.gene93272:CDS 65.0%
! GAAGACGGTGGTGGTTGCGG+CGG + chr1.3:34161590-34161609 MS.gene93272:CDS 65.0%
ACGGCCTCTGCTGTCAGCGG+AGG + chr1.3:34161413-34161432 MS.gene93272:CDS 70.0%
AGGAGGAGAGGCTCAGCGCG+AGG - chr1.3:34161302-34161321 None:intergenic 70.0%
CTGTCAGCGGAGGCCGAGTC+AGG + chr1.3:34161423-34161442 MS.gene93272:CDS 70.0%
GGAGGAGAGGCTCAGCGCGA+GGG - chr1.3:34161301-34161320 None:intergenic 70.0%
GGTGGTTGCGGCGGGTCAGA+GGG + chr1.3:34161599-34161618 MS.gene93272:CDS 70.0%
TCGGCCTCCGCTGACAGCAG+AGG - chr1.3:34161420-34161439 None:intergenic 70.0%
TGGTGGTTGCGGCGGGTCAG+AGG + chr1.3:34161598-34161617 MS.gene93272:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 34160879 34161748 34160879 ID=MS.gene93272
chr1.3 mRNA 34160879 34161748 34160879 ID=MS.gene93272.t1;Parent=MS.gene93272
chr1.3 exon 34160879 34161748 34160879 ID=MS.gene93272.t1.exon1;Parent=MS.gene93272.t1
chr1.3 CDS 34160879 34161748 34160879 ID=cds.MS.gene93272.t1;Parent=MS.gene93272.t1
Gene Sequence

>MS.gene93272

ATGAAACATCATCAACAACAACAACAAAACCTTACCCTCCAAAGAAGCACAAGCACCAGCGCCACCATCACAACAAGAAACAACCGTAGAATCATCCCTTCAAACCACCGACTCTCAGAATCCGATGATTTCTCCGGCAACCTTCTTATAAGACAAGGATCATCACCCTCAATCTCTTCCTTCTCCAATCAACACCAACGACAAGCAAAACAAACAACAACAACAACAAAGAAGCTATCTTCACTCATACGTTCTTTCCTCAACATCTTCACTTTTCAAACCATATTTCCAACATGCAACTGGCTCACCATTCCTTCCACCCTCTCCTCCACTTCAATCTCCCCTTCTCTCGGCCGCAAAGTCACCGGAACACTATTCGGGAACCGCCGTGGTCATATATCATTCGCCGTCCAACTTCACCCTCGCGCTGAGCCTCTCCTCCTTCTCGAACTCGCTATGTCCACTTCTTCACTTGTAAAAGAGATGTCTTCTGGACTCGTACGCATAGCACTCGAGTGCCGGAAGACATCATCAACGGCCTCTGCTGTCAGCGGAGGCCGAGTCAGGCTCTTTCACGAGCCTGATTGGACCATGTACTGCAATGGGAGGAAGTGTGGCTATGCAGTTTCACGCGCGTGCGGGGAACTAGATTGGCACGTGCTGACCACCGTGCAGAGCGTCTCCGTTGGTGCTGGAGTGATTCCGATGTTGGAAGACGGTGGTGGTTGCGGCGGGTCAGAGGGTGAGTTGATGTATATGAGAGCTAAGTTTGAACGAGTCGTTGGGAGCCGTGATTCAGAAGCATTCTACATGCTGAATCCTGATGGTAATGGAGGACCTGAACTTAGTATTTTTCTATTGAGAATATGA
Protein sequence

>MS.gene93272.t1

MKHHQQQQQNLTLQRSTSTSATITTRNNRRIIPSNHRLSESDDFSGNLLIRQGSSPSISSFSNQHQRQAKQTTTTTKKLSSLIRSFLNIFTFQTIFPTCNWLTIPSTLSSTSISPSLGRKVTGTLFGNRRGHISFAVQLHPRAEPLLLLELAMSTSSLVKEMSSGLVRIALECRKTSSTASAVSGGRVRLFHEPDWTMYCNGRKCGYAVSRACGELDWHVLTTVQSVSVGAGVIPMLEDGGGCGGSEGELMYMRAKFERVVGSRDSEAFYMLNPDGNGGPELSIFLLRI