AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031528

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031528.t1 MTR_4g081390 97.987 795 14 1 1 795 1 793 0.0 1597
MS.gene031528.t1 MTR_4g081390 98.098 736 14 0 1 736 1 736 0.0 1477
MS.gene031528.t1 MTR_2g082570 81.102 762 141 3 36 795 1 761 0.0 1276
MS.gene031528.t1 MTR_2g082570 79.522 669 134 3 36 702 1 668 0.0 1091
MS.gene031528.t1 MTR_2g010760 58.399 762 297 5 41 794 35 784 0.0 855
MS.gene031528.t1 MTR_4g092140 49.496 794 268 22 1 784 1 671 0.0 645
MS.gene031528.t1 MTR_1g082920 45.974 385 183 7 407 784 115 481 8.02e-96 316
MS.gene031528.t1 MTR_2g069950 45.600 375 189 5 408 782 314 673 2.92e-95 319
MS.gene031528.t1 MTR_7g113520 45.407 381 183 8 411 784 99 461 2.35e-92 305
MS.gene031528.t1 MTR_7g112420 42.094 449 211 10 352 780 186 605 3.74e-92 308
MS.gene031528.t1 MTR_8g098230 39.518 539 284 14 259 786 324 831 5.97e-91 309
MS.gene031528.t1 MTR_8g098230 39.259 540 276 14 259 786 324 823 6.24e-91 309
MS.gene031528.t1 MTR_5g031470 39.655 464 241 7 342 784 286 731 8.23e-91 308
MS.gene031528.t1 MTR_7g112420 41.648 449 207 10 352 780 316 729 1.74e-89 303
MS.gene031528.t1 MTR_5g049620 43.636 385 199 5 400 784 340 706 2.39e-89 301
MS.gene031528.t1 MTR_7g109130 44.565 368 181 8 422 785 87 435 4.78e-89 296
MS.gene031528.t1 MTR_7g109130 44.565 368 181 8 422 785 166 514 1.27e-88 297
MS.gene031528.t1 MTR_5g049820 39.009 464 244 7 342 784 261 706 6.65e-88 298
MS.gene031528.t1 MTR_1g087880 45.109 368 179 8 422 785 384 732 8.46e-88 299
MS.gene031528.t1 MTR_7g109130 44.565 368 181 8 422 785 388 736 7.61e-87 296
MS.gene031528.t1 MTR_7g109130 44.624 372 178 9 422 785 388 739 1.98e-86 295
MS.gene031528.t1 MTR_5g096570 37.087 515 252 14 310 780 282 768 1.70e-83 291
MS.gene031528.t1 MTR_3g060900 39.294 425 216 9 365 778 369 762 2.95e-81 282
MS.gene031528.t1 MTR_1g083770 43.324 367 180 8 422 780 398 744 5.02e-80 277
MS.gene031528.t1 MTR_8g104200 44.385 374 179 7 422 786 503 856 4.40e-77 272
MS.gene031528.t1 MTR_8g072430 34.074 540 288 15 252 786 731 1207 5.54e-76 268
MS.gene031528.t1 MTR_1g081800 39.747 395 220 7 382 775 37 414 7.11e-76 258
MS.gene031528.t1 MTR_7g091290 36.947 452 229 11 340 780 316 722 7.18e-76 266
MS.gene031528.t1 MTR_5g025100 40.761 368 199 5 406 773 861 1209 4.16e-75 266
MS.gene031528.t1 MTR_6g084490 33.556 599 323 15 216 786 261 812 1.49e-69 246
MS.gene031528.t1 MTR_7g091290 33.703 451 204 10 340 780 313 678 1.75e-62 227
MS.gene031528.t1 MTR_4g087040 40.390 359 175 12 431 771 190 527 2.58e-61 226
MS.gene031528.t1 MTR_2g096010 37.709 358 204 8 425 771 39 388 1.95e-56 210
MS.gene031528.t1 MTR_1g067630 38.506 348 197 8 434 771 54 394 6.88e-56 208
MS.gene031528.t1 MTR_2g087840 39.722 360 170 10 434 771 88 422 7.51e-56 209
MS.gene031528.t1 MTR_7g105030 37.255 357 193 10 434 771 9 353 2.40e-55 206
MS.gene031528.t1 MTR_7g105030 37.255 357 193 10 434 771 9 353 2.40e-55 206
MS.gene031528.t1 MTR_1g059730 37.640 356 193 10 434 771 13 357 5.74e-55 205
MS.gene031528.t1 MTR_4g123730 42.020 307 148 8 481 771 191 483 5.93e-55 206
MS.gene031528.t1 MTR_3g084790 37.190 363 178 11 435 773 99 435 1.25e-54 205
MS.gene031528.t1 MTR_8g080910 36.483 381 186 11 420 773 40 391 2.82e-54 204
MS.gene031528.t1 MTR_8g471180 36.088 363 206 5 421 783 133 469 1.11e-52 199
MS.gene031528.t1 MTR_1g484960 36.286 350 180 9 435 771 4 323 4.03e-52 197
MS.gene031528.t1 MTR_3g100270 36.103 349 200 10 434 771 9 345 3.60e-50 191
MS.gene031528.t1 MTR_3g102170 37.637 364 188 12 435 771 9 360 5.58e-50 190
MS.gene031528.t1 MTR_5g066320 35.920 348 201 9 435 771 18 354 8.98e-50 190
MS.gene031528.t1 MTR_4g094882 35.792 366 198 12 434 771 12 368 1.54e-49 189
MS.gene031528.t1 MTR_1g018940 36.464 362 195 12 435 771 9 360 3.78e-49 187
MS.gene031528.t1 MTR_1g017540 36.182 351 186 10 435 771 4 330 1.46e-48 185
MS.gene031528.t1 MTR_2g055910 36.127 346 189 11 435 770 69 392 3.72e-46 175
MS.gene031528.t1 MTR_4g112350 37.627 295 159 7 481 770 176 450 1.21e-43 169
MS.gene031528.t1 MTR_5g011500 32.791 369 203 11 431 775 54 401 2.76e-43 169
MS.gene031528.t1 MTR_4g071210 35.393 356 197 10 432 782 87 414 1.01e-42 168
MS.gene031528.t1 MTR_4g071210 35.393 356 197 10 432 782 87 414 1.06e-42 168
MS.gene031528.t1 MTR_7g075060 33.424 368 201 11 431 775 49 395 1.07e-41 164
MS.gene031528.t1 MTR_3g117330 35.227 352 195 10 434 780 99 422 3.26e-41 163
MS.gene031528.t1 MTR_3g055940 35.783 313 164 7 481 771 108 405 9.11e-41 162
MS.gene031528.t1 MTR_6g082470 35.216 301 165 6 477 771 73 349 1.61e-40 161
MS.gene031528.t1 MTR_5g094310 33.784 370 190 10 427 771 67 406 3.15e-40 160
MS.gene031528.t1 MTR_6g086735 33.989 356 202 7 435 782 116 446 2.69e-39 155
MS.gene031528.t1 MTR_4g071900 35.570 298 156 8 480 768 70 340 3.21e-39 156
MS.gene031528.t1 MTR_7g061020 33.815 346 195 11 435 770 26 347 3.81e-39 154
MS.gene031528.t1 MTR_6g086735 34.270 356 201 8 435 782 116 446 4.98e-39 154
MS.gene031528.t1 MTR_2g436650 34.316 373 190 14 435 781 118 461 8.80e-39 155
MS.gene031528.t1 MTR_2g436650 34.316 373 190 14 435 781 198 541 2.49e-38 154
MS.gene031528.t1 MTR_7g093720 33.711 353 197 10 432 776 71 394 2.77e-38 154
MS.gene031528.t1 MTR_4g124650 35.430 302 163 8 480 776 187 461 7.08e-38 153
MS.gene031528.t1 MTR_5g021650 35.216 301 155 8 480 769 68 339 7.81e-38 152
MS.gene031528.t1 MTR_8g076190 34.884 301 156 8 480 769 67 338 8.00e-38 153
MS.gene031528.t1 MTR_2g101990 34.473 351 197 10 435 777 186 511 9.15e-38 151
MS.gene031528.t1 MTR_8g076190 34.884 301 156 8 480 769 67 338 1.56e-37 151
MS.gene031528.t1 MTR_8g076190 34.416 308 155 8 480 769 67 345 6.36e-37 150
MS.gene031528.t1 MTR_3g113110 32.471 348 192 9 435 769 20 337 7.93e-37 150
MS.gene031528.t1 MTR_4g119980 31.707 369 203 8 435 781 206 547 3.56e-36 147
MS.gene031528.t1 MTR_1g075680 30.028 363 195 13 460 788 75 412 1.81e-30 129
MS.gene031528.t1 MTR_3g113630 29.371 286 150 11 483 749 145 397 2.03e-17 87.8
MS.gene031528.t1 MTR_3g113630 27.622 286 155 9 483 749 145 397 2.50e-17 87.4
MS.gene031528.t1 MTR_6g053680 26.263 297 189 8 481 775 51 319 9.66e-17 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031528.t1 AT5G54670 64.163 759 251 4 42 793 8 752 0.0 993
MS.gene031528.t1 AT5G54670 64.163 759 251 4 42 793 8 752 0.0 993
MS.gene031528.t1 AT4G27180 63.026 760 249 5 42 793 8 743 0.0 961
MS.gene031528.t1 AT4G27180 63.026 760 249 5 42 793 8 743 0.0 961
MS.gene031528.t1 AT4G21270 61.015 808 285 9 1 794 1 792 0.0 941
MS.gene031528.t1 AT4G05190 59.876 805 296 7 1 794 1 789 0.0 920
MS.gene031528.t1 AT5G54670 64.245 702 230 4 99 793 5 692 0.0 919
MS.gene031528.t1 AT4G05190 61.719 768 273 6 38 794 19 776 0.0 916
MS.gene031528.t1 AT1G72250 41.270 504 251 12 301 782 345 825 2.65e-98 331
MS.gene031528.t1 AT1G72250 45.647 425 205 9 360 782 434 834 3.50e-98 331
MS.gene031528.t1 AT1G72250 45.647 425 205 9 360 782 445 845 4.51e-98 331
MS.gene031528.t1 AT1G72250 45.647 425 205 9 360 782 446 846 4.56e-98 331
MS.gene031528.t1 AT5G27550 43.026 423 219 6 363 784 65 466 2.16e-94 312
MS.gene031528.t1 AT5G27550 43.026 423 219 6 363 784 65 466 2.16e-94 312
MS.gene031528.t1 AT2G22610 45.078 386 192 5 400 784 383 749 8.22e-93 314
MS.gene031528.t1 AT2G22610 45.078 386 192 5 400 784 384 750 8.75e-93 314
MS.gene031528.t1 AT2G22610 45.078 386 192 5 400 784 383 749 8.81e-93 314
MS.gene031528.t1 AT1G63640 38.432 523 249 14 311 786 306 802 1.63e-91 310
MS.gene031528.t1 AT1G63640 38.432 523 249 14 311 786 316 812 1.84e-91 310
MS.gene031528.t1 AT1G63640 38.432 523 249 14 311 786 316 812 1.84e-91 310
MS.gene031528.t1 AT1G63640 38.432 523 249 14 311 786 316 812 1.84e-91 310
MS.gene031528.t1 AT1G73860 37.355 605 312 18 209 786 203 767 1.07e-90 306
MS.gene031528.t1 AT1G73860 37.355 605 312 18 209 786 286 850 5.31e-90 305
MS.gene031528.t1 AT1G09170 45.304 362 178 7 422 780 422 766 1.94e-89 300
MS.gene031528.t1 AT1G63640 37.859 523 245 14 311 786 316 805 2.49e-89 304
MS.gene031528.t1 AT1G09170 45.304 362 178 7 422 780 422 766 2.80e-89 299
MS.gene031528.t1 AT1G09170 45.304 362 178 7 422 780 422 766 2.80e-89 299
MS.gene031528.t1 AT1G09170 45.304 362 178 7 422 780 422 766 5.58e-89 300
MS.gene031528.t1 AT1G09170 45.304 362 178 7 422 780 422 766 3.27e-88 301
MS.gene031528.t1 AT2G47500 45.879 364 172 7 422 780 387 730 1.12e-87 298
MS.gene031528.t1 AT2G47500 45.879 364 172 7 422 780 387 730 1.86e-87 298
MS.gene031528.t1 AT5G41310 44.504 373 161 6 422 786 410 744 1.53e-86 295
MS.gene031528.t1 AT5G27000 44.722 360 184 4 422 780 382 727 6.54e-86 293
MS.gene031528.t1 AT1G18410 36.598 582 286 16 235 786 283 811 3.57e-85 291
MS.gene031528.t1 AT1G18410 36.770 582 293 17 235 786 293 829 6.70e-85 291
MS.gene031528.t1 AT1G18410 36.770 582 293 17 235 786 293 829 6.70e-85 291
MS.gene031528.t1 AT3G44730 39.746 473 212 16 329 780 291 711 7.41e-85 292
MS.gene031528.t1 AT3G44730 39.746 473 212 16 329 780 291 711 7.41e-85 292
MS.gene031528.t1 AT3G44730 39.915 471 214 15 329 780 336 756 7.45e-85 293
MS.gene031528.t1 AT3G44730 39.915 471 214 15 329 780 336 756 7.45e-85 293
MS.gene031528.t1 AT1G18410 36.598 582 286 16 235 786 436 964 8.12e-84 290
MS.gene031528.t1 AT1G18410 36.770 582 293 17 235 786 436 972 1.04e-83 290
MS.gene031528.t1 AT3G10310 43.617 376 181 10 412 780 344 695 6.06e-82 282
MS.gene031528.t1 AT3G10310 43.351 376 182 9 412 780 344 695 7.61e-82 282
MS.gene031528.t1 AT5G27950 40.299 402 214 8 379 775 25 405 6.94e-76 258
MS.gene031528.t1 AT5G65930 32.201 677 366 19 103 771 614 1205 2.33e-75 267
MS.gene031528.t1 AT5G65930 32.201 677 366 19 103 771 621 1212 2.38e-75 267
MS.gene031528.t1 AT5G65930 32.201 677 366 19 103 771 615 1206 2.38e-75 267
MS.gene031528.t1 AT1G09170 45.031 322 157 7 422 740 422 726 1.83e-74 257
MS.gene031528.t1 AT1G09170 45.031 322 157 7 422 740 422 726 1.83e-74 257
MS.gene031528.t1 AT1G09170 40.608 362 159 6 422 780 422 730 2.20e-73 259
MS.gene031528.t1 AT1G55550 39.444 360 196 8 419 777 76 414 2.13e-72 254
MS.gene031528.t1 AT3G19050 41.127 355 172 12 434 771 193 527 7.72e-63 231
MS.gene031528.t1 AT3G17360 38.983 354 181 10 434 771 168 502 1.72e-58 217
MS.gene031528.t1 AT3G17360 38.983 354 181 10 434 771 168 502 1.76e-58 217
MS.gene031528.t1 AT3G17360 38.983 354 181 10 434 771 168 502 1.78e-58 217
MS.gene031528.t1 AT2G36200 38.056 360 186 9 434 771 12 356 8.68e-58 214
MS.gene031528.t1 AT2G36200 38.056 360 186 9 434 771 12 356 1.34e-57 213
MS.gene031528.t1 AT3G45850 37.746 355 189 10 434 771 55 394 8.62e-57 211
MS.gene031528.t1 AT3G45850 37.746 355 189 10 434 771 55 394 8.62e-57 211
MS.gene031528.t1 AT3G44050 39.831 354 178 10 434 771 93 427 4.49e-56 209
MS.gene031528.t1 AT2G28620 37.571 354 191 11 434 771 50 389 1.53e-55 207
MS.gene031528.t1 AT2G28620 37.571 354 191 11 434 771 50 389 1.53e-55 207
MS.gene031528.t1 AT2G37420 37.607 351 195 10 434 771 48 387 1.77e-55 207
MS.gene031528.t1 AT2G37420 37.607 351 195 10 434 771 48 387 1.77e-55 207
MS.gene031528.t1 AT2G28620 37.571 354 191 11 434 771 50 389 1.82e-55 207
MS.gene031528.t1 AT4G14150 36.288 361 181 10 435 773 92 425 6.49e-54 203
MS.gene031528.t1 AT5G65460 35.328 351 201 5 421 771 125 449 1.12e-53 202
MS.gene031528.t1 AT3G50240 36.986 365 189 10 435 771 26 377 1.32e-53 201
MS.gene031528.t1 AT5G65460 35.328 351 201 5 421 771 125 449 1.53e-53 201
MS.gene031528.t1 AT5G65460 35.328 351 201 5 421 771 125 449 1.80e-53 201
MS.gene031528.t1 AT5G65460 35.328 351 201 5 421 771 125 449 1.97e-53 201
MS.gene031528.t1 AT3G50240 36.986 365 189 10 435 771 26 377 3.97e-53 200
MS.gene031528.t1 AT3G50240 36.986 365 189 10 435 771 26 377 4.41e-53 200
MS.gene031528.t1 AT5G65460 34.930 355 204 5 421 771 125 456 4.87e-53 200
MS.gene031528.t1 AT3G23670 36.639 363 177 11 435 773 97 430 8.12e-53 199
MS.gene031528.t1 AT3G23670 36.639 363 177 11 435 773 97 430 1.26e-52 199
MS.gene031528.t1 AT5G10470 35.411 353 198 7 421 771 129 453 1.54e-51 196
MS.gene031528.t1 AT5G10470 35.411 353 198 7 421 771 129 453 1.63e-51 196
MS.gene031528.t1 AT5G47820 36.957 368 191 14 434 771 11 367 2.44e-51 194
MS.gene031528.t1 AT5G47820 36.957 368 191 14 434 771 11 367 2.44e-51 194
MS.gene031528.t1 AT3G10180 35.429 350 184 7 435 771 4 324 2.48e-51 195
MS.gene031528.t1 AT3G10180 35.429 350 184 7 435 771 4 324 2.67e-51 195
MS.gene031528.t1 AT3G63480 36.188 362 191 14 434 780 3 339 2.13e-48 178
MS.gene031528.t1 AT3G63480 36.740 362 193 16 434 780 3 343 3.94e-48 177
MS.gene031528.t1 AT1G59540 36.443 343 186 10 435 770 4 321 4.80e-48 183
MS.gene031528.t1 AT5G60930 34.160 363 201 11 435 771 7 357 2.53e-46 179
MS.gene031528.t1 AT5G60930 34.160 363 201 11 435 771 7 357 2.75e-46 179
MS.gene031528.t1 AT5G60930 34.160 363 201 11 435 771 7 357 3.06e-46 179
MS.gene031528.t1 AT1G18550 36.949 295 162 7 481 771 204 478 1.20e-44 172
MS.gene031528.t1 AT1G12430 32.249 369 196 12 435 775 71 413 2.97e-43 169
MS.gene031528.t1 AT1G12430 32.249 369 196 12 435 775 71 413 3.03e-43 169
MS.gene031528.t1 AT2G21380 36.565 361 192 12 427 780 97 427 4.87e-43 169
MS.gene031528.t1 AT2G21380 36.565 361 192 12 427 780 97 427 4.87e-43 169
MS.gene031528.t1 AT3G54870 34.603 315 168 9 475 771 144 438 6.86e-43 168
MS.gene031528.t1 AT3G54870 34.603 315 168 9 475 771 144 438 7.33e-43 168
MS.gene031528.t1 AT3G54870 34.603 315 168 9 475 771 144 438 7.46e-43 168
MS.gene031528.t1 AT4G39050 35.484 372 203 12 418 782 82 423 9.13e-43 168
MS.gene031528.t1 AT3G50240 39.350 277 139 6 520 771 3 275 1.36e-42 167
MS.gene031528.t1 AT5G06670 34.746 354 198 10 429 776 61 387 3.97e-42 166
MS.gene031528.t1 AT5G06670 34.746 354 198 10 429 776 61 387 3.97e-42 166
MS.gene031528.t1 AT1G01950 32.703 370 201 12 431 775 57 403 4.35e-42 166
MS.gene031528.t1 AT1G01950 32.703 370 201 12 431 775 57 403 4.85e-42 166
MS.gene031528.t1 AT1G01950 32.703 370 201 12 431 775 57 403 6.35e-42 165
MS.gene031528.t1 AT5G06670 34.746 354 198 10 429 776 61 387 7.82e-42 164
MS.gene031528.t1 AT5G06670 34.746 354 198 10 429 776 61 387 8.75e-42 164
MS.gene031528.t1 AT5G06670 34.746 354 198 10 429 776 61 387 8.75e-42 164
MS.gene031528.t1 AT5G06670 34.746 354 198 10 429 776 61 387 8.75e-42 164
MS.gene031528.t1 AT3G49650 36.306 314 175 7 470 778 54 347 3.13e-41 162
MS.gene031528.t1 AT5G27950 39.592 245 137 4 534 775 3 239 3.18e-41 157
MS.gene031528.t1 AT1G21730 35.014 357 197 11 431 780 72 400 1.41e-40 161
MS.gene031528.t1 AT5G06670 34.160 363 197 11 429 776 61 396 1.48e-40 161
MS.gene031528.t1 AT5G06670 34.160 363 197 11 429 776 61 396 1.48e-40 161
MS.gene031528.t1 AT1G18370 36.242 298 160 8 480 771 77 350 4.32e-40 160
MS.gene031528.t1 AT3G12020 33.618 351 200 10 432 776 67 390 2.06e-39 157
MS.gene031528.t1 AT3G12020 33.618 351 200 10 432 776 67 390 2.06e-39 157
MS.gene031528.t1 AT3G12020 33.333 351 201 9 432 776 67 390 4.33e-39 157
MS.gene031528.t1 AT3G12020 33.333 351 201 9 432 776 67 390 4.33e-39 157
MS.gene031528.t1 AT3G16060 33.903 351 199 7 435 777 170 495 9.42e-39 154
MS.gene031528.t1 AT3G43210 37.415 294 153 7 481 768 74 342 1.65e-38 154
MS.gene031528.t1 AT3G43210 37.415 294 153 7 481 768 74 342 1.65e-38 154
MS.gene031528.t1 AT3G43210 37.415 294 153 7 481 768 74 342 1.65e-38 154
MS.gene031528.t1 AT3G43210 37.415 294 153 7 481 768 74 342 1.65e-38 154
MS.gene031528.t1 AT3G43210 37.415 294 153 7 481 768 74 342 1.65e-38 154
MS.gene031528.t1 AT3G51150 35.880 301 153 8 480 769 65 336 2.90e-38 154
MS.gene031528.t1 AT3G51150 35.880 301 153 8 480 769 65 336 2.90e-38 154
MS.gene031528.t1 AT3G51150 35.880 301 153 8 480 769 65 336 2.90e-38 154
MS.gene031528.t1 AT3G51150 35.880 301 153 8 480 769 65 336 3.61e-38 154
MS.gene031528.t1 AT4G38950 34.122 296 163 6 480 768 59 329 6.99e-38 152
MS.gene031528.t1 AT4G38950 34.122 296 163 6 480 768 59 329 6.99e-38 152
MS.gene031528.t1 AT4G38950 34.122 296 163 6 480 768 59 329 6.99e-38 152
MS.gene031528.t1 AT4G38950 34.122 296 163 6 480 768 59 329 6.99e-38 152
MS.gene031528.t1 AT4G38950 34.122 296 163 6 480 768 59 329 6.99e-38 152
MS.gene031528.t1 AT4G24170 35.762 302 157 8 478 769 47 321 1.08e-36 149
MS.gene031528.t1 AT4G24170 35.762 302 157 8 478 769 47 321 1.08e-36 149
MS.gene031528.t1 AT5G66310 35.354 297 160 7 480 769 66 337 1.10e-36 149
MS.gene031528.t1 AT5G66310 35.354 297 160 7 480 769 66 337 1.10e-36 149
MS.gene031528.t1 AT5G66310 35.354 297 160 7 480 769 66 337 1.10e-36 149
MS.gene031528.t1 AT3G20150 33.016 315 174 8 481 773 136 435 3.36e-36 147
MS.gene031528.t1 AT3G20150 33.016 315 174 8 481 773 136 435 3.40e-36 147
MS.gene031528.t1 AT5G02370 31.250 352 192 12 434 770 20 336 7.23e-36 144
MS.gene031528.t1 AT3G16630 31.476 359 199 7 435 773 194 525 2.25e-35 144
MS.gene031528.t1 AT3G16630 31.476 359 199 7 435 773 194 525 2.25e-35 144
MS.gene031528.t1 AT1G59540 36.981 265 142 6 534 792 3 248 1.04e-34 142
MS.gene031528.t1 AT2G21300 33.557 298 162 8 480 768 70 340 1.28e-34 142
MS.gene031528.t1 AT2G21300 33.557 298 162 8 480 768 70 340 1.28e-34 142
MS.gene031528.t1 AT2G21300 33.557 298 162 8 480 768 70 340 1.28e-34 142
MS.gene031528.t1 AT2G21300 33.557 298 162 8 480 768 70 340 1.28e-34 142
MS.gene031528.t1 AT2G21300 33.557 298 162 8 480 768 70 340 1.28e-34 142
MS.gene031528.t1 AT4G14330 31.476 359 210 14 443 785 42 380 6.50e-33 137
MS.gene031528.t1 AT1G01950 34.276 283 142 9 516 775 1 262 1.28e-32 135
MS.gene031528.t1 AT5G42490 34.836 244 127 8 480 717 55 272 5.35e-24 108
MS.gene031528.t1 AT5G42490 34.836 244 127 8 480 717 55 272 5.95e-24 108
MS.gene031528.t1 AT5G65460 33.014 209 121 3 562 770 13 202 3.38e-23 106
MS.gene031528.t1 AT3G51150 41.975 162 77 4 618 769 29 183 1.19e-21 101
MS.gene031528.t1 AT5G23910 27.097 310 191 11 476 784 54 329 2.36e-16 84.0
MS.gene031528.t1 AT5G23910 27.097 310 191 11 476 784 50 325 2.39e-16 84.0
MS.gene031528.t1 AT1G20060 28.873 284 164 8 483 751 165 425 5.56e-14 76.6
MS.gene031528.t1 AT1G20060 28.873 284 164 8 483 751 165 425 6.05e-14 76.6
MS.gene031528.t1 AT1G20060 28.873 284 164 8 483 751 165 425 6.41e-14 76.3
MS.gene031528.t1 AT1G20060 28.873 284 164 8 483 751 165 425 6.59e-14 76.3
MS.gene031528.t1 AT1G20060 28.873 284 164 8 483 751 165 425 6.59e-14 76.3
MS.gene031528.t1 AT1G20060 28.873 284 164 8 483 751 165 425 6.59e-14 76.3
MS.gene031528.t1 AT1G20060 28.873 284 164 8 483 751 165 425 7.12e-14 76.3
MS.gene031528.t1 AT1G20060 28.873 284 164 8 483 751 165 425 7.44e-14 76.3
MS.gene031528.t1 AT1G20060 28.873 284 164 8 483 751 165 425 7.84e-14 76.3

Find 148 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACAAGAGATATACCATTT+TGG 0.187916 4.2:-28148595 None:intergenic
AAAATTACACAATACCATTT+TGG 0.194447 4.2:+28148365 MS.gene031528:CDS
ACAATCAAACATGACGTAAA+TGG 0.257325 4.2:+28149397 MS.gene031528:CDS
GAAAGAAAGGTTTAATTATA+AGG 0.258842 4.2:+28146081 MS.gene031528:CDS
CCTGGACATCCTGATGAAAA+AGG 0.267155 4.2:+28149084 MS.gene031528:CDS
CCAGAAGTTTCCATTGATAA+TGG 0.291607 4.2:-28148554 None:intergenic
GTGTTCACTCTTCGAATATA+TGG 0.292968 4.2:+28149797 MS.gene031528:CDS
ATATGGTGGATTATATAAAA+AGG 0.299359 4.2:+28146556 MS.gene031528:CDS
TTAGGAAAGATGTGAAAATA+TGG 0.299763 4.2:+28146539 MS.gene031528:intron
TGCCTTATTCTTCCATTAAT+CGG 0.302133 4.2:-28145923 None:intergenic
GGTTCAATGAATTACCAAAA+TGG 0.302426 4.2:-28148379 None:intergenic
CAAATTTAAAAGAATGCTTC+TGG 0.303819 4.2:-28148718 None:intergenic
AGCAATGCTGGATCGGATTA+TGG 0.321476 4.2:+28146001 MS.gene031528:CDS
AGGAAGATCATGTGCCATTC+AGG 0.324338 4.2:+28150206 MS.gene031528:CDS
AGAGTAAATGCTTGTGAGAT+TGG 0.335718 4.2:+28150478 MS.gene031528:CDS
TGGCACATGATCTTCCTTCT+TGG 0.336040 4.2:-28150200 None:intergenic
CCATTATCAATGGAAACTTC+TGG 0.339393 4.2:+28148554 MS.gene031528:CDS
AAGATCATCCTTCTGCTTTG+TGG 0.340847 4.2:-28147728 None:intergenic
TTGATTGTGTATTGCTTTCC+AGG 0.340915 4.2:-28149382 None:intergenic
TCAGAATATAAACTTATAGA+AGG 0.341562 4.2:+28148327 MS.gene031528:CDS
TTTACAAGAGAAATTGATAA+AGG 0.345900 4.2:+28146862 MS.gene031528:CDS
AAGTGCTCTTGATGGTTATA+AGG 0.346220 4.2:+28148805 MS.gene031528:CDS
GATGTATCACGCGTGGAAAA+TGG 0.352045 4.2:+28149355 MS.gene031528:CDS
GGAGAACTCTTGCATTGAAT+TGG 0.352306 4.2:+28147867 MS.gene031528:CDS
GCCTATGGTCAAACAGGATC+AGG 0.373014 4.2:+28149036 MS.gene031528:CDS
ATCTTTGCCTATGGTCAAAC+AGG 0.382932 4.2:+28149030 MS.gene031528:CDS
TCATGAAACTAAAAGAATCT+AGG 0.388183 4.2:+28147845 MS.gene031528:CDS
CTCCGATTAATGGAAGAATA+AGG 0.389381 4.2:+28145921 MS.gene031528:CDS
CTTGTACAAAGTGCTCTTGA+TGG 0.389788 4.2:+28148797 MS.gene031528:CDS
ATGGTGGAGACTCCGATTAA+TGG 0.397749 4.2:+28145911 MS.gene031528:CDS
AGGTCTTCCCATCATTGTAT+AGG 0.402460 4.2:-28149064 None:intergenic
TCAGAACACCTTGTACTTGT+TGG 0.402581 4.2:-28149964 None:intergenic
CATATCACCTGATCCTTCTT+CGG 0.408441 4.2:+28150420 MS.gene031528:CDS
GGAATTGACCTAGCCCAAAA+TGG 0.409411 4.2:+28148581 MS.gene031528:CDS
CTGAATCTAATTGACCTTGC+TGG 0.411776 4.2:+28149983 MS.gene031528:CDS
CGCGTGGAAAATGGTACTCC+TGG 0.426949 4.2:+28149364 MS.gene031528:CDS
ATACCTGAGTTTCTCTCAAC+CGG 0.433179 4.2:-28150042 None:intergenic
TAGGTTTGCATCTTTGCCTA+TGG 0.434502 4.2:+28149021 MS.gene031528:intron
GACATTAAAAGCAAATGAAC+TGG 0.438610 4.2:+28147897 MS.gene031528:CDS
ATTGAAAGAGAATCAAATAA+AGG 0.441172 4.2:+28148017 MS.gene031528:CDS
TCTGTGCCACGACTTTCATC+TGG 0.453608 4.2:-28148512 None:intergenic
GATGTGTGTGTGAGTGATAA+TGG 0.455909 4.2:-28145700 None:intergenic
ATTCAGTTATCCATTATCAA+TGG 0.455935 4.2:+28148544 MS.gene031528:CDS
AGTAGCTCGTCTCAAGGTCT+TGG 0.457932 4.2:-28146602 None:intergenic
AGCCGCAGAGAAGAAATTGC+AGG 0.462812 4.2:+28148059 MS.gene031528:CDS
ATGATTAAACAGCCTTGTCT+TGG 0.465469 4.2:+28150367 MS.gene031528:intron
TTTGCGCTTGAGATAATTGA+CGG 0.466217 4.2:-28147807 None:intergenic
AGTGCTCCTCCGAGCAATGC+TGG 0.470399 4.2:+28145989 MS.gene031528:CDS
CTTTCAAAGAGTGGTTCAAC+CGG 0.471546 4.2:+28150016 MS.gene031528:CDS
TTAAACAGCCTTGTCTTGGC+GGG 0.484406 4.2:+28150371 MS.gene031528:intron
CCCTGATCCTGTTTGACCAT+AGG 0.486954 4.2:-28149037 None:intergenic
AGGGAAAACCTATACAATGA+TGG 0.487535 4.2:+28149056 MS.gene031528:CDS
TAAATCAAGCTGCAAATAGC+AGG 0.488065 4.2:+28149485 MS.gene031528:CDS
GGCTTAAGGTTTGTATCAGA+TGG 0.488434 4.2:+28146577 MS.gene031528:CDS
AGAGATGCTGCTCAAAATCA+AGG 0.490393 4.2:+28146790 MS.gene031528:intron
TTAATAGTCTTCTCAAGAAG+AGG 0.493160 4.2:+28147705 MS.gene031528:intron
TCCTCCGAGCAATGCTGGAT+CGG 0.494690 4.2:+28145994 MS.gene031528:CDS
GAGAACATCGCCATGCTAAA+GGG 0.497657 4.2:+28147384 MS.gene031528:CDS
TCTCCACCATTGTTTCTAGC+AGG 0.498530 4.2:-28145898 None:intergenic
AGTCTCAACAACCTCAAGGC+TGG 0.498705 4.2:+28149148 MS.gene031528:CDS
CATGAAACTAAAAGAATCTA+GGG 0.501905 4.2:+28147846 MS.gene031528:CDS
GGAGAACATCGCCATGCTAA+AGG 0.503104 4.2:+28147383 MS.gene031528:CDS
CGACTTTCATCTGGCAACAA+AGG 0.504138 4.2:-28148503 None:intergenic
CATATTTGCCTTGGCCAAGA+AGG 0.504143 4.2:+28150186 MS.gene031528:CDS
GTAAGCTTTGAGTTCCTGAA+TGG 0.504300 4.2:-28150220 None:intergenic
AGAAAAGAGGGTACCTCTGA+AGG 0.504818 4.2:-28145730 None:intergenic
CTTTAACAGTTGTGAATGGC+GGG 0.505806 4.2:+28145948 MS.gene031528:CDS
TGGTTACCAAAATTCAAAAC+CGG 0.508924 4.2:+28145674 MS.gene031528:CDS
AGTTTCTCTCAACCGGTCAC+CGG 0.509568 4.2:-28150035 None:intergenic
TCACCTGATCCTTCTTCGGT+TGG 0.511165 4.2:+28150424 MS.gene031528:CDS
AGTGACTCGCCAACCGAAGA+AGG 0.511481 4.2:-28150433 None:intergenic
GGAAAAGTTAAAGAATTCAC+TGG 0.512627 4.2:+28146635 MS.gene031528:CDS
TCGCCAACCGAAGAAGGATC+AGG 0.514072 4.2:-28150427 None:intergenic
ATTAAACAGCCTTGTCTTGG+CGG 0.514238 4.2:+28150370 MS.gene031528:intron
GACGAGCTACTCAATAGATC+AGG 0.514609 4.2:+28146614 MS.gene031528:CDS
ATGATCTTCCTTCTTGGCCA+AGG 0.523814 4.2:-28150194 None:intergenic
CAAGCTTTAACAGTTGTGAA+TGG 0.525226 4.2:+28145944 MS.gene031528:CDS
CATTTACTCTAGAAGCAAAC+CGG 0.529939 4.2:-28150465 None:intergenic
TTATAGAAGGGGAGAGGCTG+CGG 0.534444 4.2:+28148340 MS.gene031528:CDS
GGGAAAACCTATACAATGAT+GGG 0.535898 4.2:+28149057 MS.gene031528:CDS
CAGAATATAAACTTATAGAA+GGG 0.536777 4.2:+28148328 MS.gene031528:CDS
GGAAAGATGTGAAAATATGG+TGG 0.536845 4.2:+28146542 MS.gene031528:intron
GTGAATGGCGGGCACGATGT+TGG 0.538827 4.2:+28145959 MS.gene031528:CDS
TGTAGATAATAAATCGCGAA+TGG 0.540795 4.2:-28149317 None:intergenic
AGAGTCAGTAGCGCGGCCAT+TGG 0.545473 4.2:-28150518 None:intergenic
CAAACGTGTAGAGAAAGAAA+AGG 0.546172 4.2:+28147350 MS.gene031528:CDS
GAGGGTACCTCTGAAGGGGT+TGG 0.550883 4.2:-28145724 None:intergenic
GCCTCACGCGACAGAATACA+CGG 0.553941 4.2:-28148481 None:intergenic
GAAAAGAGGGTACCTCTGAA+GGG 0.554971 4.2:-28145729 None:intergenic
GAGACAAGGACAGAATTTGA+AGG 0.556299 4.2:+28148261 MS.gene031528:CDS
CTTATACATTTCATTGAGCG+AGG 0.556900 4.2:-28147247 None:intergenic
GAGTGATGTCATATTTGCCT+TGG 0.561542 4.2:+28150177 MS.gene031528:CDS
AAAGGAAGAAGCAGAGAAGT+CGG 0.562965 4.2:+28146880 MS.gene031528:CDS
CGCTCAATGAAATGTATAAG+CGG 0.563639 4.2:+28147250 MS.gene031528:CDS
TGTTTCTGATCTTACAGTAG+TGG 0.564567 4.2:+28149429 MS.gene031528:CDS
GCTGCTCAAAATCAAGGAAG+AGG 0.565783 4.2:+28146796 MS.gene031528:CDS
TCGAATATATGGTGTAAATG+AGG 0.566475 4.2:+28149808 MS.gene031528:CDS
AGAGTGGTTCAACCGGTGAC+CGG 0.567009 4.2:+28150023 MS.gene031528:CDS
ATCTACAAACAGATCATCAT+CGG 0.569372 4.2:+28149333 MS.gene031528:CDS
AGGCTGGAAATACGAAATGC+AGG 0.571436 4.2:+28149164 MS.gene031528:CDS
AGTGAAGTTTATTCTATGAG+AGG 0.574758 4.2:+28147754 MS.gene031528:CDS
AGCGAGCGTCTTTCAAAGAG+TGG 0.576346 4.2:+28150007 MS.gene031528:CDS
TAAACAGCCTTGTCTTGGCG+GGG 0.576562 4.2:+28150372 MS.gene031528:intron
AGAAGAGGCCACAAAGCAGA+AGG 0.576631 4.2:+28147720 MS.gene031528:CDS
TGCTCGGAGGAGCACTACTT+AGG 0.579363 4.2:-28145982 None:intergenic
ATTTCGTATTTCCAGCCTTG+AGG 0.579367 4.2:-28149159 None:intergenic
TTGTAAATACAAGGCTGCAG+TGG 0.581447 4.2:+28146994 MS.gene031528:intron
GATGAAAGTCGTGGCACAGA+AGG 0.582134 4.2:+28148515 MS.gene031528:CDS
AGCACTGACCAACAAGTACA+AGG 0.583674 4.2:+28149956 MS.gene031528:CDS
AGAATATAAACTTATAGAAG+GGG 0.584502 4.2:+28148329 MS.gene031528:CDS
AGACAAGGACAGAATTTGAA+GGG 0.588012 4.2:+28148262 MS.gene031528:CDS
TAATCCGATCCAGCATTGCT+CGG 0.591880 4.2:-28145998 None:intergenic
ATAAACTTATAGAAGGGGAG+AGG 0.592107 4.2:+28148334 MS.gene031528:CDS
CACATCTCCAACCCCTTCAG+AGG 0.594814 4.2:+28145717 MS.gene031528:CDS
GCTTTAACAGTTGTGAATGG+CGG 0.596409 4.2:+28145947 MS.gene031528:CDS
TACCTGCAATTTCTTCTCTG+CGG 0.598092 4.2:-28148061 None:intergenic
TTTGAGTCCCCGCCAAGACA+AGG 0.599113 4.2:-28150379 None:intergenic
TGACCGGTTGAGAGAAACTC+AGG 0.600341 4.2:+28150039 MS.gene031528:CDS
ACACCTCGTCGTCAGACCAA+TGG 0.603841 4.2:+28150502 MS.gene031528:CDS
CCTATGGTCAAACAGGATCA+GGG 0.605281 4.2:+28149037 MS.gene031528:CDS
AAGCAAGGCTTGATATTGAG+AGG 0.606395 4.2:+28147038 MS.gene031528:CDS
GATTCAAAGTGCAAATCAGA+AGG 0.607548 4.2:+28147105 MS.gene031528:CDS
CGGCCATTGGTCTGACGACG+AGG 0.613765 4.2:-28150505 None:intergenic
TATACAATGATGGGAAGACC+TGG 0.618927 4.2:+28149066 MS.gene031528:CDS
GAAAGAAAAGGCTACTGCAG+AGG 0.619356 4.2:+28147362 MS.gene031528:CDS
AGTAAGTTGACCCTTTAGCA+TGG 0.622488 4.2:-28147394 None:intergenic
TCCGTGTATTCTGTCGCGTG+AGG 0.624664 4.2:+28148480 MS.gene031528:CDS
GCGAGTCACTATGCTCACTC+CGG 0.627787 4.2:+28150446 MS.gene031528:CDS
ATTAAAAGCAAATGAACTGG+AGG 0.630590 4.2:+28147900 MS.gene031528:CDS
TCAATGGAAACTTCTGGACG+AGG 0.630866 4.2:+28148560 MS.gene031528:CDS
ACTACTCTTTCCGAGGACCT+CGG 0.636188 4.2:+28147067 MS.gene031528:CDS
AAAAGAGGGTACCTCTGAAG+GGG 0.638735 4.2:-28145728 None:intergenic
ACAAGTTTACAACAGTACAA+TGG 0.639259 4.2:+28147288 MS.gene031528:CDS
TAAGCACCTGCTAGAAACAA+TGG 0.641863 4.2:+28145892 MS.gene031528:CDS
GTGTGAGTGATAATGGAGGC+CGG 0.651317 4.2:-28145693 None:intergenic
CTATTGAGTAGCTCGTCTCA+AGG 0.652521 4.2:-28146608 None:intergenic
ATCATCGGATGTATCACGCG+TGG 0.653768 4.2:+28149348 MS.gene031528:CDS
GTCACATACTACTCTTTCCG+AGG 0.654450 4.2:+28147060 MS.gene031528:CDS
AAACAGTCTCAACAACCTCA+AGG 0.655111 4.2:+28149144 MS.gene031528:CDS
AAAGACGCTCGCTACCAGCA+AGG 0.659107 4.2:-28149997 None:intergenic
TTTCTAAAGAGAGAGAAGCA+AGG 0.661679 4.2:+28147023 MS.gene031528:CDS
ATGTATCTGTATTCGAGACA+AGG 0.666554 4.2:+28148247 MS.gene031528:CDS
AATATTTGTTCTAACGAACG+AGG 0.684845 4.2:-28149114 None:intergenic
GCACCTGCTAGAAACAATGG+TGG 0.685189 4.2:+28145895 MS.gene031528:CDS
TCCGATCCAGCATTGCTCGG+AGG 0.699371 4.2:-28145995 None:intergenic
TTGTTGCCAGATGAAAGTCG+TGG 0.713598 4.2:+28148506 MS.gene031528:CDS
TCAAACGAGAGTCAGTAGCG+CGG 0.759318 4.2:-28150525 None:intergenic
GTGTGTGTGAGTGATAATGG+AGG 0.786079 4.2:-28145697 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATCTTTATTAGATTAAAA+TGG + chr4.2:28149589-28149608 MS.gene031528:intron 10.0%
!!! ATTTTTTTCCAAAATTTAAA+AGG - chr4.2:28146930-28146949 None:intergenic 10.0%
!! AAAATATCTTTGTAAATACA+AGG + chr4.2:28146985-28147004 MS.gene031528:intron 15.0%
!! ATAAATAAATCTAGACATAT+TGG - chr4.2:28146759-28146778 None:intergenic 15.0%
!! TAGTTATGATCTTATTAAAT+TGG + chr4.2:28148664-28148683 MS.gene031528:intron 15.0%
!! TTGGAAAAAAATAATATGAA+AGG + chr4.2:28146938-28146957 MS.gene031528:intron 15.0%
!!! AAATATGATGTTTTCATTTT+AGG + chr4.2:28149002-28149021 MS.gene031528:intron 15.0%
!!! AACATAATTTGATATGATTT+TGG + chr4.2:28149629-28149648 MS.gene031528:intron 15.0%
!!! ATATATTTACTTTTTAACCA+GGG + chr4.2:28146390-28146409 MS.gene031528:intron 15.0%
!!! TATATATTTACTTTTTAACC+AGG + chr4.2:28146389-28146408 MS.gene031528:intron 15.0%
!!! TTTAATTGTATTGATTATTC+TGG + chr4.2:28149711-28149730 MS.gene031528:intron 15.0%
!! AAAACTGAGATTGTTTAATA+AGG - chr4.2:28148439-28148458 None:intergenic 20.0%
!! AACAAAATTTCAAACTTGAA+CGG - chr4.2:28146108-28146127 None:intergenic 20.0%
!! AAGGAAATTGAATAATATAC+CGG - chr4.2:28147678-28147697 None:intergenic 20.0%
!! AATATCAAGTTCAATGTATA+TGG + chr4.2:28146188-28146207 MS.gene031528:intron 20.0%
!! ACTTTCTTTATTCAAACTTA+AGG - chr4.2:28146310-28146329 None:intergenic 20.0%
!! AGAATATAAACTTATAGAAG+GGG + chr4.2:28148329-28148348 MS.gene031528:CDS 20.0%
!! ATAGTGTGATATTTAATAGA+AGG - chr4.2:28147946-28147965 None:intergenic 20.0%
!! ATATTTAATAGAAGGAAATC+AGG - chr4.2:28147938-28147957 None:intergenic 20.0%
!! ATTGAAAGAGAATCAAATAA+AGG + chr4.2:28148017-28148036 MS.gene031528:CDS 20.0%
!! CAGAATATAAACTTATAGAA+GGG + chr4.2:28148328-28148347 MS.gene031528:CDS 20.0%
!! CTTATAATCAACAAATCTTT+CGG - chr4.2:28148403-28148422 None:intergenic 20.0%
!! GAAAAAAAAAAAAAACACTG+TGG - chr4.2:28150074-28150093 None:intergenic 20.0%
!! GAAAGAAAGGTTTAATTATA+AGG + chr4.2:28146081-28146100 MS.gene031528:CDS 20.0%
!! TATTTCAGAATAAATCCAAA+TGG - chr4.2:28148987-28149006 None:intergenic 20.0%
!! TCAATTAAGTTCAATAACTT+AGG - chr4.2:28147615-28147634 None:intergenic 20.0%
!! TCAGAATATAAACTTATAGA+AGG + chr4.2:28148327-28148346 MS.gene031528:CDS 20.0%
!! TTAATTATTGTCTTCATTGA+TGG + chr4.2:28147210-28147229 MS.gene031528:intron 20.0%
!! TTCATTTATCATTTGTAATC+AGG + chr4.2:28150129-28150148 MS.gene031528:intron 20.0%
!! TTTACAAGAGAAATTGATAA+AGG + chr4.2:28146862-28146881 MS.gene031528:CDS 20.0%
!!! AAAATTACACAATACCATTT+TGG + chr4.2:28148365-28148384 MS.gene031528:CDS 20.0%
!!! AAGCAAAAAAGTATAGAAAT+CGG + chr4.2:28146666-28146685 MS.gene031528:CDS 20.0%
!!! AATGTAACTCTATGTTTTTT+AGG + chr4.2:28146521-28146540 MS.gene031528:intron 20.0%
!!! ATATCGTTTTTCTTATTCAA+AGG - chr4.2:28146501-28146520 None:intergenic 20.0%
!!! ATATGGTGGATTATATAAAA+AGG + chr4.2:28146556-28146575 MS.gene031528:CDS 20.0%
!!! ATATTTTGAAATGAGAAAAG+AGG - chr4.2:28145746-28145765 None:intergenic 20.0%
!!! ATCGAATTCTAGTTATAAAA+TGG - chr4.2:28149550-28149569 None:intergenic 20.0%
!!! ATTAAACCTTTCTTTCTTTT+TGG - chr4.2:28146077-28146096 None:intergenic 20.0%
!!! CAACATGATAATGATAATAA+TGG - chr4.2:28148196-28148215 None:intergenic 20.0%
!!! GTTCTTGTTATAAAATTTTC+AGG + chr4.2:28149267-28149286 MS.gene031528:intron 20.0%
!!! TAACTTGTGTTTAAATACTA+CGG - chr4.2:28146284-28146303 None:intergenic 20.0%
!!! TATTTTGAAATGAGAAAAGA+GGG - chr4.2:28145745-28145764 None:intergenic 20.0%
!!! TTTTCAAAGCTTATTATGAT+TGG - chr4.2:28146969-28146988 None:intergenic 20.0%
! AAAAAGCCAAAAAGAAAGAA+AGG + chr4.2:28146068-28146087 MS.gene031528:CDS 25.0%
! AATTGCATATGTTTCTTGTT+AGG + chr4.2:28148218-28148237 MS.gene031528:intron 25.0%
! ATCTATCAATGCTACATATA+AGG + chr4.2:28148898-28148917 MS.gene031528:intron 25.0%
! ATCTTCCATAATCATAACAA+TGG + chr4.2:28149895-28149914 MS.gene031528:intron 25.0%
! ATTCAGTTATCCATTATCAA+TGG + chr4.2:28148544-28148563 MS.gene031528:CDS 25.0%
! CAAATTTAAAAGAATGCTTC+TGG - chr4.2:28148721-28148740 None:intergenic 25.0%
! CATGAAACTAAAAGAATCTA+GGG + chr4.2:28147846-28147865 MS.gene031528:CDS 25.0%
! GGATTATATAAAAAGGCTTA+AGG + chr4.2:28146563-28146582 MS.gene031528:CDS 25.0%
! GGTATATTATTCAATTTCCT+TGG + chr4.2:28147677-28147696 MS.gene031528:intron 25.0%
! TACATTACAATGCAATAATG+AGG - chr4.2:28149219-28149238 None:intergenic 25.0%
! TATCTTACAAAAAACACAAG+TGG - chr4.2:28148136-28148155 None:intergenic 25.0%
! TCATGAAACTAAAAGAATCT+AGG + chr4.2:28147845-28147864 MS.gene031528:CDS 25.0%
! TGAAATAAAATAAGCACAGA+TGG - chr4.2:28150096-28150115 None:intergenic 25.0%
! TTAGATTAAAATGGACAAAC+TGG + chr4.2:28149598-28149617 MS.gene031528:intron 25.0%
! TTAGGAAAGATGTGAAAATA+TGG + chr4.2:28146539-28146558 MS.gene031528:intron 25.0%
! TTATGATTATGGAAGATTGA+GGG - chr4.2:28149892-28149911 None:intergenic 25.0%
! TTTATTATTAGAGTCATGAC+AGG + chr4.2:28147966-28147985 MS.gene031528:intron 25.0%
!! ATTCACCTCATTTTAAATTC+TGG + chr4.2:28145777-28145796 MS.gene031528:intron 25.0%
!! ATTGAAGTTTCAGAATTTTG+TGG + chr4.2:28145865-28145884 MS.gene031528:intron 25.0%
!! ATTGGAATTCAAGTTAGAAT+AGG + chr4.2:28147458-28147477 MS.gene031528:intron 25.0%
!! GATGATTATTTCTTTGTCAT+TGG + chr4.2:28150304-28150323 MS.gene031528:intron 25.0%
!! GTCTTTTGCCTTTTAAATTT+TGG + chr4.2:28146919-28146938 MS.gene031528:intron 25.0%
!! TTCACCTCATTTTAAATTCT+GGG + chr4.2:28145778-28145797 MS.gene031528:intron 25.0%
!! TTGAAGTTTCAGAATTTTGT+GGG + chr4.2:28145866-28145885 MS.gene031528:intron 25.0%
!! TTTTATAACAAGAACCATCT+CGG - chr4.2:28149262-28149281 None:intergenic 25.0%
!!! AGTTTTAACAGGAGTTAAAA+GGG + chr4.2:28148453-28148472 MS.gene031528:intron 25.0%
!!! GATTTCTATACTTTTTTGCT+TGG - chr4.2:28146667-28146686 None:intergenic 25.0%
!!! TAAACAATCTCAGTTTTAAC+AGG + chr4.2:28148442-28148461 MS.gene031528:intron 25.0%
!!! TCATTTTTCACATTTTTCCT+TGG + chr4.2:28148860-28148879 MS.gene031528:intron 25.0%
AATATTTGTTCTAACGAACG+AGG - chr4.2:28149117-28149136 None:intergenic 30.0%
ACAAGTTTACAACAGTACAA+TGG + chr4.2:28147288-28147307 MS.gene031528:CDS 30.0%
ACAATCAAACATGACGTAAA+TGG + chr4.2:28149397-28149416 MS.gene031528:CDS 30.0%
ACTCATTCTTTATCTTCTTC+TGG + chr4.2:28147490-28147509 MS.gene031528:intron 30.0%
AGTGAAGTTTATTCTATGAG+AGG + chr4.2:28147754-28147773 MS.gene031528:CDS 30.0%
AGTTTAATTCCTGCAATGAT+TGG - chr4.2:28147186-28147205 None:intergenic 30.0%
ATAACTATCCTAAGCTGTTA+TGG - chr4.2:28148164-28148183 None:intergenic 30.0%
ATATAGAACCATAACAGCTT+AGG + chr4.2:28148153-28148172 MS.gene031528:intron 30.0%
ATCTACAAACAGATCATCAT+CGG + chr4.2:28149333-28149352 MS.gene031528:CDS 30.0%
ATTAAAAGCAAATGAACTGG+AGG + chr4.2:28147900-28147919 MS.gene031528:CDS 30.0%
CATGTAGTATTCTTGTAAAC+TGG + chr4.2:28146257-28146276 MS.gene031528:intron 30.0%
CTCATTCTTTATCTTCTTCT+GGG + chr4.2:28147491-28147510 MS.gene031528:intron 30.0%
GAAGAAGAAAAAAAGTGGAA+AGG - chr4.2:28147164-28147183 None:intergenic 30.0%
GAAGACTATTAAAAGAACCA+AGG - chr4.2:28147697-28147716 None:intergenic 30.0%
GACATTAAAAGCAAATGAAC+TGG + chr4.2:28147897-28147916 MS.gene031528:CDS 30.0%
GATTGGAAGAAGAAAAAAAG+TGG - chr4.2:28147169-28147188 None:intergenic 30.0%
GGAAAAGTTAAAGAATTCAC+TGG + chr4.2:28146635-28146654 MS.gene031528:CDS 30.0%
GGTTCAATGAATTACCAAAA+TGG - chr4.2:28148382-28148401 None:intergenic 30.0%
GTAATTATCATTCTCTCACA+TGG + chr4.2:28150256-28150275 MS.gene031528:intron 30.0%
GTTATGATTATGGAAGATTG+AGG - chr4.2:28149893-28149912 None:intergenic 30.0%
TATGATTATGGAAGATTGAG+GGG - chr4.2:28149891-28149910 None:intergenic 30.0%
TCGAATATATGGTGTAAATG+AGG + chr4.2:28149808-28149827 MS.gene031528:CDS 30.0%
TGGTTACCAAAATTCAAAAC+CGG + chr4.2:28145674-28145693 MS.gene031528:CDS 30.0%
TGTAGATAATAAATCGCGAA+TGG - chr4.2:28149320-28149339 None:intergenic 30.0%
TTAATAGTCTTCTCAAGAAG+AGG + chr4.2:28147705-28147724 MS.gene031528:intron 30.0%
TTCTGGCCTAAAAACAAAAT+AGG - chr4.2:28148704-28148723 None:intergenic 30.0%
! ACATCCCAGAATTTAAAATG+AGG - chr4.2:28145785-28145804 None:intergenic 30.0%
! CACAAGAGATATACCATTTT+GGG - chr4.2:28148597-28148616 None:intergenic 30.0%
! CACATGTGATTCTTTTCAAT+TGG + chr4.2:28147440-28147459 MS.gene031528:intron 30.0%
! CATTTTTCCTTGGATTTCTT+TGG + chr4.2:28148870-28148889 MS.gene031528:intron 30.0%
! TCACAAGAGATATACCATTT+TGG - chr4.2:28148598-28148617 None:intergenic 30.0%
! TGCCTTATTCTTCCATTAAT+CGG - chr4.2:28145926-28145945 None:intergenic 30.0%
!! ATTTTGGTGCAACAAAATGT+TGG + chr4.2:28149645-28149664 MS.gene031528:intron 30.0%
!! CAGTTTTAACAGGAGTTAAA+AGG + chr4.2:28148452-28148471 MS.gene031528:intron 30.0%
!! TTTACCGATTTACTTCACTT+CGG + chr4.2:28146697-28146716 MS.gene031528:intron 30.0%
!!! AAATTTTCAGGTGTCAATGT+TGG + chr4.2:28149279-28149298 MS.gene031528:intron 30.0%
!!! GTGACTCCTATTTTGTTTTT+AGG + chr4.2:28148695-28148714 MS.gene031528:intron 30.0%
ACAAAATTGTTGCGTGCTAT+TGG + chr4.2:28148101-28148120 MS.gene031528:intron 35.0%
ACACATACACATCAACCATT+TGG + chr4.2:28148969-28148988 MS.gene031528:intron 35.0%
AGACAAGGACAGAATTTGAA+GGG + chr4.2:28148262-28148281 MS.gene031528:CDS 35.0%
AGAGTAAATGCTTGTGAGAT+TGG + chr4.2:28150478-28150497 MS.gene031528:CDS 35.0%
AGGGAAAACCTATACAATGA+TGG + chr4.2:28149056-28149075 MS.gene031528:CDS 35.0%
ATAAACTTATAGAAGGGGAG+AGG + chr4.2:28148334-28148353 MS.gene031528:CDS 35.0%
ATACGAAATGCAGGTAACAT+TGG + chr4.2:28149173-28149192 MS.gene031528:intron 35.0%
ATCAGAACCAAAGAAATCCA+AGG - chr4.2:28148880-28148899 None:intergenic 35.0%
ATGATACTGCAATGAAACAG+AGG - chr4.2:28145815-28145834 None:intergenic 35.0%
ATGTATCTGTATTCGAGACA+AGG + chr4.2:28148247-28148266 MS.gene031528:CDS 35.0%
CAAACGTGTAGAGAAAGAAA+AGG + chr4.2:28147350-28147369 MS.gene031528:CDS 35.0%
CCAGAAGTTTCCATTGATAA+TGG - chr4.2:28148557-28148576 None:intergenic 35.0%
CCATTATCAATGGAAACTTC+TGG + chr4.2:28148554-28148573 MS.gene031528:CDS 35.0%
CGCTCAATGAAATGTATAAG+CGG + chr4.2:28147250-28147269 MS.gene031528:CDS 35.0%
CTCCGATTAATGGAAGAATA+AGG + chr4.2:28145921-28145940 MS.gene031528:CDS 35.0%
CTCTGGCAGAGAAATAAATT+AGG - chr4.2:28149938-28149957 None:intergenic 35.0%
CTTATACATTTCATTGAGCG+AGG - chr4.2:28147250-28147269 None:intergenic 35.0%
GATTCAAAGTGCAAATCAGA+AGG + chr4.2:28147105-28147124 MS.gene031528:CDS 35.0%
GCATGCCATTGTTATGATTA+TGG - chr4.2:28149903-28149922 None:intergenic 35.0%
GCTCATAGTTTACTCATAAG+TGG + chr4.2:28146233-28146252 MS.gene031528:intron 35.0%
GGAAAGATGTGAAAATATGG+TGG + chr4.2:28146542-28146561 MS.gene031528:intron 35.0%
GGGAAAACCTATACAATGAT+GGG + chr4.2:28149057-28149076 MS.gene031528:CDS 35.0%
GTGTTCACTCTTCGAATATA+TGG + chr4.2:28149797-28149816 MS.gene031528:CDS 35.0%
TAAATCAAGCTGCAAATAGC+AGG + chr4.2:28149485-28149504 MS.gene031528:CDS 35.0%
TCATTTCGTATTCATGCAAC+CGG + chr4.2:28147656-28147675 MS.gene031528:intron 35.0%
TGTGAAAGCAGAACTTACAA+TGG - chr4.2:28147424-28147443 None:intergenic 35.0%
TTGATTGTGTATTGCTTTCC+AGG - chr4.2:28149385-28149404 None:intergenic 35.0%
TTTCTTCTTCCAATCATTGC+AGG + chr4.2:28147174-28147193 MS.gene031528:intron 35.0%
TTTGCGCTTGAGATAATTGA+CGG - chr4.2:28147810-28147829 None:intergenic 35.0%
! AAGTGCTCTTGATGGTTATA+AGG + chr4.2:28148805-28148824 MS.gene031528:CDS 35.0%
! ATGATTAAACAGCCTTGTCT+TGG + chr4.2:28150367-28150386 MS.gene031528:intron 35.0%
! CAAGCTTTAACAGTTGTGAA+TGG + chr4.2:28145944-28145963 MS.gene031528:CDS 35.0%
! CATTTACTCTAGAAGCAAAC+CGG - chr4.2:28150468-28150487 None:intergenic 35.0%
! TGTTTCTGATCTTACAGTAG+TGG + chr4.2:28149429-28149448 MS.gene031528:CDS 35.0%
! TTTCTAAAGAGAGAGAAGCA+AGG + chr4.2:28147023-28147042 MS.gene031528:CDS 35.0%
! TTTTTGAACATGATCCGAGA+TGG + chr4.2:28149245-28149264 MS.gene031528:intron 35.0%
! TTTTTGCCTCTTAGATCTGT+GGG + chr4.2:28149734-28149753 MS.gene031528:intron 35.0%
AAACAGTCTCAACAACCTCA+AGG + chr4.2:28149144-28149163 MS.gene031528:CDS 40.0%
AAAGCAAATGAACTGGAGGT+TGG + chr4.2:28147904-28147923 MS.gene031528:intron 40.0%
AAAGGAAGAAGCAGAGAAGT+CGG + chr4.2:28146880-28146899 MS.gene031528:CDS 40.0%
AAGATCATCCTTCTGCTTTG+TGG - chr4.2:28147731-28147750 None:intergenic 40.0%
AAGCAAGGCTTGATATTGAG+AGG + chr4.2:28147038-28147057 MS.gene031528:CDS 40.0%
AGAGATGCTGCTCAAAATCA+AGG + chr4.2:28146790-28146809 MS.gene031528:intron 40.0%
AGGTCTTCCCATCATTGTAT+AGG - chr4.2:28149067-28149086 None:intergenic 40.0%
ATACCTGAGTTTCTCTCAAC+CGG - chr4.2:28150045-28150064 None:intergenic 40.0%
ATCTTTGCCTATGGTCAAAC+AGG + chr4.2:28149030-28149049 MS.gene031528:CDS 40.0%
ATTTCGTATTTCCAGCCTTG+AGG - chr4.2:28149162-28149181 None:intergenic 40.0%
CATATCACCTGATCCTTCTT+CGG + chr4.2:28150420-28150439 MS.gene031528:CDS 40.0%
CTGAATCTAATTGACCTTGC+TGG + chr4.2:28149983-28150002 MS.gene031528:CDS 40.0%
CTGGACATCCTGATGAAAAA+GGG + chr4.2:28149085-28149104 MS.gene031528:CDS 40.0%
CTTTAACAGTTGTGAATGGC+GGG + chr4.2:28145948-28145967 MS.gene031528:CDS 40.0%
CTTTCAAAGAGTGGTTCAAC+CGG + chr4.2:28150016-28150035 MS.gene031528:CDS 40.0%
GAGACAAGGACAGAATTTGA+AGG + chr4.2:28148261-28148280 MS.gene031528:CDS 40.0%
GAGTGATGTCATATTTGCCT+TGG + chr4.2:28150177-28150196 MS.gene031528:CDS 40.0%
GATCTGAGTAATCAAGCAGT+AGG - chr4.2:28146458-28146477 None:intergenic 40.0%
GATGTGTGTGTGAGTGATAA+TGG - chr4.2:28145703-28145722 None:intergenic 40.0%
GCAAGCAATAGCATTCATCA+CGG - chr4.2:28146724-28146743 None:intergenic 40.0%
GCTTTAACAGTTGTGAATGG+CGG + chr4.2:28145947-28145966 MS.gene031528:CDS 40.0%
GGAGAACTCTTGCATTGAAT+TGG + chr4.2:28147867-28147886 MS.gene031528:CDS 40.0%
GGCTTAAGGTTTGTATCAGA+TGG + chr4.2:28146577-28146596 MS.gene031528:CDS 40.0%
TAAGCACCTGCTAGAAACAA+TGG + chr4.2:28145892-28145911 MS.gene031528:CDS 40.0%
TACCTGCAATTTCTTCTCTG+CGG - chr4.2:28148064-28148083 None:intergenic 40.0%
TAGGTTTGCATCTTTGCCTA+TGG + chr4.2:28149021-28149040 MS.gene031528:intron 40.0%
TCAGAACACCTTGTACTTGT+TGG - chr4.2:28149967-28149986 None:intergenic 40.0%
TTGTAAATACAAGGCTGCAG+TGG + chr4.2:28146994-28147013 MS.gene031528:intron 40.0%
! AGTAAGTTGACCCTTTAGCA+TGG - chr4.2:28147397-28147416 None:intergenic 40.0%
! ATTAAACAGCCTTGTCTTGG+CGG + chr4.2:28150370-28150389 MS.gene031528:intron 40.0%
! CTTGTACAAAGTGCTCTTGA+TGG + chr4.2:28148797-28148816 MS.gene031528:CDS 40.0%
! GAGATATACCATTTTGGGCT+AGG - chr4.2:28148592-28148611 None:intergenic 40.0%
! GTTTTTCCCACAGATCTAAG+AGG - chr4.2:28149743-28149762 None:intergenic 40.0%
! GTTTTTGCCTCTTAGATCTG+TGG + chr4.2:28149733-28149752 MS.gene031528:intron 40.0%
! TATACAATGATGGGAAGACC+TGG + chr4.2:28149066-28149085 MS.gene031528:CDS 40.0%
!! GGTATCAACCCTTTTTCATC+AGG - chr4.2:28149096-28149115 None:intergenic 40.0%
!! GTAAGCTTTGAGTTCCTGAA+TGG - chr4.2:28150223-28150242 None:intergenic 40.0%
AGCAATGCTGGATCGGATTA+TGG + chr4.2:28146001-28146020 MS.gene031528:CDS 45.0%
AGGCTGGAAATACGAAATGC+AGG + chr4.2:28149164-28149183 MS.gene031528:CDS 45.0%
ATCTGTTAGAACAGCAACCC+TGG - chr4.2:28146410-28146429 None:intergenic 45.0%
ATGATCTTCCTTCTTGGCCA+AGG - chr4.2:28150197-28150216 None:intergenic 45.0%
CATATTTGCCTTGGCCAAGA+AGG + chr4.2:28150186-28150205 MS.gene031528:CDS 45.0%
CCTATGGTCAAACAGGATCA+GGG + chr4.2:28149037-28149056 MS.gene031528:CDS 45.0%
CCTGGACATCCTGATGAAAA+AGG + chr4.2:28149084-28149103 MS.gene031528:CDS 45.0%
CGACTTTCATCTGGCAACAA+AGG - chr4.2:28148506-28148525 None:intergenic 45.0%
CGGTCCGAAGTGAAGTAAAT+CGG - chr4.2:28146704-28146723 None:intergenic 45.0%
CTATTGAGTAGCTCGTCTCA+AGG - chr4.2:28146611-28146630 None:intergenic 45.0%
GAAAGAAAAGGCTACTGCAG+AGG + chr4.2:28147362-28147381 MS.gene031528:CDS 45.0%
GACGAGCTACTCAATAGATC+AGG + chr4.2:28146614-28146633 MS.gene031528:CDS 45.0%
GAGAACATCGCCATGCTAAA+GGG + chr4.2:28147384-28147403 MS.gene031528:CDS 45.0%
GATGTATCACGCGTGGAAAA+TGG + chr4.2:28149355-28149374 MS.gene031528:CDS 45.0%
GCTACATATAAGGCACGTCT+TGG + chr4.2:28148908-28148927 MS.gene031528:intron 45.0%
GCTGCTCAAAATCAAGGAAG+AGG + chr4.2:28146796-28146815 MS.gene031528:CDS 45.0%
GGAATTGACCTAGCCCAAAA+TGG + chr4.2:28148581-28148600 MS.gene031528:CDS 45.0%
GTCACATACTACTCTTTCCG+AGG + chr4.2:28147060-28147079 MS.gene031528:CDS 45.0%
TAATCCGATCCAGCATTGCT+CGG - chr4.2:28146001-28146020 None:intergenic 45.0%
TCAATGGAAACTTCTGGACG+AGG + chr4.2:28148560-28148579 MS.gene031528:CDS 45.0%
TGGCACATGATCTTCCTTCT+TGG - chr4.2:28150203-28150222 None:intergenic 45.0%
TTGTTGCCAGATGAAAGTCG+TGG + chr4.2:28148506-28148525 MS.gene031528:CDS 45.0%
! AGGAAGATCATGTGCCATTC+AGG + chr4.2:28150206-28150225 MS.gene031528:CDS 45.0%
! ATGGTGGAGACTCCGATTAA+TGG + chr4.2:28145911-28145930 MS.gene031528:CDS 45.0%
! TTAAACAGCCTTGTCTTGGC+GGG + chr4.2:28150371-28150390 MS.gene031528:intron 45.0%
!! AAAAGAGGGTACCTCTGAAG+GGG - chr4.2:28145731-28145750 None:intergenic 45.0%
!! AGAAAAGAGGGTACCTCTGA+AGG - chr4.2:28145733-28145752 None:intergenic 45.0%
!! AGCACTGACCAACAAGTACA+AGG + chr4.2:28149956-28149975 MS.gene031528:CDS 45.0%
!! CCTTTTTCATCAGGATGTCC+AGG - chr4.2:28149087-28149106 None:intergenic 45.0%
!! GAAAAGAGGGTACCTCTGAA+GGG - chr4.2:28145732-28145751 None:intergenic 45.0%
!! GTGTGTGTGAGTGATAATGG+AGG - chr4.2:28145700-28145719 None:intergenic 45.0%
!! TCTCCACCATTGTTTCTAGC+AGG - chr4.2:28145901-28145920 None:intergenic 45.0%
!!! TGGAGGCCGGTTTTGAATTT+TGG - chr4.2:28145683-28145702 None:intergenic 45.0%
!!! ATATTTGAATTTAAAATTAA+AGG + chr4.2:28146161-28146180 MS.gene031528:intron 5.0%
ACAGGACGAGTTTCTTTCGC+AGG + chr4.2:28147984-28148003 MS.gene031528:intron 50.0%
ACTACTCTTTCCGAGGACCT+CGG + chr4.2:28147067-28147086 MS.gene031528:CDS 50.0%
AGAAGAGGCCACAAAGCAGA+AGG + chr4.2:28147720-28147739 MS.gene031528:CDS 50.0%
AGCCGCAGAGAAGAAATTGC+AGG + chr4.2:28148059-28148078 MS.gene031528:CDS 50.0%
AGCGAGCGTCTTTCAAAGAG+TGG + chr4.2:28150007-28150026 MS.gene031528:CDS 50.0%
AGTAGCTCGTCTCAAGGTCT+TGG - chr4.2:28146605-28146624 None:intergenic 50.0%
AGTCTCAACAACCTCAAGGC+TGG + chr4.2:28149148-28149167 MS.gene031528:CDS 50.0%
AGTTTCTCTCAACCGGTCAC+CGG - chr4.2:28150038-28150057 None:intergenic 50.0%
ATCATCGGATGTATCACGCG+TGG + chr4.2:28149348-28149367 MS.gene031528:CDS 50.0%
CCCTGATCCTGTTTGACCAT+AGG - chr4.2:28149040-28149059 None:intergenic 50.0%
GATGAAAGTCGTGGCACAGA+AGG + chr4.2:28148515-28148534 MS.gene031528:CDS 50.0%
GCACCTGCTAGAAACAATGG+TGG + chr4.2:28145895-28145914 MS.gene031528:CDS 50.0%
GCCTATGGTCAAACAGGATC+AGG + chr4.2:28149036-28149055 MS.gene031528:CDS 50.0%
GGAGAACATCGCCATGCTAA+AGG + chr4.2:28147383-28147402 MS.gene031528:CDS 50.0%
TCAAACGAGAGTCAGTAGCG+CGG - chr4.2:28150528-28150547 None:intergenic 50.0%
TCACCTGATCCTTCTTCGGT+TGG + chr4.2:28150424-28150443 MS.gene031528:CDS 50.0%
TCTGTGCCACGACTTTCATC+TGG - chr4.2:28148515-28148534 None:intergenic 50.0%
TGACCGGTTGAGAGAAACTC+AGG + chr4.2:28150039-28150058 MS.gene031528:CDS 50.0%
TTATAGAAGGGGAGAGGCTG+CGG + chr4.2:28148340-28148359 MS.gene031528:CDS 50.0%
! GTACTTGTTGGTCAGTGCTC+TGG - chr4.2:28149955-28149974 None:intergenic 50.0%
! TAAACAGCCTTGTCTTGGCG+GGG + chr4.2:28150372-28150391 MS.gene031528:intron 50.0%
! TCTCTCGTTCAGCTTTTCCG+AGG - chr4.2:28147087-28147106 None:intergenic 50.0%
! TTCAGCTTTTCCGAGGTCCT+CGG - chr4.2:28147080-28147099 None:intergenic 50.0%
!! GTGTGAGTGATAATGGAGGC+CGG - chr4.2:28145696-28145715 None:intergenic 50.0%
AAAGACGCTCGCTACCAGCA+AGG - chr4.2:28150000-28150019 None:intergenic 55.0%
ACACCTCGTCGTCAGACCAA+TGG + chr4.2:28150502-28150521 MS.gene031528:CDS 55.0%
AGAGTGGTTCAACCGGTGAC+CGG + chr4.2:28150023-28150042 MS.gene031528:CDS 55.0%
AGTGACTCGCCAACCGAAGA+AGG - chr4.2:28150436-28150455 None:intergenic 55.0%
CACATCTCCAACCCCTTCAG+AGG + chr4.2:28145717-28145736 MS.gene031528:CDS 55.0%
CGCGTGGAAAATGGTACTCC+TGG + chr4.2:28149364-28149383 MS.gene031528:CDS 55.0%
GCCTCACGCGACAGAATACA+CGG - chr4.2:28148484-28148503 None:intergenic 55.0%
GCGAGTCACTATGCTCACTC+CGG + chr4.2:28150446-28150465 MS.gene031528:CDS 55.0%
TCCGTGTATTCTGTCGCGTG+AGG + chr4.2:28148480-28148499 MS.gene031528:CDS 55.0%
TCCTCCGAGCAATGCTGGAT+CGG + chr4.2:28145994-28146013 MS.gene031528:CDS 55.0%
TCGCCAACCGAAGAAGGATC+AGG - chr4.2:28150430-28150449 None:intergenic 55.0%
TTTGAGTCCCCGCCAAGACA+AGG - chr4.2:28150382-28150401 None:intergenic 55.0%
!! TGCTCGGAGGAGCACTACTT+AGG - chr4.2:28145985-28146004 None:intergenic 55.0%
AGAGTCAGTAGCGCGGCCAT+TGG - chr4.2:28150521-28150540 None:intergenic 60.0%
AGTGCTCCTCCGAGCAATGC+TGG + chr4.2:28145989-28146008 MS.gene031528:CDS 60.0%
TCCGATCCAGCATTGCTCGG+AGG - chr4.2:28145998-28146017 None:intergenic 60.0%
!! GAGGGTACCTCTGAAGGGGT+TGG - chr4.2:28145727-28145746 None:intergenic 60.0%
!! GTGAATGGCGGGCACGATGT+TGG + chr4.2:28145959-28145978 MS.gene031528:CDS 60.0%
! CGGCCATTGGTCTGACGACG+AGG - chr4.2:28150508-28150527 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 28145673 28150558 28145673 ID=MS.gene031528
chr4.2 mRNA 28145673 28150558 28145673 ID=MS.gene031528.t1;Parent=MS.gene031528
chr4.2 exon 28145673 28145738 28145673 ID=MS.gene031528.t1.exon1;Parent=MS.gene031528.t1
chr4.2 CDS 28145673 28145738 28145673 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28145872 28146102 28145872 ID=MS.gene031528.t1.exon2;Parent=MS.gene031528.t1
chr4.2 CDS 28145872 28146102 28145872 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28146543 28146687 28146543 ID=MS.gene031528.t1.exon3;Parent=MS.gene031528.t1
chr4.2 CDS 28146543 28146687 28146543 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28146792 28146901 28146792 ID=MS.gene031528.t1.exon4;Parent=MS.gene031528.t1
chr4.2 CDS 28146792 28146901 28146792 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28147007 28147126 28147007 ID=MS.gene031528.t1.exon5;Parent=MS.gene031528.t1
chr4.2 CDS 28147007 28147126 28147007 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28147243 28147425 28147243 ID=MS.gene031528.t1.exon6;Parent=MS.gene031528.t1
chr4.2 CDS 28147243 28147425 28147243 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28147712 28147921 28147712 ID=MS.gene031528.t1.exon7;Parent=MS.gene031528.t1
chr4.2 CDS 28147712 28147921 28147712 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28148006 28148080 28148006 ID=MS.gene031528.t1.exon8;Parent=MS.gene031528.t1
chr4.2 CDS 28148006 28148080 28148006 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28148240 28148386 28148240 ID=MS.gene031528.t1.exon9;Parent=MS.gene031528.t1
chr4.2 CDS 28148240 28148386 28148240 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28148464 28148602 28148464 ID=MS.gene031528.t1.exon10;Parent=MS.gene031528.t1
chr4.2 CDS 28148464 28148602 28148464 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28148717 28148826 28148717 ID=MS.gene031528.t1.exon11;Parent=MS.gene031528.t1
chr4.2 CDS 28148717 28148826 28148717 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28149024 28149185 28149024 ID=MS.gene031528.t1.exon12;Parent=MS.gene031528.t1
chr4.2 CDS 28149024 28149185 28149024 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28149289 28149506 28149289 ID=MS.gene031528.t1.exon13;Parent=MS.gene031528.t1
chr4.2 CDS 28149289 28149506 28149289 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28149748 28149829 28149748 ID=MS.gene031528.t1.exon14;Parent=MS.gene031528.t1
chr4.2 CDS 28149748 28149829 28149748 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28149956 28150060 28149956 ID=MS.gene031528.t1.exon15;Parent=MS.gene031528.t1
chr4.2 CDS 28149956 28150060 28149956 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28150151 28150255 28150151 ID=MS.gene031528.t1.exon16;Parent=MS.gene031528.t1
chr4.2 CDS 28150151 28150255 28150151 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
chr4.2 exon 28150379 28150558 28150379 ID=MS.gene031528.t1.exon17;Parent=MS.gene031528.t1
chr4.2 CDS 28150379 28150558 28150379 ID=cds.MS.gene031528.t1;Parent=MS.gene031528.t1
Gene Sequence

>MS.gene031528

ATGGTTACCAAAATTCAAAACCGGCCTCCATTATCACTCACACACACATCTCCAACCCCTTCAGAGGTACCCTCTTTTCTCATTTCAAAATATTTGATATCTATATTCACCTCATTTTAAATTCTGGGATGTTCTTGTTCCTCTGTTTCATTGCAGTATCATTTTTAGATGTGATCATTGTATTCTTTTTTTATTGAAGTTTCAGAATTTTGTGGGAGATAAGCACCTGCTAGAAACAATGGTGGAGACTCCGATTAATGGAAGAATAAGGCAAGCTTTAACAGTTGTGAATGGCGGGCACGATGTTGGCCTAAGTAGTGCTCCTCCGAGCAATGCTGGATCGGATTATGGTGTAATAGAGTTTACAAGAGAAGATGTAGAAGCATTGCTAAATGAAAAAGCCAAAAAGAAAGAAAGGTTTAATTATAAGGTCCGTTCAAGTTTGAAATTTTGTTGTCGATAAGTTGTATTATGTTATATAGATAGATATATTTGAATTTAAAATTAAAGGATATAATATCAAGTTCAATGTATATGGTTGATAGCTTTGTGCGTTATTTGCTCATAGTTTACTCATAAGTGGACATGTAGTATTCTTGTAAACTGGACCGTAGTATTTAAACACAAGTTATAACCTTAAGTTTGAATAAAGAAAGTTATTGCAGAATTGACTGAATTCTGTGATCAAATCTTGTGTTCACTGTTTGCGTTTTTCGTATATATTTACTTTTTAACCAGGGTTGCTGTTCTAACAGATTTACATGATGCATAGTATTATTTTACCTACTGCTTGATTACTCAGATCATATGAACAATTTAATGTCGCCTTTGAATAAGAAAAACGATATAATGTAACTCTATGTTTTTTAGGAAAGATGTGAAAATATGGTGGATTATATAAAAAGGCTTAAGGTTTGTATCAGATGGTTCCAAGACCTTGAGACGAGCTACTCAATAGATCAGGAAAAGTTAAAGAATTCACTGGAAATGACCAAGCAAAAAAGTATAGAAATCGGTAAGATAATTTACCGATTTACTTCACTTCGGACCGTGATGAATGCTATTGCTTGCTGATTTTTATTACCAATATGTCTAGATTTATTTATTTATTTATTACAGAGATGCTGCTCAAAATCAAGGAAGAGGAGTTGAATTTAATTATTATAGAAATGAGAAAGAATTGCACTTCTTTACAAGAGAAATTGATAAAGGAAGAAGCAGAGAAGTCGGTAAGAAAGATTTTGAAGTCTTTTGCCTTTTAAATTTTGGAAAAAAATAATATGAAAGGAAATGCCAATCATAATAAGCTTTGAAAATATCTTTGTAAATACAAGGCTGCAGTGGAATCTCTTTCTAAAGAGAGAGAAGCAAGGCTTGATATTGAGAGGTCACATACTACTCTTTCCGAGGACCTCGGAAAAGCTGAACGAGAGATTCAAAGTGCAAATCAGAAGGTAAAATAACAATATAATTCTAGTTCAATGAATTCCTTTCCACTTTTTTTCTTCTTCCAATCATTGCAGGAATTAAACTAATATTAATTATTGTCTTCATTGATGGATTTCTGCAGATATCCTCGCTCAATGAAATGTATAAGCGGTTACAAGAATACATAACAAGTTTACAACAGTACAATGGAAAACTTCATACTGAGCTTTCATCAGTTGAAGATGAACTCAAACGTGTAGAGAAAGAAAAGGCTACTGCAGAGGAGAACATCGCCATGCTAAAGGGTCAACTTACTTTATCCATTGTAAGTTCTGCTTTCACATGTGATTCTTTTCAATTGGAATTCAAGTTAGAATAGGCTAAGATTTACTCATTCTTTATCTTCTTCTGGGATGTTTAGACGAAGATAATGTAGACTACGTTGAATATGATATACTTTGAAGATGATTCAAATTGTATATAATATTTTGCTCAACACAATTTCTTGTGACCTAAGTTATTGAACTTAATTGATTGTTCTGTTTGTTCTATCTTTCATTTCGTATTCATGCAACCGGTATATTATTCAATTTCCTTGGTTCTTTTAATAGTCTTCTCAAGAAGAGGCCACAAAGCAGAAGGATGATCTTGCTAGTGAAGTTTATTCTATGAGAGGAGAGTTGAAACAAGTAAGAGATGATAGAGACCGTCAATTATCTCAAGCGCAAAGTTTAAATGCTGAGTTCATGAAACTAAAAGAATCTAGGGAGAACTCTTGCATTGAATTGGACAGCTTGACATTAAAAGCAAATGAACTGGAGGTTGGTTTCTATACCTGATTTCCTTCTATTAAATATCACACTATTTTATTATTAGAGTCATGACAGGACGAGTTTCTTTCGCAGGAAAAAAGTTCATTGAAAGAGAATCAAATAAAGGCATTGCAAGAAAAGTTAGCAGCCGCAGAGAAGAAATTGCAGGTAATAACAACATTCTTTTGACAAAATTGTTGCGTGCTATTGGATATAAAAACCACTTGTGTTTTTTGTAAGATATAGAACCATAACAGCTTAGGATAGTTATTCAACGTAACCATTATTATCATTATCATGTTGTTAATTGCATATGTTTCTTGTTAGGTGACTGATGTATCTGTATTCGAGACAAGGACAGAATTTGAAGGGCAACAAAAACTTGTTGACGAGTTGCAAAAACGCTTAGAAGATTCAGAATATAAACTTATAGAAGGGGAGAGGCTGCGGAAAAAATTACACAATACCATTTTGGTAATTCATTGAACCGAAAGATTTGTTGATTATAAGAAAAAATCAGACACCTTATTAAACAATCTCAGTTTTAACAGGAGTTAAAAGGGAACATCCGTGTATTCTGTCGCGTGAGGCCTTTGTTGCCAGATGAAAGTCGTGGCACAGAAGGCAAGATATTCAGTTATCCATTATCAATGGAAACTTCTGGACGAGGAATTGACCTAGCCCAAAATGGTATATCTCTTGTGATGATGTATTTGAAAGTATAATTTTTCTTATTTTTCTATGATTGTTTTAGTTATGATCTTATTAAATTGGCAACTCGTGTGACTCCTATTTTGTTTTTAGGCCAGAAGCATTCTTTTAAATTTGATAAAGTTTTTATACAAGACGTATCACAAGAAGAAGTGTTTGTAGAAGTTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTAATTCAAAGCTCTTCTATTGTAAGCTTTATATCATTTTTCACATTTTTCCTTGGATTTCTTTGGTTCTGATCTATCAATGCTACATATAAGGCACGTCTTGGTTATGCTGCTATTCAAATATGCATGTAAATCAATATAGACACATACACATCAACCATTTGGATTTATTCTGAAATATGATGTTTTCATTTTAGGTTTGCATCTTTGCCTATGGTCAAACAGGATCAGGGAAAACCTATACAATGATGGGAAGACCTGGACATCCTGATGAAAAAGGGTTGATACCTCGTTCGTTAGAACAAATATTTCAAGCAAAACAGTCTCAACAACCTCAAGGCTGGAAATACGAAATGCAGGTAACATTGGAGTACTTTCTTCTTAGCTTACCTCATTATTGCATTGTAATGTAAACAATTTTTTGAACATGATCCGAGATGGTTCTTGTTATAAAATTTTCAGGTGTCAATGTTGGAAATATACAACGAAACCATTCGCGATTTATTATCTACAAACAGATCATCATCGGATGTATCACGCGTGGAAAATGGTACTCCTGGAAAGCAATACACAATCAAACATGACGTAAATGGAAATACACATGTTTCTGATCTTACAGTAGTGGATGTACACAGTGCGAAAGAAGTCGCGTTTCTTTTAAATCAAGCTGCAAATAGCAGGTAACTATTGTTAAGACACTGCAAAATGCAAATGAACTTGCCATTTTATAACTAGAATTCGATAGCTACATTTTTAAGAGATATATCTTTATTAGATTAAAATGGACAAACTGGTCTAGTAAAACATAATTTGATATGATTTTGGTGCAACAAAATGTTGGCTTTCTCATCAAAATTACAAAACTTTAGCATTTTTATGTAGAATTTAATTGTATTGATTATTCTGGTTTTTGCCTCTTAGATCTGTGGGAAAAACTCAGATGAATGAACAATCGTCAAGAAGTCATTTCGTGTTCACTCTTCGAATATATGGTGTAAATGAGGTATTCATGTTTCTCTTAAGATAATAGTCAAAACTGCATTTTATATCTATTCTACATTCCCCTCAATCTTCCATAATCATAACAATGGCATGCATCATAATTCAACCTAATTTATTTCTCTGCCAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTAATTGACCTTGCTGGTAGCGAGCGTCTTTCAAAGAGTGGTTCAACCGGTGACCGGTTGAGAGAAACTCAGGTATGTAAAGCCACAGTGTTTTTTTTTTTTTTCCATCTGTGCTTATTTTATTTCAAAATAGTTTTAACTTCATTTATCATTTGTAATCAGGCAATTAACAAAAGCTTGTCATCATTGAGTGATGTCATATTTGCCTTGGCCAAGAAGGAAGATCATGTGCCATTCAGGAACTCAAAGCTTACATATCTTCTTCAAGTAATTATCATTCTCTCACATGGCATTTCTTAAACTTTACACTACATTGATGATTATTTCTTTGTCATTGGCTTGAATCATTGAACATGATCTAACGTCGTGAATATAATGATGATTAAACAGCCTTGTCTTGGCGGGGACTCAAAGACGTTAATGTTTGTAAACATATCACCTGATCCTTCTTCGGTTGGCGAGTCACTATGCTCACTCCGGTTTGCTTCTAGAGTAAATGCTTGTGAGATTGGAACACCTCGTCGTCAGACCAATGGCCGCGCTACTGACTCTCGTTTGAGCTATTTCTGA
Protein sequence

>MS.gene031528.t1

MVTKIQNRPPLSLTHTSPTPSEFQNFVGDKHLLETMVETPINGRIRQALTVVNGGHDVGLSSAPPSNAGSDYGVIEFTREDVEALLNEKAKKKERFNYKERCENMVDYIKRLKVCIRWFQDLETSYSIDQEKLKNSLEMTKQKSIEIEMLLKIKEEELNLIIIEMRKNCTSLQEKLIKEEAEKSAAVESLSKEREARLDIERSHTTLSEDLGKAEREIQSANQKISSLNEMYKRLQEYITSLQQYNGKLHTELSSVEDELKRVEKEKATAEENIAMLKGQLTLSISSQEEATKQKDDLASEVYSMRGELKQVRDDRDRQLSQAQSLNAEFMKLKESRENSCIELDSLTLKANELEEKSSLKENQIKALQEKLAAAEKKLQVTDVSVFETRTEFEGQQKLVDELQKRLEDSEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESRGTEGKIFSYPLSMETSGRGIDLAQNGQKHSFKFDKVFIQDVSQEEVFVEVSQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPDEKGLIPRSLEQIFQAKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNRSSSDVSRVENGTPGKQYTIKHDVNGNTHVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLRETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRATDSRLSYF