AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27947

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27947.t1 MTR_8g088930 96.997 766 23 0 1 766 1 766 0.0 1544
MS.gene27947.t1 MTR_8g088930 96.871 767 23 1 1 766 1 767 0.0 1540
MS.gene27947.t1 MTR_8g088930 96.880 673 21 0 1 673 1 673 0.0 1358
MS.gene27947.t1 MTR_8g088930 96.736 674 21 1 1 673 1 674 0.0 1354
MS.gene27947.t1 MTR_1g062740 50.769 780 355 6 6 763 44 816 0.0 765
MS.gene27947.t1 MTR_1g050740 39.069 773 395 14 9 759 57 775 0.0 543
MS.gene27947.t1 MTR_1g050740 37.815 119 74 0 76 194 55 173 4.49e-18 89.4
MS.gene27947.t1 MTR_3g073100 38.846 780 367 19 1 764 45 730 2.52e-171 511
MS.gene27947.t1 MTR_7g089950 39.272 769 398 16 8 757 66 784 9.47e-170 509
MS.gene27947.t1 MTR_8g039100 38.896 779 390 16 2 764 41 749 4.27e-169 506
MS.gene27947.t1 MTR_3g097260 37.604 718 367 15 59 764 55 703 2.13e-137 422
MS.gene27947.t1 MTR_3g097260 43.500 200 113 0 9 208 51 250 8.45e-44 169
MS.gene27947.t1 MTR_3g097260 41.176 85 50 0 7 91 141 225 3.57e-13 73.6
MS.gene27947.t1 MTR_5g459450 46.651 433 181 9 341 759 331 727 1.27e-119 378
MS.gene27947.t1 MTR_5g459450 46.429 168 90 0 9 176 65 232 9.49e-48 181
MS.gene27947.t1 MTR_5g459450 35.135 148 94 1 47 194 59 204 8.77e-22 101
MS.gene27947.t1 MTR_8g095170 44.118 442 190 8 327 764 277 665 2.79e-116 366
MS.gene27947.t1 MTR_8g095170 44.970 169 92 1 6 173 23 191 5.86e-43 166
MS.gene27947.t1 MTR_8g095170 38.519 135 82 1 59 192 30 164 2.55e-19 93.2
MS.gene27947.t1 MTR_3g014650 45.047 424 187 8 341 757 382 766 5.73e-110 352
MS.gene27947.t1 MTR_3g014650 45.685 197 95 1 9 205 85 269 5.04e-52 194
MS.gene27947.t1 MTR_8g095170 53.357 283 128 3 327 607 277 557 2.13e-96 311
MS.gene27947.t1 MTR_8g095170 44.970 169 92 1 6 173 23 191 7.16e-43 164
MS.gene27947.t1 MTR_8g095170 38.519 135 82 1 59 192 30 164 4.88e-19 92.0
MS.gene27947.t1 MTR_8g080860 54.167 192 88 0 1 192 8 199 1.19e-62 212
MS.gene27947.t1 MTR_8g080860 40.252 159 95 0 12 170 111 269 4.72e-30 120
MS.gene27947.t1 MTR_8g080860 54.167 192 88 0 1 192 4 195 1.96e-62 211
MS.gene27947.t1 MTR_8g080860 40.252 159 95 0 12 170 107 265 7.65e-30 120
MS.gene27947.t1 MTR_4g107460 53.723 188 86 1 7 193 3 190 2.42e-56 196
MS.gene27947.t1 MTR_4g107460 37.931 145 90 0 15 159 104 248 6.78e-21 95.1
MS.gene27947.t1 MTR_8g095240 34.532 417 174 5 12 334 3 414 6.72e-56 198
MS.gene27947.t1 MTR_8g080350 41.887 265 110 5 12 236 125 385 1.76e-51 185
MS.gene27947.t1 MTR_8g092090 46.774 186 84 1 7 192 3 173 4.77e-43 156
MS.gene27947.t1 MTR_8g092090 36.913 149 94 0 11 159 84 232 9.20e-22 95.5
MS.gene27947.t1 MTR_8g092090 39.259 135 51 1 98 201 2 136 2.35e-16 79.7
MS.gene27947.t1 MTR_6g043150 45.078 193 105 1 6 197 3 195 1.14e-41 155
MS.gene27947.t1 MTR_6g043150 45.455 187 101 1 13 198 79 265 1.63e-38 146
MS.gene27947.t1 MTR_6g043150 43.575 179 101 0 13 191 148 326 7.15e-33 130
MS.gene27947.t1 MTR_8g080340 45.294 170 69 2 1 170 8 153 5.90e-40 145
MS.gene27947.t1 MTR_8g080340 52.252 111 52 1 82 192 20 129 1.40e-28 112
MS.gene27947.t1 MTR_8g092410 33.598 378 166 13 13 337 28 373 1.15e-38 148
MS.gene27947.t1 MTR_5g010840 39.640 222 96 2 14 197 113 334 1.06e-37 145
MS.gene27947.t1 MTR_5g010840 41.304 184 93 1 13 181 181 364 1.16e-34 137
MS.gene27947.t1 MTR_5g010840 32.414 145 89 2 56 199 109 245 3.05e-14 75.9
MS.gene27947.t1 MTR_5g010840 35.484 124 57 1 12 112 241 364 5.29e-12 68.9
MS.gene27947.t1 MTR_2g078470 43.085 188 106 1 13 199 79 266 2.67e-37 144
MS.gene27947.t1 MTR_2g078470 39.167 240 99 2 6 198 3 242 4.16e-36 140
MS.gene27947.t1 MTR_2g078470 40.957 188 110 1 13 199 148 335 1.58e-34 136
MS.gene27947.t1 MTR_2g078470 46.575 146 78 0 11 156 215 360 5.24e-34 134
MS.gene27947.t1 MTR_2g078470 59.551 89 36 0 13 101 286 374 3.00e-25 108
MS.gene27947.t1 MTR_8g080310 45.455 143 78 0 50 192 1 143 2.84e-31 120
MS.gene27947.t1 MTR_8g080310 39.869 153 92 0 8 160 5 157 7.14e-28 110
MS.gene27947.t1 MTR_7g451440 36.170 188 117 1 12 196 191 378 1.02e-30 126
MS.gene27947.t1 MTR_7g451440 34.266 143 91 1 4 143 226 368 6.41e-19 90.9
MS.gene27947.t1 MTR_7g451440 41.304 92 54 0 102 193 189 280 2.36e-14 76.6
MS.gene27947.t1 MTR_7g451440 25.000 228 146 3 51 253 184 411 5.13e-14 75.5
MS.gene27947.t1 MTR_4g099180 35.955 178 114 0 12 189 171 348 9.44e-29 120
MS.gene27947.t1 MTR_4g099180 35.036 137 89 0 7 143 212 348 1.08e-18 89.7
MS.gene27947.t1 MTR_4g099180 39.474 114 69 0 82 195 172 285 4.86e-14 75.5
MS.gene27947.t1 MTR_3g072650 34.857 175 114 0 12 186 184 358 1.01e-28 120
MS.gene27947.t1 MTR_3g072650 35.965 114 73 0 82 195 185 298 1.81e-12 70.5
MS.gene27947.t1 MTR_3g072650 39.785 93 56 0 100 192 180 272 4.70e-12 69.3
MS.gene27947.t1 MTR_3g072650 34.857 175 114 0 12 186 184 358 1.23e-28 119
MS.gene27947.t1 MTR_3g072650 35.965 114 73 0 82 195 185 298 2.35e-12 70.1
MS.gene27947.t1 MTR_3g072650 39.785 93 56 0 100 192 180 272 5.72e-12 68.9
MS.gene27947.t1 MTR_5g058920 36.313 179 114 0 8 186 192 370 6.37e-28 118
MS.gene27947.t1 MTR_5g058920 36.090 133 85 0 10 142 240 372 1.31e-16 83.6
MS.gene27947.t1 MTR_5g058920 37.719 114 71 0 82 195 197 310 1.64e-12 70.9
MS.gene27947.t1 MTR_8g007500 33.146 178 119 0 12 189 196 373 8.49e-25 108
MS.gene27947.t1 MTR_8g007500 34.307 137 90 0 7 143 237 373 3.76e-18 88.6
MS.gene27947.t1 MTR_8g007500 43.478 92 52 0 102 193 194 285 1.09e-14 77.8
MS.gene27947.t1 MTR_3g023310 41.353 133 65 1 24 156 7 126 1.27e-22 96.3
MS.gene27947.t1 MTR_3g023310 41.463 123 59 2 70 192 7 116 2.91e-18 83.6
MS.gene27947.t1 MTR_3g005910 55.556 72 32 0 455 526 1 72 8.93e-21 87.0
MS.gene27947.t1 MTR_4g099180 36.842 114 72 0 12 125 171 284 1.57e-15 78.6
MS.gene27947.t1 MTR_4g099180 39.474 114 69 0 82 195 172 285 1.14e-14 76.3
MS.gene27947.t1 MTR_3g023315 76.744 43 10 0 17 59 12 54 2.10e-15 72.4
MS.gene27947.t1 MTR_4g099180 36.842 114 72 0 12 125 171 284 2.92e-15 78.2
MS.gene27947.t1 MTR_4g099180 39.474 114 69 0 82 195 172 285 2.02e-14 75.5
MS.gene27947.t1 MTR_4g124590 31.217 189 110 7 437 611 1550 1732 1.31e-14 79.0
MS.gene27947.t1 MTR_8g023080 30.688 189 111 7 437 611 1550 1732 2.12e-13 74.7
MS.gene27947.t1 MTR_8g023080 30.688 189 111 7 437 611 1558 1740 2.31e-13 74.7
MS.gene27947.t1 MTR_1g112280 29.134 127 90 0 61 187 615 741 8.95e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27947.t1 AT1G10900 64.032 759 263 5 6 764 4 752 0.0 987
MS.gene27947.t1 AT1G10900 64.032 759 263 5 6 764 4 752 0.0 987
MS.gene27947.t1 AT1G10900 64.032 759 263 5 6 764 4 752 0.0 987
MS.gene27947.t1 AT1G60890 61.935 775 268 7 6 764 4 767 0.0 971
MS.gene27947.t1 AT1G60890 62.047 772 266 7 9 764 19 779 0.0 970
MS.gene27947.t1 AT3G09920 49.871 774 365 12 6 764 46 811 0.0 739
MS.gene27947.t1 AT3G09920 49.871 774 365 12 6 764 46 811 0.0 739
MS.gene27947.t1 AT3G09920 49.871 774 365 12 6 764 46 811 0.0 739
MS.gene27947.t1 AT3G09920 49.871 774 365 12 6 764 46 811 0.0 739
MS.gene27947.t1 AT2G41210 40.808 767 372 15 9 759 66 766 0.0 558
MS.gene27947.t1 AT3G07960 40.051 779 356 14 9 764 23 713 0.0 556
MS.gene27947.t1 AT3G07960 36.975 119 75 0 76 194 21 139 4.58e-19 92.4
MS.gene27947.t1 AT3G56960 40.078 771 386 17 9 764 68 777 0.0 548
MS.gene27947.t1 AT3G56960 40.078 771 386 17 9 764 68 777 0.0 548
MS.gene27947.t1 AT1G77740 39.608 765 359 18 9 759 73 748 1.68e-168 504
MS.gene27947.t1 AT1G77740 39.608 765 359 18 9 759 73 748 1.68e-168 504
MS.gene27947.t1 AT3G07960 42.691 602 283 8 9 591 23 581 3.00e-164 489
MS.gene27947.t1 AT3G07960 36.975 119 75 0 76 194 21 139 7.65e-19 91.7
MS.gene27947.t1 AT3G07960 42.691 602 283 8 9 591 23 581 6.61e-164 487
MS.gene27947.t1 AT3G07960 36.975 119 75 0 76 194 21 139 1.01e-18 91.3
MS.gene27947.t1 AT3G07960 42.691 602 283 8 9 591 23 581 6.61e-164 487
MS.gene27947.t1 AT3G07960 36.975 119 75 0 76 194 21 139 1.01e-18 91.3
MS.gene27947.t1 AT1G21980 37.344 723 389 16 59 764 76 751 3.44e-149 454
MS.gene27947.t1 AT1G21980 48.023 177 92 0 9 185 72 248 4.50e-53 197
MS.gene27947.t1 AT2G26420 36.340 765 379 16 6 759 46 713 2.48e-146 446
MS.gene27947.t1 AT2G26420 36.340 765 379 16 6 759 46 713 2.48e-146 446
MS.gene27947.t1 AT2G26420 36.376 756 377 15 6 759 46 699 8.76e-143 436
MS.gene27947.t1 AT1G01460 34.180 433 239 10 365 764 3 422 1.88e-74 248
MS.gene27947.t1 AT4G01190 34.063 411 245 9 363 763 8 402 1.67e-69 234
MS.gene27947.t1 AT4G01190 34.063 411 245 9 363 763 8 402 1.67e-69 234
MS.gene27947.t1 AT4G01190 34.596 396 236 8 378 763 10 392 2.04e-69 234
MS.gene27947.t1 AT4G17080 34.270 178 117 0 10 187 254 431 5.17e-28 119
MS.gene27947.t1 AT4G17080 35.625 160 103 0 35 194 256 415 1.80e-22 102
MS.gene27947.t1 AT4G17080 32.836 134 90 0 10 143 300 433 5.33e-18 88.6
MS.gene27947.t1 AT4G17080 36.429 140 87 1 56 195 233 370 3.05e-15 79.7
MS.gene27947.t1 AT1G77660 35.429 175 113 0 12 186 177 351 1.02e-27 117
MS.gene27947.t1 AT1G77660 33.099 142 92 1 4 142 212 353 5.35e-16 81.6
MS.gene27947.t1 AT1G77660 35.088 114 74 0 82 195 178 291 2.54e-11 67.0
MS.gene27947.t1 AT2G35170 35.135 185 119 1 3 187 217 400 3.10e-27 116
MS.gene27947.t1 AT2G35170 26.667 225 156 2 56 276 201 420 7.84e-13 72.0
MS.gene27947.t1 AT1G21920 34.091 176 116 0 12 187 173 348 1.22e-26 114
MS.gene27947.t1 AT1G21920 32.824 131 88 0 10 140 217 347 8.33e-15 77.8
MS.gene27947.t1 AT1G21920 35.965 114 73 0 82 195 174 287 7.91e-12 68.6
MS.gene27947.t1 AT1G21920 34.091 176 116 0 12 187 173 348 2.22e-26 112
MS.gene27947.t1 AT1G21920 32.824 131 88 0 10 140 217 347 1.43e-14 76.6
MS.gene27947.t1 AT1G21920 35.965 114 73 0 82 195 174 287 1.03e-11 67.8
MS.gene27947.t1 AT1G34260 30.189 212 125 9 392 588 1180 1383 5.45e-17 86.7
MS.gene27947.t1 AT1G34260 30.189 212 125 9 392 588 1180 1383 5.45e-17 86.7
MS.gene27947.t1 AT1G34260 30.189 212 125 9 392 588 1180 1383 5.45e-17 86.7
MS.gene27947.t1 AT1G34260 30.189 212 125 9 392 588 940 1143 5.90e-17 86.3
MS.gene27947.t1 AT4G33240 31.390 223 130 9 380 588 1443 1656 2.72e-15 81.3
MS.gene27947.t1 AT4G33240 31.390 223 130 9 380 588 1444 1657 2.74e-15 81.3
MS.gene27947.t1 AT4G33240 31.390 223 130 9 380 588 1444 1657 2.74e-15 81.3
MS.gene27947.t1 AT4G33240 31.390 223 130 9 380 588 1444 1657 2.74e-15 81.3
MS.gene27947.t1 AT4G33240 31.390 223 130 9 380 588 1441 1654 2.76e-15 81.3
MS.gene27947.t1 AT4G33240 31.390 223 130 9 380 588 1404 1617 2.89e-15 80.9
MS.gene27947.t1 AT4G33240 31.390 223 130 9 380 588 1440 1653 2.91e-15 80.9
MS.gene27947.t1 AT1G71010 30.851 188 112 6 437 611 1414 1596 1.23e-13 75.9
MS.gene27947.t1 AT1G75010 30.709 127 88 0 61 187 604 730 2.26e-12 71.2
MS.gene27947.t1 AT1G75010 39.080 87 53 0 109 195 606 692 9.87e-11 65.9

Find 171 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATGTTTACGAAGGTTTA+TGG 0.157602 4.4:-12128781 MS.gene27947:CDS
CTACGGTTAAATCTTGAATT+TGG 0.182290 4.4:+12128443 None:intergenic
CCTACATGATGGTAGTATTT+AGG 0.206353 4.4:+12127256 None:intergenic
CATCAATTTCATGGATAAAA+AGG 0.210898 4.4:-12124983 MS.gene27947:CDS
TTCTCTAGACTGCAAGTTCT+TGG 0.217156 4.4:-12125801 MS.gene27947:CDS
TACAGACATCACGGTATTTC+CGG 0.243562 4.4:+12124955 None:intergenic
TTTGATGGTTGTTGGTTAAA+TGG 0.249491 4.4:-12128635 MS.gene27947:CDS
TTTGAGAGAAATGTTCAAAT+TGG 0.275332 4.4:-12127569 MS.gene27947:CDS
GAAGTTCGGTCGTCTGATTT+TGG 0.281272 4.4:-12127838 MS.gene27947:CDS
TCAGATGGAGGACTTTATAT+TGG 0.295938 4.4:-12128581 MS.gene27947:CDS
GAAGTATCTATATTGGAAAT+TGG 0.296465 4.4:-12128712 MS.gene27947:CDS
AACACTGAGAGGTGGGAAAA+AGG 0.313597 4.4:-12127185 MS.gene27947:intron
ACTCTTATTACAAAATTCTT+CGG 0.317002 4.4:-12127220 MS.gene27947:CDS
TGAACGTTTCATCAATTTCA+TGG 0.329150 4.4:-12124992 MS.gene27947:CDS
GTAAAGAAGAGTTCAATTAT+AGG 0.329256 4.4:-12128119 MS.gene27947:CDS
TATGAAGGGGATTGGATAGA+TGG 0.337976 4.4:-12128980 MS.gene27947:CDS
CTCTTATTACAAAATTCTTC+GGG 0.342573 4.4:-12127219 MS.gene27947:CDS
ATCTCAAAGTACTTCATTGT+TGG 0.345418 4.4:-12128369 MS.gene27947:CDS
ATTATTGCCCTATGGTCTTC+AGG 0.349462 4.4:-12127729 MS.gene27947:intron
AATGATGGAAGTATCTATAT+TGG 0.350708 4.4:-12128719 MS.gene27947:CDS
CTCAGATTGCCGGTGCAATT+AGG 0.361997 4.4:-12125228 MS.gene27947:intron
AAAGGAACATTCTATCCTTC+TGG 0.363846 4.4:-12128530 MS.gene27947:CDS
CTCAGATTGACCTTCATTAG+AGG 0.364250 4.4:+12128274 None:intergenic
GGTATCTGGTATGAGTAATA+TGG 0.375485 4.4:-12128252 MS.gene27947:CDS
AAGTACGAGGGCGAATTCTC+CGG 0.383441 4.4:-12128914 MS.gene27947:CDS
ATCGCATAATAAGAACAAAA+AGG 0.391301 4.4:-12128165 MS.gene27947:CDS
ATTCTCATTGCTATGAAGAT+TGG 0.396427 4.4:+12128475 None:intergenic
ACCTTCGTAAACATCTGAAT+TGG 0.404965 4.4:+12128787 None:intergenic
CCCTCGTACTTTGCTCCTGA+TGG 0.405502 4.4:+12128926 None:intergenic
TTGGAGAAAGAGCTAGGATA+AGG 0.407652 4.4:-12127819 MS.gene27947:CDS
ACGAACGCCTTTAGATTCTC+TGG 0.408227 4.4:+12125725 None:intergenic
GAAGGTCAATCTGAGGTATC+TGG 0.410812 4.4:-12128266 MS.gene27947:CDS
CAGGGAAAGGGATACTTATA+TGG 0.412305 4.4:-12128949 MS.gene27947:CDS
ACAGACATCACGGTATTTCC+GGG 0.414756 4.4:+12124956 None:intergenic
GGGAATAATAGATATACTTC+AGG 0.414956 4.4:-12125106 MS.gene27947:CDS
ACGCCTGGACCTCACATTAG+AGG 0.416249 4.4:-12125442 MS.gene27947:CDS
CGGTTCCTGCACGCGAAGTT+CGG 0.417255 4.4:-12127852 MS.gene27947:CDS
AGCTTCGTCAACGCGACGCC+TGG 0.420191 4.4:-12125457 MS.gene27947:CDS
TCTAAAATACGAATTTCATA+TGG 0.420253 4.4:-12126946 MS.gene27947:CDS
AACAACCATCTCTAAAGAAA+TGG 0.425820 4.4:-12128502 MS.gene27947:CDS
ATGAATGTTCCTCAGATTGC+CGG 0.428484 4.4:-12125238 MS.gene27947:intron
TTAATTTGCAGCTTGGCATC+AGG 0.428757 4.4:-12128061 MS.gene27947:intron
GGGATTATGAAGTGGTTTAA+CGG 0.429532 4.4:-12128665 MS.gene27947:CDS
TTAGGTGCGGTTTGTTGTCA+TGG 0.434098 4.4:-12127087 MS.gene27947:intron
GATCGGTATATGAAGGGGAT+TGG 0.434561 4.4:-12128988 MS.gene27947:CDS
TACGAAGGTTTATGGAAAGA+AGG 0.438135 4.4:-12128773 MS.gene27947:CDS
GAAGAGAAGTCCTTTACAAA+TGG 0.438715 4.4:-12129079 MS.gene27947:CDS
AATTGATTACAGTCTTCTGT+TGG 0.443015 4.4:-12125765 MS.gene27947:CDS
GTATACTTCCCCACGGCAAC+GGG 0.447403 4.4:-12129030 MS.gene27947:CDS
ACTGTTCTGTAGACTTCTAC+TGG 0.449316 4.4:-12127756 MS.gene27947:CDS
GGAAAATTTACTTGGAATGA+TGG 0.451266 4.4:-12128734 MS.gene27947:CDS
ATGAATGCTCATCACGGGAT+TGG 0.454271 4.4:-12128824 MS.gene27947:CDS
CGACATATGCAATCGTCAGC+AGG 0.456001 4.4:+12128323 None:intergenic
CGAACTTCGCGTGCAGGAAC+CGG 0.457813 4.4:+12127853 None:intergenic
GATAATAGCTTCGGCGGTGT+TGG 0.458656 4.4:+12128090 None:intergenic
AAGGCGTTCGTCGAACCTCC+TGG 0.464255 4.4:-12125713 MS.gene27947:CDS
ATCAAACTGCAGTGATTTGT+AGG 0.464399 4.4:+12125053 None:intergenic
GCAACTAACAACAAGCCTTT+CGG 0.464606 4.4:+12125490 None:intergenic
AAGGCAGCGGAAAATTTACT+TGG 0.465244 4.4:-12128742 MS.gene27947:CDS
CTGAAGCTTAATTTGCAGCT+TGG 0.465574 4.4:-12128068 MS.gene27947:CDS
ATTGATTACAGTCTTCTGTT+GGG 0.467533 4.4:-12125764 MS.gene27947:CDS
GGGATACTTATATGGCCATC+AGG 0.475813 4.4:-12128941 MS.gene27947:CDS
AGTACGAGGGCGAATTCTCC+GGG 0.479858 4.4:-12128913 MS.gene27947:CDS
TAAGCTTCAGATAATAGCTT+CGG 0.480311 4.4:+12128081 None:intergenic
TAGAGCACAATCACCACAAA+TGG 0.481172 4.4:+12127525 None:intergenic
AAATACTCACCTTGCAGTAC+CGG 0.481918 4.4:+12125366 None:intergenic
TGTCTACATTGGTAAATTCA+AGG 0.485501 4.4:-12129053 MS.gene27947:CDS
TCTGTTACTGATATAGTCAT+AGG 0.486890 4.4:+12125030 None:intergenic
TCATAGCAATGAGAATTGTA+AGG 0.491080 4.4:-12128468 MS.gene27947:CDS
CTGGAAAGATTATTGCCCTA+TGG 0.492808 4.4:-12127737 MS.gene27947:CDS
AATGGACTTAGACAAGGATC+TGG 0.498528 4.4:-12128617 MS.gene27947:CDS
CTAAAGGACATATCTTCAGC+TGG 0.501585 4.4:-12127505 MS.gene27947:CDS
CACCTCTCAGTGTTATTCGA+TGG 0.502502 4.4:+12127194 None:intergenic
TTTCATAACTTCCTACATGA+TGG 0.502637 4.4:+12127245 None:intergenic
TATATTGGAACATGGAGTAA+AGG 0.502815 4.4:-12128566 MS.gene27947:CDS
TTGTGGTGATTGTGCTCTAA+AGG 0.503067 4.4:-12127521 MS.gene27947:CDS
TATAGTTTACCTTCTGCAGA+TGG 0.505853 4.4:-12125674 MS.gene27947:intron
TAGGTGCGGTTTGTTGTCAT+GGG 0.512383 4.4:-12127086 MS.gene27947:CDS
GGGAATTATCTTCACGGTCA+CGG 0.512896 4.4:-12128893 MS.gene27947:CDS
TGTGTACTTCCCGTTGCCGT+GGG 0.513815 4.4:+12129021 None:intergenic
GAAGGAATTCGCGAAGGCAG+CGG 0.514143 4.4:-12128755 MS.gene27947:CDS
TTATGATGTGGTACTCTACA+TGG 0.514200 4.4:-12125127 MS.gene27947:CDS
GTACACCATTTCTTTAGAGA+TGG 0.515782 4.4:+12128497 None:intergenic
GGTCTGCGATAACGCGGATG+AGG 0.519666 4.4:+12128295 None:intergenic
CACTAGATTTACTCAAACAA+GGG 0.520368 4.4:-12125528 MS.gene27947:intron
GACGACCGAACTTCGCGTGC+AGG 0.520685 4.4:+12127847 None:intergenic
ATCAACTTCCTTGTTACCGA+TGG 0.520731 4.4:+12125399 None:intergenic
TTCCCTCTAATGTGAGGTCC+AGG 0.521447 4.4:+12125439 None:intergenic
ATGTGTACTTCCCGTTGCCG+TGG 0.523495 4.4:+12129020 None:intergenic
GATAAGGATGTACTTTCCTA+AGG 0.524503 4.4:-12127803 MS.gene27947:CDS
AAAGGCCTAAAGGACGGAAA+AGG 0.524731 4.4:-12128548 MS.gene27947:CDS
GGCGTCGCGTTGACGAAGCT+CGG 0.526121 4.4:+12125460 None:intergenic
GGTATACTTCCCCACGGCAA+CGG 0.526432 4.4:-12129031 MS.gene27947:CDS
GTCAATTGTGAACCCTCCTT+AGG 0.529080 4.4:+12127787 None:intergenic
TTCTCCGGGAATTATCTTCA+CGG 0.530694 4.4:-12128899 MS.gene27947:CDS
CGCCTGGACCTCACATTAGA+GGG 0.534333 4.4:-12125441 MS.gene27947:CDS
TACTGACGCTGTATTGCTCC+AGG 0.536520 4.4:+12125695 None:intergenic
AATGAATACCTGAAGACCAT+AGG 0.538150 4.4:+12127721 None:intergenic
TCAGATGGATCGGTATATGA+AGG 0.538278 4.4:-12128995 MS.gene27947:CDS
TAGAGCTCCAGAGAATCTAA+AGG 0.546858 4.4:-12125732 MS.gene27947:CDS
CCTAAATACTACCATCATGT+AGG 0.550012 4.4:-12127256 MS.gene27947:CDS
GTCTACATTGGTAAATTCAA+GGG 0.551103 4.4:-12129052 MS.gene27947:CDS
AAGGATGTACTTTCCTAAGG+AGG 0.552053 4.4:-12127800 MS.gene27947:CDS
CCATCGTCGTTACGATCTGA+AGG 0.555421 4.4:-12127036 MS.gene27947:CDS
TGGAGGATGAATGCTCATCA+CGG 0.558790 4.4:-12128830 MS.gene27947:CDS
GTAGACATCACCATTTGTAA+AGG 0.559629 4.4:+12129069 None:intergenic
GTGACCGTGAAGATAATTCC+CGG 0.561940 4.4:+12128895 None:intergenic
ATGTTTACTCCTAATTGCAC+CGG 0.562596 4.4:+12125219 None:intergenic
ACAAATGGTGATGTCTACAT+TGG 0.565018 4.4:-12129064 MS.gene27947:CDS
ATGAATACCTGAAGACCATA+GGG 0.565904 4.4:+12127722 None:intergenic
AGCATACTCCATCGGTAACA+AGG 0.571690 4.4:-12125407 MS.gene27947:CDS
GCACTAGATTTACTCAAACA+AGG 0.574901 4.4:-12125529 MS.gene27947:intron
GTACACATGGTCAGATGGAT+CGG 0.577176 4.4:-12129005 MS.gene27947:CDS
GATGGTTGTTTGCTACCAGA+AGG 0.578528 4.4:+12128515 None:intergenic
GGAGGATGAATGCTCATCAC+GGG 0.578586 4.4:-12128829 MS.gene27947:CDS
CAGATGGATCGGTATATGAA+GGG 0.578591 4.4:-12128994 MS.gene27947:CDS
TTATCGCAGACCTCTAATGA+AGG 0.580718 4.4:-12128284 MS.gene27947:CDS
AACATGGAGTAAAGGCCTAA+AGG 0.583252 4.4:-12128558 MS.gene27947:CDS
AACGGCTGTGTTTACACTGG+TGG 0.584384 4.4:-12128854 MS.gene27947:CDS
AAAAGGGAAAATAGATGGAA+GGG 0.584921 4.4:-12128687 MS.gene27947:CDS
CCTTCAGATCGTAACGACGA+TGG 0.585986 4.4:+12127036 None:intergenic
TTCGAAAGGGAATATATGCA+AGG 0.587505 4.4:-12128227 MS.gene27947:CDS
AATACTCACCTTGCAGTACC+GGG 0.588020 4.4:+12125367 None:intergenic
GATCTGAAGGGATCTTCTCA+AGG 0.588048 4.4:-12127023 MS.gene27947:CDS
TCCAATTCAGATGTTTACGA+AGG 0.595150 4.4:-12128788 MS.gene27947:CDS
AAAGGGAAAATAGATGGAAG+GGG 0.596052 4.4:-12128686 MS.gene27947:CDS
AGGATGTACTTTCCTAAGGA+GGG 0.596234 4.4:-12127799 MS.gene27947:CDS
GGGAAGTACACATGGTCAGA+TGG 0.596249 4.4:-12129010 MS.gene27947:CDS
ATCGAATAACACTGAGAGGT+GGG 0.596556 4.4:-12127192 MS.gene27947:CDS
AGCAAACTAGTAGCTTGAGC+CGG 0.603192 4.4:+12125195 None:intergenic
GAGTACATGATGTCCATTTG+TGG 0.605960 4.4:-12127538 MS.gene27947:CDS
ATTAGAGGTCTGCGATAACG+CGG 0.609836 4.4:+12128289 None:intergenic
TGGTTAAATGGACTTAGACA+AGG 0.611568 4.4:-12128623 MS.gene27947:CDS
GACATATGCAATCGTCAGCA+GGG 0.613342 4.4:+12128324 None:intergenic
ACAAATGGACATCATGTACT+CGG 0.617112 4.4:+12127540 None:intergenic
CATCGAATAACACTGAGAGG+TGG 0.622054 4.4:-12127193 MS.gene27947:CDS
TAGTTTGCTTCAAGAAGACA+AGG 0.625211 4.4:-12125181 MS.gene27947:CDS
ATATACTAACCATCTGCAGA+AGG 0.625385 4.4:+12125665 None:intergenic
CTGCTAGTCATGGAGGACAA+TGG 0.627968 4.4:-12129255 None:intergenic
TCAATTCTCAGGTACACTGT+AGG 0.629207 4.4:-12127886 MS.gene27947:intron
GCTTCAGATAATAGCTTCGG+CGG 0.629314 4.4:+12128084 None:intergenic
CTCTAATGAAGGTCAATCTG+AGG 0.630043 4.4:-12128273 MS.gene27947:CDS
TAGTCATGGAGGACAATGGA+AGG 0.633428 4.4:-12129251 None:intergenic
AAGGGAAAATAGATGGAAGG+GGG 0.634233 4.4:-12128685 MS.gene27947:CDS
TGGAGTAAAGGCCTAAAGGA+CGG 0.638246 4.4:-12128554 MS.gene27947:CDS
GTGTTTACACTGGTGGATGG+AGG 0.638524 4.4:-12128847 MS.gene27947:CDS
TGGAAAGAAGGAATTCGCGA+AGG 0.641463 4.4:-12128761 MS.gene27947:CDS
AATGTATTCCCTCTAATGTG+AGG 0.644444 4.4:+12125433 None:intergenic
AGATGGATCGGTATATGAAG+GGG 0.644736 4.4:-12128993 MS.gene27947:CDS
GAGGACTTTATATTGGAACA+TGG 0.648337 4.4:-12128574 MS.gene27947:CDS
GCCATCAGGAGCAAAGTACG+AGG 0.650915 4.4:-12128927 MS.gene27947:CDS
TATGATGTGGTACTCTACAT+GGG 0.652027 4.4:-12125126 MS.gene27947:CDS
GCAATTAGGAGTAAACATGC+CGG 0.652141 4.4:-12125214 MS.gene27947:CDS
ACTAGATTTACTCAAACAAG+GGG 0.654789 4.4:-12125527 MS.gene27947:intron
TATGCAAGGAGTTCTAATTG+TGG 0.655152 4.4:-12128213 MS.gene27947:CDS
AGAAATGTTCAAATTGGACG+CGG 0.655936 4.4:-12127563 MS.gene27947:CDS
GCTGTGTTTACACTGGTGGA+TGG 0.657960 4.4:-12128850 MS.gene27947:CDS
GAGCAGTTGATCATTCCGAA+AGG 0.659532 4.4:-12125505 MS.gene27947:CDS
ACATTGAGAGCATACTCCAT+CGG 0.662326 4.4:-12125415 MS.gene27947:CDS
TCGAACGGCTGTGTTTACAC+TGG 0.664113 4.4:-12128857 MS.gene27947:CDS
TTCAAGGGTATACTTCCCCA+CGG 0.668280 4.4:-12129037 MS.gene27947:CDS
ACGGCAACGGGAAGTACACA+TGG 0.669163 4.4:-12129018 MS.gene27947:CDS
ATCCATCGAATAACACTGAG+AGG 0.670109 4.4:-12127196 MS.gene27947:CDS
GGAACATTCACAAAATCGAA+CGG 0.670799 4.4:-12128872 MS.gene27947:CDS
CATCGTCGTTACGATCTGAA+GGG 0.676822 4.4:-12127035 MS.gene27947:CDS
TTTGCTTCAAGAAGACAAGG+TGG 0.679586 4.4:-12125178 MS.gene27947:CDS
GTGTACTTCCCGTTGCCGTG+GGG 0.689730 4.4:+12129022 None:intergenic
AAGTCTACAGAACAGTGTGG+AGG 0.692411 4.4:+12127763 None:intergenic
TAGAAGTCTACAGAACAGTG+TGG 0.705962 4.4:+12127760 None:intergenic
CCATCAGGAGCAAAGTACGA+GGG 0.707876 4.4:-12128926 MS.gene27947:CDS
TGACGCTGTATTGCTCCAGG+AGG 0.761183 4.4:+12125698 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTTAATTAAAAGTTAATA+TGG + chr4.4:12126835-12126854 None:intergenic 10.0%
!! AATAAAAATATTTGTTTCAT+TGG + chr4.4:12127630-12127649 None:intergenic 10.0%
!!! AATATCTTTTGTTTTATTTA+AGG + chr4.4:12127600-12127619 None:intergenic 10.0%
!!! CTATATTTTATATGTAATAA+TGG - chr4.4:12127663-12127682 MS.gene27947:intron 10.0%
!! AATAAAACAAAAGATATTAG+TGG - chr4.4:12127602-12127621 MS.gene27947:intron 15.0%
!! ATATAAGTGTAAAGAAATAT+TGG - chr4.4:12128077-12128096 MS.gene27947:CDS 15.0%
!! CACTTGAATATTTATTTATT+TGG - chr4.4:12126259-12126278 MS.gene27947:intron 15.0%
!!! AAAATCATCTGTTTAATTTT+CGG + chr4.4:12128052-12128071 None:intergenic 15.0%
!!! AGTAATACAATTTTACTTTT+TGG - chr4.4:12127499-12127518 MS.gene27947:CDS 15.0%
!!! ATATGATTTTATGATTATTG+TGG - chr4.4:12126544-12126563 MS.gene27947:intron 15.0%
!!! TATTGCTATTAATTTTATCT+TGG + chr4.4:12127224-12127243 None:intergenic 15.0%
!! AAAAGTTACTCTTATAAAGT+AGG + chr4.4:12127324-12127343 None:intergenic 20.0%
!! ACTAAAAAAATATGAGCTAA+AGG - chr4.4:12126781-12126800 MS.gene27947:intron 20.0%
!! ACTCTTATTACAAAATTCTT+CGG - chr4.4:12126989-12127008 MS.gene27947:CDS 20.0%
!! ATATTGGAAATTGGAAAAAA+GGG - chr4.4:12125506-12125525 MS.gene27947:CDS 20.0%
!! CATATCATATTCTAAATAAC+TGG + chr4.4:12128579-12128598 None:intergenic 20.0%
!! GATATCAATATATAATCACT+AGG + chr4.4:12128619-12128638 None:intergenic 20.0%
!! TACTAACATAATCATGAAAT+AGG + chr4.4:12127419-12127438 None:intergenic 20.0%
!! TATATTGGAAATTGGAAAAA+AGG - chr4.4:12125505-12125524 MS.gene27947:CDS 20.0%
!! TATCAGAATAACATGTATAT+AGG - chr4.4:12126510-12126529 MS.gene27947:intron 20.0%
!!! AGAAAACAACAAAGTATTTA+TGG + chr4.4:12127099-12127118 None:intergenic 20.0%
!!! ATACAATTTTACTTTTTGGA+CGG - chr4.4:12127503-12127522 MS.gene27947:CDS 20.0%
!!! TCTAAAATACGAATTTCATA+TGG - chr4.4:12127263-12127282 MS.gene27947:CDS 20.0%
! AATATATAATCACTAGGCTT+GGG + chr4.4:12128613-12128632 None:intergenic 25.0%
! AATTAAGTACTTAAGAAGTC+AGG + chr4.4:12126889-12126908 None:intergenic 25.0%
! ACTTCTTTCTTCTTGTTAAT+TGG - chr4.4:12127068-12127087 MS.gene27947:CDS 25.0%
! ATCGCATAATAAGAACAAAA+AGG - chr4.4:12126044-12126063 MS.gene27947:intron 25.0%
! ATGTGATTTCATATATTTCC+AGG - chr4.4:12126615-12126634 MS.gene27947:intron 25.0%
! CAAAACAAAAGAGAATGAAT+AGG + chr4.4:12125011-12125030 None:intergenic 25.0%
! CATCAATTTCATGGATAAAA+AGG - chr4.4:12129226-12129245 MS.gene27947:intron 25.0%
! CTCTTATTACAAAATTCTTC+GGG - chr4.4:12126990-12127009 MS.gene27947:CDS 25.0%
! GTAAAGAAGAGTTCAATTAT+AGG - chr4.4:12126090-12126109 MS.gene27947:intron 25.0%
! TTTGAGAGAAATGTTCAAAT+TGG - chr4.4:12126640-12126659 MS.gene27947:intron 25.0%
!! AAACGTTCAGCATAAATTTT+AGG + chr4.4:12129206-12129225 None:intergenic 25.0%
!! ACTATCAAAATCTGAAATTG+TGG + chr4.4:12128219-12128238 None:intergenic 25.0%
!! GAAGTATCTATATTGGAAAT+TGG - chr4.4:12125497-12125516 MS.gene27947:CDS 25.0%
!! TAACTGTTTCTTGTTAATGT+AGG - chr4.4:12125104-12125123 MS.gene27947:CDS 25.0%
!!! AATGATGGAAGTATCTATAT+TGG - chr4.4:12125490-12125509 MS.gene27947:CDS 25.0%
!!! ATTTTTTTTGCTCAATTCTC+AGG - chr4.4:12126312-12126331 MS.gene27947:intron 25.0%
!!! GTTAGTATTTTATTTCCCAT+AGG - chr4.4:12127432-12127451 MS.gene27947:CDS 25.0%
!!! TTTCAGATTTTGATAGTACT+TGG - chr4.4:12128222-12128241 MS.gene27947:CDS 25.0%
AAAAAGGGAAAATAGATGGA+AGG - chr4.4:12125521-12125540 MS.gene27947:CDS 30.0%
AAAAGGGAAAATAGATGGAA+GGG - chr4.4:12125522-12125541 MS.gene27947:CDS 30.0%
AAGAAGTAAAGACGGATATT+AGG + chr4.4:12127055-12127074 None:intergenic 30.0%
AATTGATTACAGTCTTCTGT+TGG - chr4.4:12128444-12128463 MS.gene27947:CDS 30.0%
ACTAGATTTACTCAAACAAG+GGG - chr4.4:12128682-12128701 MS.gene27947:CDS 30.0%
ATCTCTTATTGACAGTATCA+TGG - chr4.4:12128001-12128020 MS.gene27947:intron 30.0%
ATTCTCATTGCTATGAAGAT+TGG + chr4.4:12125737-12125756 None:intergenic 30.0%
ATTGATTACAGTCTTCTGTT+GGG - chr4.4:12128445-12128464 MS.gene27947:CDS 30.0%
ATTTGTGAGGGATATCAATA+AGG + chr4.4:12127766-12127785 None:intergenic 30.0%
CAAGAAGAAAGAAGTAAAGA+CGG + chr4.4:12127063-12127082 None:intergenic 30.0%
CAATATATAATCACTAGGCT+TGG + chr4.4:12128614-12128633 None:intergenic 30.0%
CACTAGATTTACTCAAACAA+GGG - chr4.4:12128681-12128700 MS.gene27947:CDS 30.0%
CTAATAATACTGGCACAATA+TGG - chr4.4:12127527-12127546 MS.gene27947:CDS 30.0%
CTACGGTTAAATCTTGAATT+TGG + chr4.4:12125769-12125788 None:intergenic 30.0%
GAACTTAAGATCACTAAACT+AGG - chr4.4:12128907-12128926 MS.gene27947:CDS 30.0%
GGAAAATTTACTTGGAATGA+TGG - chr4.4:12125475-12125494 MS.gene27947:CDS 30.0%
GGGAATAATAGATATACTTC+AGG - chr4.4:12129103-12129122 MS.gene27947:intron 30.0%
GTCTACATTGGTAAATTCAA+GGG - chr4.4:12125157-12125176 MS.gene27947:CDS 30.0%
TAAGCTTCAGATAATAGCTT+CGG + chr4.4:12126131-12126150 None:intergenic 30.0%
TATATTGGAACATGGAGTAA+AGG - chr4.4:12125643-12125662 MS.gene27947:intron 30.0%
TCATAGCAATGAGAATTGTA+AGG - chr4.4:12125741-12125760 MS.gene27947:CDS 30.0%
TCTCTCTATTTGTAAAGCTT+TGG + chr4.4:12127917-12127936 None:intergenic 30.0%
TCTGTTACTGATATAGTCAT+AGG + chr4.4:12129182-12129201 None:intergenic 30.0%
TGAACCAGAAAAATAAAGTC+AGG + chr4.4:12128381-12128400 None:intergenic 30.0%
TGAACGTTTCATCAATTTCA+TGG - chr4.4:12129217-12129236 MS.gene27947:intron 30.0%
TGGAAAAAAGGGAAAATAGA+TGG - chr4.4:12125517-12125536 MS.gene27947:CDS 30.0%
TGTCTACATTGGTAAATTCA+AGG - chr4.4:12125156-12125175 MS.gene27947:CDS 30.0%
TTTCATAACTTCCTACATGA+TGG + chr4.4:12126967-12126986 None:intergenic 30.0%
! AACAACCATCTCTAAAGAAA+TGG - chr4.4:12125707-12125726 MS.gene27947:CDS 30.0%
! AAGTAGTAAAGCATTTCCTA+TGG + chr4.4:12127451-12127470 None:intergenic 30.0%
! AGTAGTAAAGCATTTCCTAT+GGG + chr4.4:12127450-12127469 None:intergenic 30.0%
! ATCTCAAAGTACTTCATTGT+TGG - chr4.4:12125840-12125859 MS.gene27947:intron 30.0%
! CTTTGTTATCGTAAGTACTA+TGG - chr4.4:12127468-12127487 MS.gene27947:CDS 30.0%
! GAGTAATATGGTTTTCGAAA+GGG - chr4.4:12125969-12125988 MS.gene27947:intron 30.0%
! GGAGTTTATAGATTTTCAGA+TGG - chr4.4:12125613-12125632 MS.gene27947:intron 30.0%
! GTTTATAGATTTTCAGATGG+AGG - chr4.4:12125616-12125635 MS.gene27947:intron 30.0%
! TGAGTAATATGGTTTTCGAA+AGG - chr4.4:12125968-12125987 MS.gene27947:intron 30.0%
! TTTGATGGTTGTTGGTTAAA+TGG - chr4.4:12125574-12125593 MS.gene27947:intron 30.0%
!! TTTAACGGTGATGTTTTTGA+TGG - chr4.4:12125559-12125578 MS.gene27947:intron 30.0%
!!! ACTTTGTTGTTTTCTTCGTT+AGG - chr4.4:12127104-12127123 MS.gene27947:intron 30.0%
!!! ATGACCTGACTTTATTTTTC+TGG - chr4.4:12128374-12128393 MS.gene27947:CDS 30.0%
!!! TGACTTTATTTTTCTGGTTC+AGG - chr4.4:12128380-12128399 MS.gene27947:CDS 30.0%
AAAGGAACATTCTATCCTTC+TGG - chr4.4:12125679-12125698 MS.gene27947:CDS 35.0%
AAAGGGAAAATAGATGGAAG+GGG - chr4.4:12125523-12125542 MS.gene27947:CDS 35.0%
AATGAATACCTGAAGACCAT+AGG + chr4.4:12126491-12126510 None:intergenic 35.0%
AATGTATTCCCTCTAATGTG+AGG + chr4.4:12128779-12128798 None:intergenic 35.0%
AATTACTTTCCCTTCAGACA+AGG + chr4.4:12128337-12128356 None:intergenic 35.0%
ACAAATGGACATCATGTACT+CGG + chr4.4:12126672-12126691 None:intergenic 35.0%
ACCTTCGTAAACATCTGAAT+TGG + chr4.4:12125425-12125444 None:intergenic 35.0%
AGAAATGTTCAAATTGGACG+CGG - chr4.4:12126646-12126665 MS.gene27947:intron 35.0%
ATATACTAACCATCTGCAGA+AGG + chr4.4:12128547-12128566 None:intergenic 35.0%
ATATCCCTCACAAATTGATG+CGG - chr4.4:12127771-12127790 MS.gene27947:CDS 35.0%
ATATCTTCAGCTGGAAAAAG+TGG - chr4.4:12126713-12126732 MS.gene27947:intron 35.0%
ATGAATACCTGAAGACCATA+GGG + chr4.4:12126490-12126509 None:intergenic 35.0%
ATGGAAAAATGACAGGGAAA+GGG - chr4.4:12125248-12125267 MS.gene27947:intron 35.0%
ATGTTTACTCCTAATTGCAC+CGG + chr4.4:12128993-12129012 None:intergenic 35.0%
CACTGTAGGAAAAATTACAC+CGG - chr4.4:12126337-12126356 MS.gene27947:intron 35.0%
CAGATGTTTACGAAGGTTTA+TGG - chr4.4:12125428-12125447 MS.gene27947:CDS 35.0%
CCTAAATACTACCATCATGT+AGG - chr4.4:12126953-12126972 MS.gene27947:CDS 35.0%
CCTACATGATGGTAGTATTT+AGG + chr4.4:12126956-12126975 None:intergenic 35.0%
GAACATTTCTCTCAAATTCC+TGG + chr4.4:12126636-12126655 None:intergenic 35.0%
GAAGAGAAGTCCTTTACAAA+TGG - chr4.4:12125130-12125149 MS.gene27947:CDS 35.0%
GACAGTATCATGGTAGTAAT+AGG - chr4.4:12128011-12128030 MS.gene27947:intron 35.0%
GAGGACTTTATATTGGAACA+TGG - chr4.4:12125635-12125654 MS.gene27947:intron 35.0%
GATAAGGATGTACTTTCCTA+AGG - chr4.4:12126406-12126425 MS.gene27947:intron 35.0%
GCACTAGATTTACTCAAACA+AGG - chr4.4:12128680-12128699 MS.gene27947:CDS 35.0%
GGAACATTCACAAAATCGAA+CGG - chr4.4:12125337-12125356 MS.gene27947:intron 35.0%
GGATAGATGGAAAAATGACA+GGG - chr4.4:12125242-12125261 MS.gene27947:intron 35.0%
GGGATTATGAAGTGGTTTAA+CGG - chr4.4:12125544-12125563 MS.gene27947:intron 35.0%
GGTATCTGGTATGAGTAATA+TGG - chr4.4:12125957-12125976 MS.gene27947:intron 35.0%
GTAGACATCACCATTTGTAA+AGG + chr4.4:12125143-12125162 None:intergenic 35.0%
TACGAAGGTTTATGGAAAGA+AGG - chr4.4:12125436-12125455 MS.gene27947:CDS 35.0%
TATAGTTTACCTTCTGCAGA+TGG - chr4.4:12128535-12128554 MS.gene27947:CDS 35.0%
TATGATGTGGTACTCTACAT+GGG - chr4.4:12129083-12129102 MS.gene27947:CDS 35.0%
TCAGATGGAGGACTTTATAT+TGG - chr4.4:12125628-12125647 MS.gene27947:intron 35.0%
TCCAATTCAGATGTTTACGA+AGG - chr4.4:12125421-12125440 MS.gene27947:CDS 35.0%
TCGCTAAAATTTGCAATAGC+AGG + chr4.4:12128138-12128157 None:intergenic 35.0%
TGAAGGGAAAGTAATTTACC+TGG - chr4.4:12128341-12128360 MS.gene27947:CDS 35.0%
TGGATAGATGGAAAAATGAC+AGG - chr4.4:12125241-12125260 MS.gene27947:intron 35.0%
TGGTTAAAATATCCACAAGC+CGG - chr4.4:12127853-12127872 MS.gene27947:CDS 35.0%
TTATGATGTGGTACTCTACA+TGG - chr4.4:12129082-12129101 MS.gene27947:CDS 35.0%
TTCGAAAGGGAATATATGCA+AGG - chr4.4:12125982-12126001 MS.gene27947:intron 35.0%
TTCTAAATAACTGGCATCAG+AGG + chr4.4:12128570-12128589 None:intergenic 35.0%
! ACAAATGGTGATGTCTACAT+TGG - chr4.4:12125145-12125164 MS.gene27947:CDS 35.0%
! ATCAAACTGCAGTGATTTGT+AGG + chr4.4:12129159-12129178 None:intergenic 35.0%
! GCATACATTCCTCTTGTTAT+AGG - chr4.4:12126913-12126932 MS.gene27947:intron 35.0%
! GTACACCATTTCTTTAGAGA+TGG + chr4.4:12125715-12125734 None:intergenic 35.0%
! TATGCAAGGAGTTCTAATTG+TGG - chr4.4:12125996-12126015 MS.gene27947:intron 35.0%
! TGAACTTTTTGATCTACCAC+TGG + chr4.4:12125812-12125831 None:intergenic 35.0%
! TGGTTAAATGGACTTAGACA+AGG - chr4.4:12125586-12125605 MS.gene27947:intron 35.0%
! TGTAGCAATTTTGCTCTTCT+AGG - chr4.4:12127379-12127398 MS.gene27947:intron 35.0%
!! CATGGATAAAAAGGTATTCC+CGG - chr4.4:12129235-12129254 MS.gene27947:intron 35.0%
!! GTGATGTTTTTGATGGTTGT+TGG - chr4.4:12125566-12125585 MS.gene27947:intron 35.0%
!! TAGTTTGCTTCAAGAAGACA+AGG - chr4.4:12129028-12129047 MS.gene27947:CDS 35.0%
!! TTTGGACGGACTAATAATAC+TGG - chr4.4:12127517-12127536 MS.gene27947:CDS 35.0%
!!! GCTTGTGGATATTTTAACCA+AGG + chr4.4:12127853-12127872 None:intergenic 35.0%
AAATACTCACCTTGCAGTAC+CGG + chr4.4:12128846-12128865 None:intergenic 40.0%
AACATGGAGTAAAGGCCTAA+AGG - chr4.4:12125651-12125670 MS.gene27947:intron 40.0%
AAGGATGTACTTTCCTAAGG+AGG - chr4.4:12126409-12126428 MS.gene27947:intron 40.0%
AAGGCAGCGGAAAATTTACT+TGG - chr4.4:12125467-12125486 MS.gene27947:CDS 40.0%
AAGGGAAAATAGATGGAAGG+GGG - chr4.4:12125524-12125543 MS.gene27947:CDS 40.0%
ACTGTTCTGTAGACTTCTAC+TGG - chr4.4:12126453-12126472 MS.gene27947:intron 40.0%
AGATGGATCGGTATATGAAG+GGG - chr4.4:12125216-12125235 MS.gene27947:CDS 40.0%
AGGATGTACTTTCCTAAGGA+GGG - chr4.4:12126410-12126429 MS.gene27947:intron 40.0%
AGGGAAAGTAATTTACCTGG+TGG - chr4.4:12128344-12128363 MS.gene27947:CDS 40.0%
AGGTATTTCGATTCATCGCT+GGG + chr4.4:12127746-12127765 None:intergenic 40.0%
ATCAACTTCCTTGTTACCGA+TGG + chr4.4:12128813-12128832 None:intergenic 40.0%
ATCCATCGAATAACACTGAG+AGG - chr4.4:12127013-12127032 MS.gene27947:CDS 40.0%
ATCGAATAACACTGAGAGGT+GGG - chr4.4:12127017-12127036 MS.gene27947:CDS 40.0%
ATGAATGTTCCTCAGATTGC+CGG - chr4.4:12128971-12128990 MS.gene27947:CDS 40.0%
ATTATTGCCCTATGGTCTTC+AGG - chr4.4:12126480-12126499 MS.gene27947:intron 40.0%
CAGATGGATCGGTATATGAA+GGG - chr4.4:12125215-12125234 MS.gene27947:CDS 40.0%
CAGGGAAAGGGATACTTATA+TGG - chr4.4:12125260-12125279 MS.gene27947:intron 40.0%
CTAAAGGACATATCTTCAGC+TGG - chr4.4:12126704-12126723 MS.gene27947:intron 40.0%
CTCAGATTGACCTTCATTAG+AGG + chr4.4:12125938-12125957 None:intergenic 40.0%
CTCTAATGAAGGTCAATCTG+AGG - chr4.4:12125936-12125955 MS.gene27947:intron 40.0%
CTGGAAAGATTATTGCCCTA+TGG - chr4.4:12126472-12126491 MS.gene27947:intron 40.0%
CTTCGTGCACTCATGAAAAA+AGG - chr4.4:12127954-12127973 MS.gene27947:intron 40.0%
GAGTACATGATGTCCATTTG+TGG - chr4.4:12126671-12126690 MS.gene27947:intron 40.0%
GATGGAAAAATGACAGGGAA+AGG - chr4.4:12125247-12125266 MS.gene27947:intron 40.0%
GCAACTAACAACAAGCCTTT+CGG + chr4.4:12128722-12128741 None:intergenic 40.0%
GCAATTAGGAGTAAACATGC+CGG - chr4.4:12128995-12129014 MS.gene27947:CDS 40.0%
GGTTAAAATATCCACAAGCC+GGG - chr4.4:12127854-12127873 MS.gene27947:CDS 40.0%
GTTCCTAATGTAATAGCGAG+CGG + chr4.4:12128891-12128910 None:intergenic 40.0%
TAGAAGTCTACAGAACAGTG+TGG + chr4.4:12126452-12126471 None:intergenic 40.0%
TAGAGCACAATCACCACAAA+TGG + chr4.4:12126687-12126706 None:intergenic 40.0%
TAGAGCTCCAGAGAATCTAA+AGG - chr4.4:12128477-12128496 MS.gene27947:CDS 40.0%
TATGAAGGGGATTGGATAGA+TGG - chr4.4:12125229-12125248 MS.gene27947:intron 40.0%
TATGGTCCATCAAGCAAAAG+AGG + chr4.4:12126817-12126836 None:intergenic 40.0%
TCAATTCTCAGGTACACTGT+AGG - chr4.4:12126323-12126342 MS.gene27947:intron 40.0%
TCAGATGGATCGGTATATGA+AGG - chr4.4:12125214-12125233 MS.gene27947:CDS 40.0%
TGAACTTCTCCTTGTCTGAA+GGG - chr4.4:12128325-12128344 MS.gene27947:CDS 40.0%
TGAGCAGAACCTATAACAAG+AGG + chr4.4:12126925-12126944 None:intergenic 40.0%
TGCAATAGCAGGATCTAACA+AGG + chr4.4:12128127-12128146 None:intergenic 40.0%
TTATCGCAGACCTCTAATGA+AGG - chr4.4:12125925-12125944 MS.gene27947:intron 40.0%
TTCAGCTTTCTTGCTTTCGT+TGG - chr4.4:12127563-12127582 MS.gene27947:CDS 40.0%
TTCTCCGGGAATTATCTTCA+CGG - chr4.4:12125310-12125329 MS.gene27947:intron 40.0%
TTCTCTAGACTGCAAGTTCT+TGG - chr4.4:12128408-12128427 MS.gene27947:CDS 40.0%
TTGAACTTCTCCTTGTCTGA+AGG - chr4.4:12128324-12128343 MS.gene27947:CDS 40.0%
TTGGAGAAAGAGCTAGGATA+AGG - chr4.4:12126390-12126409 MS.gene27947:intron 40.0%
TTGTGGTGATTGTGCTCTAA+AGG - chr4.4:12126688-12126707 MS.gene27947:intron 40.0%
TTTGCTTCAAGAAGACAAGG+TGG - chr4.4:12129031-12129050 MS.gene27947:CDS 40.0%
! AAGGTATTTCGATTCATCGC+TGG + chr4.4:12127747-12127766 None:intergenic 40.0%
! AATGGACTTAGACAAGGATC+TGG - chr4.4:12125592-12125611 MS.gene27947:intron 40.0%
! ACATTGAGAGCATACTCCAT+CGG - chr4.4:12128794-12128813 MS.gene27947:CDS 40.0%
! ATCAGAAGTAGAGCTTTTCG+AGG - chr4.4:12129058-12129077 MS.gene27947:CDS 40.0%
! ATGTTCCTTTTCCGTCCTTT+AGG + chr4.4:12125669-12125688 None:intergenic 40.0%
! TAGTCACCTCTTTTGCTTGA+TGG - chr4.4:12126808-12126827 MS.gene27947:intron 40.0%
!! CTGAAGCTTAATTTGCAGCT+TGG - chr4.4:12126141-12126160 MS.gene27947:intron 40.0%
!! CTGATGAGAAATTGATAGCG+AGG - chr4.4:12127816-12127835 MS.gene27947:CDS 40.0%
!! CTGATTTTGGAGAAAGAGCT+AGG - chr4.4:12126384-12126403 MS.gene27947:intron 40.0%
!! GAAGTTGATCTTTTACTGCC+CGG - chr4.4:12128824-12128843 MS.gene27947:CDS 40.0%
!! GCTTTTCGAGGTTTATGATG+TGG - chr4.4:12129070-12129089 MS.gene27947:CDS 40.0%
!! GTTGTTTTCTTCGTTAGGTG+CGG - chr4.4:12127109-12127128 MS.gene27947:intron 40.0%
!! TTAATTTGCAGCTTGGCATC+AGG - chr4.4:12126148-12126167 MS.gene27947:intron 40.0%
!!! GAGCTTTTTCAGAGAGACTA+CGG + chr4.4:12125786-12125805 None:intergenic 40.0%
AAAGGCCTAAAGGACGGAAA+AGG - chr4.4:12125661-12125680 MS.gene27947:intron 45.0%
AACACTGAGAGGTGGGAAAA+AGG - chr4.4:12127024-12127043 MS.gene27947:CDS 45.0%
AAGTCTACAGAACAGTGTGG+AGG + chr4.4:12126449-12126468 None:intergenic 45.0%
AATACTCACCTTGCAGTACC+GGG + chr4.4:12128845-12128864 None:intergenic 45.0%
ACGAACGCCTTTAGATTCTC+TGG + chr4.4:12128487-12128506 None:intergenic 45.0%
AGCAAACTAGTAGCTTGAGC+CGG + chr4.4:12129017-12129036 None:intergenic 45.0%
AGCATACTCCATCGGTAACA+AGG - chr4.4:12128802-12128821 MS.gene27947:CDS 45.0%
ATGAATGCTCATCACGGGAT+TGG - chr4.4:12125385-12125404 MS.gene27947:CDS 45.0%
ATGGAAGGGGGATTATGAAG+TGG - chr4.4:12125536-12125555 MS.gene27947:intron 45.0%
ATTAGAGGTCTGCGATAACG+CGG + chr4.4:12125923-12125942 None:intergenic 45.0%
CAGGTCATATCATAACCACC+AGG + chr4.4:12128362-12128381 None:intergenic 45.0%
CATCGAATAACACTGAGAGG+TGG - chr4.4:12127016-12127035 MS.gene27947:CDS 45.0%
CATCGTCGTTACGATCTGAA+GGG - chr4.4:12127174-12127193 MS.gene27947:intron 45.0%
GACATATGCAATCGTCAGCA+GGG + chr4.4:12125888-12125907 None:intergenic 45.0%
GAGCAGTTGATCATTCCGAA+AGG - chr4.4:12128704-12128723 MS.gene27947:CDS 45.0%
GATCGGTATATGAAGGGGAT+TGG - chr4.4:12125221-12125240 MS.gene27947:CDS 45.0%
GATCTGAAGGGATCTTCTCA+AGG - chr4.4:12127186-12127205 MS.gene27947:CDS 45.0%
GCTTCAGATAATAGCTTCGG+CGG + chr4.4:12126128-12126147 None:intergenic 45.0%
GCTTTCTTGCTTTCGTTGGT+AGG - chr4.4:12127567-12127586 MS.gene27947:CDS 45.0%
GGGAATTATCTTCACGGTCA+CGG - chr4.4:12125316-12125335 MS.gene27947:intron 45.0%
GGGATACTTATATGGCCATC+AGG - chr4.4:12125268-12125287 MS.gene27947:intron 45.0%
GTACACATGGTCAGATGGAT+CGG - chr4.4:12125204-12125223 MS.gene27947:CDS 45.0%
GTCAATTGTGAACCCTCCTT+AGG + chr4.4:12126425-12126444 None:intergenic 45.0%
GTGACCGTGAAGATAATTCC+CGG + chr4.4:12125317-12125336 None:intergenic 45.0%
TGAGTGCACGAAGCATATTG+AGG + chr4.4:12127947-12127966 None:intergenic 45.0%
TGGAAAGAAGGAATTCGCGA+AGG - chr4.4:12125448-12125467 MS.gene27947:CDS 45.0%
TGGAGGATGAATGCTCATCA+CGG - chr4.4:12125379-12125398 MS.gene27947:CDS 45.0%
TGGAGTAAAGGCCTAAAGGA+CGG - chr4.4:12125655-12125674 MS.gene27947:intron 45.0%
TTGCCGCTCGCTATTACATT+AGG - chr4.4:12128885-12128904 MS.gene27947:CDS 45.0%
! CACCTCTCAGTGTTATTCGA+TGG + chr4.4:12127018-12127037 None:intergenic 45.0%
! GAAGGTCAATCTGAGGTATC+TGG - chr4.4:12125943-12125962 MS.gene27947:intron 45.0%
! GAAGTTCGGTCGTCTGATTT+TGG - chr4.4:12126371-12126390 MS.gene27947:intron 45.0%
! GATGGTTGTTTGCTACCAGA+AGG + chr4.4:12125697-12125716 None:intergenic 45.0%
! TTCAAGGGTATACTTCCCCA+CGG - chr4.4:12125172-12125191 MS.gene27947:CDS 45.0%
!! AGAAATTGATAGCGAGGTCG+AGG - chr4.4:12127822-12127841 MS.gene27947:CDS 45.0%
!! TAGGTGCGGTTTGTTGTCAT+GGG - chr4.4:12127123-12127142 MS.gene27947:intron 45.0%
!! TTAGGTGCGGTTTGTTGTCA+TGG - chr4.4:12127122-12127141 MS.gene27947:intron 45.0%
!! AAAAAAATAAAATACAATAA+TGG - chr4.4:12127702-12127721 MS.gene27947:intron 5.0%
AACGGCTGTGTTTACACTGG+TGG - chr4.4:12125355-12125374 MS.gene27947:intron 50.0%
AAGTACGAGGGCGAATTCTC+CGG - chr4.4:12125295-12125314 MS.gene27947:intron 50.0%
ACCAGCCGCATCAATTTGTG+AGG + chr4.4:12127779-12127798 None:intergenic 50.0%
CCAGCCGCATCAATTTGTGA+GGG + chr4.4:12127778-12127797 None:intergenic 50.0%
CCATCAGGAGCAAAGTACGA+GGG - chr4.4:12125283-12125302 MS.gene27947:intron 50.0%
CCATCGTCGTTACGATCTGA+AGG - chr4.4:12127173-12127192 MS.gene27947:intron 50.0%
CCTTCAGATCGTAACGACGA+TGG + chr4.4:12127176-12127195 None:intergenic 50.0%
CGACATATGCAATCGTCAGC+AGG + chr4.4:12125889-12125908 None:intergenic 50.0%
CTCAGATTGCCGGTGCAATT+AGG - chr4.4:12128981-12129000 MS.gene27947:CDS 50.0%
GATAATAGCTTCGGCGGTGT+TGG + chr4.4:12126122-12126141 None:intergenic 50.0%
GCTGTGTTTACACTGGTGGA+TGG - chr4.4:12125359-12125378 MS.gene27947:intron 50.0%
GGAGGATGAATGCTCATCAC+GGG - chr4.4:12125380-12125399 MS.gene27947:CDS 50.0%
TACTGACGCTGTATTGCTCC+AGG + chr4.4:12128517-12128536 None:intergenic 50.0%
TCGAACGGCTGTGTTTACAC+TGG - chr4.4:12125352-12125371 MS.gene27947:intron 50.0%
TCTGAAAAAGCTCGAGCCAG+TGG - chr4.4:12125793-12125812 MS.gene27947:CDS 50.0%
TTCCCTCTAATGTGAGGTCC+AGG + chr4.4:12128773-12128792 None:intergenic 50.0%
! CTAATTGCACCGGCAATCTG+AGG + chr4.4:12128983-12129002 None:intergenic 50.0%
! GGGAAGTACACATGGTCAGA+TGG - chr4.4:12125199-12125218 MS.gene27947:CDS 50.0%
! GTGTTTACACTGGTGGATGG+AGG - chr4.4:12125362-12125381 MS.gene27947:intron 50.0%
! TTTTACTGCCCGGTACTGCA+AGG - chr4.4:12128834-12128853 MS.gene27947:CDS 50.0%
ACGCCTGGACCTCACATTAG+AGG - chr4.4:12128767-12128786 MS.gene27947:CDS 55.0%
AGTACGAGGGCGAATTCTCC+GGG - chr4.4:12125296-12125315 MS.gene27947:intron 55.0%
ATGTGTACTTCCCGTTGCCG+TGG + chr4.4:12125192-12125211 None:intergenic 55.0%
CCCTCACAAATTGATGCGGC+TGG - chr4.4:12127775-12127794 MS.gene27947:CDS 55.0%
CCCTCGTACTTTGCTCCTGA+TGG + chr4.4:12125286-12125305 None:intergenic 55.0%
CGCCTGGACCTCACATTAGA+GGG - chr4.4:12128768-12128787 MS.gene27947:CDS 55.0%
GAAGGAATTCGCGAAGGCAG+CGG - chr4.4:12125454-12125473 MS.gene27947:CDS 55.0%
GCCATCAGGAGCAAAGTACG+AGG - chr4.4:12125282-12125301 MS.gene27947:intron 55.0%
GGTATACTTCCCCACGGCAA+CGG - chr4.4:12125178-12125197 MS.gene27947:CDS 55.0%
GTATACTTCCCCACGGCAAC+GGG - chr4.4:12125179-12125198 MS.gene27947:CDS 55.0%
TCCTCATTCACCTCGCAACC+CGG + chr4.4:12127875-12127894 None:intergenic 55.0%
TGACGCTGTATTGCTCCAGG+AGG + chr4.4:12128514-12128533 None:intergenic 55.0%
TGTGTACTTCCCGTTGCCGT+GGG + chr4.4:12125191-12125210 None:intergenic 55.0%
! ACGGCAACGGGAAGTACACA+TGG - chr4.4:12125191-12125210 MS.gene27947:CDS 55.0%
CGAACTTCGCGTGCAGGAAC+CGG + chr4.4:12126359-12126378 None:intergenic 60.0%
CGGTTCCTGCACGCGAAGTT+CGG - chr4.4:12126357-12126376 MS.gene27947:intron 60.0%
GCGAGGTCGAGGTACAACCT+TGG - chr4.4:12127833-12127852 MS.gene27947:CDS 60.0%
GGTCTGCGATAACGCGGATG+AGG + chr4.4:12125917-12125936 None:intergenic 60.0%
GTGTACTTCCCGTTGCCGTG+GGG + chr4.4:12125190-12125209 None:intergenic 60.0%
TATCCACAAGCCGGGTTGCG+AGG - chr4.4:12127862-12127881 MS.gene27947:CDS 60.0%
! AAGGCGTTCGTCGAACCTCC+TGG - chr4.4:12128496-12128515 MS.gene27947:CDS 60.0%
AGCTTCGTCAACGCGACGCC+TGG - chr4.4:12128752-12128771 MS.gene27947:CDS 65.0%
GACGACCGAACTTCGCGTGC+AGG + chr4.4:12126365-12126384 None:intergenic 65.0%
GCCGGGTTGCGAGGTGAATG+AGG - chr4.4:12127871-12127890 MS.gene27947:CDS 65.0%
! GGCGTCGCGTTGACGAAGCT+CGG + chr4.4:12128752-12128771 None:intergenic 65.0%
! TCACCTCGCAACCCGGCTTG+TGG + chr4.4:12127868-12127887 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 12124963 12129268 12124963 ID=MS.gene27947
chr4.4 mRNA 12124963 12129268 12124963 ID=MS.gene27947.t1;Parent=MS.gene27947
chr4.4 exon 12129252 12129268 12129252 ID=MS.gene27947.t1.exon1;Parent=MS.gene27947.t1
chr4.4 CDS 12129252 12129268 12129252 ID=cds.MS.gene27947.t1;Parent=MS.gene27947.t1
chr4.4 exon 12128062 12129105 12128062 ID=MS.gene27947.t1.exon2;Parent=MS.gene27947.t1
chr4.4 CDS 12128062 12129105 12128062 ID=cds.MS.gene27947.t1;Parent=MS.gene27947.t1
chr4.4 exon 12127730 12127897 12127730 ID=MS.gene27947.t1.exon3;Parent=MS.gene27947.t1
chr4.4 CDS 12127730 12127897 12127730 ID=cds.MS.gene27947.t1;Parent=MS.gene27947.t1
chr4.4 exon 12127429 12127594 12127429 ID=MS.gene27947.t1.exon4;Parent=MS.gene27947.t1
chr4.4 CDS 12127429 12127594 12127429 ID=cds.MS.gene27947.t1;Parent=MS.gene27947.t1
chr4.4 exon 12127186 12127296 12127186 ID=MS.gene27947.t1.exon5;Parent=MS.gene27947.t1
chr4.4 CDS 12127186 12127296 12127186 ID=cds.MS.gene27947.t1;Parent=MS.gene27947.t1
chr4.4 exon 12126918 12127105 12126918 ID=MS.gene27947.t1.exon6;Parent=MS.gene27947.t1
chr4.4 CDS 12126918 12127105 12126918 ID=cds.MS.gene27947.t1;Parent=MS.gene27947.t1
chr4.4 exon 12125675 12125829 12125675 ID=MS.gene27947.t1.exon7;Parent=MS.gene27947.t1
chr4.4 CDS 12125675 12125829 12125675 ID=cds.MS.gene27947.t1;Parent=MS.gene27947.t1
chr4.4 exon 12125376 12125544 12125376 ID=MS.gene27947.t1.exon8;Parent=MS.gene27947.t1
chr4.4 CDS 12125376 12125544 12125376 ID=cds.MS.gene27947.t1;Parent=MS.gene27947.t1
chr4.4 exon 12124963 12125245 12124963 ID=MS.gene27947.t1.exon9;Parent=MS.gene27947.t1
chr4.4 CDS 12124963 12125245 12124963 ID=cds.MS.gene27947.t1;Parent=MS.gene27947.t1
Gene Sequence

>MS.gene27947

ATGGAGGACAATGGAAGGTAATGTTCATAGAAACTACTACTCTTTCCTATTCATTCTCTTTTGTTTTGTATTTTGTTTTGTTTTGTTTTGTTTTGACTCTGTGTATTCTGTTCTGTATGCAAGTAGCAATGTATTGTTATTTAACTGTTTCTTGTTAATGTAGGTTTGAAGAGAAGTCCTTTACAAATGGTGATGTCTACATTGGTAAATTCAAGGGTATACTTCCCCACGGCAACGGGAAGTACACATGGTCAGATGGATCGGTATATGAAGGGGATTGGATAGATGGAAAAATGACAGGGAAAGGGATACTTATATGGCCATCAGGAGCAAAGTACGAGGGCGAATTCTCCGGGAATTATCTTCACGGTCACGGAACATTCACAAAATCGAACGGCTGTGTTTACACTGGTGGATGGAGGATGAATGCTCATCACGGGATTGGACGAAAAGTGTATTCCAATTCAGATGTTTACGAAGGTTTATGGAAAGAAGGAATTCGCGAAGGCAGCGGAAAATTTACTTGGAATGATGGAAGTATCTATATTGGAAATTGGAAAAAAGGGAAAATAGATGGAAGGGGGATTATGAAGTGGTTTAACGGTGATGTTTTTGATGGTTGTTGGTTAAATGGACTTAGACAAGGATCTGGAGTTTATAGATTTTCAGATGGAGGACTTTATATTGGAACATGGAGTAAAGGCCTAAAGGACGGAAAAGGAACATTCTATCCTTCTGGTAGCAAACAACCATCTCTAAAGAAATGGTGTACCAATCTTCATAGCAATGAGAATTGTAAGGTTCCAAATTCAAGATTTAACCGTAGTCTCTCTGAAAAAGCTCGAGCCAGTGGTAGATCAAAAAGTTCACGTCATTTATCTCAAAGTACTTCATTGTTGGATGAGAATTGTGTGATTCAAAACCCTGCTGACGATTGCATATGTCGTGATTCCTCATCCGCGTTATCGCAGACCTCTAATGAAGGTCAATCTGAGGTATCTGGTATGAGTAATATGGTTTTCGAAAGGGAATATATGCAAGGAGTTCTAATTGTGGAGAGACTTCGTGAGTATTCAGAAATATCGCATAATAAGAACAAAAAGGAAAGTAAATTTAGTATGAAGCAAGTAAAGAAGAGTTCAATTATAGGCACTTTCCAACACCGCCGAAGCTATTATCTGAAGCTTAATTTGCAGCTTGGCATCAGGTAAATTATTTGATCTCTAATAATATTTTCGAAAAACATATCTAGTCTTCATGATTGCTAGTATTATCAGCATTCTTTCAAATGTTCTACACTTGAATATTTATTTATTTGGTATTATGTTTTATACGAAGCTTTGATTTTAATTTTTTTTGCTCAATTCTCAGGTACACTGTAGGAAAAATTACACCGGTTCCTGCACGCGAAGTTCGGTCGTCTGATTTTGGAGAAAGAGCTAGGATAAGGATGTACTTTCCTAAGGAGGGTTCACAATTGACTCCTCCACACTGTTCTGTAGACTTCTACTGGAAAGATTATTGCCCTATGGTCTTCAGGTATTCATTATCAGAATAACATGTATATAGGTTCTTGATATAATATGATTTTATGATTATTGTGGCATATTAGAGTTCTTAGTCAGAGTTATGATTATAAGCACATATTCTTAATGTGATTTCATATATTTCCAGGAATTTGAGAGAAATGTTCAAATTGGACGCGGCCGAGTACATGATGTCCATTTGTGGTGATTGTGCTCTAAAGGACATATCTTCAGCTGGAAAAAGTGGCAGCATATTCTTTATTTCTCAAGATGACAAATTTGTGATCAAGACACTAAAAAAATATGAGCTAAAGGTTTGTAGTCACCTCTTTTGCTTGATGGACCATATTAACTTTTAATTAAGTTATTTTGATTTGAATTCATCAAATACATGAATCCTGACTTCTTAAGTACTTAATTACGTGCATACATTCCTCTTGTTATAGGTTCTGCTCAATATGCTTCCTAAATACTACCATCATGTAGGAAGTTATGAAAATACTCTTATTACAAAATTCTTCGGGATCCATCGAATAACACTGAGAGGTGGGAAAAAGGTATTACCTAATATCCGTCTTTACTTCTTTCTTCTTGTTAATTGGTTTAACCATAAATACTTTGTTGTTTTCTTCGTTAGGTGCGGTTTGTTGTCATGGGAAATATGTTTTGCACAGAACTTCATATCCATCGTCGTTACGATCTGAAGGGATCTTCTCAAGGAAGATATACAAGCCAAGATAAAATTAATAGCAATACAACATTGAAAGATCTTGATCTAAAATACGAATTTCATATGGATAAAAAGTTGCGAGAATCGTTATTCAAGTAAGTTCCTACTTTATAAGAGTAACTTTTATAGTAAGCAGTACTTGTTGACAAATTTCTAGAAATGTAGCAATTTTGCTCTTCTAGGTAGAACAAATATTTCCTATTTCATGATTATGTTAGTATTTTATTTCCCATAGGAAATGCTTTACTACTTTGTTATCGTAAGTACTATGGCGTCTAACAGTAATACAATTTTACTTTTTGGACGGACTAATAATACTGGCACAATATGGATCTGTCAGAATTTTCAGCTTTCTTGCTTTCGTTGGTAGGATTTCATCCTTAAATAAAACAAAAGATATTAGTGGCACCAATGAAACAAATATTTTTATTTCAATTCTAATTTCTATATTTTATATGTAATAATGGACAGATTTCTGTCTAAAAAAAAATAAAATACAATAATGGACATATTAGTAACAGAATCCCAGCGATGAATCGAAATACCTTATTGATATCCCTCACAAATTGATGCGGCTGGTAAAGAAGCGTCAATTTGCTGATGAGAAATTGATAGCGAGGTCGAGGTACAACCTTGGTTAAAATATCCACAAGCCGGGTTGCGAGGTGAATGAGGAAGAGAGATAACGTAATTGTCCAAAGCTTTACAAATAGAGAGACAATCAACCTCAATATGCTTCGTGCACTCATGAAAAAAGGATTATAGCAACTTGATTACGATGTATCTCTTATTGACAGTATCATGGTAGTAATAGGATGTATCTTTATTCACCGAAAATTAAACAGATGATTTTATGAAATATAAGTGTAAAGAAATATTGGATGATATCTATGTTGAACAACGCTCCTTGTTAGATCCTGCTATTGCAAATTTTAGCGAAAGTCATGAAAAGTTGAGTTTCTTCATGTTTCTACATTAAAAAGATTTAATACGAAGACCACAATTTCAGATTTTGATAGTACTTGGCTTATTACATGAGATAATACTGATTTATGACTGTTAGCTATATTGTATATGCACAAAAATATTTATCATGACAATTCTGTTGAACTTCTCCTTGTCTGAAGGGAAAGTAATTTACCTGGTGGTTATGATATGACCTGACTTTATTTTTCTGGTTCAGGCAAATTTCTCTAGACTGCAAGTTCTTGGAATCTCAGCACATAATTGATTACAGTCTTCTGTTGGGATTGCATTTTAGAGCTCCAGAGAATCTAAAGGCGTTCGTCGAACCTCCTGGAGCAATACAGCGTCAGTATAGTTTACCTTCTGCAGATGGTTAGTATATCCTCTGATGCCAGTTATTTAGAATATGATATGAAAATTTTCTTCCCAAGCCTAGTGATTATATATTGATATCATTATTTTTTTTTCTAACGAACATATCGACTTGACTTACTTGCACTAGATTTACTCAAACAAGGGGAGCAGTTGATCATTCCGAAAGGCTTGTTGTTAGTTGCACATGAACCGAGCTTCGTCAACGCGACGCCTGGACCTCACATTAGAGGGAATACATTGAGAGCATACTCCATCGGTAACAAGGAAGTTGATCTTTTACTGCCCGGTACTGCAAGGTGAGTATTTTCTATAACATCAGTTTCTCTTGCCGCTCGCTATTACATTAGGAACTTAAGATCACTAAACTAGGATTGTAAATTTGTAATAATTGTATGATATATATAATAAATAATGAATGTTCCTCAGATTGCCGGTGCAATTAGGAGTAAACATGCCGGCTCAAGCTACTAGTTTGCTTCAAGAAGACAAGGTGGAAGAATCAGAAGTAGAGCTTTTCGAGGTTTATGATGTGGTACTCTACATGGGAATAATAGATATACTTCAGGAATACACTGTCAAAAAGAAACTTGAGCATGCCTACAAATCACTGCAGTTTGATCCTATGACTATATCAGTAACAGAACCTAAAATTTATGCTGAACGTTTCATCAATTTCATGGATAAAAAGGTATTCCCGGAAATACCGTGA
Protein sequence

>MS.gene27947.t1

MEDNGRFEEKSFTNGDVYIGKFKGILPHGNGKYTWSDGSVYEGDWIDGKMTGKGILIWPSGAKYEGEFSGNYLHGHGTFTKSNGCVYTGGWRMNAHHGIGRKVYSNSDVYEGLWKEGIREGSGKFTWNDGSIYIGNWKKGKIDGRGIMKWFNGDVFDGCWLNGLRQGSGVYRFSDGGLYIGTWSKGLKDGKGTFYPSGSKQPSLKKWCTNLHSNENCKVPNSRFNRSLSEKARASGRSKSSRHLSQSTSLLDENCVIQNPADDCICRDSSSALSQTSNEGQSEVSGMSNMVFEREYMQGVLIVERLREYSEISHNKNKKESKFSMKQVKKSSIIGTFQHRRSYYLKLNLQLGIRYTVGKITPVPAREVRSSDFGERARIRMYFPKEGSQLTPPHCSVDFYWKDYCPMVFRNLREMFKLDAAEYMMSICGDCALKDISSAGKSGSIFFISQDDKFVIKTLKKYELKVLLNMLPKYYHHVGSYENTLITKFFGIHRITLRGGKKVRFVVMGNMFCTELHIHRRYDLKGSSQGRYTSQDKINSNTTLKDLDLKYEFHMDKKLRESLFKQISLDCKFLESQHIIDYSLLLGLHFRAPENLKAFVEPPGAIQRQYSLPSADDLLKQGEQLIIPKGLLLVAHEPSFVNATPGPHIRGNTLRAYSIGNKEVDLLLPGTARLPVQLGVNMPAQATSLLQEDKVEESEVELFEVYDVVLYMGIIDILQEYTVKKKLEHAYKSLQFDPMTISVTEPKIYAERFINFMDKKVFPEIP