Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95877.t1 | XP_003631048.1 | 81.1 | 297 | 0 | 2 | 1 | 242 | 1 | 296 | 7.70E-120 | 439.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95877.t1 | G7LCF7 | 81.1 | 297 | 0 | 2 | 1 | 242 | 1 | 296 | 5.6e-120 | 439.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052289 | MS.gene95877 | 0.823125 | 1.64E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene95877 | -0.8174 | 3.36E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene95877 | -0.800915 | 1.15E-48 | -1.69E-46 |
| MS.gene055729 | MS.gene95877 | 0.820016 | 8.57E-53 | -1.69E-46 |
| MS.gene055730 | MS.gene95877 | 0.815445 | 9.21E-52 | -1.69E-46 |
| MS.gene055731 | MS.gene95877 | 0.818358 | 2.04E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene95877 | -0.817975 | 2.50E-52 | -1.69E-46 |
| MS.gene055977 | MS.gene95877 | 0.80841 | 3.14E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene95877 | -0.801953 | 7.06E-49 | -1.69E-46 |
| MS.gene059855 | MS.gene95877 | 0.803453 | 3.46E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95877.t1 | MTR_8g106580 | 78.716 | 296 | 9 | 2 | 1 | 242 | 1 | 296 | 3.48e-158 | 440 |
| MS.gene95877.t1 | MTR_6g081930 | 76.687 | 163 | 38 | 0 | 80 | 242 | 132 | 294 | 1.67e-86 | 259 |
| MS.gene95877.t1 | MTR_4g075730 | 39.623 | 318 | 109 | 10 | 1 | 241 | 6 | 317 | 2.74e-61 | 195 |
| MS.gene95877.t1 | MTR_0154s0010 | 57.037 | 135 | 58 | 0 | 108 | 242 | 1 | 135 | 9.66e-55 | 172 |
| MS.gene95877.t1 | MTR_2g101870 | 37.621 | 311 | 122 | 10 | 1 | 242 | 2 | 309 | 9.10e-52 | 170 |
| MS.gene95877.t1 | MTR_6g087880 | 41.463 | 164 | 92 | 3 | 80 | 242 | 146 | 306 | 1.46e-37 | 134 |
| MS.gene95877.t1 | MTR_8g086610 | 31.321 | 265 | 132 | 8 | 20 | 241 | 21 | 278 | 3.21e-32 | 119 |
| MS.gene95877.t1 | MTR_3g037650 | 36.310 | 168 | 100 | 3 | 77 | 242 | 111 | 273 | 5.30e-29 | 110 |
| MS.gene95877.t1 | MTR_4g075730 | 38.288 | 222 | 56 | 9 | 1 | 147 | 6 | 221 | 3.56e-28 | 107 |
| MS.gene95877.t1 | MTR_4g094800 | 49.123 | 114 | 37 | 6 | 1 | 93 | 12 | 125 | 4.29e-17 | 76.6 |
| MS.gene95877.t1 | MTR_3g033530 | 31.973 | 147 | 83 | 5 | 88 | 224 | 190 | 329 | 7.03e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95877.t1 | AT5G42860 | 49.051 | 316 | 85 | 6 | 1 | 240 | 1 | 316 | 7.55e-81 | 245 |
| MS.gene95877.t1 | AT1G45688 | 44.083 | 338 | 91 | 7 | 1 | 240 | 1 | 338 | 9.57e-73 | 225 |
| MS.gene95877.t1 | AT4G35170 | 42.857 | 161 | 91 | 1 | 81 | 240 | 137 | 297 | 4.82e-45 | 153 |
| MS.gene95877.t1 | AT1G45688 | 42.857 | 238 | 55 | 7 | 1 | 157 | 1 | 238 | 1.81e-42 | 145 |
| MS.gene95877.t1 | AT2G41990 | 36.513 | 304 | 119 | 10 | 1 | 239 | 1 | 295 | 6.29e-41 | 142 |
| MS.gene95877.t1 | AT3G24600 | 36.875 | 160 | 98 | 2 | 81 | 239 | 144 | 301 | 1.71e-28 | 110 |
| MS.gene95877.t1 | AT3G24605 | 41.935 | 124 | 69 | 2 | 98 | 220 | 156 | 277 | 2.38e-24 | 99.0 |
Find 54 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGTTGTTGTTGAGTTTC+CGG | 0.246762 | 4.3:-794820 | None:intergenic |
| AGCTTATGTGCTTGGGAAAT+TGG | 0.250083 | 4.3:+795796 | MS.gene95877:CDS |
| ATCAATTTCCTTCCATGGTT+TGG | 0.270924 | 4.3:-794855 | None:intergenic |
| TCCTATTCAGAAATCGTAAT+TGG | 0.272853 | 4.3:+795290 | MS.gene95877:CDS |
| GCCAATTACGATTTCTGAAT+AGG | 0.334846 | 4.3:-795291 | None:intergenic |
| CCATTCCACTTCTCAATCAT+AGG | 0.363070 | 4.3:-795909 | None:intergenic |
| CAAACCAAAATACTACAAAA+AGG | 0.374910 | 4.3:+795820 | MS.gene95877:CDS |
| GTTGTTGTTGTTGAGTTTCC+GGG | 0.376955 | 4.3:-794819 | None:intergenic |
| TTTAATGGCACTGGTAAAGT+TGG | 0.388529 | 4.3:-795749 | None:intergenic |
| GAACCCATTGGACTGATAAC+AGG | 0.421746 | 4.3:-794755 | None:intergenic |
| AGATCTAGAGCTTATGTGCT+TGG | 0.422698 | 4.3:+795788 | MS.gene95877:CDS |
| GATCTAGAGCTTATGTGCTT+GGG | 0.431536 | 4.3:+795789 | MS.gene95877:CDS |
| TCTTCCTCTAGCCGTTTCTC+TGG | 0.434741 | 4.3:+794794 | MS.gene95877:CDS |
| CTAGCCGTTTCTCTGGTTCC+CGG | 0.451437 | 4.3:+794801 | MS.gene95877:CDS |
| ATTACATCAATTTCCTTCCA+TGG | 0.454352 | 4.3:-794860 | None:intergenic |
| AGTAGAATGAAAGGAGGTAG+TGG | 0.462601 | 4.3:-794732 | None:intergenic |
| GCTAGTCTTAGCAGCACAAC+TGG | 0.471971 | 4.3:+795722 | MS.gene95877:CDS |
| TACTCCTGTTATCAGTCCAA+TGG | 0.474596 | 4.3:+794751 | MS.gene95877:CDS |
| ACTCCTGTTATCAGTCCAAT+GGG | 0.485989 | 4.3:+794752 | MS.gene95877:CDS |
| ATTAGTGAGTGTGGCAGTGA+TGG | 0.497703 | 4.3:+795670 | MS.gene95877:CDS |
| TAGCACCACTTCCATACAAT+GGG | 0.499784 | 4.3:-795703 | None:intergenic |
| TCCATGGTTTGGTGTTACTA+CGG | 0.502227 | 4.3:-794844 | None:intergenic |
| GGAAGCAAGATCCCATTGTA+TGG | 0.504734 | 4.3:+795692 | MS.gene95877:CDS |
| TCTGAATAGGATAGATCTAA+AGG | 0.513188 | 4.3:-795278 | None:intergenic |
| CAAGCTGGTTCAGATGCAAC+GGG | 0.522817 | 4.3:+795164 | MS.gene95877:CDS |
| TGGTTCAGATGCAACGGGTG+TGG | 0.528116 | 4.3:+795169 | MS.gene95877:CDS |
| AAGATCCCATTGTATGGAAG+TGG | 0.539938 | 4.3:+795698 | MS.gene95877:CDS |
| TCAGAAATCGTAATTGGCAC+TGG | 0.540742 | 4.3:+795296 | MS.gene95877:CDS |
| TTAGTGAGTGTGGCAGTGAT+GGG | 0.543651 | 4.3:+795671 | MS.gene95877:CDS |
| CATAGGTGCAAGACTTCTTG+AGG | 0.543718 | 4.3:-795892 | None:intergenic |
| ATAGGTGCAAGACTTCTTGA+GGG | 0.555809 | 4.3:-795891 | None:intergenic |
| CTAGAGGAAGAGTGAGAATG+AGG | 0.556981 | 4.3:-794782 | None:intergenic |
| GATAACAGGAGTAGAATGAA+AGG | 0.557627 | 4.3:-794741 | None:intergenic |
| TCAAGCTGGTTCAGATGCAA+CGG | 0.562028 | 4.3:+795163 | MS.gene95877:CDS |
| GGACTTTGAACATAGTATGC+TGG | 0.578237 | 4.3:-794689 | None:intergenic |
| GAGCATGTTAGAGTTCAAGC+TGG | 0.583891 | 4.3:+795149 | MS.gene95877:CDS |
| TAGTAACACCAAACCATGGA+AGG | 0.584156 | 4.3:+794847 | MS.gene95877:CDS |
| AACAGGAGTAGAATGAAAGG+AGG | 0.584271 | 4.3:-794738 | None:intergenic |
| GAGGAAGAGTGAGAATGAGG+AGG | 0.592438 | 4.3:-794779 | None:intergenic |
| GTTCAAAGTCCATCCCATGA+TGG | 0.593197 | 4.3:+794701 | MS.gene95877:CDS |
| GAAATTCACTTATCGTAACA+AGG | 0.596007 | 4.3:+795223 | MS.gene95877:CDS |
| GAATGAGGAGGAGAACCCAT+TGG | 0.598887 | 4.3:-794767 | None:intergenic |
| GTTTCCGGGAACCAGAGAAA+CGG | 0.599995 | 4.3:-794805 | None:intergenic |
| CTAGCACCACTTCCATACAA+TGG | 0.615096 | 4.3:-795704 | None:intergenic |
| GAGTCAAAGATTAGTGAGTG+TGG | 0.625033 | 4.3:+795661 | MS.gene95877:CDS |
| ACATAGTATGCTGGTCGACG+AGG | 0.635101 | 4.3:-794680 | None:intergenic |
| ATTCACTGTAATCATATCAG+TGG | 0.649253 | 4.3:-795192 | None:intergenic |
| ATAGGATAGATCTAAAGGTG+TGG | 0.651020 | 4.3:-795273 | None:intergenic |
| GGAACCAGAGAAACGGCTAG+AGG | 0.666320 | 4.3:-794798 | None:intergenic |
| AAATTCACTTATCGTAACAA+GGG | 0.671507 | 4.3:+795224 | MS.gene95877:CDS |
| ATGGTTTGGTGTTACTACGG+TGG | 0.675852 | 4.3:-794841 | None:intergenic |
| ACCGTAGTAACACCAAACCA+TGG | 0.681305 | 4.3:+794843 | MS.gene95877:CDS |
| TCGACGAGGAGATCTTGTTG+TGG | 0.700688 | 4.3:-794666 | None:intergenic |
| GCATACAAAGACAGACTCAG+AGG | 0.705617 | 4.3:+794622 | MS.gene95877:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTGTTATGTCAAAT+GGG | + | chr4.3:795078-795097 | MS.gene95877:intron | 15.0% |
| !!! | CTTTTAATTGTTATGTCAAA+TGG | + | chr4.3:795077-795096 | MS.gene95877:intron | 20.0% |
| ! | AAATTCACTTATCGTAACAA+GGG | + | chr4.3:795224-795243 | MS.gene95877:CDS | 25.0% |
| ! | ATATGATTATCGTGTAAACT+CGG | - | chr4.3:795436-795455 | None:intergenic | 25.0% |
| ! | ATTGATGTAATTGAAGAAGA+AGG | + | chr4.3:794872-794891 | MS.gene95877:intron | 25.0% |
| ! | CAAACCAAAATACTACAAAA+AGG | + | chr4.3:795820-795839 | MS.gene95877:CDS | 25.0% |
| !! | ATCTCAAAGCTCAATTTTAA+TGG | - | chr4.3:795767-795786 | None:intergenic | 25.0% |
| !! | TGAACCTTTTTGTAGTATTT+TGG | - | chr4.3:795827-795846 | None:intergenic | 25.0% |
| !! | TGTGTATCAATCTTTTTCTT+TGG | + | chr4.3:795598-795617 | MS.gene95877:intron | 25.0% |
| !!! | AACAGAAACATTGATTTTCT+TGG | - | chr4.3:795870-795889 | None:intergenic | 25.0% |
| !!! | ACAGAAACATTGATTTTCTT+GGG | - | chr4.3:795869-795888 | None:intergenic | 25.0% |
| !!! | TGAAGAAGTTTTATCAATCA+AGG | + | chr4.3:795636-795655 | MS.gene95877:CDS | 25.0% |
| AGTATACCTTAATCATGACA+TGG | - | chr4.3:795030-795049 | None:intergenic | 30.0% | |
| ATTACATCAATTTCCTTCCA+TGG | - | chr4.3:794863-794882 | None:intergenic | 30.0% | |
| ATTCACTGTAATCATATCAG+TGG | - | chr4.3:795195-795214 | None:intergenic | 30.0% | |
| GAAATTCACTTATCGTAACA+AGG | + | chr4.3:795223-795242 | MS.gene95877:CDS | 30.0% | |
| GAATTCAGATTGATTGCAAT+CGG | + | chr4.3:795404-795423 | MS.gene95877:intron | 30.0% | |
| GTATACCTTAATCATGACAT+GGG | - | chr4.3:795029-795048 | None:intergenic | 30.0% | |
| TATACCTTAATCATGACATG+GGG | - | chr4.3:795028-795047 | None:intergenic | 30.0% | |
| TATGATTATCGTGTAAACTC+GGG | - | chr4.3:795435-795454 | None:intergenic | 30.0% | |
| TATTTCCTTGCTTTCATTCT+TGG | + | chr4.3:794941-794960 | MS.gene95877:intron | 30.0% | |
| TCCTATTCAGAAATCGTAAT+TGG | + | chr4.3:795290-795309 | MS.gene95877:CDS | 30.0% | |
| TCTGAATAGGATAGATCTAA+AGG | - | chr4.3:795281-795300 | None:intergenic | 30.0% | |
| ! | TCTTTTCTCTCTTATCCTTT+GGG | + | chr4.3:794982-795001 | MS.gene95877:intron | 30.0% |
| !! | AGAAGTTTTATCAATCAAGG+AGG | + | chr4.3:795639-795658 | MS.gene95877:CDS | 30.0% |
| AAAAGCCAAGAATGAAAGCA+AGG | - | chr4.3:794949-794968 | None:intergenic | 35.0% | |
| ACAACAATCGATACACTGAT+TGG | + | chr4.3:795510-795529 | MS.gene95877:intron | 35.0% | |
| ATAGGATAGATCTAAAGGTG+TGG | - | chr4.3:795276-795295 | None:intergenic | 35.0% | |
| ATCAATTTCCTTCCATGGTT+TGG | - | chr4.3:794858-794877 | None:intergenic | 35.0% | |
| GAGAGAAAAGAGTGAACAAA+AGG | - | chr4.3:794973-794992 | None:intergenic | 35.0% | |
| GATAACAGGAGTAGAATGAA+AGG | - | chr4.3:794744-794763 | None:intergenic | 35.0% | |
| GCCAATTACGATTTCTGAAT+AGG | - | chr4.3:795294-795313 | None:intergenic | 35.0% | |
| ! | CTCTTTTCTCTCTTATCCTT+TGG | + | chr4.3:794981-795000 | MS.gene95877:intron | 35.0% |
| ! | CTTTTCTCTCTTATCCTTTG+GGG | + | chr4.3:794983-795002 | MS.gene95877:intron | 35.0% |
| !! | AAGCTCAATTTTAATGGCAC+TGG | - | chr4.3:795761-795780 | None:intergenic | 35.0% |
| !! | TTTAATGGCACTGGTAAAGT+TGG | - | chr4.3:795752-795771 | None:intergenic | 35.0% |
| !!! | AGTGGTTTTTTCACCATCAT+GGG | - | chr4.3:794717-794736 | None:intergenic | 35.0% |
| !!! | TAGTGGTTTTTTCACCATCA+TGG | - | chr4.3:794718-794737 | None:intergenic | 35.0% |
| AACAGGAGTAGAATGAAAGG+AGG | - | chr4.3:794741-794760 | None:intergenic | 40.0% | |
| AAGATCCCATTGTATGGAAG+TGG | + | chr4.3:795698-795717 | MS.gene95877:CDS | 40.0% | |
| AATCATGACATGGGGTTTCA+TGG | - | chr4.3:795020-795039 | None:intergenic | 40.0% | |
| ACTCCTGTTATCAGTCCAAT+GGG | + | chr4.3:794752-794771 | MS.gene95877:CDS | 40.0% | |
| AGCTTATGTGCTTGGGAAAT+TGG | + | chr4.3:795796-795815 | MS.gene95877:CDS | 40.0% | |
| AGTAGAATGAAAGGAGGTAG+TGG | - | chr4.3:794735-794754 | None:intergenic | 40.0% | |
| ATAGGTGCAAGACTTCTTGA+GGG | - | chr4.3:795894-795913 | None:intergenic | 40.0% | |
| ATCATGACATGGGGTTTCAT+GGG | - | chr4.3:795019-795038 | None:intergenic | 40.0% | |
| ATCATTCTCTTTCTCGTCGT+TGG | + | chr4.3:794918-794937 | MS.gene95877:intron | 40.0% | |
| GAAACCCCATGTCATGATTA+AGG | + | chr4.3:795021-795040 | MS.gene95877:intron | 40.0% | |
| GAGTCAAAGATTAGTGAGTG+TGG | + | chr4.3:795661-795680 | MS.gene95877:CDS | 40.0% | |
| GGACTTTGAACATAGTATGC+TGG | - | chr4.3:794692-794711 | None:intergenic | 40.0% | |
| GTCACTAGATCGAGATTGAA+TGG | + | chr4.3:795461-795480 | MS.gene95877:intron | 40.0% | |
| GTGTCAATGTTGTGTATGTC+TGG | + | chr4.3:795366-795385 | MS.gene95877:intron | 40.0% | |
| TACTCCTGTTATCAGTCCAA+TGG | + | chr4.3:794751-794770 | MS.gene95877:CDS | 40.0% | |
| TAGCACCACTTCCATACAAT+GGG | - | chr4.3:795706-795725 | None:intergenic | 40.0% | |
| TAGTAACACCAAACCATGGA+AGG | + | chr4.3:794847-794866 | MS.gene95877:CDS | 40.0% | |
| TCAGAAATCGTAATTGGCAC+TGG | + | chr4.3:795296-795315 | MS.gene95877:CDS | 40.0% | |
| ! | AGATCTAGAGCTTATGTGCT+TGG | + | chr4.3:795788-795807 | MS.gene95877:CDS | 40.0% |
| ! | GATCTAGAGCTTATGTGCTT+GGG | + | chr4.3:795789-795808 | MS.gene95877:CDS | 40.0% |
| ! | GGTTGTTGTTGTTGAGTTTC+CGG | - | chr4.3:794823-794842 | None:intergenic | 40.0% |
| ! | GTTGTTGTTGTTGAGTTTCC+GGG | - | chr4.3:794822-794841 | None:intergenic | 40.0% |
| !! | TCCATGGTTTGGTGTTACTA+CGG | - | chr4.3:794847-794866 | None:intergenic | 40.0% |
| !!! | CGTAACAAGGGCACATTTTT+TGG | + | chr4.3:795236-795255 | MS.gene95877:CDS | 40.0% |
| !!! | GTTTTTTCACCATCATGGGA+TGG | - | chr4.3:794713-794732 | None:intergenic | 40.0% |
| ACCGTAGTAACACCAAACCA+TGG | + | chr4.3:794843-794862 | MS.gene95877:CDS | 45.0% | |
| ATTAGTGAGTGTGGCAGTGA+TGG | + | chr4.3:795670-795689 | MS.gene95877:CDS | 45.0% | |
| CATAGGTGCAAGACTTCTTG+AGG | - | chr4.3:795895-795914 | None:intergenic | 45.0% | |
| CTAGAGGAAGAGTGAGAATG+AGG | - | chr4.3:794785-794804 | None:intergenic | 45.0% | |
| CTAGCACCACTTCCATACAA+TGG | - | chr4.3:795707-795726 | None:intergenic | 45.0% | |
| GAACCCATTGGACTGATAAC+AGG | - | chr4.3:794758-794777 | None:intergenic | 45.0% | |
| GAGCATGTTAGAGTTCAAGC+TGG | + | chr4.3:795149-795168 | MS.gene95877:CDS | 45.0% | |
| GCATACAAAGACAGACTCAG+AGG | + | chr4.3:794622-794641 | MS.gene95877:CDS | 45.0% | |
| GGAAGCAAGATCCCATTGTA+TGG | + | chr4.3:795692-795711 | MS.gene95877:CDS | 45.0% | |
| GTTCAAAGTCCATCCCATGA+TGG | + | chr4.3:794701-794720 | MS.gene95877:CDS | 45.0% | |
| TTAGTGAGTGTGGCAGTGAT+GGG | + | chr4.3:795671-795690 | MS.gene95877:CDS | 45.0% | |
| ! | TCAAGCTGGTTCAGATGCAA+CGG | + | chr4.3:795163-795182 | MS.gene95877:CDS | 45.0% |
| !! | ATGGTTTGGTGTTACTACGG+TGG | - | chr4.3:794844-794863 | None:intergenic | 45.0% |
| ACATAGTATGCTGGTCGACG+AGG | - | chr4.3:794683-794702 | None:intergenic | 50.0% | |
| GAATGAGGAGGAGAACCCAT+TGG | - | chr4.3:794770-794789 | None:intergenic | 50.0% | |
| GAGGAAGAGTGAGAATGAGG+AGG | - | chr4.3:794782-794801 | None:intergenic | 50.0% | |
| GTTTCCGGGAACCAGAGAAA+CGG | - | chr4.3:794808-794827 | None:intergenic | 50.0% | |
| TCGACGAGGAGATCTTGTTG+TGG | - | chr4.3:794669-794688 | None:intergenic | 50.0% | |
| TCTTCCTCTAGCCGTTTCTC+TGG | + | chr4.3:794794-794813 | MS.gene95877:CDS | 50.0% | |
| ! | CAAGCTGGTTCAGATGCAAC+GGG | + | chr4.3:795164-795183 | MS.gene95877:CDS | 50.0% |
| !! | GCTAGTCTTAGCAGCACAAC+TGG | + | chr4.3:795722-795741 | MS.gene95877:CDS | 50.0% |
| GGAACCAGAGAAACGGCTAG+AGG | - | chr4.3:794801-794820 | None:intergenic | 55.0% | |
| TGGTTCAGATGCAACGGGTG+TGG | + | chr4.3:795169-795188 | MS.gene95877:CDS | 55.0% | |
| ! | CTAGCCGTTTCTCTGGTTCC+CGG | + | chr4.3:794801-794820 | MS.gene95877:CDS | 55.0% |
| TGGGTCTGCTAGCACCCCAA+AGG | - | chr4.3:795000-795019 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 794620 | 795919 | 794620 | ID=MS.gene95877 |
| chr4.3 | mRNA | 794620 | 795919 | 794620 | ID=MS.gene95877.t1;Parent=MS.gene95877 |
| chr4.3 | exon | 794620 | 794877 | 794620 | ID=MS.gene95877.t1.exon1;Parent=MS.gene95877.t1 |
| chr4.3 | CDS | 794620 | 794877 | 794620 | ID=cds.MS.gene95877.t1;Parent=MS.gene95877.t1 |
| chr4.3 | exon | 795137 | 795322 | 795137 | ID=MS.gene95877.t1.exon2;Parent=MS.gene95877.t1 |
| chr4.3 | CDS | 795137 | 795322 | 795137 | ID=cds.MS.gene95877.t1;Parent=MS.gene95877.t1 |
| chr4.3 | exon | 795635 | 795919 | 795635 | ID=MS.gene95877.t1.exon3;Parent=MS.gene95877.t1 |
| chr4.3 | CDS | 795635 | 795919 | 795635 | ID=cds.MS.gene95877.t1;Parent=MS.gene95877.t1 |
| Gene Sequence |
| Protein sequence |
