AlfalfaGEDB | MS.gene059855

M. sativa cultivar XinJiangDaYe / MS.gene059855

KEGG: -
GO: -
PFAM: PF00571.31

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059855.t1	XP_013464731.1	89.6	385	39	1	1	384	1	385	2.80E-180	641.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059855.t1	Q84WQ5	51.1	393	176	7	1	382	1	388	1.4e-95	351.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059855.t1	A0A072VAY1	89.6	385	39	1	1	384	1	385	2.0e-180	641.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene059855	MS.gene061231	-0.814614	1.41E-51	-1.69E-46
MS.gene059855	MS.gene065181	0.917947	2.85E-86	-1.69E-46
MS.gene059855	MS.gene072376	0.813862	2.06E-51	-1.69E-46
MS.gene059855	MS.gene20856	-0.8151	1.10E-51	-1.69E-46
MS.gene059855	MS.gene20952	-0.810491	1.12E-50	-1.69E-46
MS.gene059855	MS.gene21094	-0.812385	4.35E-51	-1.69E-46
MS.gene059855	MS.gene21238	-0.804304	2.30E-49	-1.69E-46
MS.gene059855	MS.gene26817	-0.814857	1.24E-51	-1.69E-46
MS.gene059855	MS.gene28940	0.817059	4.01E-52	-1.69E-46
MS.gene059855	MS.gene55899	0.800833	1.20E-48	-1.69E-46
MS.gene059855	MS.gene58012	-0.805516	1.29E-49	-1.69E-46
MS.gene059855	MS.gene58060	-0.804905	1.73E-49	-1.69E-46
MS.gene059855	MS.gene58062	-0.812633	3.84E-51	-1.69E-46
MS.gene059855	MS.gene58282	-0.812369	4.39E-51	-1.69E-46
MS.gene059855	MS.gene61144	-0.802007	6.88E-49	-1.69E-46
MS.gene059855	MS.gene62631	0.846564	2.01E-59	-1.69E-46
MS.gene059855	MS.gene68597	-0.801316	9.54E-49	-1.69E-46
MS.gene059855	MS.gene71379	0.818739	1.68E-52	-1.69E-46
MS.gene059855	MS.gene71752	-0.819585	1.08E-52	-1.69E-46
MS.gene059855	MS.gene75654	0.801085	1.06E-48	-1.69E-46
MS.gene059855	MS.gene76419	-0.804152	2.48E-49	-1.69E-46
MS.gene059855	MS.gene88663	0.802642	5.09E-49	-1.69E-46
MS.gene059855	MS.gene95302	-0.806918	6.51E-50	-1.69E-46
MS.gene059855	MS.gene95877	0.803453	3.46E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059855.t1	MTR_2g079650	91.948	385	30	1	1	384	1	385	0.0	682
MS.gene059855.t1	MTR_2g079630	81.234	389	68	2	1	384	1	389	0.0	611
MS.gene059855.t1	MTR_2g013110	47.395	403	181	7	1	382	1	393	4.60e-115	341
MS.gene059855.t1	MTR_7g079680	28.979	421	227	13	1	374	1	396	2.08e-33	129
MS.gene059855.t1	MTR_7g079680	32.500	240	119	9	154	374	61	276	2.09e-21	94.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059855.t1	AT4G27460	52.284	394	170	9	1	382	1	388	2.40e-119	352
MS.gene059855.t1	AT5G53750	50.611	409	171	9	1	382	1	405	2.60e-117	347
MS.gene059855.t1	AT1G65320	27.635	427	228	13	1	374	1	399	9.22e-29	116

Find 87 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCAGCTTGAATCTTCTTCT+AGG	0.311891	2.2:+15592073	MS.gene059855:CDS
ACGAAACTTTCGTCAGTGTT+TGG	0.318070	2.2:+15591890	MS.gene059855:CDS
TTACTATTCCCCTGCGTCTT+CGG	0.340419	2.2:+15592604	MS.gene059855:CDS
TTCTAAAGCTCTTAAAGCTT+TGG	0.341556	2.2:+15592014	MS.gene059855:CDS
TAATCAATGGCGAGCACATC+GGG	0.342837	2.2:-15592584	None:intergenic
AAGGTTGAAGGAGAAGAATT+TGG	0.348572	2.2:+15592838	MS.gene059855:CDS
TTTGTCCGCAGGGGACTTGA+TGG	0.380969	2.2:+15592763	MS.gene059855:CDS
ACGTTGAAATAGACTTCAAC+GGG	0.384466	2.2:-15591825	None:intergenic
GACAGCAATCAAAGAGCTCT+TGG	0.386944	2.2:-15593023	None:intergenic
AGATAACTCATGTGTCAAAA+AGG	0.390942	2.2:-15591782	None:intergenic
AGGTTCTTGCTTGGTTCCAT+TGG	0.395496	2.2:+15592509	MS.gene059855:CDS
AAAGCTTTAAGAGCTTTAGA+AGG	0.397669	2.2:-15592012	None:intergenic
GAGGAGAGTCCGACGAGGTC+AGG	0.420723	2.2:+15592932	MS.gene059855:CDS
GAGGATGATTGCAGCTTAGT+TGG	0.425795	2.2:+15593091	MS.gene059855:CDS
CGCAAGGTCATCGAGCTATT+CGG	0.427267	2.2:+15592961	MS.gene059855:CDS
CTCATAGAGTGAACTACTTG+TGG	0.452341	2.2:+15593062	MS.gene059855:CDS
GATGATGTCAAGAGCATCAA+TGG	0.458076	2.2:-15592558	None:intergenic
TCATAGAGTGAACTACTTGT+GGG	0.462004	2.2:+15593063	MS.gene059855:CDS
AGCCATTGATCTTATACTCC+AGG	0.463049	2.2:+15592349	MS.gene059855:CDS
TTCTTTGACCGGTGATGTGT+TGG	0.469146	2.2:+15592892	MS.gene059855:CDS
TTCAGCACCATTGTGGTTGT+TGG	0.483724	2.2:-15592456	None:intergenic
GATGTGATCAGGTTCTTGCT+TGG	0.488754	2.2:+15592500	MS.gene059855:CDS
GAACTACTTGTGGGTTATTG+AGG	0.502090	2.2:+15593072	MS.gene059855:CDS
ACAAGTCTCACAAGATCCTC+TGG	0.503032	2.2:-15592809	None:intergenic
GACAGTGATGGGACATTCAT+CGG	0.505323	2.2:+15592680	MS.gene059855:CDS
AAGTTTCGTCGGAGCTTCTG+AGG	0.513062	2.2:-15591876	None:intergenic
TCCCTGGAGTATAAGATCAA+TGG	0.516231	2.2:-15592351	None:intergenic
ACTTGTAAAGGCAAGGTTGA+AGG	0.518293	2.2:+15592826	MS.gene059855:CDS
GCGATCACAACTTTGTCCGC+AGG	0.523015	2.2:+15592752	MS.gene059855:CDS
ACAGCAATCAAAGAGCTCTT+GGG	0.523505	2.2:-15593022	None:intergenic
CTTCAACAGCCGAAGACGCA+GGG	0.535193	2.2:-15592613	None:intergenic
GACTTCAATTGCCTCGGCAA+CGG	0.536075	2.2:-15591854	None:intergenic
TCTGAGGACTTCAATTGCCT+CGG	0.537513	2.2:-15591860	None:intergenic
TGCGGTCGTTGTCAATGTGT+TGG	0.538310	2.2:+15591931	MS.gene059855:CDS
TTGCAATTGTCGACAGTGAT+GGG	0.541246	2.2:+15592669	MS.gene059855:CDS
GTTGCAATTGTCGACAGTGA+TGG	0.542326	2.2:+15592668	MS.gene059855:CDS
CGCAGGGGAATAGTAATCAA+TGG	0.542783	2.2:-15592597	None:intergenic
GCTTCAACAGCCGAAGACGC+AGG	0.544746	2.2:-15592614	None:intergenic
TAACACAAGAGGATGTGATC+AGG	0.550433	2.2:+15592489	MS.gene059855:CDS
GCGGTCGTTGTCAATGTGTT+GGG	0.553823	2.2:+15591932	MS.gene059855:CDS
AACGTTGGCTACCGTTGCCG+AGG	0.562278	2.2:+15591843	MS.gene059855:CDS
TTGTGAGACTTGTAAAGGCA+AGG	0.564406	2.2:+15592819	MS.gene059855:CDS
ACAACAAGACCATCAACCTT+AGG	0.565226	2.2:-15592051	None:intergenic
TCACAACATGCAAGCGTGAA+AGG	0.565398	2.2:-15592713	None:intergenic
CGAGGTCAGGAAAGCACGCA+AGG	0.570009	2.2:+15592945	MS.gene059855:CDS
GCGTGCTTTCCTGACCTCGT+CGG	0.575337	2.2:-15592941	None:intergenic
GGATCTTGTGAGACTTGTAA+AGG	0.582402	2.2:+15592814	MS.gene059855:CDS
TTGTGCAAGCGACTTTGAGA+TGG	0.582874	2.2:-15592636	None:intergenic
GTTGAAGTCTATTTCAACGT+TGG	0.583473	2.2:+15591828	MS.gene059855:CDS
GTCGCTTGCACAACAAACTT+CGG	0.584024	2.2:+15592646	MS.gene059855:CDS
GCCATTGATCTTATACTCCA+GGG	0.586242	2.2:+15592350	MS.gene059855:CDS
GAGTGGAGTGAAGAGGCCAA+TGG	0.588041	2.2:-15592525	None:intergenic
GACAACGACCGCATTCAGAA+TGG	0.588165	2.2:-15591921	None:intergenic
GAGTTATCTGAACTCTGTCT+CGG	0.589665	2.2:+15591796	MS.gene059855:CDS
GTCTCACAAGATCCTCTGGT+GGG	0.595536	2.2:-15592805	None:intergenic
ATGCAGAGAGTGGAGTGAAG+AGG	0.601482	2.2:-15592532	None:intergenic
ATTCTGTTGGTTAACACAAG+AGG	0.602333	2.2:+15592478	MS.gene059855:CDS
CGATCACAACTTTGTCCGCA+GGG	0.602716	2.2:+15592753	MS.gene059855:CDS
AGACGAGGCCAACACATCAC+CGG	0.605949	2.2:-15592900	None:intergenic
TCAATGGAGTATGCAGAGAG+TGG	0.607007	2.2:-15592542	None:intergenic
TGGGTCACCACATTCAATGT+AGG	0.612788	2.2:-15592786	None:intergenic
AACACTGACGAAAGTTTCGT+CGG	0.613598	2.2:-15591887	None:intergenic
CGTCGGACTCTCCTCGTCAG+AGG	0.614308	2.2:-15592924	None:intergenic
AACAGAATTCAGCACCATTG+TGG	0.615037	2.2:-15592463	None:intergenic
AACGTTGAAATAGACTTCAA+CGG	0.620008	2.2:-15591826	None:intergenic
ATGTGTTGGGAAAGTTTGCA+TGG	0.628591	2.2:+15591945	MS.gene059855:CDS
GTAATCAATGGCGAGCACAT+CGG	0.628862	2.2:-15592585	None:intergenic
CTCCTCGTCAGAGGAAGACG+AGG	0.630235	2.2:-15592915	None:intergenic
TGCGGACAAAGTTGTGATCG+CGG	0.639568	2.2:-15592750	None:intergenic
ACAATGGTGCTGAATTCTGT+TGG	0.643018	2.2:+15592465	MS.gene059855:CDS
CCAGGGAGCACAAAATCTTG+TGG	0.643896	2.2:+15592367	MS.gene059855:CDS
TCAACAACCAACAACCACAA+TGG	0.661007	2.2:+15592449	MS.gene059855:CDS
AGTCTCACAAGATCCTCTGG+TGG	0.661172	2.2:-15592806	None:intergenic
TTCAACAGCCGAAGACGCAG+GGG	0.666030	2.2:-15592612	None:intergenic
AGCTGTGACCATTCTGAATG+CGG	0.668057	2.2:+15591913	MS.gene059855:CDS
GCTATTCGGCAAGATTTGTG+AGG	0.668957	2.2:+15592975	MS.gene059855:CDS
GGCCTCGTCTTCCTCTGACG+AGG	0.669844	2.2:+15592913	MS.gene059855:CDS
AAGATTTGTGAGGAATGTAG+AGG	0.675720	2.2:+15592985	MS.gene059855:CDS
GCTTGCATGTTGTGATGAGA+CGG	0.686166	2.2:+15592721	MS.gene059855:CDS
GTTGAAATAGACTTCAACGG+GGG	0.695337	2.2:-15591823	None:intergenic
TTGATGGCCTACATTGAATG+TGG	0.705015	2.2:+15592779	MS.gene059855:CDS
TGAATGTGGTGACCCACCAG+AGG	0.705333	2.2:+15592793	MS.gene059855:CDS
CTGACGAGGAGAGTCCGACG+AGG	0.740341	2.2:+15592927	MS.gene059855:CDS
GATCACAACTTTGTCCGCAG+GGG	0.750662	2.2:+15592754	MS.gene059855:CDS
AATCAATGGCGAGCACATCG+GGG	0.755270	2.2:-15592583	None:intergenic
GTAGGCCATCAAGTCCCCTG+CGG	0.766683	2.2:-15592768	None:intergenic
CGTTGAAATAGACTTCAACG+GGG	0.770457	2.2:-15591824	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GATTAAGAATTTTAATTAAT+TGG	+	chr2.2:15592168-15592187	MS.gene059855:intron	10.0%
!!!	TAAGAATTTTAATTAATTGG+TGG	+	chr2.2:15592171-15592190	MS.gene059855:intron	15.0%
!!!	TTTTAATTAATTGGTGGTAT+TGG	+	chr2.2:15592177-15592196	MS.gene059855:intron	20.0%
!	ACATCAAAATAACAAGAATG+AGG	-	chr2.2:15592315-15592334	None:intergenic	25.0%
!	CATCAAAATAACAAGAATGA+GGG	-	chr2.2:15592314-15592333	None:intergenic	25.0%
!!	TACGTTTTCTAATATCTTGA+AGG	+	chr2.2:15593120-15593139	MS.gene059855:CDS	25.0%
!!!	ATAATTTTGACTTCTTTGAC+CGG	+	chr2.2:15592881-15592900	MS.gene059855:CDS	25.0%
	AACGTTGAAATAGACTTCAA+CGG	-	chr2.2:15591829-15591848	None:intergenic	30.0%
	AGATAACTCATGTGTCAAAA+AGG	-	chr2.2:15591785-15591804	None:intergenic	30.0%
!	ATTTTGCAAACAAAAAGAGG+TGG	+	chr2.2:15592395-15592414	MS.gene059855:CDS	30.0%
!	CCAATTTTGCAAACAAAAAG+AGG	+	chr2.2:15592392-15592411	MS.gene059855:CDS	30.0%
!!	AAAGCTTTAAGAGCTTTAGA+AGG	-	chr2.2:15592015-15592034	None:intergenic	30.0%
!!	CCTCTTTTTGTTTGCAAAAT+TGG	-	chr2.2:15592395-15592414	None:intergenic	30.0%
!!	TTCTAAAGCTCTTAAAGCTT+TGG	+	chr2.2:15592014-15592033	MS.gene059855:CDS	30.0%
!!!	AAAGATTTTCTGGTTTGCAA+AGG	-	chr2.2:15591987-15592006	None:intergenic	30.0%
	AAGATTTGTGAGGAATGTAG+AGG	+	chr2.2:15592985-15593004	MS.gene059855:CDS	35.0%
	AAGGTTGAAGGAGAAGAATT+TGG	+	chr2.2:15592838-15592857	MS.gene059855:CDS	35.0%
	ACGTTGAAATAGACTTCAAC+GGG	-	chr2.2:15591828-15591847	None:intergenic	35.0%
	CAAAAAGAGGTGGTATTTCA+AGG	+	chr2.2:15592405-15592424	MS.gene059855:CDS	35.0%
	GTTGAAGTCTATTTCAACGT+TGG	+	chr2.2:15591828-15591847	MS.gene059855:CDS	35.0%
	TCATAGAGTGAACTACTTGT+GGG	+	chr2.2:15593063-15593082	MS.gene059855:CDS	35.0%
	TTCAGCTTGAATCTTCTTCT+AGG	+	chr2.2:15592073-15592092	MS.gene059855:CDS	35.0%
!	ATTCTGTTGGTTAACACAAG+AGG	+	chr2.2:15592478-15592497	MS.gene059855:CDS	35.0%
!	GAAGGACACAAAAGATTTTC+TGG	-	chr2.2:15591997-15592016	None:intergenic	35.0%
!!	ATTAATTGGTGGTATTGGCT+TGG	+	chr2.2:15592182-15592201	MS.gene059855:intron	35.0%
!!	TTAATTGGTGGTATTGGCTT+GGG	+	chr2.2:15592183-15592202	MS.gene059855:intron	35.0%
	AACACTGACGAAAGTTTCGT+CGG	-	chr2.2:15591890-15591909	None:intergenic	40.0%
	AACAGAATTCAGCACCATTG+TGG	-	chr2.2:15592466-15592485	None:intergenic	40.0%
	ACAACAAGACCATCAACCTT+AGG	-	chr2.2:15592054-15592073	None:intergenic	40.0%
	ACAGCAATCAAAGAGCTCTT+GGG	-	chr2.2:15593025-15593044	None:intergenic	40.0%
	ACGAAACTTTCGTCAGTGTT+TGG	+	chr2.2:15591890-15591909	MS.gene059855:CDS	40.0%
	ACTTGTAAAGGCAAGGTTGA+AGG	+	chr2.2:15592826-15592845	MS.gene059855:CDS	40.0%
	AGCCATTGATCTTATACTCC+AGG	+	chr2.2:15592349-15592368	MS.gene059855:CDS	40.0%
	ATGTGTTGGGAAAGTTTGCA+TGG	+	chr2.2:15591945-15591964	MS.gene059855:CDS	40.0%
	CGTTGAAATAGACTTCAACG+GGG	-	chr2.2:15591827-15591846	None:intergenic	40.0%
	CTCATAGAGTGAACTACTTG+TGG	+	chr2.2:15593062-15593081	MS.gene059855:CDS	40.0%
	GAGTTATCTGAACTCTGTCT+CGG	+	chr2.2:15591796-15591815	MS.gene059855:CDS	40.0%
	GCCATTGATCTTATACTCCA+GGG	+	chr2.2:15592350-15592369	MS.gene059855:CDS	40.0%
	GGATCTTGTGAGACTTGTAA+AGG	+	chr2.2:15592814-15592833	MS.gene059855:CDS	40.0%
	GTTGAAATAGACTTCAACGG+GGG	-	chr2.2:15591826-15591845	None:intergenic	40.0%
	TAACACAAGAGGATGTGATC+AGG	+	chr2.2:15592489-15592508	MS.gene059855:CDS	40.0%
	TCAACAACCAACAACCACAA+TGG	+	chr2.2:15592449-15592468	MS.gene059855:CDS	40.0%
	TCCCTGGAGTATAAGATCAA+TGG	-	chr2.2:15592354-15592373	None:intergenic	40.0%
	TTGCAATTGTCGACAGTGAT+GGG	+	chr2.2:15592669-15592688	MS.gene059855:CDS	40.0%
	TTGTGAGACTTGTAAAGGCA+AGG	+	chr2.2:15592819-15592838	MS.gene059855:CDS	40.0%
!	ACAATGGTGCTGAATTCTGT+TGG	+	chr2.2:15592465-15592484	MS.gene059855:CDS	40.0%
!	GAACTACTTGTGGGTTATTG+AGG	+	chr2.2:15593072-15593091	MS.gene059855:CDS	40.0%
!	TTGATGGCCTACATTGAATG+TGG	+	chr2.2:15592779-15592798	MS.gene059855:CDS	40.0%
!!	GATGATGTCAAGAGCATCAA+TGG	-	chr2.2:15592561-15592580	None:intergenic	40.0%
!!	GGTTTCTGTAGTTTTGCCTA+AGG	+	chr2.2:15592035-15592054	MS.gene059855:CDS	40.0%
!!	GTAGTTTTGCCTAAGGTTGA+TGG	+	chr2.2:15592042-15592061	MS.gene059855:CDS	40.0%
	ACAAGTCTCACAAGATCCTC+TGG	-	chr2.2:15592812-15592831	None:intergenic	45.0%
	AGCTGTGACCATTCTGAATG+CGG	+	chr2.2:15591913-15591932	MS.gene059855:CDS	45.0%
	AGGTTCTTGCTTGGTTCCAT+TGG	+	chr2.2:15592509-15592528	MS.gene059855:CDS	45.0%
	CGCAGGGGAATAGTAATCAA+TGG	-	chr2.2:15592600-15592619	None:intergenic	45.0%
	GACAGCAATCAAAGAGCTCT+TGG	-	chr2.2:15593026-15593045	None:intergenic	45.0%
	GAGGATGATTGCAGCTTAGT+TGG	+	chr2.2:15593091-15593110	MS.gene059855:CDS	45.0%
	GATGTGATCAGGTTCTTGCT+TGG	+	chr2.2:15592500-15592519	MS.gene059855:CDS	45.0%
	GCTATTCGGCAAGATTTGTG+AGG	+	chr2.2:15592975-15592994	MS.gene059855:CDS	45.0%
	GCTTGCATGTTGTGATGAGA+CGG	+	chr2.2:15592721-15592740	MS.gene059855:CDS	45.0%
	GTAATCAATGGCGAGCACAT+CGG	-	chr2.2:15592588-15592607	None:intergenic	45.0%
	GTCGCTTGCACAACAAACTT+CGG	+	chr2.2:15592646-15592665	MS.gene059855:CDS	45.0%
	GTTGCAATTGTCGACAGTGA+TGG	+	chr2.2:15592668-15592687	MS.gene059855:CDS	45.0%
	TAATCAATGGCGAGCACATC+GGG	-	chr2.2:15592587-15592606	None:intergenic	45.0%
	TCAATGGAGTATGCAGAGAG+TGG	-	chr2.2:15592545-15592564	None:intergenic	45.0%
	TCACAACATGCAAGCGTGAA+AGG	-	chr2.2:15592716-15592735	None:intergenic	45.0%
	TCTGAGGACTTCAATTGCCT+CGG	-	chr2.2:15591863-15591882	None:intergenic	45.0%
	TGGGTCACCACATTCAATGT+AGG	-	chr2.2:15592789-15592808	None:intergenic	45.0%
	TTACTATTCCCCTGCGTCTT+CGG	+	chr2.2:15592604-15592623	MS.gene059855:CDS	45.0%
	TTCAGCACCATTGTGGTTGT+TGG	-	chr2.2:15592459-15592478	None:intergenic	45.0%
	TTCTTTGACCGGTGATGTGT+TGG	+	chr2.2:15592892-15592911	MS.gene059855:CDS	45.0%
!	ATTCTCTCCGGTGCCAATTT+GGG	+	chr2.2:15592243-15592262	MS.gene059855:intron	45.0%
!	GACAGTGATGGGACATTCAT+CGG	+	chr2.2:15592680-15592699	MS.gene059855:CDS	45.0%
!	TTGTGCAAGCGACTTTGAGA+TGG	-	chr2.2:15592639-15592658	None:intergenic	45.0%
	AAGTTTCGTCGGAGCTTCTG+AGG	-	chr2.2:15591879-15591898	None:intergenic	50.0%
	AATCAATGGCGAGCACATCG+GGG	-	chr2.2:15592586-15592605	None:intergenic	50.0%
	AGTCTCACAAGATCCTCTGG+TGG	-	chr2.2:15592809-15592828	None:intergenic	50.0%
	ATGCAGAGAGTGGAGTGAAG+AGG	-	chr2.2:15592535-15592554	None:intergenic	50.0%
	CGATCACAACTTTGTCCGCA+GGG	+	chr2.2:15592753-15592772	MS.gene059855:CDS	50.0%
	CGCAAGGTCATCGAGCTATT+CGG	+	chr2.2:15592961-15592980	MS.gene059855:CDS	50.0%
	GAATCGAACCTGAGACCTTG+CGG	-	chr2.2:15592227-15592246	None:intergenic	50.0%
	GACAACGACCGCATTCAGAA+TGG	-	chr2.2:15591924-15591943	None:intergenic	50.0%
	GACTTCAATTGCCTCGGCAA+CGG	-	chr2.2:15591857-15591876	None:intergenic	50.0%
	GATCACAACTTTGTCCGCAG+GGG	+	chr2.2:15592754-15592773	MS.gene059855:CDS	50.0%
	GCGGTCGTTGTCAATGTGTT+GGG	+	chr2.2:15591932-15591951	MS.gene059855:CDS	50.0%
	GCTAGATAGCCCACCCAAAT+TGG	-	chr2.2:15592259-15592278	None:intergenic	50.0%
	GTCTCACAAGATCCTCTGGT+GGG	-	chr2.2:15592808-15592827	None:intergenic	50.0%
	GTCTCAGGTTCGATTCTCTC+CGG	+	chr2.2:15592231-15592250	MS.gene059855:intron	50.0%
	TGCGGACAAAGTTGTGATCG+CGG	-	chr2.2:15592753-15592772	None:intergenic	50.0%
	TGCGGTCGTTGTCAATGTGT+TGG	+	chr2.2:15591931-15591950	MS.gene059855:CDS	50.0%
!	CCACAAGATTTTGTGCTCCC+TGG	-	chr2.2:15592370-15592389	None:intergenic	50.0%
!	CCAGGGAGCACAAAATCTTG+TGG	+	chr2.2:15592367-15592386	MS.gene059855:CDS	50.0%
!	GATTCTCTCCGGTGCCAATT+TGG	+	chr2.2:15592242-15592261	MS.gene059855:intron	50.0%
!!	GTGGTATTGGCTTGGGTCTT+GGG	+	chr2.2:15592190-15592209	MS.gene059855:intron	50.0%
	AGACGAGGCCAACACATCAC+CGG	-	chr2.2:15592903-15592922	None:intergenic	55.0%
	CTTCAACAGCCGAAGACGCA+GGG	-	chr2.2:15592616-15592635	None:intergenic	55.0%
	GAGTGGAGTGAAGAGGCCAA+TGG	-	chr2.2:15592528-15592547	None:intergenic	55.0%
	GCGATCACAACTTTGTCCGC+AGG	+	chr2.2:15592752-15592771	MS.gene059855:CDS	55.0%
	TAGCCCACCCAAATTGGCAC+CGG	-	chr2.2:15592253-15592272	None:intergenic	55.0%
	TGAATGTGGTGACCCACCAG+AGG	+	chr2.2:15592793-15592812	MS.gene059855:CDS	55.0%
	TTCAACAGCCGAAGACGCAG+GGG	-	chr2.2:15592615-15592634	None:intergenic	55.0%
	TTTGTCCGCAGGGGACTTGA+TGG	+	chr2.2:15592763-15592782	MS.gene059855:CDS	55.0%
!	TCTCCGGTGCCAATTTGGGT+GGG	+	chr2.2:15592247-15592266	MS.gene059855:intron	55.0%
!!	GGTGGTATTGGCTTGGGTCT+TGG	+	chr2.2:15592189-15592208	MS.gene059855:intron	55.0%
	CTCCTCGTCAGAGGAAGACG+AGG	-	chr2.2:15592918-15592937	None:intergenic	60.0%
	GCGTGCTTTCCTGACCTCGT+CGG	-	chr2.2:15592944-15592963	None:intergenic	60.0%
	GCTTCAACAGCCGAAGACGC+AGG	-	chr2.2:15592617-15592636	None:intergenic	60.0%
	GTAGGCCATCAAGTCCCCTG+CGG	-	chr2.2:15592771-15592790	None:intergenic	60.0%
	TCGAACCTGAGACCTTGCGG+AGG	-	chr2.2:15592224-15592243	None:intergenic	60.0%
!	AACGTTGGCTACCGTTGCCG+AGG	+	chr2.2:15591843-15591862	MS.gene059855:CDS	60.0%
!	CGAGGTCAGGAAAGCACGCA+AGG	+	chr2.2:15592945-15592964	MS.gene059855:CDS	60.0%
!	CTCTCCGGTGCCAATTTGGG+TGG	+	chr2.2:15592246-15592265	MS.gene059855:intron	60.0%
	CGTCGGACTCTCCTCGTCAG+AGG	-	chr2.2:15592927-15592946	None:intergenic	65.0%
	CTGACGAGGAGAGTCCGACG+AGG	+	chr2.2:15592927-15592946	MS.gene059855:CDS	65.0%
	GAGGAGAGTCCGACGAGGTC+AGG	+	chr2.2:15592932-15592951	MS.gene059855:CDS	65.0%
	GGCCTCGTCTTCCTCTGACG+AGG	+	chr2.2:15592913-15592932	MS.gene059855:CDS	65.0%
	GTGCTCCTCCGCAAGGTCTC+AGG	+	chr2.2:15592216-15592235	MS.gene059855:intron	65.0%
!	TGGGAGTGTGCTCCTCCGCA+AGG	+	chr2.2:15592209-15592228	MS.gene059855:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.2	gene	15591772	15593171	15591772	ID=MS.gene059855
chr2.2	mRNA	15591772	15593171	15591772	ID=MS.gene059855.t1;Parent=MS.gene059855
chr2.2	exon	15591772	15592094	15591772	ID=MS.gene059855.t1.exon1;Parent=MS.gene059855.t1
chr2.2	CDS	15591772	15592094	15591772	ID=cds.MS.gene059855.t1;Parent=MS.gene059855.t1
chr2.2	exon	15592340	15593171	15592340	ID=MS.gene059855.t1.exon2;Parent=MS.gene059855.t1
chr2.2	CDS	15592340	15593171	15592340	ID=cds.MS.gene059855.t1;Parent=MS.gene059855.t1

Gene Sequence

>MS.gene059855

ATGGCAGTATCCTTTTTGACACATGAGTTATCTGAACTCTGTCTCGGTAAGCCCCCGTTGAAGTCTATTTCAACGTTGGCTACCGTTGCCGAGGCAATTGAAGTCCTCAGAAGCTCCGACGAAACTTTCGTCAGTGTTTGGAGCTGTGACCATTCTGAATGCGGTCGTTGTCAATGTGTTGGGAAAGTTTGCATGGTCGATGTTATTTGTTACCTTTGCAAACCAGAAAATCTTTTGTGTCCTTCTAAAGCTCTTAAAGCTTTGGTTTCTGTAGTTTTGCCTAAGGTTGATGGTCTTGTTGTTCAGCTTGAATCTTCTTCTAGGTACTTTTTTTATTTATCTAGAATTTATTGTTGAATCTTGAAATTATGTTTTAATGTGTTTTAGTATGATCAAGATTAAGAATTTTAATTAATTGGTGGTATTGGCTTGGGTCTTGGGAGTGTGCTCCTCCGCAAGGTCTCAGGTTCGATTCTCTCCGGTGCCAATTTGGGTGGGCTATCTAGCTTCTTCAAAAAAAAAGAATTTTAATTAATTAACCCTCATTCTTGTTATTTTGATGTTTCAGCTTATTAGAAGCCATTGATCTTATACTCCAGGGAGCACAAAATCTTGTGGTGCCAATTTTGCAAACAAAAAGAGGTGGTATTTCAAGGAGAAAACATCAACAAAAGTCATCAACAACCAACAACCACAATGGTGCTGAATTCTGTTGGTTAACACAAGAGGATGTGATCAGGTTCTTGCTTGGTTCCATTGGCCTCTTCACTCCACTCTCTGCATACTCCATTGATGCTCTTGACATCATCATCCCCGATGTGCTCGCCATTGATTACTATTCCCCTGCGTCTTCGGCTGTTGAAGCCATCTCAAAGTCGCTTGCACAACAAACTTCGGTTGCAATTGTCGACAGTGATGGGACATTCATCGGTGAGATATCGCCTTTCACGCTTGCATGTTGTGATGAGACGGTAGCTGCCGCGATCACAACTTTGTCCGCAGGGGACTTGATGGCCTACATTGAATGTGGTGACCCACCAGAGGATCTTGTGAGACTTGTAAAGGCAAGGTTGAAGGAGAAGAATTTGGAGAAATTGCTACAAGAGTTTATAATTTTGACTTCTTTGACCGGTGATGTGTTGGCCTCGTCTTCCTCTGACGAGGAGAGTCCGACGAGGTCAGGAAAGCACGCAAGGTCATCGAGCTATTCGGCAAGATTTGTGAGGAATGTAGAGGCTATAGTTTGTCATCCCAAGAGCTCTTTGATTGCTGTCATGATTCAAGCAGTTTCTCATAGAGTGAACTACTTGTGGGTTATTGAGGATGATTGCAGCTTAGTTGGTATTGTTACGTTTTCTAATATCTTGAAGGTGTTCAGAGAATGTTTAGAAGTTATTTAG

Protein sequence

>MS.gene059855.t1

MAVSFLTHELSELCLGKPPLKSISTLATVAEAIEVLRSSDETFVSVWSCDHSECGRCQCVGKVCMVDVICYLCKPENLLCPSKALKALVSVVLPKVDGLVVQLESSSSLLEAIDLILQGAQNLVVPILQTKRGGISRRKHQQKSSTTNNHNGAEFCWLTQEDVIRFLLGSIGLFTPLSAYSIDALDIIIPDVLAIDYYSPASSAVEAISKSLAQQTSVAIVDSDGTFIGEISPFTLACCDETVAAAITTLSAGDLMAYIECGDPPEDLVRLVKARLKEKNLEKLLQEFIILTSLTGDVLASSSSDEESPTRSGKHARSSSYSARFVRNVEAIVCHPKSSLIAVMIQAVSHRVNYLWVIEDDCSLVGIVTFSNILKVFRECLEVI