AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98031

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98031.t1 MTR_1g063110 95.108 511 25 0 1 511 1 511 0.0 971
MS.gene98031.t1 MTR_1g063120 77.027 518 109 2 1 511 1 515 0.0 793
MS.gene98031.t1 MTR_4g057730 57.285 501 205 8 13 511 12 505 0.0 566
MS.gene98031.t1 MTR_2g095510 54.709 499 218 7 13 511 12 502 0.0 543
MS.gene98031.t1 MTR_4g057730 57.173 467 191 8 13 477 12 471 0.0 521
MS.gene98031.t1 MTR_4g057730 55.605 446 189 8 13 456 12 450 3.26e-168 483
MS.gene98031.t1 MTR_2g095510 51.693 443 206 7 13 455 12 446 2.29e-157 456
MS.gene98031.t1 MTR_8g039720 43.053 511 271 8 13 511 24 526 1.03e-130 391
MS.gene98031.t1 MTR_1g026310 41.584 505 281 6 13 511 27 523 5.06e-129 387
MS.gene98031.t1 MTR_1g090737 41.212 495 277 10 21 511 45 529 1.42e-116 355
MS.gene98031.t1 MTR_5g027480 38.641 515 291 9 6 511 20 518 5.53e-116 353
MS.gene98031.t1 MTR_5g027500 37.692 520 305 7 4 511 19 531 7.88e-109 335
MS.gene98031.t1 MTR_1g073180 42.626 495 248 13 27 511 51 519 1.34e-108 333
MS.gene98031.t1 MTR_1g073180 42.626 495 248 13 27 511 29 497 3.22e-108 333
MS.gene98031.t1 MTR_5g007640 38.780 508 275 11 21 511 62 550 4.66e-108 334
MS.gene98031.t1 MTR_4g128337 39.960 498 282 10 20 511 25 511 5.77e-108 332
MS.gene98031.t1 MTR_2g105570 38.150 519 306 10 1 511 1 512 8.70e-107 329
MS.gene98031.t1 MTR_3g088870 40.159 503 257 14 24 511 48 521 1.88e-104 324
MS.gene98031.t1 MTR_4g077900 39.644 449 258 6 68 511 1 441 2.26e-104 321
MS.gene98031.t1 MTR_3g088880 39.754 488 264 12 32 511 54 519 4.61e-104 323
MS.gene98031.t1 MTR_4g005750 39.837 492 279 11 27 511 24 505 4.77e-104 322
MS.gene98031.t1 MTR_3g460770 33.728 507 321 9 6 509 8 502 1.85e-95 300
MS.gene98031.t1 MTR_1g026470 37.047 386 229 6 13 392 27 404 5.32e-73 237
MS.gene98031.t1 MTR_1g026430 36.815 383 228 6 13 389 27 401 4.74e-72 235
MS.gene98031.t1 MTR_3g035130 28.821 458 305 12 56 507 32 474 2.48e-42 158
MS.gene98031.t1 MTR_3g035130 29.120 443 293 12 56 492 32 459 2.89e-41 154
MS.gene98031.t1 MTR_0803s0020 28.235 510 323 13 13 504 219 703 5.31e-41 158
MS.gene98031.t1 MTR_3g064420 28.077 520 322 18 28 511 14 517 6.37e-41 155
MS.gene98031.t1 MTR_1569s0010 27.218 496 302 16 56 511 22 498 2.02e-38 147
MS.gene98031.t1 MTR_5g008820 27.898 509 322 17 28 511 14 502 9.24e-38 146
MS.gene98031.t1 MTR_2g030240 26.407 462 299 13 57 491 29 476 1.94e-34 136
MS.gene98031.t1 MTR_2g044180 26.735 490 317 14 51 508 41 520 3.96e-34 135
MS.gene98031.t1 MTR_4g121600 26.121 513 335 17 29 508 19 520 6.97e-34 135
MS.gene98031.t1 MTR_5g008800 27.470 506 328 13 30 511 14 504 9.11e-34 134
MS.gene98031.t1 MTR_2g044180 30.447 358 224 12 166 508 82 429 3.20e-33 132
MS.gene98031.t1 MTR_8g074040 27.200 500 301 15 28 491 56 528 6.87e-32 129
MS.gene98031.t1 MTR_4g011790 25.636 472 298 14 54 492 86 537 1.23e-30 125
MS.gene98031.t1 MTR_4g011790 25.636 472 298 14 54 492 86 537 1.33e-30 126
MS.gene98031.t1 MTR_1g104810 25.891 533 298 24 9 465 57 568 3.40e-30 125
MS.gene98031.t1 MTR_5g076220 26.863 510 316 14 28 504 14 499 3.86e-30 124
MS.gene98031.t1 MTR_1g104810 30.247 324 163 14 191 465 192 501 1.18e-29 123
MS.gene98031.t1 MTR_5g076240 27.096 513 306 17 16 491 6 487 3.16e-29 121
MS.gene98031.t1 MTR_4g057755 68.493 73 23 0 404 476 46 118 4.35e-28 108
MS.gene98031.t1 MTR_5g023730 25.296 506 343 15 28 511 16 508 5.84e-28 117
MS.gene98031.t1 MTR_4g011790 25.156 481 298 15 54 492 86 546 5.98e-28 118
MS.gene98031.t1 MTR_4g013210 28.440 327 207 11 184 492 63 380 8.37e-28 116
MS.gene98031.t1 MTR_4g013210 28.440 327 207 11 184 492 215 532 1.22e-27 117
MS.gene98031.t1 MTR_2g030240 25.895 363 233 11 151 491 34 382 6.58e-27 113
MS.gene98031.t1 MTR_8g074120 27.988 343 212 13 166 491 115 439 6.10e-26 111
MS.gene98031.t1 MTR_8g074040 26.402 428 258 13 98 491 6 410 2.10e-25 109
MS.gene98031.t1 MTR_1g026350 42.636 129 72 1 13 141 27 153 3.65e-25 102
MS.gene98031.t1 MTR_5g076200 26.214 515 313 15 28 504 14 499 9.79e-25 108
MS.gene98031.t1 MTR_8g099420 24.862 362 205 15 158 466 194 541 1.98e-24 107
MS.gene98031.t1 MTR_7g109830 27.763 389 221 15 161 502 194 569 4.49e-24 106
MS.gene98031.t1 MTR_5g009360 24.932 369 214 13 158 475 67 423 6.87e-24 105
MS.gene98031.t1 MTR_5g009350 24.796 367 207 14 158 470 193 544 1.59e-23 104
MS.gene98031.t1 MTR_5g009350 24.796 367 207 14 158 470 193 544 2.11e-23 103
MS.gene98031.t1 MTR_5g009360 24.932 369 214 13 158 475 193 549 2.19e-23 104
MS.gene98031.t1 MTR_5g009350 24.731 372 211 14 158 475 193 549 2.35e-23 104
MS.gene98031.t1 MTR_5g009350 24.731 372 211 14 158 475 193 549 2.66e-23 103
MS.gene98031.t1 MTR_0161s0050 24.710 518 339 14 28 511 14 514 9.16e-23 102
MS.gene98031.t1 MTR_4g013210 26.959 319 181 12 184 492 63 339 1.15e-22 100
MS.gene98031.t1 MTR_4g013210 26.959 319 181 12 184 492 215 491 1.26e-22 101
MS.gene98031.t1 MTR_1g086600 26.796 362 204 12 191 502 243 593 1.67e-22 101
MS.gene98031.t1 MTR_2g098490 26.954 371 220 13 188 511 643 1009 7.29e-22 100
MS.gene98031.t1 MTR_1g030290 27.628 409 214 20 154 497 216 607 9.90e-22 99.4
MS.gene98031.t1 MTR_1g034360 24.533 375 209 15 157 475 192 548 1.18e-21 99.0
MS.gene98031.t1 MTR_4g068670 23.046 499 291 21 49 475 69 546 1.12e-20 95.9
MS.gene98031.t1 MTR_4g066130 24.768 323 212 9 179 474 639 957 1.72e-20 96.3
MS.gene98031.t1 MTR_8g083170 33.679 193 103 5 316 497 460 638 3.13e-18 88.6
MS.gene98031.t1 MTR_4g013210 26.460 291 162 12 185 465 216 464 4.07e-17 84.3
MS.gene98031.t1 MTR_3g084470 30.964 197 111 5 316 501 453 635 1.12e-15 80.5
MS.gene98031.t1 MTR_3g088890 55.000 60 27 0 452 511 12 71 1.12e-15 72.8
MS.gene98031.t1 MTR_3g084450 30.978 184 108 5 316 488 249 424 2.06e-15 79.3
MS.gene98031.t1 MTR_3g084450 30.978 184 108 5 316 488 457 632 3.98e-15 78.6
MS.gene98031.t1 MTR_3g084450 26.460 291 169 12 37 297 86 361 5.29e-13 72.0
MS.gene98031.t1 MTR_1586s0010 23.116 398 275 14 28 405 40 426 1.71e-13 72.8
MS.gene98031.t1 MTR_4g013210 27.935 247 152 10 185 414 216 453 3.87e-13 72.0
MS.gene98031.t1 MTR_3g087980 29.480 173 103 7 311 472 419 583 9.53e-13 71.2
MS.gene98031.t1 MTR_3g082660 28.910 211 124 10 298 497 444 639 2.64e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98031.t1 AT4G05160 55.159 504 213 7 13 511 12 507 0.0 554
MS.gene98031.t1 AT1G20510 42.466 511 284 6 2 511 6 507 2.14e-137 408
MS.gene98031.t1 AT1G20480 42.004 519 277 11 3 511 24 528 1.38e-130 391
MS.gene98031.t1 AT1G20510 41.929 477 267 6 2 477 6 473 2.11e-124 372
MS.gene98031.t1 AT4G19010 40.078 514 287 11 6 511 25 525 1.38e-121 368
MS.gene98031.t1 AT1G20500 41.797 512 284 8 3 511 13 513 1.42e-119 362
MS.gene98031.t1 AT5G38120 40.426 517 283 11 3 511 14 513 5.33e-117 355
MS.gene98031.t1 AT5G38120 40.426 517 283 11 3 511 14 513 1.18e-116 355
MS.gene98031.t1 AT1G65060 39.516 496 286 8 20 511 42 527 3.33e-113 346
MS.gene98031.t1 AT1G20510 40.220 455 262 6 2 455 6 451 1.29e-110 337
MS.gene98031.t1 AT5G63380 38.964 521 287 12 6 511 17 521 1.29e-109 337
MS.gene98031.t1 AT5G38120 41.201 483 259 12 3 477 14 479 5.52e-106 325
MS.gene98031.t1 AT5G38120 41.201 483 259 12 3 477 14 479 5.52e-106 325
MS.gene98031.t1 AT3G21240 38.996 518 292 11 3 511 15 517 3.45e-104 323
MS.gene98031.t1 AT3G21230 39.243 502 280 11 26 511 39 531 2.84e-98 307
MS.gene98031.t1 AT3G21230 39.243 502 280 11 26 511 39 531 6.30e-98 307
MS.gene98031.t1 AT1G51680 38.477 499 285 11 26 511 35 524 8.20e-96 301
MS.gene98031.t1 AT1G51680 38.384 495 291 10 26 511 35 524 1.98e-95 300
MS.gene98031.t1 AT1G62940 35.366 492 306 8 21 509 19 501 8.49e-92 290
MS.gene98031.t1 AT3G21240 38.095 483 275 11 3 476 15 482 4.36e-91 287
MS.gene98031.t1 AT3G21240 38.095 483 275 11 3 476 15 482 4.36e-91 287
MS.gene98031.t1 AT1G65060 36.878 442 265 8 20 457 42 473 1.15e-88 281
MS.gene98031.t1 AT3G21230 38.758 467 261 11 26 476 39 496 1.05e-86 276
MS.gene98031.t1 AT1G51680 37.826 460 272 10 26 476 35 489 3.82e-83 266
MS.gene98031.t1 AT1G20490 38.928 429 242 10 3 424 13 428 3.28e-82 263
MS.gene98031.t1 AT1G20490 38.928 429 242 10 3 424 13 428 3.28e-82 263
MS.gene98031.t1 AT3G21230 35.013 397 233 11 26 406 39 426 1.26e-50 179
MS.gene98031.t1 AT3G48990 30.562 445 281 11 76 511 52 477 7.22e-44 162
MS.gene98031.t1 AT1G76290 29.867 452 287 15 57 491 41 479 2.72e-41 156
MS.gene98031.t1 AT1G30520 26.483 472 309 13 46 491 23 482 4.05e-38 147
MS.gene98031.t1 AT1G30520 26.483 472 309 13 46 491 23 482 4.05e-38 147
MS.gene98031.t1 AT1G65880 25.194 516 339 13 27 511 11 510 1.38e-37 146
MS.gene98031.t1 AT1G77240 27.613 507 324 17 28 507 14 504 1.48e-37 145
MS.gene98031.t1 AT1G65890 25.098 510 346 12 27 511 11 509 2.58e-37 145
MS.gene98031.t1 AT1G21530 27.168 519 323 19 28 511 14 512 4.44e-36 141
MS.gene98031.t1 AT1G21530 27.660 517 321 20 28 511 14 510 8.32e-36 140
MS.gene98031.t1 AT1G21540 27.344 512 324 17 28 507 14 509 1.83e-35 139
MS.gene98031.t1 AT1G66120 25.458 491 330 12 27 492 11 490 5.82e-34 135
MS.gene98031.t1 AT1G20560 25.344 509 333 13 28 507 16 506 3.96e-33 133
MS.gene98031.t1 AT1G30520 24.724 453 300 14 46 472 23 460 1.47e-30 124
MS.gene98031.t1 AT1G30520 24.724 453 300 14 46 472 23 460 1.47e-30 124
MS.gene98031.t1 AT1G68270 23.669 507 327 12 27 511 11 479 4.90e-29 120
MS.gene98031.t1 AT5G16340 26.070 514 335 17 26 511 12 508 5.46e-29 120
MS.gene98031.t1 AT5G16370 26.735 490 320 15 26 491 12 486 5.74e-29 120
MS.gene98031.t1 AT3G16170 25.434 519 306 18 35 506 72 556 1.25e-28 120
MS.gene98031.t1 AT3G16910 22.575 536 353 15 16 511 13 526 1.88e-28 119
MS.gene98031.t1 AT1G20560 26.776 366 237 10 158 508 80 429 1.79e-27 115
MS.gene98031.t1 AT1G75960 26.600 500 312 17 28 495 14 490 3.20e-27 115
MS.gene98031.t1 AT5G27600 24.665 523 313 20 9 463 60 569 4.79e-27 115
MS.gene98031.t1 AT2G17650 26.128 532 331 19 17 508 53 562 5.03e-27 115
MS.gene98031.t1 AT3G05970 29.595 321 165 13 191 463 262 569 2.56e-25 110
MS.gene98031.t1 AT2G47240 29.586 338 174 13 191 475 221 547 4.90e-25 109
MS.gene98031.t1 AT2G47240 29.586 338 174 13 191 475 221 547 4.90e-25 109
MS.gene98031.t1 AT2G47240 29.586 338 174 13 191 475 221 547 4.90e-25 109
MS.gene98031.t1 AT2G47240 29.586 338 174 13 191 475 162 488 5.08e-25 109
MS.gene98031.t1 AT4G11030 23.579 475 278 17 57 463 81 538 1.22e-24 108
MS.gene98031.t1 AT4G23850 23.899 477 274 19 57 463 81 538 4.49e-24 106
MS.gene98031.t1 AT1G64400 24.590 488 279 21 47 463 69 538 1.13e-23 105
MS.gene98031.t1 AT1G49430 26.772 381 187 15 189 496 222 583 1.60e-22 101
MS.gene98031.t1 AT5G36880 24.000 475 311 15 55 491 147 609 2.72e-22 101
MS.gene98031.t1 AT5G36880 24.000 475 311 15 55 491 147 609 2.72e-22 101
MS.gene98031.t1 AT5G36880 24.000 475 311 15 55 491 147 609 2.72e-22 101
MS.gene98031.t1 AT5G36880 24.000 475 311 15 55 491 147 609 2.72e-22 101
MS.gene98031.t1 AT5G36880 24.000 475 311 15 55 491 197 659 3.31e-22 100
MS.gene98031.t1 AT5G36880 23.913 460 300 15 55 476 147 594 3.43e-22 100
MS.gene98031.t1 AT3G23790 31.579 228 131 6 271 486 417 631 1.00e-18 90.1
MS.gene98031.t1 AT3G23790 27.586 232 129 7 14 216 68 289 7.14e-12 68.6
MS.gene98031.t1 AT1G77590 30.455 220 115 9 264 472 243 435 8.45e-15 77.4
MS.gene98031.t1 AT1G77590 30.455 220 115 9 264 472 389 581 1.03e-14 77.4
MS.gene98031.t1 AT4G14070 31.343 201 116 6 37 216 106 305 1.93e-14 76.6
MS.gene98031.t1 AT4G14070 31.319 182 106 5 316 486 474 647 4.23e-14 75.5
MS.gene98031.t1 AT2G04350 28.926 242 131 11 264 494 418 629 5.44e-12 68.9
MS.gene98031.t1 AT2G04350 28.926 242 131 11 264 494 418 629 5.44e-12 68.9

Find 0 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTTATATTTATTTTT+AGG - 10965:10351-10370 MS.gene98031:CDS 0.0%
!! TCATATTAATATTATATGAA+AGG - 10965:8490-8509 MS.gene98031:intron 10.0%
!!! AAGTTTTTATTTTGTATTTT+GGG - 10965:8887-8906 MS.gene98031:intron 10.0%
!!! ATTTTATACATAAATAAATC+AGG - 10965:10619-10638 MS.gene98031:CDS 10.0%
!!! CATGTATTTTTTTTTTTTTT+TGG + 10965:9809-9828 None:intergenic 10.0%
!!! TAAGTTTTTATTTTGTATTT+TGG - 10965:8886-8905 MS.gene98031:intron 10.0%
!! ATTAATAATGAAATGTGTAT+TGG + 10965:10747-10766 None:intergenic 15.0%
!! TAAGTAAGCATAATATTAAT+AGG - 10965:8038-8057 MS.gene98031:CDS 15.0%
!! TACACATTTCATTATTAATT+AGG - 10965:10748-10767 MS.gene98031:CDS 15.0%
!! TATCAAACATCTTATTATAT+TGG - 10965:10161-10180 MS.gene98031:CDS 15.0%
!! TATTAATATTATGCTTACTT+AGG + 10965:8039-8058 None:intergenic 15.0%
!!! AAAAGTTTGAGTTTTTATTA+GGG - 10965:9327-9346 MS.gene98031:intron 15.0%
!!! AAGTTTTTCAATTAATAACA+GGG - 10965:8544-8563 MS.gene98031:intron 15.0%
!!! ATTTTTACTAAGTAAAAAGT+TGG - 10965:8644-8663 MS.gene98031:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - 10965:9391-9410 MS.gene98031:intron 15.0%
!!! TAAGTTTTTCAATTAATAAC+AGG - 10965:8543-8562 MS.gene98031:intron 15.0%
!!! TTTAAAATAGAAATTAAACC+CGG + 10965:10067-10086 None:intergenic 15.0%
!! AAAAAAATACATGTTGTGTA+TGG - 10965:9816-9835 MS.gene98031:intron 20.0%
!! ATAGGTTCTTTAAATTTCTA+AGG + 10965:8367-8386 None:intergenic 20.0%
!! GAAAATAAAGCATGTTTATT+AGG + 10965:9680-9699 None:intergenic 20.0%
!! GTAACCAAAAAAAAAAAAAG+AGG + 10965:9704-9723 None:intergenic 20.0%
!! TAAAATTGAGACTAATAGAA+GGG - 10965:8854-8873 MS.gene98031:intron 20.0%
!! TTAAAATTGAGACTAATAGA+AGG - 10965:8853-8872 MS.gene98031:intron 20.0%
!! TTACTAATTAGCAGTTAAAA+CGG + 10965:10127-10146 None:intergenic 20.0%
!!! AAACTTTTGAATATCTTCTT+TGG + 10965:11023-11042 None:intergenic 20.0%
!!! AAATTTCTAAGGTTTTAGAT+AGG + 10965:8356-8375 None:intergenic 20.0%
!!! AAGCATTTAAAGAATGTTTT+AGG - 10965:9519-9538 MS.gene98031:intron 20.0%
!!! AGCATTTAAAGAATGTTTTA+GGG - 10965:9520-9539 MS.gene98031:intron 20.0%
!!! ATAAATCCTTTAAGTTTCTA+AGG + 10965:8427-8446 None:intergenic 20.0%
!!! GAAAAGTTTGAGTTTTTATT+AGG - 10965:9326-9345 MS.gene98031:intron 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG + 10965:9274-9293 None:intergenic 20.0%
!!! TATTTCTTTTAAAAACAAGG+TGG + 10965:10896-10915 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG + 10965:9275-9294 None:intergenic 20.0%
!!! TTCTCCTCTTTTTTTTTTTT+TGG - 10965:9697-9716 MS.gene98031:intron 20.0%
!!! TTTAAGTTTTGAGTTTGTTT+TGG - 10965:8138-8157 MS.gene98031:intron 20.0%
! AATTGAATCCTCTACAATTA+TGG + 10965:10577-10596 None:intergenic 25.0%
! AGAATCTCGTATAGTTAATT+TGG - 10965:9946-9965 MS.gene98031:intron 25.0%
! AGGATAACAAATTAACAATG+TGG - 10965:10639-10658 MS.gene98031:CDS 25.0%
! CTAAAACCTTAGAAACTTAA+AGG - 10965:8418-8437 MS.gene98031:intron 25.0%
! CTTAAAAGAACGAGATATAT+GGG + 10965:8986-9005 None:intergenic 25.0%
! GAAACAAACATGAAACTTAA+AGG - 10965:8449-8468 MS.gene98031:intron 25.0%
! GAAACAAATGTGAAACTTAA+AGG + 10965:8081-8100 None:intergenic 25.0%
! GAATATTAATGGTAAACCTA+AGG + 10965:7353-7372 None:intergenic 25.0%
! GTGCATTAAAATATGACTTA+CGG + 10965:10839-10858 None:intergenic 25.0%
! TCTTAAAAGAACGAGATATA+TGG + 10965:8987-9006 None:intergenic 25.0%
! TGACTGTTATATGAAAGATA+AGG - 10965:9606-9625 MS.gene98031:intron 25.0%
! TTCAAAAATATGTGAGATGT+GGG - 10965:9099-9118 MS.gene98031:intron 25.0%
! TTGAATATCTTCTTTGGTTA+TGG + 10965:11017-11036 None:intergenic 25.0%
!! AGTTTTTATTAGGGTAAAGT+TGG - 10965:9336-9355 MS.gene98031:intron 25.0%
!! CGCTTGTATTTATACATTTT+TGG + 10965:8604-8623 None:intergenic 25.0%
!! TTTTCAATTAATAACAGGGA+CGG - 10965:8548-8567 MS.gene98031:intron 25.0%
!!! AAACGACACTCATTTTAAAA+CGG + 10965:9183-9202 None:intergenic 25.0%
!!! AAGTTTCTAAGGTTTTAGAT+AGG + 10965:8416-8435 None:intergenic 25.0%
!!! CTTGGATATTTTGATGAAAA+GGG - 10965:10441-10460 MS.gene98031:CDS 25.0%
!!! TCGTTCTTTTAAGAAACAAA+TGG - 10965:8993-9012 MS.gene98031:intron 25.0%
!!! TCTTGGATATTTTGATGAAA+AGG - 10965:10440-10459 MS.gene98031:CDS 25.0%
!!! TTATTTTGTATTTTGGGTGT+GGG - 10965:8893-8912 MS.gene98031:intron 25.0%
!!! TTGGATATTTTGATGAAAAG+GGG - 10965:10442-10461 MS.gene98031:CDS 25.0%
!!! TTTAAGTTTCGAGTTTGTTT+CGG + 10965:8390-8409 None:intergenic 25.0%
!!! TTTATTTTGTATTTTGGGTG+TGG - 10965:8892-8911 MS.gene98031:intron 25.0%
ACACGTTTCCAAATTATACA+TGG + 10965:9023-9042 None:intergenic 30.0%
AGTAGTTTATTAATCAGGCA+CGG + 10965:9156-9175 None:intergenic 30.0%
ATCTATCTTGTAACAAATGG+GGG + 10965:9133-9152 None:intergenic 30.0%
ATGTATAATTTGGAAACGTG+TGG - 10965:9022-9041 MS.gene98031:intron 30.0%
CACGTTTCCAAATTATACAT+GGG + 10965:9022-9041 None:intergenic 30.0%
CTTCAAAAATATGTGAGATG+TGG - 10965:9098-9117 MS.gene98031:intron 30.0%
GAAACAAACTCGAAACTTAA+AGG - 10965:8389-8408 MS.gene98031:intron 30.0%
GATCTATCTTGTAACAAATG+GGG + 10965:9134-9153 None:intergenic 30.0%
GGATCTATCTTGTAACAAAT+GGG + 10965:9135-9154 None:intergenic 30.0%
GGTGAAGTAGTTTATTAATC+AGG + 10965:9161-9180 None:intergenic 30.0%
TACCTATTTGCATATCAGTA+TGG - 10965:9738-9757 MS.gene98031:intron 30.0%
TCAAAAATATGTGAGATGTG+GGG - 10965:9100-9119 MS.gene98031:intron 30.0%
TGTATAATTTGGAAACGTGT+GGG - 10965:9023-9042 MS.gene98031:intron 30.0%
TTCCTTAATATGTGTGCAAT+TGG + 10965:9209-9228 None:intergenic 30.0%
TTTCAATTAATAACAGGGAC+GGG - 10965:8549-8568 MS.gene98031:intron 30.0%
! ACATATCAGCTTTGGTTTAA+CGG + 10965:8208-8227 None:intergenic 30.0%
! AGATATATGGGTTATGAAAG+AGG + 10965:8974-8993 None:intergenic 30.0%
! GTCCAGAAATTTTGAATAGT+GGG - 10965:8571-8590 MS.gene98031:intron 30.0%
! TAACAACTTTGACTTAACAG+AGG + 10965:8182-8201 None:intergenic 30.0%
! TCCAGAAATTTTGAATAGTG+GGG - 10965:8572-8591 MS.gene98031:intron 30.0%
! TGATTTGGAGAAGATATTTG+CGG - 10965:7723-7742 MS.gene98031:intron 30.0%
!! AAAATTGAAGCATTGACCTT+AGG - 10965:7334-7353 MS.gene98031:intron 30.0%
!! AAGTGACACTCATTTTGAAA+TGG - 10965:9417-9436 MS.gene98031:intron 30.0%
!! TATTTTGTATTTTGGGTGTG+GGG - 10965:8894-8913 MS.gene98031:intron 30.0%
!! TTCTTTTAAAAACAAGGTGG+TGG + 10965:10893-10912 None:intergenic 30.0%
!!! AACGACACTCATTTTAAAAC+GGG + 10965:9182-9201 None:intergenic 30.0%
!!! AGTCTCAATTTTAAAGTGTC+TGG + 10965:8847-8866 None:intergenic 30.0%
!!! GTTTTGAGTTTGTTTTGGAT+TGG - 10965:8143-8162 MS.gene98031:intron 30.0%
!!! TACTAAGCGAGTTTTTTGTT+AGG + 10965:8712-8731 None:intergenic 30.0%
AAAGAGCTCATCAAATGTAG+TGG - 10965:10489-10508 MS.gene98031:CDS 35.0%
AAATACATGTTGTGTATGGC+AGG - 10965:9820-9839 MS.gene98031:intron 35.0%
AACATGAAACTTAAAGGACC+CGG - 10965:8455-8474 MS.gene98031:intron 35.0%
AAGCTGATATGTCTGTTAAG+TGG - 10965:8216-8235 MS.gene98031:intron 35.0%
AATACATGTTGTGTATGGCA+GGG - 10965:9821-9840 MS.gene98031:intron 35.0%
AATTCCCACCATAATTGTAG+AGG - 10965:10566-10585 MS.gene98031:CDS 35.0%
ACAAAACACTATTAGGTGTG+GGG - 10965:9047-9066 MS.gene98031:intron 35.0%
ACTATACGAGATTCTACACT+TGG + 10965:9941-9960 None:intergenic 35.0%
ACTATAGCTAGAAAGCAAAC+AGG + 10965:7199-7218 None:intergenic 35.0%
AGATACCGTTATAACAAGCT+TGG + 10965:7302-7321 None:intergenic 35.0%
AGCCAATTGCACACATATTA+AGG - 10965:9204-9223 MS.gene98031:intron 35.0%
AGCCATACTGATATGCAAAT+AGG + 10965:9743-9762 None:intergenic 35.0%
AGCTGATATGTCTGTTAAGT+GGG - 10965:8217-8236 MS.gene98031:intron 35.0%
ATGGCTTCCCATGTATAATT+TGG - 10965:9012-9031 MS.gene98031:intron 35.0%
CAAATTTCCCCCAATTGATT+CGG + 10965:9992-10011 None:intergenic 35.0%
CATCCAACCTTGATCATTAA+TGG + 10965:10409-10428 None:intergenic 35.0%
CCATATCAACTTTGCCTTAA+CGG - 10965:8283-8302 MS.gene98031:intron 35.0%
CGGATCTATCTTGTAACAAA+TGG + 10965:9136-9155 None:intergenic 35.0%
CTATAGCTAGAAAGCAAACA+GGG + 10965:7198-7217 None:intergenic 35.0%
CTTAACAGACATATCAGCTT+TGG + 10965:8216-8235 None:intergenic 35.0%
GAAACCTACTCGAAACTTAA+AGG - 10965:8329-8348 MS.gene98031:intron 35.0%
GAATCCTCTACAATTATGGT+GGG + 10965:10573-10592 None:intergenic 35.0%
GACAAAACACTATTAGGTGT+GGG - 10965:9046-9065 MS.gene98031:intron 35.0%
GATACCGTTATAACAAGCTT+GGG + 10965:7301-7320 None:intergenic 35.0%
GGATTGTCGAGGAATATTAA+TGG + 10965:7364-7383 None:intergenic 35.0%
GTATAATTTGGAAACGTGTG+GGG - 10965:9024-9043 MS.gene98031:intron 35.0%
GTCTTACCTTGCATTATAGT+AGG + 10965:10025-10044 None:intergenic 35.0%
TAAAGGATCGTGCAAGTATT+TGG + 10965:8064-8083 None:intergenic 35.0%
TATCAGTATGGCTTATGTGA+TGG - 10965:9750-9769 MS.gene98031:intron 35.0%
TATGTTCACCGGAATATCAT+CGG + 10965:7452-7471 None:intergenic 35.0%
TCTTTGGTTATGGAGCTATT+GGG + 10965:11007-11026 None:intergenic 35.0%
TGAATCCTCTACAATTATGG+TGG + 10965:10574-10593 None:intergenic 35.0%
TGTTTCCATCGAAAATCCAA+AGG - 10965:9871-9890 MS.gene98031:intron 35.0%
TTCTTTGGTTATGGAGCTAT+TGG + 10965:11008-11027 None:intergenic 35.0%
! CCAGAAATTTTGAATAGTGG+GGG - 10965:8573-8592 MS.gene98031:intron 35.0%
! GGGTTATGAAAGAGGTATAT+GGG + 10965:8966-8985 None:intergenic 35.0%
! GGTCCAGAAATTTTGAATAG+TGG - 10965:8570-8589 MS.gene98031:intron 35.0%
! TGGGTTATGAAAGAGGTATA+TGG + 10965:8967-8986 None:intergenic 35.0%
!! AAGGCAAAGTTGATATGGTT+GGG + 10965:8281-8300 None:intergenic 35.0%
!! AGGAATACGTCATTGTTTTG+AGG + 10965:6940-6959 None:intergenic 35.0%
!! TAAGGCAAAGTTGATATGGT+TGG + 10965:8282-8301 None:intergenic 35.0%
!! TTTCTAGCTATAGTAGCCAT+AGG - 10965:7205-7224 MS.gene98031:intron 35.0%
!!! CGTGTTCGTATATTTTAACC+GGG - 10965:10046-10065 MS.gene98031:CDS 35.0%
!!! GCGTGTTCGTATATTTTAAC+CGG - 10965:10045-10064 MS.gene98031:CDS 35.0%
AAGCTGGCCATTAATGATCA+AGG - 10965:10399-10418 MS.gene98031:CDS 40.0%
AATATGACCAAATACCTCCC+CGG + 10965:8477-8496 None:intergenic 40.0%
ACATGAAACTTAAAGGACCC+GGG - 10965:8456-8475 MS.gene98031:intron 40.0%
ATACATGTTGTGTATGGCAG+GGG - 10965:9822-9841 MS.gene98031:intron 40.0%
ATATGTCTGTTAAGTGGGTG+AGG - 10965:8222-8241 MS.gene98031:intron 40.0%
CAAAACACTATTAGGTGTGG+GGG - 10965:9048-9067 MS.gene98031:intron 40.0%
CAATAGCTCCGATGATATTC+CGG - 10965:7441-7460 MS.gene98031:intron 40.0%
CAGTTGAACCAGAAACTGAA+CGG + 10965:9907-9926 None:intergenic 40.0%
CCCCCACTATTCAAAATTTC+TGG + 10965:8576-8595 None:intergenic 40.0%
CGAATCAATTGGGGGAAATT+TGG - 10965:9990-10009 MS.gene98031:intron 40.0%
CTTTCTATCAACCTCCGTTA+AGG + 10965:8300-8319 None:intergenic 40.0%
GACAATCCTTCCAAGAAGTT+TGG - 10965:7376-7395 MS.gene98031:intron 40.0%
GATGGGTGGTAGATTTGATT+TGG - 10965:7708-7727 MS.gene98031:intron 40.0%
GGACAAAACACTATTAGGTG+TGG - 10965:9045-9064 MS.gene98031:intron 40.0%
TATCAACTTTGCCTTAACGG+AGG - 10965:8286-8305 MS.gene98031:intron 40.0%
TCACCGGAACTTAATAGCTA+CGG - 10965:7549-7568 MS.gene98031:CDS 40.0%
TCCATCGAAAATCCAAAGGA+AGG - 10965:9875-9894 MS.gene98031:intron 40.0%
TCTTTACTCTTCAGGCACAA+CGG - 10965:7501-7520 MS.gene98031:CDS 40.0%
TGAGACACATCTATGTTCAC+CGG + 10965:7463-7482 None:intergenic 40.0%
TGCATCAAATCTTTCCCCAA+CGG + 10965:7877-7896 None:intergenic 40.0%
TGCTAGGGTTTCAAACTATG+AGG - 10965:7399-7418 MS.gene98031:intron 40.0%
TGCTATACAAGCACATTCTC+TGG - 10965:10714-10733 MS.gene98031:CDS 40.0%
TGGCCATTAATGATCAAGGT+TGG - 10965:10403-10422 MS.gene98031:CDS 40.0%
TGTGGGGACAAAACACTATT+AGG - 10965:9040-9059 MS.gene98031:intron 40.0%
TTGTCTAGAGAGTTCAGAGA+GGG + 10965:7263-7282 None:intergenic 40.0%
TTTGGAGAAGATATTTGCGG+CGG - 10965:7726-7745 MS.gene98031:intron 40.0%
TTTGTCTAGAGAGTTCAGAG+AGG + 10965:7264-7283 None:intergenic 40.0%
! AAAGGGGCAACTATTTGTTG+TGG - 10965:10458-10477 MS.gene98031:CDS 40.0%
! AGGTCCTTTAAGTTTCGAGT+AGG + 10965:8336-8355 None:intergenic 40.0%
! AGTTCAGAGAGGGTGTATAA+AGG + 10965:7253-7272 None:intergenic 40.0%
! TCCTTCCTTTGGATTTTCGA+TGG + 10965:9879-9898 None:intergenic 40.0%
!! AGGCAAAGTTGATATGGTTG+GGG + 10965:8280-8299 None:intergenic 40.0%
!! CAAGCCCAAGCTTGTTATAA+CGG - 10965:7294-7313 MS.gene98031:intron 40.0%
!! CCGTTAAGGCAAAGTTGATA+TGG + 10965:8286-8305 None:intergenic 40.0%
!! CTTAACGGAGGTTGATAGAA+AGG - 10965:8298-8317 MS.gene98031:intron 40.0%
!! GTTTCGAGTTTGTTTCGGAT+AGG + 10965:8385-8404 None:intergenic 40.0%
!! TTCCAAGAAGTTTGGTGCTA+GGG - 10965:7384-7403 MS.gene98031:intron 40.0%
AACCCTAGCACCAAACTTCT+TGG + 10965:7389-7408 None:intergenic 45.0%
ACACAAGCTAATGCCTCACA+AGG + 10965:7987-8006 None:intergenic 45.0%
ACCACGTGATAAACGTTGCA+AGG - 10965:8012-8031 MS.gene98031:CDS 45.0%
ACCTTGCAACGTTTATCACG+TGG + 10965:8016-8035 None:intergenic 45.0%
ACTTCTTGGAAGGATTGTCG+AGG + 10965:7375-7394 None:intergenic 45.0%
ATATGACCAAATACCTCCCC+GGG + 10965:8476-8495 None:intergenic 45.0%
ATCCTGAGATTTCTGATGCC+GGG - 10965:10807-10826 MS.gene98031:CDS 45.0%
ATTGGAAGAGGAAGGAGGTT+AGG + 10965:7006-7025 None:intergenic 45.0%
CAACGTTTATCACGTGGTCA+CGG + 10965:8010-8029 None:intergenic 45.0%
CAATCCAGAAGCAACAAAGC+TGG - 10965:10383-10402 MS.gene98031:CDS 45.0%
CATCCTGAGATTTCTGATGC+CGG - 10965:10806-10825 MS.gene98031:CDS 45.0%
CATGAAACTTAAAGGACCCG+GGG - 10965:8457-8476 MS.gene98031:intron 45.0%
CGAGGACCTACTATAATGCA+AGG - 10965:10016-10035 MS.gene98031:intron 45.0%
CGTTATAACAAGCTTGGGCT+TGG + 10965:7296-7315 None:intergenic 45.0%
CTAGCACCAAACTTCTTGGA+AGG + 10965:7385-7404 None:intergenic 45.0%
CTTAACAGAGGTCGACAGAA+AGG + 10965:8170-8189 None:intergenic 45.0%
CTTTACTCTTCAGGCACAAC+GGG - 10965:7502-7521 MS.gene98031:CDS 45.0%
GATCAAGGTTGGATGAGTAC+AGG - 10965:10414-10433 MS.gene98031:CDS 45.0%
GCAGCGATTCTTTACTCTTC+AGG - 10965:7493-7512 MS.gene98031:CDS 45.0%
GGATAACGTACACACAGCTA+CGG - 10965:7665-7684 MS.gene98031:intron 45.0%
GGTGTATAAAGGACTACTGG+TGG + 10965:7242-7261 None:intergenic 45.0%
GTATAAAGGACTACTGGTGG+TGG + 10965:7239-7258 None:intergenic 45.0%
TATGACTTACGGTATCACCC+CGG + 10965:10828-10847 None:intergenic 45.0%
TATGGCATGACTGAAGCATG+TGG - 10965:9845-9864 MS.gene98031:intron 45.0%
TGGATGAGTACAGGAGATCT+TGG - 10965:10423-10442 MS.gene98031:CDS 45.0%
TTGAACCAGAAACTGAACGG+AGG + 10965:9904-9923 None:intergenic 45.0%
TTGGAAGAGGAAGGAGGTTA+GGG + 10965:7005-7024 None:intergenic 45.0%
! AAACCATTTGCAGCCTTGTG+AGG - 10965:7971-7990 MS.gene98031:CDS 45.0%
! ACAGGGAAGCGTATAGAGTT+AGG + 10965:7181-7200 None:intergenic 45.0%
! AGACATGGATTTTGAGCTGG+CGG + 10965:7093-7112 None:intergenic 45.0%
! GAGGGTGTATAAAGGACTAC+TGG + 10965:7245-7264 None:intergenic 45.0%
!! AACCTCGCCAACTTTAGGAT+CGG + 10965:10960-10979 None:intergenic 45.0%
!! ATTTCCCCCAATTGATTCGG+TGG + 10965:9989-10008 None:intergenic 45.0%
!! CGTTCAGTTTCTGGTTCAAC+TGG - 10965:9905-9924 MS.gene98031:intron 45.0%
!! CTTCCAAGAAGTTTGGTGCT+AGG - 10965:7383-7402 MS.gene98031:intron 45.0%
!! TTATATAATAATTCATATAA+AGG + 10965:9561-9580 None:intergenic 5.0%
!!! TATAATTTATATTTATTTTC+AGG - 10965:10265-10284 MS.gene98031:CDS 5.0%
AACAAGTCTTCGAGCTCAGC+TGG + 10965:10779-10798 None:intergenic 50.0%
AAGGAGGTTAGGGAGAGGTT+GGG + 10965:6995-7014 None:intergenic 50.0%
AAGTAAAGAGTGGGAGAGGG+CGG + 10965:7116-7135 None:intergenic 50.0%
ACCTGAATGACGTTGACACG+AGG + 10965:7919-7938 None:intergenic 50.0%
AGATCCCCCGATCCTAAAGT+TGG - 10965:10950-10969 MS.gene98031:CDS 50.0%
AGATGTGTCTCAATCCGACG+TGG - 10965:7471-7490 MS.gene98031:CDS 50.0%
AGCTGAGCTCGAAGACTTGT+TGG - 10965:10778-10797 MS.gene98031:CDS 50.0%
ATGCCTCACAAGGCTGCAAA+TGG + 10965:7977-7996 None:intergenic 50.0%
CCCCTTCCACCGAATCAATT+GGG - 10965:9980-9999 MS.gene98031:intron 50.0%
CCCTTCCACCGAATCAATTG+GGG - 10965:9981-10000 MS.gene98031:intron 50.0%
CCGCCGTAGCTATTAAGTTC+CGG + 10965:7555-7574 None:intergenic 50.0%
CCGGAACTTAATAGCTACGG+CGG - 10965:7552-7571 MS.gene98031:CDS 50.0%
CCTTCCACCGAATCAATTGG+GGG - 10965:9982-10001 MS.gene98031:intron 50.0%
GAACTTAATAGCTACGGCGG+TGG - 10965:7555-7574 MS.gene98031:CDS 50.0%
GAGCGAACAACAAAAGCCAC+CGG + 10965:10983-11002 None:intergenic 50.0%
GCATTTGTATGTTGCACCGC+CGG - 10965:7768-7787 MS.gene98031:intron 50.0%
GCGAAGTAAAGAGTGGGAGA+GGG + 10965:7119-7138 None:intergenic 50.0%
GTAAAGAATCGCTGCCACGT+CGG + 10965:7488-7507 None:intergenic 50.0%
TCCCACTCTTTACTTCGCCT+CGG - 10965:7121-7140 MS.gene98031:intron 50.0%
TCCGAGGCGAAGTAAAGAGT+GGG + 10965:7125-7144 None:intergenic 50.0%
TCCTAAAGTTGGCGAGGTTC+CGG - 10965:10961-10980 MS.gene98031:CDS 50.0%
TCCTCGTGTCAACGTCATTC+AGG - 10965:7915-7934 MS.gene98031:intron 50.0%
TCCTGAGATTTCTGATGCCG+GGG - 10965:10808-10827 MS.gene98031:CDS 50.0%
TGTCTGTTAAGTGGGTGAGG+TGG - 10965:8225-8244 MS.gene98031:intron 50.0%
TGTTGTGTATGGCAGGGGTA+TGG - 10965:9827-9846 MS.gene98031:intron 50.0%
TTCCGAGGCGAAGTAAAGAG+TGG + 10965:7126-7145 None:intergenic 50.0%
TTGATCAGCTCCACCATCAC+CGG + 10965:7790-7809 None:intergenic 50.0%
TTGGGGGAAATTTGGCTACG+AGG - 10965:9998-10017 MS.gene98031:intron 50.0%
TTTGAGCTGGCGGAAGGTAA+GGG + 10965:7083-7102 None:intergenic 50.0%
! ATGGATTTTGAGCTGGCGGA+AGG + 10965:7089-7108 None:intergenic 50.0%
! CGGAGACATGGATTTTGAGC+TGG + 10965:7096-7115 None:intergenic 50.0%
! GGATCAGTGGGAAGGTTGAT+GGG + 10965:6974-6993 None:intergenic 50.0%
! TCGTCGCTGAAGTATCTCGT+CGG - 10965:7841-7860 MS.gene98031:intron 50.0%
! TTTTGAGCTGGCGGAAGGTA+AGG + 10965:7084-7103 None:intergenic 50.0%
!! ACCTCGCCAACTTTAGGATC+GGG + 10965:10959-10978 None:intergenic 50.0%
!! AGTGGATTGGAAGAGGAAGG+AGG + 10965:7011-7030 None:intergenic 50.0%
!! ATGGCCAGCTTTGTTGCTTC+TGG + 10965:10390-10409 None:intergenic 50.0%
!! CCCAATTGATTCGGTGGAAG+GGG + 10965:9983-10002 None:intergenic 50.0%
!! CCCCAATTGATTCGGTGGAA+GGG + 10965:9984-10003 None:intergenic 50.0%
!! GGAAGGTTGATGGGTTGTCT+TGG + 10965:6965-6984 None:intergenic 50.0%
!! GGAAGTGGATTGGAAGAGGA+AGG + 10965:7014-7033 None:intergenic 50.0%
!! GTTGATGGGTTGTCTTGGTG+AGG + 10965:6960-6979 None:intergenic 50.0%
!! TGATGGTGGAGCTGATCAAG+CGG - 10965:7791-7810 MS.gene98031:intron 50.0%
AACCCCATCACGTGGTGCAT+TGG + 10965:7640-7659 None:intergenic 55.0%
AAGCGGCGTGAGGTTGTTAG+CGG - 10965:7808-7827 MS.gene98031:intron 55.0%
ACAGCTACGGAGAGGGAACA+CGG - 10965:7678-7697 MS.gene98031:intron 55.0%
ACCCCGGCATCAGAAATCTC+AGG + 10965:10812-10831 None:intergenic 55.0%
ACCGGAACCTCGCCAACTTT+AGG + 10965:10965-10984 None:intergenic 55.0%
ACGTACACACAGCTACGGAG+AGG - 10965:7670-7689 MS.gene98031:intron 55.0%
AGAGGAAGGAGGTTAGGGAG+AGG + 10965:7000-7019 None:intergenic 55.0%
AGAGGTTGGGATCAGTGGGA+AGG + 10965:6982-7001 None:intergenic 55.0%
AGGCACAACGGGAAGAAGCA+AGG - 10965:7513-7532 MS.gene98031:CDS 55.0%
AGGGAGAGGTTGGGATCAGT+GGG + 10965:6986-7005 None:intergenic 55.0%
CGTACACACAGCTACGGAGA+GGG - 10965:7671-7690 MS.gene98031:intron 55.0%
CTTAATAGCTACGGCGGTGG+CGG - 10965:7558-7577 MS.gene98031:CDS 55.0%
CTTCGCCTCGGAATCAAACG+AGG - 10965:7133-7152 MS.gene98031:intron 55.0%
GAAACTTAAAGGACCCGGGG+AGG - 10965:8460-8479 MS.gene98031:intron 55.0%
GAACGGAGGCTTCCTTCCTT+TGG + 10965:9890-9909 None:intergenic 55.0%
GAAGGAGGTTAGGGAGAGGT+TGG + 10965:6996-7015 None:intergenic 55.0%
GCAGTGGATCAGGACCAGAA+CGG - 10965:7583-7602 MS.gene98031:intron 55.0%
GCCCCTTCCACCGAATCAAT+TGG - 10965:9979-9998 MS.gene98031:intron 55.0%
GCGGAAGGTAAGGGATTCAC+CGG + 10965:7074-7093 None:intergenic 55.0%
GGAAGCCTCCGTTCAGTTTC+TGG - 10965:9896-9915 MS.gene98031:intron 55.0%
GGAGAAGATATTTGCGGCGG+TGG - 10965:7729-7748 MS.gene98031:intron 55.0%
GGATTCACCGGAGTGTGCAT+CGG + 10965:7062-7081 None:intergenic 55.0%
GGCACAACGGGAAGAAGCAA+GGG - 10965:7514-7533 MS.gene98031:CDS 55.0%
GGCGAAGTAAAGAGTGGGAG+AGG + 10965:7120-7139 None:intergenic 55.0%
GGGATCAGTGGGAAGGTTGA+TGG + 10965:6975-6994 None:intergenic 55.0%
GTGCCAATGCACCACGTGAT+GGG - 10965:7634-7653 MS.gene98031:intron 55.0%
TAAAGTTGGCGAGGTTCCGG+TGG - 10965:10964-10983 MS.gene98031:CDS 55.0%
TAGGGAGAGGTTGGGATCAG+TGG + 10965:6987-7006 None:intergenic 55.0%
TGCCAATGCACCACGTGATG+GGG - 10965:7635-7654 MS.gene98031:intron 55.0%
TGCGGCGGTGGTGAAGTTTA+AGG - 10965:7741-7760 MS.gene98031:intron 55.0%
TGTGCCAATGCACCACGTGA+TGG - 10965:7633-7652 MS.gene98031:intron 55.0%
TTAATAGCTACGGCGGTGGC+GGG - 10965:7559-7578 MS.gene98031:CDS 55.0%
TTGGGTGTGGGGTGTATGTG+TGG - 10965:8905-8924 MS.gene98031:intron 55.0%
! AATGCACCACGTGATGGGGT+TGG - 10965:7639-7658 MS.gene98031:intron 55.0%
! GGTGGTGGCAATAGCACCTA+TGG + 10965:7224-7243 None:intergenic 55.0%
! TCGCTGAAGTATCTCGTCGG+TGG - 10965:7844-7863 MS.gene98031:intron 55.0%
!! AAAGGACCCGGGGAGGTATT+TGG - 10965:8467-8486 MS.gene98031:intron 55.0%
!! AGGGAGTGATGCTGACTCAC+CGG - 10965:7533-7552 MS.gene98031:CDS 55.0%
!! CCCCCAATTGATTCGGTGGA+AGG + 10965:9985-10004 None:intergenic 55.0%
!! CCTCGCCAACTTTAGGATCG+GGG + 10965:10958-10977 None:intergenic 55.0%
!! CGGAGGAAGTGGATTGGAAG+AGG + 10965:7018-7037 None:intergenic 55.0%
!! CTCGCCAACTTTAGGATCGG+GGG + 10965:10957-10976 None:intergenic 55.0%
ATCAGCTCCACCATCACCGG+CGG + 10965:7787-7806 None:intergenic 60.0%
ATCAGGACCAGAACGGCGAG+GGG - 10965:7590-7609 MS.gene98031:intron 60.0%
CCCCGATCCTAAAGTTGGCG+AGG - 10965:10955-10974 MS.gene98031:CDS 60.0%
CCTCGCCTCGTTTGATTCCG+AGG + 10965:7141-7160 None:intergenic 60.0%
CCTCGGAATCAAACGAGGCG+AGG - 10965:7138-7157 MS.gene98031:CDS 60.0%
CGGAATCAAACGAGGCGAGG+TGG - 10965:7141-7160 MS.gene98031:CDS 60.0%
GATCAGGACCAGAACGGCGA+GGG - 10965:7589-7608 MS.gene98031:intron 60.0%
GTATGTTGCACCGCCGGTGA+TGG - 10965:7774-7793 MS.gene98031:intron 60.0%
! AGGGAACACGGTGGTGTCGA+TGG - 10965:7690-7709 MS.gene98031:intron 60.0%
! CACCACGTGATGGGGTTGGT+GGG - 10965:7643-7662 MS.gene98031:intron 60.0%
!! AACACGGTGGTGTCGATGGG+TGG - 10965:7694-7713 MS.gene98031:intron 60.0%
!! ACCACGTGATGGGGTTGGTG+GGG - 10965:7644-7663 MS.gene98031:intron 60.0%
!! GGGAACACGGTGGTGTCGAT+GGG - 10965:7691-7710 MS.gene98031:intron 60.0%
AGTGGGAGAGGGCGGAGACA+TGG + 10965:7108-7127 None:intergenic 65.0%
ATCGGCGAGGGCGATGGTGT+CGG + 10965:7044-7063 None:intergenic 65.0%
CGGCGACGGAGGAAGTGGAT+TGG + 10965:7024-7043 None:intergenic 65.0%
CGTTCTTCCCCTCGCCGTTC+TGG + 10965:7600-7619 None:intergenic 65.0%
GCTACGGAGAGGGAACACGG+TGG - 10965:7681-7700 MS.gene98031:intron 65.0%
GGAGCTGATCAAGCGGCGTG+AGG - 10965:7798-7817 MS.gene98031:intron 65.0%
GGATCAGGACCAGAACGGCG+AGG - 10965:7588-7607 MS.gene98031:intron 65.0%
TCCCCACCAACCCCATCACG+TGG + 10965:7648-7667 None:intergenic 65.0%
! ACCGGAGTGTGCATCGGCGA+GGG + 10965:7056-7075 None:intergenic 65.0%
! GCACCACGTGATGGGGTTGG+TGG - 10965:7642-7661 MS.gene98031:intron 65.0%
! TGTTGCACCGCCGGTGATGG+TGG - 10965:7777-7796 MS.gene98031:intron 65.0%
!! GTCGGTGGTGCTGCTCCGTT+GGG - 10965:7859-7878 MS.gene98031:intron 65.0%
!! TCGGTGGTGCTGCTCCGTTG+GGG - 10965:7860-7879 MS.gene98031:intron 65.0%
GCCCTCGCCGATGCACACTC+CGG - 10965:7052-7071 MS.gene98031:intron 70.0%
! CACCGGAGTGTGCATCGGCG+AGG + 10965:7057-7076 None:intergenic 70.0%
! GTGTGCATCGGCGAGGGCGA+TGG + 10965:7050-7069 None:intergenic 70.0%
!! CGTCGGTGGTGCTGCTCCGT+TGG - 10965:7858-7877 MS.gene98031:intron 70.0%
!! GAGGGCGATGGTGTCGGCGA+CGG + 10965:7038-7057 None:intergenic 70.0%
!! GGTGGCGGGTGCAGTGGATC+AGG - 10965:7573-7592 MS.gene98031:CDS 70.0%
!! GGTGTCGGCGACGGAGGAAG+TGG + 10965:7029-7048 None:intergenic 70.0%
!! GGCGATGGTGTCGGCGACGG+AGG + 10965:7035-7054 None:intergenic 75.0%
!! TACGGCGGTGGCGGGTGCAG+TGG - 10965:7567-7586 MS.gene98031:CDS 75.0%


Chromosome Type Strat End Strand Name
10965 gene 6917 11054 6917 ID=MS.gene98031
10965 mRNA 6917 11054 6917 ID=MS.gene98031.t1;Parent=MS.gene98031
10965 exon 10035 11054 10035 ID=MS.gene98031.t1.exon1;Parent=MS.gene98031.t1
10965 CDS 10035 11054 10035 ID=cds.MS.gene98031.t1;Parent=MS.gene98031.t1
10965 exon 7934 8129 7934 ID=MS.gene98031.t1.exon2;Parent=MS.gene98031.t1
10965 CDS 7934 8129 7934 ID=cds.MS.gene98031.t1;Parent=MS.gene98031.t1
10965 exon 7453 7598 7453 ID=MS.gene98031.t1.exon3;Parent=MS.gene98031.t1
10965 CDS 7453 7598 7453 ID=cds.MS.gene98031.t1;Parent=MS.gene98031.t1
10965 exon 7134 7201 7134 ID=MS.gene98031.t1.exon4;Parent=MS.gene98031.t1
10965 CDS 7134 7201 7134 ID=cds.MS.gene98031.t1;Parent=MS.gene98031.t1
10965 exon 6917 7019 6917 ID=MS.gene98031.t1.exon5;Parent=MS.gene98031.t1
10965 CDS 6917 7019 6917 ID=cds.MS.gene98031.t1;Parent=MS.gene98031.t1
Gene Sequence

>MS.gene98031

ATGGCGAAAAATTGCTTCAACCTCAAAACAATGACGTATTCCTCACCAAGACAACCCATCAACCTTCCCACTGATCCCAACCTCTCCCTAACCTCCTTCCTCTTCCAATCCACTTCCTCCGTCGCCGACACCATCGCCCTCGCCGATGCACACTCCGGTGAATCCCTTACCTTCCGCCAGCTCAAAATCCATGTCTCCGCCCTCTCCCACTCTTTACTTCGCCTCGGAATCAAACGAGGCGAGGTGGTTTTGCTATTAGCACCTAACTCTATACGCTTCCCTGTTTGCTTTCTAGCTATAGTAGCCATAGGTGCTATTGCCACCACCAGTAGTCCTTTATACACCCTCTCTGAACTCTCTAGACAAATACATGACTCCAAGCCCAAGCTTGTTATAACGGTATCTGAACTCTTCAAGAAAATTGAAGCATTGACCTTAGGTTTACCATTAATATTCCTCGACAATCCTTCCAAGAAGTTTGGTGCTAGGGTTTCAAACTATGAGGATCTGATCAGAGAGTCATACAATAGCTCCGATGATATTCCGGTGAACATAGATGTGTCTCAATCCGACGTGGCAGCGATTCTTTACTCTTCAGGCACAACGGGAAGAAGCAAGGGAGTGATGCTGACTCACCGGAACTTAATAGCTACGGCGGTGGCGGGTGCAGTGGATCAGGACCAGAACGGCGAGGGGAAGAACGTGTTTGTATGTTTTGTGCCAATGCACCACGTGATGGGGTTGGTGGGGATAACGTACACACAGCTACGGAGAGGGAACACGGTGGTGTCGATGGGTGGTAGATTTGATTTGGAGAAGATATTTGCGGCGGTGGTGAAGTTTAAGGTGACGCATTTGTATGTTGCACCGCCGGTGATGGTGGAGCTGATCAAGCGGCGTGAGGTTGTTAGCGGTTACGATTTGTCGTCGCTGAAGTATCTCGTCGGTGGTGCTGCTCCGTTGGGGAAAGATTTGATGCAAGAATGTATTAAGATTCTTCCTCGTGTCAACGTCATTCAGGTACAGTACATTATTAAAAAAAAGTAAATTTCTGAAACCATTTGCAGCCTTGTGAGGCATTAGCTTGTGTCCGTGACCACGTGATAAACGTTGCAAGGTCCTAAGTAAGCATAATATTAATAGGCCAAATACTTGCACGATCCTTTAAGTTTCACATTTGTTTCAGATAAGTTTTAAGATTTTAATGTTTTAGATAAGTCTTTTAAGTTTTGAGTTTGTTTTGGATTGGTCCTTTCTGTCGACCTCTGTTAAGTCAAAGTTGTTATGTCCGTTAAACCAAAGCTGATATGTCTGTTAAGTGGGTGAGGTGGTTCACTCTGACACTTGACATCAATTTTTTCCCCAACCATATCAACTTTGCCTTAACGGAGGTTGATAGAAAGGACATATCTGAAACCTACTCGAAACTTAAAGGACCTATCTAAAACCTTAGAAATTTAAAGAACCTATCCGAAACAAACTCGAAACTTAAAGGACCTATCTAAAACCTTAGAAACTTAAAGGATTTATCTGAAACAAACATGAAACTTAAAGGACCCGGGGAGGTATTTGGTCATATTAATATTATATGAAAGGTTTGTTAACTAACGAGTGTTTGCACTTTTGTAAGTTTTTCAATTAATAACAGGGACGGGTCCAGAAATTTTGAATAGTGGGGGCATGACCAAAAATGTATAAATACAAGCGATAAAATGACAATATTGATCATTTTTACTAAGTAAAAAGTTGGAGATTACAAAAATTGTAGCATAGAATATCTAAATATAAAGAGCCTAACAAAAAACTCGCTTAGTAAGTCATGAACATCTAAGAATTGTAAGTGTTTTGCATGTGTCTTTATTATATTTAAAAGAGTTGTAAGATTTTTATTTTAGTTTCAATACTATTAAATGCTCTATGTATGTAGCCAGACACTTTAAAATTGAGACTAATAGAAGGGAGTAAAGTTTAAGTTTTTATTTTGTATTTTGGGTGTGGGGTGTATGTGTGGATAAGTTGATTTTTATTACTATTTCATTTGCTGCACCCATATACCTCTTTCATAACCCATATATCTCGTTCTTTTAAGAAACAAATGGCTTCCCATGTATAATTTGGAAACGTGTGGGGACAAAACACTATTAGGTGTGGGGGCATAGCTTCAAAATATAAGATTAGTTGCTTCAAAAATATGTGAGATGTGGGGTCAGCTGCCCCCATTTGTTACAAGATAGATCCGTGCCTGATTAATAAACTACTTCACCCGTTTTAAAATGAGTGTCGTTTTAGCCAATTGCACACATATTAAGGAATAGAATGAAATAATCATTAGACATAACACTTTTACTAAACTGCCCTTACTTTATAAGAAAAAGACAAACTTAAAGTTGCATTGAAAATTGTGAGATAGAAAAGTTTGAGTTTTTATTAGGGTAAAGTTGGAAGAAGTTGTATTAGAAATGTAAAGTGACATTCATTTTGAAACAATTTTTTTTGGCTAAAGTGACACTCATTTTGAAATGGAGAGAGTATCATTGAAATCACATAATTTCTATTAGATTAAATGCATAAGTTTTTATAAAAACTTACTATATAAAGCATAAAGCATTTAAAGAATGTTTTAGGGTATTTCTTAACATTTCCTTTATATGAATTATTATATAATAAAATTTAATAAATTAAGTATATGTGACTGTTATATGAAAGATAAGGTCGTAGAGAGTGAATGTGTGAGAGAGTTGAGATCTTTATATTTTCAATCCTAATAAACATGCTTTATTTTCTCCTCTTTTTTTTTTTTTGGTTACTTTGTATAAAAAAATACCTATTTGCATATCAGTATGGCTTATGTGATGGATTGTAATATATAAATACATGTTGTGTATGTAACCAAAAAAAAAAAAAAATACATGTTGTGTATGGCAGGGGTATGGCATGACTGAAGCATGTGGACTTGTTTCCATCGAAAATCCAAAGGAAGGAAGCCTCCGTTCAGTTTCTGGTTCAACTGGAACACTAATTCCAAGTGTAGAATCTCGTATAGTTAATTTGGCAACATTGAAGCCCCTTCCACCGAATCAATTGGGGGAAATTTGGCTACGAGGACCTACTATAATGCAAGGTAAGACGCGTGTTCGTATATTTTAACCGGGTTTAATTTCTATTTTAAACTTCTTAACATGTGTAAATTTGCATATGATAGAAAAACCGTTTTAACTGCTAATTAGTAATTACATGATAAATTTATCAAACATCTTATTATATTGGTTAATCAACAAATTGATTTGAGTGTCATGTCTATTGCTTCTCTAGTTTGCATTAAACTTCAATTGATTCTAATTAGAATTTTATAATTTATATTTATTTTCAGGATACTTTAACGTCTATTGCTTCTCTAGTTTGCATTAAACTTAAATTGATTCTAATTAGAATTTTATAATTTATATTTATTTTTAGGATACTTTAACAATCCAGAAGCAACAAAGCTGGCCATTAATGATCAAGGTTGGATGAGTACAGGAGATCTTGGATATTTTGATGAAAAGGGGCAACTATTTGTTGTGGATCGAATAAAAGAGCTCATCAAATGTAGTGGTTATCAAGTATGTTGATCATCAACTTAGTGAAGTCTTTTATAAAATAAATTAAAAATTCCCACCATAATTGTAGAGGATTCAATTTTGCTATCATGCAACATCATTGATTTTATACATAAATAAATCAGGATAACAAATTAACAATGTGGACAATCACTTGTAGAAAATATTAGAGTTCATATTATATTAGCAAATTTAGCATGCTATACAAGCACATTCTCTGGTGCTAATCCAATACACATTTCATTATTAATTAGGTCGCGCCAGCTGAGCTCGAAGACTTGTTGGTTTCTCATCCTGAGATTTCTGATGCCGGGGTGATACCGTAAGTCATATTTTAATGCACAATTTCATTTTATTACATTTACACTATTTTACCACCACCTTGTTTTTAAAAGAAATAATGACTCATCAGAACTTTGTGACAATTCTAAATCAGATCCCCCGATCCTAAAGTTGGCGAGGTTCCGGTGGCTTTTGTTGTTCGCTCGCCCAATAGCTCCATAACCAAAGAAGATATTCAAAAGTTTGTAGCAAAACAG
Protein sequence

>MS.gene98031.t1

MAKNCFNLKTMTYSSPRQPINLPTDPNLSLTSFLFQSTSSVADTIALADAHSGESLTFRQLKIHVSALSHSLLRLGIKRGEVVLLLAPNSIRFPVCFLAIVAIGAIATTSSPLYTLSELSRQIHDSKPKLVITVSELFKKIEALTLGLPLIFLDNPSKKFGARVSNYEDLIRESYNSSDDIPVNIDVSQSDVAAILYSSGTTGRSKGVMLTHRNLIATAVAGAVDQDQNGEGKNVFVCFVPMHHVMGLVGITYTQLRRGNTVVSMGGRFDLEKIFAAVVKFKVTHLYVAPPVMVELIKRREVVSGYDLSSLKYLVGGAAPLGKDLMQECIKILPRVNVIQGYGMTEACGLVSIENPKEGSLRSVSGSTGTLIPSVESRIVNLATLKPLPPNQLGEIWLRGPTIMQGYFNNPEATKLAINDQGWMSTGDLGYFDEKGQLFVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSPDPKVGEVPVAFVVRSPNSSITKEDIQKFVAKQ