Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98661.t1 | XP_003618310.2 | 96.9 | 417 | 12 | 1 | 1 | 416 | 25 | 441 | 1.70E-239 | 838.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98661.t1 | Q8VZQ6 | 67.9 | 417 | 121 | 3 | 1 | 416 | 1 | 405 | 3.9e-168 | 592.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98661.t1 | G7KIT8 | 96.9 | 417 | 12 | 1 | 1 | 416 | 25 | 441 | 1.2e-239 | 838.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98661 | MS.gene79098 | PPI |
| MS.gene031394 | MS.gene98661 | PPI |
| MS.gene98661 | MS.gene059857 | PPI |
| MS.gene065179 | MS.gene98661 | PPI |
| MS.gene98661 | MS.gene069370 | PPI |
| MS.gene98661 | MS.gene75502 | PPI |
| MS.gene045143 | MS.gene98661 | PPI |
| MS.gene98661 | MS.gene84700 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98661.t1 | MTR_6g007490 | 96.882 | 417 | 12 | 1 | 1 | 416 | 25 | 441 | 0.0 | 840 |
| MS.gene98661.t1 | MTR_6g007490 | 96.417 | 307 | 10 | 1 | 1 | 306 | 25 | 331 | 0.0 | 620 |
| MS.gene98661.t1 | MTR_2g079700 | 65.228 | 417 | 144 | 1 | 1 | 416 | 1 | 417 | 0.0 | 576 |
| MS.gene98661.t1 | MTR_3g086910 | 47.692 | 390 | 183 | 7 | 42 | 416 | 32 | 415 | 1.39e-115 | 344 |
| MS.gene98661.t1 | MTR_3g086910 | 45.878 | 279 | 131 | 6 | 42 | 306 | 32 | 304 | 5.44e-73 | 231 |
| MS.gene98661.t1 | MTR_0040s0150 | 93.478 | 46 | 3 | 0 | 6 | 51 | 35 | 80 | 1.37e-24 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98661.t1 | AT2G20770 | 67.866 | 417 | 121 | 3 | 1 | 416 | 1 | 405 | 0.0 | 590 |
| MS.gene98661.t1 | AT1G52920 | 65.144 | 416 | 139 | 1 | 1 | 416 | 1 | 410 | 0.0 | 567 |
| MS.gene98661.t1 | AT5G65280 | 46.154 | 403 | 190 | 9 | 40 | 416 | 32 | 433 | 1.39e-115 | 345 |
| MS.gene98661.t1 | AT5G65280 | 47.910 | 311 | 147 | 5 | 120 | 416 | 2 | 311 | 4.41e-97 | 293 |
Find 113 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTATACTGTGGTCTTCT+TGG | 0.232763 | 4.4:-59253265 | MS.gene98661:CDS |
| TATGAATGTTCTTATGGATA+TGG | 0.244336 | 4.4:-59250705 | MS.gene98661:CDS |
| ATGCTGCTTCTCTTTCTTCC+AGG | 0.260657 | 4.4:-59253156 | MS.gene98661:intron |
| GGTGCTGCGCATGGTTTGGC+TGG | 0.265944 | 4.4:-59250731 | MS.gene98661:CDS |
| CTGATGAGCTTGAGGATGTT+AGG | 0.277367 | 4.4:-59250673 | MS.gene98661:CDS |
| TTGTGACGGTGACTGCTTCT+TGG | 0.292863 | 4.4:+59253522 | None:intergenic |
| TGGGATTATGAATGTTCTTA+TGG | 0.319356 | 4.4:-59250711 | MS.gene98661:CDS |
| CGTGCTGGTGTTTGTGCTCT+TGG | 0.319982 | 4.4:-59252414 | MS.gene98661:CDS |
| CTTCCTGATGAGTTGCTATA+CGG | 0.322083 | 4.4:-59251040 | MS.gene98661:CDS |
| TGCTGATTCGGGTATGAATT+CGG | 0.322944 | 4.4:+59253565 | None:intergenic |
| CACTGGTGCCATGGAGCTCC+TGG | 0.325907 | 4.4:-59250566 | MS.gene98661:CDS |
| CTGTCACTTTACCAACTTAC+CGG | 0.336129 | 4.4:-59249888 | MS.gene98661:CDS |
| GAACAGACTCACAGTATAAC+TGG | 0.345911 | 4.4:+59250952 | None:intergenic |
| TGGAGTTCCTGTTGGGTTGA+AGG | 0.353026 | 4.4:+59253542 | None:intergenic |
| ATGAATTCGGGCATGGGATT+GGG | 0.361724 | 4.4:+59253578 | None:intergenic |
| TGCTTCTTGGAGTTCCTGTT+GGG | 0.363023 | 4.4:+59253535 | None:intergenic |
| ATGGAAACATGGGGTTTAAC+TGG | 0.363392 | 4.4:-59253307 | MS.gene98661:CDS |
| CTGCTTCTTGGAGTTCCTGT+TGG | 0.363703 | 4.4:+59253534 | None:intergenic |
| TATGAATTCGGGCATGGGAT+TGG | 0.378818 | 4.4:+59253577 | None:intergenic |
| TTGGGTTGAAGGTGCTGATT+CGG | 0.381397 | 4.4:+59253553 | None:intergenic |
| CTTAAACAAGCACCTTGGTC+AGG | 0.388780 | 4.4:-59250987 | MS.gene98661:CDS |
| AGAGCTCATAATCTGATATC+TGG | 0.389620 | 4.4:-59249813 | MS.gene98661:CDS |
| CTAACATCCTCAAGCTCATC+AGG | 0.402562 | 4.4:+59250674 | None:intergenic |
| GTATAAATACTTCGTGTTCC+CGG | 0.412099 | 4.4:+59249869 | None:intergenic |
| TGGAAGCAGGAGAGGTGGTT+TGG | 0.412671 | 4.4:-59249974 | MS.gene98661:CDS |
| AGTGGTACGGAGAGAAGTAT+TGG | 0.422897 | 4.4:-59250754 | MS.gene98661:CDS |
| GCTGATTCGGGTATGAATTC+GGG | 0.425367 | 4.4:+59253566 | None:intergenic |
| GTGGTACGGAGAGAAGTATT+GGG | 0.428107 | 4.4:-59250753 | MS.gene98661:CDS |
| ATAAAGAATGGTAGGGCATT+GGG | 0.433708 | 4.4:-59250806 | MS.gene98661:CDS |
| TGGGTTGAAGGTGCTGATTC+GGG | 0.436091 | 4.4:+59253554 | None:intergenic |
| TTGGGGTGCTGCGCATGGTT+TGG | 0.443842 | 4.4:-59250735 | MS.gene98661:CDS |
| GTGCTGCGCATGGTTTGGCT+GGG | 0.445559 | 4.4:-59250730 | MS.gene98661:CDS |
| AGAGCAAAGTGTTAAATCAT+TGG | 0.445589 | 4.4:+59253198 | None:intergenic |
| GAAGCAGTCACCGTCACAAC+GGG | 0.452280 | 4.4:-59253518 | MS.gene98661:CDS |
| TGATGAGCTTGAGGATGTTA+GGG | 0.452334 | 4.4:-59250672 | MS.gene98661:CDS |
| ATCAGCACCTTCAACCCAAC+AGG | 0.463280 | 4.4:-59253549 | MS.gene98661:CDS |
| AATAGGGTACAGTTTCTTTG+AGG | 0.466133 | 4.4:+59253420 | None:intergenic |
| GAGGCATGGCGAGGAGGTTG+AGG | 0.470761 | 4.4:+59253483 | None:intergenic |
| GGGATTTGCCATGGTATTAG+TGG | 0.471806 | 4.4:-59249927 | MS.gene98661:CDS |
| ACAAGTGTAAGAGCCATTCC+AGG | 0.473462 | 4.4:+59250548 | None:intergenic |
| AGAATTCTTGGATGCAGCTA+TGG | 0.482838 | 4.4:-59249994 | MS.gene98661:CDS |
| TATAAAGAATGGTAGGGCAT+TGG | 0.483268 | 4.4:-59250807 | MS.gene98661:CDS |
| CTACTTGGCTCAGTTCCAAC+AGG | 0.485928 | 4.4:-59252346 | MS.gene98661:intron |
| AACTCATCAGGAAGATCCTT+CGG | 0.492272 | 4.4:+59251049 | None:intergenic |
| CGGTAAGTTGGTAAAGTGAC+AGG | 0.492495 | 4.4:+59249889 | None:intergenic |
| GTGCCATGGAGCTCCTGGAA+TGG | 0.496830 | 4.4:-59250561 | MS.gene98661:CDS |
| TATTCTCATAGTTCATAAGC+AGG | 0.498619 | 4.4:+59249687 | None:intergenic |
| ATGAGATTATAAAGAATGGT+AGG | 0.498888 | 4.4:-59250814 | MS.gene98661:CDS |
| ACTTCGTGTTCCCGGTAAGT+TGG | 0.500841 | 4.4:+59249877 | None:intergenic |
| CTGAGCCAAGTAGTATTTCA+AGG | 0.507661 | 4.4:+59252356 | None:intergenic |
| TCGGGTATGAATTCGGGCAT+GGG | 0.510233 | 4.4:+59253572 | None:intergenic |
| TTCAGATAGTGATGGAAACA+TGG | 0.511091 | 4.4:-59253318 | MS.gene98661:intron |
| TTCCTGATGAGTTGCTATAC+GGG | 0.519020 | 4.4:-59251039 | MS.gene98661:CDS |
| CTCCCGTATAGCAACTCATC+AGG | 0.523680 | 4.4:+59251037 | None:intergenic |
| CGCGGATTGCTCAAGCGAGT+GGG | 0.524035 | 4.4:-59249948 | MS.gene98661:CDS |
| GTGGATGAGATTATAAAGAA+TGG | 0.527571 | 4.4:-59250818 | MS.gene98661:CDS |
| GGAGAGGTGGTTTGGAGTCG+CGG | 0.532384 | 4.4:-59249966 | MS.gene98661:CDS |
| TTGGATGCAGCTATGGAAGC+AGG | 0.535125 | 4.4:-59249987 | MS.gene98661:CDS |
| TGAGTCCTTGAAATACTACT+TGG | 0.541601 | 4.4:-59252361 | MS.gene98661:CDS |
| TACACTTGTCAAAGCAGCTA+AGG | 0.542557 | 4.4:-59250534 | MS.gene98661:intron |
| GTTCTTGTGCACTGGTGCCA+TGG | 0.544555 | 4.4:-59250575 | MS.gene98661:CDS |
| TGAGTCACCGCCCGTTGTGA+CGG | 0.546187 | 4.4:+59253508 | None:intergenic |
| GCTGTGGCTGCAAAACATGC+TGG | 0.547640 | 4.4:-59252390 | MS.gene98661:CDS |
| TTCGGGTATGAATTCGGGCA+TGG | 0.553665 | 4.4:+59253571 | None:intergenic |
| AAGTATTGGGGTGCTGCGCA+TGG | 0.553718 | 4.4:-59250740 | MS.gene98661:CDS |
| TGTTTGTGCTCTTGGTGCTG+TGG | 0.555848 | 4.4:-59252406 | MS.gene98661:CDS |
| GCAGGGAATTTAGACTCTGA+AGG | 0.559721 | 4.4:+59249705 | None:intergenic |
| TGTCACTTTACCAACTTACC+GGG | 0.562638 | 4.4:-59249887 | MS.gene98661:CDS |
| CGCTCAAAGAGTGGAGCATG+AGG | 0.566052 | 4.4:+59253464 | None:intergenic |
| CCTTTGATGTTTGAGTGGTA+CGG | 0.572324 | 4.4:-59250767 | MS.gene98661:CDS |
| TCAGATAGTGATGGAAACAT+GGG | 0.574239 | 4.4:-59253317 | MS.gene98661:intron |
| TCGCGGATTGCTCAAGCGAG+TGG | 0.575235 | 4.4:-59249949 | MS.gene98661:CDS |
| GGATTTGCCATGGTATTAGT+GGG | 0.575610 | 4.4:-59249926 | MS.gene98661:CDS |
| TGAGATTATAAAGAATGGTA+GGG | 0.581943 | 4.4:-59250813 | MS.gene98661:CDS |
| ATGCATTCCCACTAATACCA+TGG | 0.583093 | 4.4:+59249919 | None:intergenic |
| CTCGCAGGATAGTTTCCACT+AGG | 0.583639 | 4.4:+59250617 | None:intergenic |
| TGCAGCTATGGAAGCAGGAG+AGG | 0.584307 | 4.4:-59249982 | MS.gene98661:CDS |
| GGGAAAGAATCGATTTGACA+TGG | 0.585620 | 4.4:+59253598 | None:intergenic |
| TTAAACAAGCACCTTGGTCA+GGG | 0.585758 | 4.4:-59250986 | MS.gene98661:CDS |
| TTGTTTGTTTCAGATAGTGA+TGG | 0.589398 | 4.4:-59253326 | MS.gene98661:intron |
| CGTTTGAGACGCTCAAAGAG+TGG | 0.593367 | 4.4:+59253455 | None:intergenic |
| ATACATAACCGCTTTCCTAG+TGG | 0.597661 | 4.4:-59250632 | MS.gene98661:CDS |
| GAGCCATTCCAGGAGCTCCA+TGG | 0.598340 | 4.4:+59250558 | None:intergenic |
| AGAGCGATGTTCTTGTGCAC+TGG | 0.604991 | 4.4:-59250583 | MS.gene98661:CDS |
| GAGTTGCTATACGGGAGAGG+TGG | 0.605255 | 4.4:-59251031 | MS.gene98661:CDS |
| CCGTACCACTCAAACATCAA+AGG | 0.606044 | 4.4:+59250767 | None:intergenic |
| AAGCGAGTGGGGATTTGCCA+TGG | 0.606586 | 4.4:-59249936 | MS.gene98661:CDS |
| AAAGAGTGGAGCATGAGGCA+TGG | 0.609365 | 4.4:+59253469 | None:intergenic |
| AATGTCCTTTGATGTTTGAG+TGG | 0.609506 | 4.4:-59250772 | MS.gene98661:CDS |
| ATTCTCATAGTTCATAAGCA+GGG | 0.611602 | 4.4:+59249688 | None:intergenic |
| GATGAGTTGCTATACGGGAG+AGG | 0.614709 | 4.4:-59251034 | MS.gene98661:CDS |
| CATTGGTATTGCAAGTGACG+TGG | 0.617956 | 4.4:+59253215 | None:intergenic |
| AGCTATGGAAGCAGGAGAGG+TGG | 0.624432 | 4.4:-59249979 | MS.gene98661:CDS |
| GTGGAGCATGAGGCATGGCG+AGG | 0.625084 | 4.4:+59253474 | None:intergenic |
| GATAGTTTCCACTAGGAAAG+CGG | 0.626371 | 4.4:+59250624 | None:intergenic |
| GAGCATGAGGCATGGCGAGG+AGG | 0.629695 | 4.4:+59253477 | None:intergenic |
| GGTTTAACTGGACAACATGT+TGG | 0.634315 | 4.4:-59253295 | MS.gene98661:CDS |
| ATATCTGGAGGTGAAATGCA+TGG | 0.634490 | 4.4:-59249798 | MS.gene98661:CDS |
| AGAAGCAGTCACCGTCACAA+CGG | 0.634571 | 4.4:-59253519 | MS.gene98661:CDS |
| GCAGTCACCGTCACAACGGG+CGG | 0.635258 | 4.4:-59253515 | MS.gene98661:CDS |
| GCGGATTGCTCAAGCGAGTG+GGG | 0.635330 | 4.4:-59249947 | MS.gene98661:CDS |
| TTGTTCTTAAACAAGCACCT+TGG | 0.637354 | 4.4:-59250992 | MS.gene98661:CDS |
| AAGGAACTGTTCCCTGACCA+AGG | 0.641537 | 4.4:+59250975 | None:intergenic |
| ATTGAAGCCTGATGAGCTTG+AGG | 0.641987 | 4.4:-59250681 | MS.gene98661:CDS |
| GCTCATAATCTGATATCTGG+AGG | 0.642342 | 4.4:-59249810 | MS.gene98661:CDS |
| AGACTCACAGTATAACTGGA+AGG | 0.642357 | 4.4:+59250956 | None:intergenic |
| CAGATAGTGATGGAAACATG+GGG | 0.649481 | 4.4:-59253316 | MS.gene98661:CDS |
| TGGTACGGAGAGAAGTATTG+GGG | 0.653870 | 4.4:-59250752 | MS.gene98661:CDS |
| GATGTAGATTAAGCTACCGA+AGG | 0.665710 | 4.4:-59251065 | MS.gene98661:intron |
| GGTGACTTTACTCTATACTG+TGG | 0.690643 | 4.4:-59253274 | MS.gene98661:CDS |
| TATAATCTCATCCACTACCG+TGG | 0.694290 | 4.4:+59250826 | None:intergenic |
| GATGAGCTTGAGGATGTTAG+GGG | 0.695654 | 4.4:-59250671 | MS.gene98661:CDS |
| TCTGGAGGTGAAATGCATGG+AGG | 0.807069 | 4.4:-59249795 | MS.gene98661:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAGAAATTATTAGT+TGG | + | chr4.4:59252153-59252172 | None:intergenic | 10.0% |
| !! | ACATTATCTTAAATTATTGT+CGG | - | chr4.4:59251810-59251829 | MS.gene98661:intron | 15.0% |
| !! | ATAAATCATCAATAATGAAA+CGG | + | chr4.4:59252918-59252937 | None:intergenic | 15.0% |
| !!! | CTATATAGGTTTTTTAAAAA+AGG | + | chr4.4:59253194-59253213 | None:intergenic | 15.0% |
| !!! | CTTTTTTAAAAAACCTATAT+AGG | - | chr4.4:59253192-59253211 | MS.gene98661:CDS | 15.0% |
| !!! | TTTTTTTTCAATTAAGATCA+CGG | - | chr4.4:59250434-59250453 | MS.gene98661:intron | 15.0% |
| !! | AGAAATTTAATTATGGGAAT+TGG | - | chr4.4:59252078-59252097 | MS.gene98661:intron | 20.0% |
| !! | ATGGGTAGAAATTTAATTAT+GGG | - | chr4.4:59252072-59252091 | MS.gene98661:intron | 20.0% |
| !! | TATGGGTAGAAATTTAATTA+TGG | - | chr4.4:59252071-59252090 | MS.gene98661:intron | 20.0% |
| !!! | ACTTTTTAGTCTTATTTGTT+TGG | - | chr4.4:59251683-59251702 | MS.gene98661:intron | 20.0% |
| !!! | AGGTTTTTTAAAAAAGGTTT+TGG | + | chr4.4:59253188-59253207 | None:intergenic | 20.0% |
| !!! | AGTCTTTAAATTTTGTACAA+GGG | - | chr4.4:59251064-59251083 | MS.gene98661:intron | 20.0% |
| !!! | AGTTTTGAACTTTGAATTAT+TGG | - | chr4.4:59250822-59250841 | MS.gene98661:CDS | 20.0% |
| !!! | ATTGAAATATGTTTTTGTAG+TGG | - | chr4.4:59252004-59252023 | MS.gene98661:intron | 20.0% |
| !!! | GATTTTATCTTAGAAAAACA+TGG | + | chr4.4:59252810-59252829 | None:intergenic | 20.0% |
| !!! | GGTTTTTTAAAAAAGGTTTT+GGG | + | chr4.4:59253187-59253206 | None:intergenic | 20.0% |
| !!! | TAGTCTTTAAATTTTGTACA+AGG | - | chr4.4:59251063-59251082 | MS.gene98661:intron | 20.0% |
| !!! | TTCATTATTGATGATTTATC+AGG | - | chr4.4:59252919-59252938 | MS.gene98661:intron | 20.0% |
| ! | AAAACGTACAATTTGACAAA+GGG | + | chr4.4:59252379-59252398 | None:intergenic | 25.0% |
| ! | AAAGTTCAAAACTACTTTAC+AGG | + | chr4.4:59250815-59250834 | None:intergenic | 25.0% |
| ! | AACAAAGATGATTCCTATAT+AGG | + | chr4.4:59253208-59253227 | None:intergenic | 25.0% |
| ! | AACCGATAAACAGATTATAT+CGG | - | chr4.4:59250249-59250268 | MS.gene98661:intron | 25.0% |
| ! | AATACTAGAAATGTATGAGA+TGG | + | chr4.4:59253006-59253025 | None:intergenic | 25.0% |
| ! | AGAAGATGATATGATGAATA+GGG | + | chr4.4:59249887-59249906 | None:intergenic | 25.0% |
| ! | AGTGTAGTAAAATAATCTTG+AGG | - | chr4.4:59253155-59253174 | MS.gene98661:intron | 25.0% |
| ! | ATAAGCAGTAAACTCAAAAA+TGG | - | chr4.4:59250773-59250792 | MS.gene98661:CDS | 25.0% |
| ! | ATATATAAGATGGAAACACT+AGG | - | chr4.4:59251258-59251277 | MS.gene98661:intron | 25.0% |
| ! | ATCCGATATAATCTGTTTAT+CGG | + | chr4.4:59250254-59250273 | None:intergenic | 25.0% |
| ! | ATGAGATTATAAAGAATGGT+AGG | - | chr4.4:59252474-59252493 | MS.gene98661:intron | 25.0% |
| ! | GCTAGTCAAAATAAGTTATA+TGG | - | chr4.4:59250691-59250710 | MS.gene98661:CDS | 25.0% |
| ! | GTAGTGTTCAATAAAATTAG+CGG | - | chr4.4:59250345-59250364 | MS.gene98661:intron | 25.0% |
| ! | GTCCCTAAATGAAAATATAA+GGG | - | chr4.4:59251109-59251128 | MS.gene98661:intron | 25.0% |
| ! | TAAGCAGTAAACTCAAAAAT+GGG | - | chr4.4:59250774-59250793 | MS.gene98661:CDS | 25.0% |
| ! | TATCTTAAATTATTGTCGGT+CGG | - | chr4.4:59251814-59251833 | MS.gene98661:intron | 25.0% |
| ! | TATGAATGTTCTTATGGATA+TGG | - | chr4.4:59252583-59252602 | MS.gene98661:intron | 25.0% |
| ! | TATGTAGATTGAAAGTTACA+TGG | - | chr4.4:59251728-59251747 | MS.gene98661:intron | 25.0% |
| ! | TGAGATTATAAAGAATGGTA+GGG | - | chr4.4:59252475-59252494 | MS.gene98661:intron | 25.0% |
| ! | TGTCCCTAAATGAAAATATA+AGG | - | chr4.4:59251108-59251127 | MS.gene98661:intron | 25.0% |
| ! | TGTGAATGGTATATATAAGA+TGG | - | chr4.4:59251248-59251267 | MS.gene98661:intron | 25.0% |
| ! | TTAGAAAAACATGGTATCAA+TGG | + | chr4.4:59252801-59252820 | None:intergenic | 25.0% |
| ! | TTATACTATTAGGAAGGATT+GGG | - | chr4.4:59251881-59251900 | MS.gene98661:intron | 25.0% |
| ! | TTGTCATACAAATAACATCA+AGG | - | chr4.4:59253031-59253050 | MS.gene98661:intron | 25.0% |
| ! | TTTGTGCTTCTTATACTATT+AGG | - | chr4.4:59251871-59251890 | MS.gene98661:intron | 25.0% |
| !! | AGTCCCTTATATTTTCATTT+AGG | + | chr4.4:59251115-59251134 | None:intergenic | 25.0% |
| !! | GTCCCTTATATTTTCATTTA+GGG | + | chr4.4:59251114-59251133 | None:intergenic | 25.0% |
| !! | GTCTTTAAATTTTGTACAAG+GGG | - | chr4.4:59251065-59251084 | MS.gene98661:intron | 25.0% |
| !!! | ATTGTACGTTTTGATTGAAT+TGG | - | chr4.4:59252387-59252406 | MS.gene98661:CDS | 25.0% |
| !!! | CTACTATTTTTACCAAATAG+AGG | + | chr4.4:59250224-59250243 | None:intergenic | 25.0% |
| !!! | TTATTTTGACTAGCTTAGAA+CGG | + | chr4.4:59250685-59250704 | None:intergenic | 25.0% |
| !!! | TTGTACGTTTTGATTGAATT+GGG | - | chr4.4:59252388-59252407 | MS.gene98661:CDS | 25.0% |
| !!! | TTTGGTGGTTATATTTTATG+TGG | - | chr4.4:59250198-59250217 | MS.gene98661:intron | 25.0% |
| !!! | TTTTGGAGATAAAGAATTCT+TGG | - | chr4.4:59253282-59253301 | MS.gene98661:CDS | 25.0% |
| AAATTATACCACCCAACTAT+TGG | + | chr4.4:59251531-59251550 | None:intergenic | 30.0% | |
| AAATTGCGAAGGATCAAAAT+GGG | - | chr4.4:59251655-59251674 | MS.gene98661:intron | 30.0% | |
| AATGTATGAGATGGAAAACT+CGG | + | chr4.4:59252997-59253016 | None:intergenic | 30.0% | |
| ACAAACAAGTGGTAAATGAA+AGG | + | chr4.4:59253236-59253255 | None:intergenic | 30.0% | |
| ACAAATAACATCAAGGAACA+AGG | - | chr4.4:59253038-59253057 | MS.gene98661:intron | 30.0% | |
| CAAAACGTACAATTTGACAA+AGG | + | chr4.4:59252380-59252399 | None:intergenic | 30.0% | |
| CAAACAAGTGGTAAATGAAA+GGG | + | chr4.4:59253235-59253254 | None:intergenic | 30.0% | |
| CTTATACTATTAGGAAGGAT+TGG | - | chr4.4:59251880-59251899 | MS.gene98661:intron | 30.0% | |
| GAGAAGATGATATGATGAAT+AGG | + | chr4.4:59249888-59249907 | None:intergenic | 30.0% | |
| GATAAAATCTCCACATAATC+TGG | - | chr4.4:59252821-59252840 | MS.gene98661:intron | 30.0% | |
| GTAATTGAATGTAATCGTGT+TGG | + | chr4.4:59251781-59251800 | None:intergenic | 30.0% | |
| GTGGATGAGATTATAAAGAA+TGG | - | chr4.4:59252470-59252489 | MS.gene98661:intron | 30.0% | |
| TACCACTTGTTTGTAACTTT+AGG | - | chr4.4:59253242-59253261 | MS.gene98661:CDS | 30.0% | |
| TATGCGCAATATCAAGAATT+GGG | + | chr4.4:59253084-59253103 | None:intergenic | 30.0% | |
| TCTACTTTCAATATCTTGTC+CGG | - | chr4.4:59251839-59251858 | MS.gene98661:intron | 30.0% | |
| TGACTAAAAAAAGACTCGTT+TGG | + | chr4.4:59250737-59250756 | None:intergenic | 30.0% | |
| TGCTTCTTATACTATTAGGA+AGG | - | chr4.4:59251875-59251894 | MS.gene98661:intron | 30.0% | |
| TGGGATTATGAATGTTCTTA+TGG | - | chr4.4:59252577-59252596 | MS.gene98661:intron | 30.0% | |
| TTAGAACCGTGATCTTAAAA+GGG | + | chr4.4:59250640-59250659 | None:intergenic | 30.0% | |
| TTATGCGCAATATCAAGAAT+TGG | + | chr4.4:59253085-59253104 | None:intergenic | 30.0% | |
| TTCCTAAAGTTACAAACAAG+TGG | + | chr4.4:59253247-59253266 | None:intergenic | 30.0% | |
| TTGTTTGTTTCAGATAGTGA+TGG | - | chr4.4:59249962-59249981 | MS.gene98661:CDS | 30.0% | |
| ! | AAAAACAATCCTCAGGTTTT+TGG | - | chr4.4:59253265-59253284 | MS.gene98661:CDS | 30.0% |
| ! | AGAGCAAAGTGTTAAATCAT+TGG | + | chr4.4:59250093-59250112 | None:intergenic | 30.0% |
| ! | GGAACAAGGTTTTTAAATCA+TGG | - | chr4.4:59253052-59253071 | MS.gene98661:intron | 30.0% |
| ! | GTTGATAAGCTAGCTTATAA+CGG | - | chr4.4:59250294-59250313 | MS.gene98661:intron | 30.0% |
| ! | TAAAAAGCATGCAAAAGCTT+TGG | + | chr4.4:59253449-59253468 | None:intergenic | 30.0% |
| ! | TATTTTATGTGGCCTCTATT+TGG | - | chr4.4:59250209-59250228 | MS.gene98661:intron | 30.0% |
| ! | TTTAGAACCGTGATCTTAAA+AGG | + | chr4.4:59250641-59250660 | None:intergenic | 30.0% |
| !! | ACTTTGAATTATTGGTTTGC+AGG | - | chr4.4:59250830-59250849 | MS.gene98661:CDS | 30.0% |
| !! | CTTCATTGCATTTGTTGTTT+AGG | - | chr4.4:59252874-59252893 | MS.gene98661:intron | 30.0% |
| !! | CTTTGAATTATTGGTTTGCA+GGG | - | chr4.4:59250831-59250850 | MS.gene98661:intron | 30.0% |
| !! | GCGTTTCTGAATTTGTTTTT+AGG | - | chr4.4:59252439-59252458 | MS.gene98661:CDS | 30.0% |
| !!! | TTTTTTTCTCATGCATATGC+TGG | - | chr4.4:59252963-59252982 | MS.gene98661:intron | 30.0% |
| AAATAAGTCGCATTTGACTG+TGG | + | chr4.4:59253108-59253127 | None:intergenic | 35.0% | |
| AATAGGGTACAGTTTCTTTG+AGG | + | chr4.4:59249871-59249890 | None:intergenic | 35.0% | |
| AATGTCCTTTGATGTTTGAG+TGG | - | chr4.4:59252516-59252535 | MS.gene98661:intron | 35.0% | |
| ACAGTCAAATGCGACTTATT+TGG | - | chr4.4:59253107-59253126 | MS.gene98661:intron | 35.0% | |
| ACTCCTTCAAAAAGTGAATG+GGG | + | chr4.4:59253526-59253545 | None:intergenic | 35.0% | |
| AGAGCTCATAATCTGATATC+TGG | - | chr4.4:59253475-59253494 | MS.gene98661:CDS | 35.0% | |
| ATAGGTTGTGTGTTTACATG+AGG | - | chr4.4:59251213-59251232 | MS.gene98661:intron | 35.0% | |
| ATATGGTCATCAGAAAGTGA+CGG | - | chr4.4:59250708-59250727 | MS.gene98661:CDS | 35.0% | |
| ATCTACATCCCACAACAATA+AGG | + | chr4.4:59252212-59252231 | None:intergenic | 35.0% | |
| CAAATAGAGACACAACAACA+CGG | + | chr4.4:59250182-59250201 | None:intergenic | 35.0% | |
| CACTCCTTCAAAAAGTGAAT+GGG | + | chr4.4:59253527-59253546 | None:intergenic | 35.0% | |
| CGTACAATACACCAAATTGT+GGG | - | chr4.4:59250566-59250585 | MS.gene98661:CDS | 35.0% | |
| CTACTTTCAATATCTTGTCC+GGG | - | chr4.4:59251840-59251859 | MS.gene98661:intron | 35.0% | |
| GAAATTGCGAAGGATCAAAA+TGG | - | chr4.4:59251654-59251673 | MS.gene98661:intron | 35.0% | |
| GGATAACTCTAGTGGTTTAT+GGG | - | chr4.4:59252054-59252073 | MS.gene98661:intron | 35.0% | |
| GTAAAATAATCTTGAGGCCA+AGG | - | chr4.4:59253161-59253180 | MS.gene98661:CDS | 35.0% | |
| GTATAAATACTTCGTGTTCC+CGG | + | chr4.4:59253422-59253441 | None:intergenic | 35.0% | |
| TATAAAGAATGGTAGGGCAT+TGG | - | chr4.4:59252481-59252500 | MS.gene98661:intron | 35.0% | |
| TATGCAAGGAAAGTAAACTG+TGG | - | chr4.4:59251607-59251626 | MS.gene98661:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr4.4:59250540-59250559 | MS.gene98661:CDS | 35.0% | |
| TCTTTATCTCCAAAAACCTG+AGG | + | chr4.4:59253277-59253296 | None:intergenic | 35.0% | |
| TGAGTCCTTGAAATACTACT+TGG | - | chr4.4:59250927-59250946 | MS.gene98661:intron | 35.0% | |
| TGGATAACTCTAGTGGTTTA+TGG | - | chr4.4:59252053-59252072 | MS.gene98661:intron | 35.0% | |
| TGGTAAACTACTGTTTGATC+TGG | + | chr4.4:59252133-59252152 | None:intergenic | 35.0% | |
| TTCAATTAAGATCACGGTTC+TGG | - | chr4.4:59250440-59250459 | MS.gene98661:intron | 35.0% | |
| TTGTTCTTAAACAAGCACCT+TGG | - | chr4.4:59252296-59252315 | MS.gene98661:intron | 35.0% | |
| ! | ATAAAGAATGGTAGGGCATT+GGG | - | chr4.4:59252482-59252501 | MS.gene98661:intron | 35.0% |
| ! | CTTTAGGAAAAACAATCCTC+AGG | - | chr4.4:59253258-59253277 | MS.gene98661:CDS | 35.0% |
| ! | GTTTTCTATCTGACATGTGT+TGG | - | chr4.4:59251752-59251771 | MS.gene98661:intron | 35.0% |
| ! | TCAGATAGTGATGGAAACAT+GGG | - | chr4.4:59249971-59249990 | MS.gene98661:CDS | 35.0% |
| ! | TTCAGATAGTGATGGAAACA+TGG | - | chr4.4:59249970-59249989 | MS.gene98661:CDS | 35.0% |
| !! | AAAGACTTGTTAAACGTGTG+TGG | + | chr4.4:59249926-59249945 | None:intergenic | 35.0% |
| !! | ACTACTTTACAGGTCTTGTT+TGG | + | chr4.4:59250805-59250824 | None:intergenic | 35.0% |
| !! | AGGGATGTGACTTTTATTTG+TGG | - | chr4.4:59250850-59250869 | MS.gene98661:intron | 35.0% |
| !! | CATTGCATTTGTTGTTTAGG+TGG | - | chr4.4:59252877-59252896 | MS.gene98661:intron | 35.0% |
| !! | TGACTAAGCCTTATTGTTGT+GGG | - | chr4.4:59252201-59252220 | MS.gene98661:intron | 35.0% |
| !! | TTGACTAAGCCTTATTGTTG+TGG | - | chr4.4:59252200-59252219 | MS.gene98661:intron | 35.0% |
| !!! | CATTCACTTTTTGAAGGAGT+GGG | - | chr4.4:59253526-59253545 | MS.gene98661:CDS | 35.0% |
| !!! | CTGAATTTGTTTTTAGGCCA+CGG | - | chr4.4:59252445-59252464 | MS.gene98661:intron | 35.0% |
| !!! | TTAAAAAAGGTTTTGGGCCT+TGG | + | chr4.4:59253181-59253200 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr4.4:59250541-59250560 | None:intergenic | 35.0% |
| AAAGACTGTATTGAGCTGCA+AGG | + | chr4.4:59251022-59251041 | None:intergenic | 40.0% | |
| AACTCATCAGGAAGATCCTT+CGG | + | chr4.4:59252242-59252261 | None:intergenic | 40.0% | |
| ACAAAACACGTGAATGAACC+TGG | + | chr4.4:59250153-59250172 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4.4:59250534-59250553 | MS.gene98661:intron | 40.0% | |
| ACGGTTATGGATAACTCTAG+TGG | - | chr4.4:59252046-59252065 | MS.gene98661:intron | 40.0% | |
| ACTCTATACTGTGGTCTTCT+TGG | - | chr4.4:59250023-59250042 | MS.gene98661:intron | 40.0% | |
| AGAATTCTTGGATGCAGCTA+TGG | - | chr4.4:59253294-59253313 | MS.gene98661:CDS | 40.0% | |
| AGACTCACAGTATAACTGGA+AGG | + | chr4.4:59252335-59252354 | None:intergenic | 40.0% | |
| ATACATAACCGCTTTCCTAG+TGG | - | chr4.4:59252656-59252675 | MS.gene98661:intron | 40.0% | |
| ATATCTGGAGGTGAAATGCA+TGG | - | chr4.4:59253490-59253509 | MS.gene98661:CDS | 40.0% | |
| ATGCATTCCCACTAATACCA+TGG | + | chr4.4:59253372-59253391 | None:intergenic | 40.0% | |
| ATGGAAACACTAGGAGATGT+CGG | - | chr4.4:59251267-59251286 | MS.gene98661:intron | 40.0% | |
| ATGGAAACATGGGGTTTAAC+TGG | - | chr4.4:59249981-59250000 | MS.gene98661:CDS | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr4.4:59250535-59250554 | MS.gene98661:CDS | 40.0% | |
| CCACTCCTTCAAAAAGTGAA+TGG | + | chr4.4:59253528-59253547 | None:intergenic | 40.0% | |
| CCTTTGATGTTTGAGTGGTA+CGG | - | chr4.4:59252521-59252540 | MS.gene98661:intron | 40.0% | |
| CTAAATTGTGCTCTCAATCG+TGG | - | chr4.4:59253131-59253150 | MS.gene98661:intron | 40.0% | |
| CTGAGCCAAGTAGTATTTCA+AGG | + | chr4.4:59250935-59250954 | None:intergenic | 40.0% | |
| CTTCCTGATGAGTTGCTATA+CGG | - | chr4.4:59252248-59252267 | MS.gene98661:intron | 40.0% | |
| GAACAGACTCACAGTATAAC+TGG | + | chr4.4:59252339-59252358 | None:intergenic | 40.0% | |
| GATAGTTTCCACTAGGAAAG+CGG | + | chr4.4:59252667-59252686 | None:intergenic | 40.0% | |
| GATGTAGATTAAGCTACCGA+AGG | - | chr4.4:59252223-59252242 | MS.gene98661:intron | 40.0% | |
| GCGTACAATACACCAAATTG+TGG | - | chr4.4:59250565-59250584 | MS.gene98661:CDS | 40.0% | |
| GCTCATAATCTGATATCTGG+AGG | - | chr4.4:59253478-59253497 | MS.gene98661:CDS | 40.0% | |
| GGATTTGCCATGGTATTAGT+GGG | - | chr4.4:59253362-59253381 | MS.gene98661:intron | 40.0% | |
| GGTGACTTTACTCTATACTG+TGG | - | chr4.4:59250014-59250033 | MS.gene98661:intron | 40.0% | |
| GGTTTAACTGGACAACATGT+TGG | - | chr4.4:59249993-59250012 | MS.gene98661:CDS | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr4.4:59250490-59250509 | MS.gene98661:intron | 40.0% | |
| GTTGTTGTGTCTCTATTTGG+TGG | - | chr4.4:59250183-59250202 | MS.gene98661:intron | 40.0% | |
| TACACTTGTCAAAGCAGCTA+AGG | - | chr4.4:59252754-59252773 | MS.gene98661:intron | 40.0% | |
| TATAATCTCATCCACTACCG+TGG | + | chr4.4:59252465-59252484 | None:intergenic | 40.0% | |
| TATGGTCATCAGAAAGTGAC+GGG | - | chr4.4:59250709-59250728 | MS.gene98661:CDS | 40.0% | |
| TGATGAGCTTGAGGATGTTA+GGG | - | chr4.4:59252616-59252635 | MS.gene98661:intron | 40.0% | |
| TTAAACAAGCACCTTGGTCA+GGG | - | chr4.4:59252302-59252321 | MS.gene98661:intron | 40.0% | |
| TTCCTGATGAGTTGCTATAC+GGG | - | chr4.4:59252249-59252268 | MS.gene98661:intron | 40.0% | |
| ! | AATTAAGATCACGGTTCTGG+AGG | - | chr4.4:59250443-59250462 | MS.gene98661:intron | 40.0% |
| ! | AGGCATGGCTTATCTCTTTT+TGG | - | chr4.4:59253549-59253568 | MS.gene98661:CDS | 40.0% |
| ! | AGTCAAGTTGCAATACCTGT+TGG | + | chr4.4:59250960-59250979 | None:intergenic | 40.0% |
| ! | CAGATAGTGATGGAAACATG+GGG | - | chr4.4:59249972-59249991 | MS.gene98661:CDS | 40.0% |
| ! | CGTGTTGTTGTGTCTCTATT+TGG | - | chr4.4:59250180-59250199 | MS.gene98661:intron | 40.0% |
| ! | GGCTTATCTCTTTTTGGACA+TGG | - | chr4.4:59253555-59253574 | MS.gene98661:CDS | 40.0% |
| !! | ACTGTTTGATCTGGTTCTTG+AGG | + | chr4.4:59252124-59252143 | None:intergenic | 40.0% |
| !! | ACTTTTATTTGTGGACGTGC+TGG | - | chr4.4:59250859-59250878 | MS.gene98661:intron | 40.0% |
| !! | ATTAAGATCACGGTTCTGGA+GGG | - | chr4.4:59250444-59250463 | MS.gene98661:intron | 40.0% |
| !! | CTCTTATCTTTTTCACTCGC+AGG | + | chr4.4:59252689-59252708 | None:intergenic | 40.0% |
| !! | CTGTCACTTTACCAACTTAC+CGG | - | chr4.4:59253400-59253419 | MS.gene98661:intron | 40.0% |
| !! | TGCTGATTCGGGTATGAATT+CGG | + | chr4.4:59249726-59249745 | None:intergenic | 40.0% |
| !! | TGTCACTTTACCAACTTACC+GGG | - | chr4.4:59253401-59253420 | MS.gene98661:intron | 40.0% |
| !!! | AGACCCCATTCACTTTTTGA+AGG | - | chr4.4:59253520-59253539 | MS.gene98661:CDS | 40.0% |
| !!! | CCATTCACTTTTTGAAGGAG+TGG | - | chr4.4:59253525-59253544 | MS.gene98661:CDS | 40.0% |
| !!! | TTTTCTAGAGTCAGAGCGAT+AGG | - | chr4.4:59251195-59251214 | MS.gene98661:intron | 40.0% |
| AAACTCACATGGACCCGATA+GGG | + | chr4.4:59251457-59251476 | None:intergenic | 45.0% | |
| AAGAGTCAAGGAGAAAAGGG+CGG | + | chr4.4:59251334-59251353 | None:intergenic | 45.0% | |
| AATAGTTCCAACCCTAGCAG+CGG | - | chr4.4:59251167-59251186 | MS.gene98661:intron | 45.0% | |
| ACAAGTGTAAGAGCCATTCC+AGG | + | chr4.4:59252743-59252762 | None:intergenic | 45.0% | |
| ACCATCTGATCTTGATCGCA+CGG | - | chr4.4:59252027-59252046 | MS.gene98661:intron | 45.0% | |
| ATGAATTCGGGCATGGGATT+GGG | + | chr4.4:59249713-59249732 | None:intergenic | 45.0% | |
| ATTGAAGCCTGATGAGCTTG+AGG | - | chr4.4:59252607-59252626 | MS.gene98661:intron | 45.0% | |
| CAACTTTAGTAGTTGCGCCA+AGG | + | chr4.4:59250474-59250493 | None:intergenic | 45.0% | |
| CATTGGTATTGCAAGTGACG+TGG | + | chr4.4:59250076-59250095 | None:intergenic | 45.0% | |
| CCGTACCACTCAAACATCAA+AGG | + | chr4.4:59252524-59252543 | None:intergenic | 45.0% | |
| CTAACATCCTCAAGCTCATC+AGG | + | chr4.4:59252617-59252636 | None:intergenic | 45.0% | |
| CTGATGAGCTTGAGGATGTT+AGG | - | chr4.4:59252615-59252634 | MS.gene98661:intron | 45.0% | |
| CTTAAACAAGCACCTTGGTC+AGG | - | chr4.4:59252301-59252320 | MS.gene98661:intron | 45.0% | |
| GAGCTGCAAGGAAATTGCAA+AGG | + | chr4.4:59251010-59251029 | None:intergenic | 45.0% | |
| GATGAGCTTGAGGATGTTAG+GGG | - | chr4.4:59252617-59252636 | MS.gene98661:intron | 45.0% | |
| GCAAGGAAAGTAAACTGTGG+CGG | - | chr4.4:59251610-59251629 | MS.gene98661:intron | 45.0% | |
| GCAGGGAATTTAGACTCTGA+AGG | + | chr4.4:59253586-59253605 | None:intergenic | 45.0% | |
| GCCAAGAGTCAAGGAGAAAA+GGG | + | chr4.4:59251337-59251356 | None:intergenic | 45.0% | |
| GGGATTTGCCATGGTATTAG+TGG | - | chr4.4:59253361-59253380 | MS.gene98661:intron | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr4.4:59250496-59250515 | MS.gene98661:intron | 45.0% | |
| GTGATCTTAAAAGGGCAACC+CGG | + | chr4.4:59250632-59250651 | None:intergenic | 45.0% | |
| TAGTCAAGCTATGAGAGCTG+TGG | + | chr4.4:59252187-59252206 | None:intergenic | 45.0% | |
| TATGAATTCGGGCATGGGAT+TGG | + | chr4.4:59249714-59249733 | None:intergenic | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr4.4:59250497-59250516 | MS.gene98661:intron | 45.0% | |
| TGAACTCTAGACCGTCTGAT+CGG | + | chr4.4:59251974-59251993 | None:intergenic | 45.0% | |
| TGATCTTGATCGCACGGTTA+TGG | - | chr4.4:59252033-59252052 | MS.gene98661:intron | 45.0% | |
| TGCCAAGAGTCAAGGAGAAA+AGG | + | chr4.4:59251338-59251357 | None:intergenic | 45.0% | |
| TGCTTCTTGGAGTTCCTGTT+GGG | + | chr4.4:59249756-59249775 | None:intergenic | 45.0% | |
| ! | AGTGGTACGGAGAGAAGTAT+TGG | - | chr4.4:59252534-59252553 | MS.gene98661:intron | 45.0% |
| ! | ATGCTGCTTCTCTTTCTTCC+AGG | - | chr4.4:59250132-59250151 | MS.gene98661:intron | 45.0% |
| ! | ATTTTGGGCCTCCAAGATTC+CGG | - | chr4.4:59251392-59251411 | MS.gene98661:intron | 45.0% |
| ! | GACGGTCTAGAGTTCAAAGT+TGG | - | chr4.4:59251978-59251997 | MS.gene98661:intron | 45.0% |
| ! | GACGTAAATCACTGACTGCA+TGG | + | chr4.4:59251946-59251965 | None:intergenic | 45.0% |
| ! | GGCGAAGTGTTTGATATGCA+AGG | - | chr4.4:59251593-59251612 | MS.gene98661:intron | 45.0% |
| ! | GGTCATCAGAAGCATGTGAA+TGG | - | chr4.4:59251234-59251253 | MS.gene98661:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr4.4:59250530-59250549 | None:intergenic | 45.0% |
| ! | TTGCCATGGTGCCAATAGTT+GGG | - | chr4.4:59251517-59251536 | MS.gene98661:intron | 45.0% |
| !! | CGGTAAGTTGGTAAAGTGAC+AGG | + | chr4.4:59253402-59253421 | None:intergenic | 45.0% |
| !! | GCTGATTCGGGTATGAATTC+GGG | + | chr4.4:59249725-59249744 | None:intergenic | 45.0% |
| !! | GTGGTACGGAGAGAAGTATT+GGG | - | chr4.4:59252535-59252554 | MS.gene98661:intron | 45.0% |
| !! | TGGTACGGAGAGAAGTATTG+GGG | - | chr4.4:59252536-59252555 | MS.gene98661:intron | 45.0% |
| !! | TTAAGATCACGGTTCTGGAG+GGG | - | chr4.4:59250445-59250464 | MS.gene98661:intron | 45.0% |
| !! | TTGGGTTGAAGGTGCTGATT+CGG | + | chr4.4:59249738-59249757 | None:intergenic | 45.0% |
| !!! | GGGTTGCCCTTTTAAGATCA+CGG | - | chr4.4:59250631-59250650 | MS.gene98661:CDS | 45.0% |
| !!! | TCACTTTTTGAAGGAGTGGG+AGG | - | chr4.4:59253529-59253548 | MS.gene98661:CDS | 45.0% |
| !!! | TTGTTTTTAGGCCACGGTAG+TGG | - | chr4.4:59252451-59252470 | MS.gene98661:intron | 45.0% |
| AAAGAGTGGAGCATGAGGCA+TGG | + | chr4.4:59249822-59249841 | None:intergenic | 50.0% | |
| AACTCACATGGACCCGATAG+GGG | + | chr4.4:59251456-59251475 | None:intergenic | 50.0% | |
| AAGGAACTGTTCCCTGACCA+AGG | + | chr4.4:59252316-59252335 | None:intergenic | 50.0% | |
| ACCGTGCGATCAAGATCAGA+TGG | + | chr4.4:59252031-59252050 | None:intergenic | 50.0% | |
| ACTGTGGCGGTACATTACTG+TGG | - | chr4.4:59251623-59251642 | MS.gene98661:intron | 50.0% | |
| ACTTCGTGTTCCCGGTAAGT+TGG | + | chr4.4:59253414-59253433 | None:intergenic | 50.0% | |
| AGAAGCAGTCACCGTCACAA+CGG | - | chr4.4:59249769-59249788 | MS.gene98661:CDS | 50.0% | |
| AGAGCGATGTTCTTGTGCAC+TGG | - | chr4.4:59252705-59252724 | MS.gene98661:intron | 50.0% | |
| AGGAGAAAAGGGCGGATAAG+TGG | + | chr4.4:59251326-59251345 | None:intergenic | 50.0% | |
| ATCAGCACCTTCAACCCAAC+AGG | - | chr4.4:59249739-59249758 | MS.gene98661:CDS | 50.0% | |
| CAAACTCACATGGACCCGAT+AGG | + | chr4.4:59251458-59251477 | None:intergenic | 50.0% | |
| CAAGTACGAGTCCTTGGAGA+GGG | - | chr4.4:59251572-59251591 | MS.gene98661:intron | 50.0% | |
| CGGATAAGTGGGCCAGAAAA+GGG | + | chr4.4:59251314-59251333 | None:intergenic | 50.0% | |
| CTACTTGGCTCAGTTCCAAC+AGG | - | chr4.4:59250942-59250961 | MS.gene98661:intron | 50.0% | |
| CTAGACCGTCTGATCGGAAT+CGG | + | chr4.4:59251968-59251987 | None:intergenic | 50.0% | |
| CTATCGGGTCCATGTGAGTT+TGG | - | chr4.4:59251456-59251475 | MS.gene98661:intron | 50.0% | |
| CTCCCGTATAGCAACTCATC+AGG | + | chr4.4:59252254-59252273 | None:intergenic | 50.0% | |
| CTCGCAGGATAGTTTCCACT+AGG | + | chr4.4:59252674-59252693 | None:intergenic | 50.0% | |
| CTCTCCAAGGACTCGTACTT+GGG | + | chr4.4:59251573-59251592 | None:intergenic | 50.0% | |
| CTGCTTCTTGGAGTTCCTGT+TGG | + | chr4.4:59249757-59249776 | None:intergenic | 50.0% | |
| CTGTGGCGGTACATTACTGT+GGG | - | chr4.4:59251624-59251643 | MS.gene98661:intron | 50.0% | |
| GAAGCACAAACACTAACGCC+CGG | + | chr4.4:59251861-59251880 | None:intergenic | 50.0% | |
| GATGAGTTGCTATACGGGAG+AGG | - | chr4.4:59252254-59252273 | MS.gene98661:intron | 50.0% | |
| GGAGAAAAGGGCGGATAAGT+GGG | + | chr4.4:59251325-59251344 | None:intergenic | 50.0% | |
| GGATAAGTGGGCCAGAAAAG+GGG | + | chr4.4:59251313-59251332 | None:intergenic | 50.0% | |
| TACGTCCGATTCCGATCAGA+CGG | - | chr4.4:59251960-59251979 | MS.gene98661:intron | 50.0% | |
| TCGCAACTCGCCAGATTATG+TGG | + | chr4.4:59252834-59252853 | None:intergenic | 50.0% | |
| TCGGGTATGAATTCGGGCAT+GGG | + | chr4.4:59249719-59249738 | None:intergenic | 50.0% | |
| TCTCCAAGGACTCGTACTTG+GGG | + | chr4.4:59251572-59251591 | None:intergenic | 50.0% | |
| TCTGGAGGTGAAATGCATGG+AGG | - | chr4.4:59253493-59253512 | MS.gene98661:CDS | 50.0% | |
| TTCGGGTATGAATTCGGGCA+TGG | + | chr4.4:59249720-59249739 | None:intergenic | 50.0% | |
| TTGGATGCAGCTATGGAAGC+AGG | - | chr4.4:59253301-59253320 | MS.gene98661:CDS | 50.0% | |
| TTGTGACGGTGACTGCTTCT+TGG | + | chr4.4:59249769-59249788 | None:intergenic | 50.0% | |
| ! | ACGGGAGAGGTGGTTTTCTA+TGG | - | chr4.4:59252267-59252286 | MS.gene98661:intron | 50.0% |
| ! | CGGGAGAGGTGGTTTTCTAT+GGG | - | chr4.4:59252268-59252287 | MS.gene98661:intron | 50.0% |
| ! | CGTTTGAGACGCTCAAAGAG+TGG | + | chr4.4:59249836-59249855 | None:intergenic | 50.0% |
| ! | CTTGCCATGGTGCCAATAGT+TGG | - | chr4.4:59251516-59251535 | MS.gene98661:intron | 50.0% |
| ! | GCCATGCCTGAGGGAATTTT+GGG | - | chr4.4:59251377-59251396 | MS.gene98661:intron | 50.0% |
| ! | GCCCTTTTCTCCTTGACTCT+TGG | - | chr4.4:59251333-59251352 | MS.gene98661:intron | 50.0% |
| ! | GTACATTACTGTGGGCTGCA+AGG | - | chr4.4:59251632-59251651 | MS.gene98661:intron | 50.0% |
| ! | TTTTGGGCCTCCAAGATTCC+GGG | - | chr4.4:59251393-59251412 | MS.gene98661:intron | 50.0% |
| !! | TGGAGTTCCTGTTGGGTTGA+AGG | + | chr4.4:59249749-59249768 | None:intergenic | 50.0% |
| !! | TGGGTTGAAGGTGCTGATTC+GGG | + | chr4.4:59249737-59249756 | None:intergenic | 50.0% |
| !! | TGTTTGTGCTCTTGGTGCTG+TGG | - | chr4.4:59250882-59250901 | MS.gene98661:intron | 50.0% |
| !! | TTTTGAAGGAGTGGGAGGCA+TGG | - | chr4.4:59253534-59253553 | MS.gene98661:CDS | 50.0% |
| AACCCGTCAACCCGGAATCT+TGG | + | chr4.4:59251406-59251425 | None:intergenic | 55.0% | |
| AAGCCCACTATCCCCCTATC+GGG | - | chr4.4:59251441-59251460 | MS.gene98661:intron | 55.0% | |
| AAGCGAGTGGGGATTTGCCA+TGG | - | chr4.4:59253352-59253371 | MS.gene98661:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr4.4:59250509-59250528 | MS.gene98661:intron | 55.0% | |
| ACTCACATGGACCCGATAGG+GGG | + | chr4.4:59251455-59251474 | None:intergenic | 55.0% | |
| AGCTATGGAAGCAGGAGAGG+TGG | - | chr4.4:59253309-59253328 | MS.gene98661:CDS | 55.0% | |
| CAAACACTTCGCCCTCTCCA+AGG | + | chr4.4:59251586-59251605 | None:intergenic | 55.0% | |
| CAAGCCCACTATCCCCCTAT+CGG | - | chr4.4:59251440-59251459 | MS.gene98661:intron | 55.0% | |
| CATGTGAGTTTGGCGGGAAC+AGG | - | chr4.4:59251466-59251485 | MS.gene98661:intron | 55.0% | |
| CCAAGTACGAGTCCTTGGAG+AGG | - | chr4.4:59251571-59251590 | MS.gene98661:intron | 55.0% | |
| CCACCCAACTATTGGCACCA+TGG | + | chr4.4:59251523-59251542 | None:intergenic | 55.0% | |
| CCTCTCCAAGGACTCGTACT+TGG | + | chr4.4:59251574-59251593 | None:intergenic | 55.0% | |
| CGCTCAAAGAGTGGAGCATG+AGG | + | chr4.4:59249827-59249846 | None:intergenic | 55.0% | |
| CTCCAAGGACTCGTACTTGG+GGG | + | chr4.4:59251571-59251590 | None:intergenic | 55.0% | |
| CTCTTGGCACACGTCACCAT+AGG | - | chr4.4:59251349-59251368 | MS.gene98661:intron | 55.0% | |
| CTGTTCCCGCCAAACTCACA+TGG | + | chr4.4:59251468-59251487 | None:intergenic | 55.0% | |
| GAAGCAGTCACCGTCACAAC+GGG | - | chr4.4:59249770-59249789 | MS.gene98661:CDS | 55.0% | |
| GAGTTGCTATACGGGAGAGG+TGG | - | chr4.4:59252257-59252276 | MS.gene98661:intron | 55.0% | |
| GCACACGTCACCATAGGTGT+GGG | - | chr4.4:59251355-59251374 | MS.gene98661:intron | 55.0% | |
| GCCCAAAATTCCCTCAGGCA+TGG | + | chr4.4:59251381-59251400 | None:intergenic | 55.0% | |
| GCGGATAAGTGGGCCAGAAA+AGG | + | chr4.4:59251315-59251334 | None:intergenic | 55.0% | |
| GCTGTGGCTGCAAAACATGC+TGG | - | chr4.4:59250898-59250917 | MS.gene98661:intron | 55.0% | |
| GGGCTGCAAGGAAATTGCGA+AGG | - | chr4.4:59251644-59251663 | MS.gene98661:intron | 55.0% | |
| GTGACGTGTGCCAAGAGTCA+AGG | + | chr4.4:59251346-59251365 | None:intergenic | 55.0% | |
| TCCAAGGACTCGTACTTGGG+GGG | + | chr4.4:59251570-59251589 | None:intergenic | 55.0% | |
| TCGGGTCCATGTGAGTTTGG+CGG | - | chr4.4:59251459-59251478 | MS.gene98661:intron | 55.0% | |
| TGCAGCTATGGAAGCAGGAG+AGG | - | chr4.4:59253306-59253325 | MS.gene98661:CDS | 55.0% | |
| TGGAAGCAGGAGAGGTGGTT+TGG | - | chr4.4:59253314-59253333 | MS.gene98661:CDS | 55.0% | |
| TGGAGGCCCAAAATTCCCTC+AGG | + | chr4.4:59251386-59251405 | None:intergenic | 55.0% | |
| TGGGAAGGGGTCCCACAATT+TGG | + | chr4.4:59250580-59250599 | None:intergenic | 55.0% | |
| ! | AGAAAAGCACGCCGCTGCTA+GGG | + | chr4.4:59251181-59251200 | None:intergenic | 55.0% |
| ! | CCATGGTGCCAATAGTTGGG+TGG | - | chr4.4:59251520-59251539 | MS.gene98661:intron | 55.0% |
| ! | CCTCCAAGATTCCGGGTTGA+CGG | - | chr4.4:59251400-59251419 | MS.gene98661:intron | 55.0% |
| ! | CGTGCTGGTGTTTGTGCTCT+TGG | - | chr4.4:59250874-59250893 | MS.gene98661:intron | 55.0% |
| ! | CTCCAAGATTCCGGGTTGAC+GGG | - | chr4.4:59251401-59251420 | MS.gene98661:intron | 55.0% |
| ! | GGCCATGCCTGAGGGAATTT+TGG | - | chr4.4:59251376-59251395 | MS.gene98661:intron | 55.0% |
| ! | GTTCTTGTGCACTGGTGCCA+TGG | - | chr4.4:59252713-59252732 | MS.gene98661:intron | 55.0% |
| ! | TAGAAAAGCACGCCGCTGCT+AGG | + | chr4.4:59251182-59251201 | None:intergenic | 55.0% |
| !! | AAGTATTGGGGTGCTGCGCA+TGG | - | chr4.4:59252548-59252567 | MS.gene98661:intron | 55.0% |
| !! | AGATTCCGGGTTGACGGGTT+AGG | - | chr4.4:59251406-59251425 | MS.gene98661:intron | 55.0% |
| !! | GATTCCGGGTTGACGGGTTA+GGG | - | chr4.4:59251407-59251426 | MS.gene98661:intron | 55.0% |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr4.4:59250606-59250625 | None:intergenic | 60.0% | |
| ATAGGTGTGGGCCATGCCTG+AGG | - | chr4.4:59251367-59251386 | MS.gene98661:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr4.4:59250610-59250629 | MS.gene98661:CDS | 60.0% | |
| CATACGCAGGGTCTGGGAAG+GGG | + | chr4.4:59250593-59250612 | None:intergenic | 60.0% | |
| CCGTCAACCCGGAATCTTGG+AGG | + | chr4.4:59251403-59251422 | None:intergenic | 60.0% | |
| CGGGTCCATGTGAGTTTGGC+GGG | - | chr4.4:59251460-59251479 | MS.gene98661:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr4.4:59250605-59250624 | None:intergenic | 60.0% | |
| CTTCCCAGACCCTGCGTATG+CGG | - | chr4.4:59250593-59250612 | MS.gene98661:CDS | 60.0% | |
| GAGCCATTCCAGGAGCTCCA+TGG | + | chr4.4:59252733-59252752 | None:intergenic | 60.0% | |
| GCATACGCAGGGTCTGGGAA+GGG | + | chr4.4:59250594-59250613 | None:intergenic | 60.0% | |
| GCCAGAAAAGGGGTGAGCGT+GGG | + | chr4.4:59251303-59251322 | None:intergenic | 60.0% | |
| GGACCCGATAGGGGGATAGT+GGG | + | chr4.4:59251447-59251466 | None:intergenic | 60.0% | |
| GGCACACGTCACCATAGGTG+TGG | - | chr4.4:59251354-59251373 | MS.gene98661:intron | 60.0% | |
| GTGCCATGGAGCTCCTGGAA+TGG | - | chr4.4:59252727-59252746 | MS.gene98661:intron | 60.0% | |
| TAGGTGTGGGCCATGCCTGA+GGG | - | chr4.4:59251368-59251387 | MS.gene98661:intron | 60.0% | |
| TCAGGCATGGCCCACACCTA+TGG | + | chr4.4:59251368-59251387 | None:intergenic | 60.0% | |
| TGAGTCACCGCCCGTTGTGA+CGG | + | chr4.4:59249783-59249802 | None:intergenic | 60.0% | |
| TGGACCCGATAGGGGGATAG+TGG | + | chr4.4:59251448-59251467 | None:intergenic | 60.0% | |
| TTCCCAGACCCTGCGTATGC+GGG | - | chr4.4:59250594-59250613 | MS.gene98661:CDS | 60.0% | |
| ! | CGCGGATTGCTCAAGCGAGT+GGG | - | chr4.4:59253340-59253359 | MS.gene98661:intron | 60.0% |
| ! | GCGGATTGCTCAAGCGAGTG+GGG | - | chr4.4:59253341-59253360 | MS.gene98661:intron | 60.0% |
| ! | GGAGAGGTGGTTTGGAGTCG+CGG | - | chr4.4:59253322-59253341 | MS.gene98661:intron | 60.0% |
| ! | GTGCTGCGCATGGTTTGGCT+GGG | - | chr4.4:59252558-59252577 | MS.gene98661:intron | 60.0% |
| ! | TCCCACGCTCACCCCTTTTC+TGG | - | chr4.4:59251299-59251318 | MS.gene98661:intron | 60.0% |
| ! | TCGCGGATTGCTCAAGCGAG+TGG | - | chr4.4:59253339-59253358 | MS.gene98661:intron | 60.0% |
| !! | AGGGGGATAGTGGGCTTGGT+AGG | + | chr4.4:59251438-59251457 | None:intergenic | 60.0% |
| !! | CGATAGGGGGATAGTGGGCT+TGG | + | chr4.4:59251442-59251461 | None:intergenic | 60.0% |
| !! | CGGTTCTGGAGGGGTAACCT+TGG | - | chr4.4:59250454-59250473 | MS.gene98661:intron | 60.0% |
| !! | GGGATAGTGGGCTTGGTAGG+TGG | + | chr4.4:59251435-59251454 | None:intergenic | 60.0% |
| !! | TTGGGGTGCTGCGCATGGTT+TGG | - | chr4.4:59252553-59252572 | MS.gene98661:intron | 60.0% |
| AAGCACGCCGCTGCTAGGGT+TGG | + | chr4.4:59251177-59251196 | None:intergenic | 65.0% | |
| CGCATACGCAGGGTCTGGGA+AGG | + | chr4.4:59250595-59250614 | None:intergenic | 65.0% | |
| CTCCCGCATACGCAGGGTCT+GGG | + | chr4.4:59250599-59250618 | None:intergenic | 65.0% | |
| GAGCATGAGGCATGGCGAGG+AGG | + | chr4.4:59249814-59249833 | None:intergenic | 65.0% | |
| GAGGCATGGCGAGGAGGTTG+AGG | + | chr4.4:59249808-59249827 | None:intergenic | 65.0% | |
| GCAGTCACCGTCACAACGGG+CGG | - | chr4.4:59249773-59249792 | MS.gene98661:CDS | 65.0% | |
| GCCCCCCAAGTACGAGTCCT+TGG | - | chr4.4:59251566-59251585 | MS.gene98661:intron | 65.0% | |
| GGCCAGAAAAGGGGTGAGCG+TGG | + | chr4.4:59251304-59251323 | None:intergenic | 65.0% | |
| GGCTCCCTAACCCGTCAACC+CGG | + | chr4.4:59251414-59251433 | None:intergenic | 65.0% | |
| GTGGAGCATGAGGCATGGCG+AGG | + | chr4.4:59249817-59249836 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr4.4:59250611-59250630 | MS.gene98661:CDS | 65.0% | |
| ! | GGTGCTGCGCATGGTTTGGC+TGG | - | chr4.4:59252557-59252576 | MS.gene98661:intron | 65.0% |
| !! | CACTGGTGCCATGGAGCTCC+TGG | - | chr4.4:59252722-59252741 | MS.gene98661:intron | 65.0% |
| GAACAGGTCACCCCGCCACG+CGG | - | chr4.4:59251482-59251501 | MS.gene98661:intron | 70.0% | |
| GCTCCCGCATACGCAGGGTC+TGG | + | chr4.4:59250600-59250619 | None:intergenic | 70.0% | |
| ! | GGCGGGCACATGGCTTGCCA+TGG | - | chr4.4:59251503-59251522 | MS.gene98661:intron | 70.0% |
| CAAGCCATGTGCCCGCCGCG+TGG | + | chr4.4:59251500-59251519 | None:intergenic | 75.0% | |
| ! | AGGTCACCCCGCCACGCGGC+GGG | - | chr4.4:59251486-59251505 | MS.gene98661:intron | 80.0% |
| ! | CAGGTCACCCCGCCACGCGG+CGG | - | chr4.4:59251485-59251504 | MS.gene98661:intron | 80.0% |
| ! | CATGTGCCCGCCGCGTGGCG+GGG | + | chr4.4:59251495-59251514 | None:intergenic | 80.0% |
| ! | CCATGTGCCCGCCGCGTGGC+GGG | + | chr4.4:59251496-59251515 | None:intergenic | 80.0% |
| ! | GCCATGTGCCCGCCGCGTGG+CGG | + | chr4.4:59251497-59251516 | None:intergenic | 80.0% |
| ! | CCCGCCACGCGGCGGGCACA+TGG | - | chr4.4:59251493-59251512 | MS.gene98661:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 59249692 | 59253618 | 59249692 | ID=MS.gene98661 |
| chr4.4 | mRNA | 59249692 | 59253618 | 59249692 | ID=MS.gene98661.t1;Parent=MS.gene98661 |
| chr4.4 | exon | 59253430 | 59253618 | 59253430 | ID=MS.gene98661.t1.exon1;Parent=MS.gene98661.t1 |
| chr4.4 | CDS | 59253430 | 59253618 | 59253430 | ID=cds.MS.gene98661.t1;Parent=MS.gene98661.t1 |
| chr4.4 | exon | 59253157 | 59253335 | 59253157 | ID=MS.gene98661.t1.exon2;Parent=MS.gene98661.t1 |
| chr4.4 | CDS | 59253157 | 59253335 | 59253157 | ID=cds.MS.gene98661.t1;Parent=MS.gene98661.t1 |
| chr4.4 | exon | 59252347 | 59252458 | 59252347 | ID=MS.gene98661.t1.exon3;Parent=MS.gene98661.t1 |
| chr4.4 | CDS | 59252347 | 59252458 | 59252347 | ID=cds.MS.gene98661.t1;Parent=MS.gene98661.t1 |
| chr4.4 | exon | 59250964 | 59251080 | 59250964 | ID=MS.gene98661.t1.exon4;Parent=MS.gene98661.t1 |
| chr4.4 | CDS | 59250964 | 59251080 | 59250964 | ID=cds.MS.gene98661.t1;Parent=MS.gene98661.t1 |
| chr4.4 | exon | 59250535 | 59250849 | 59250535 | ID=MS.gene98661.t1.exon5;Parent=MS.gene98661.t1 |
| chr4.4 | CDS | 59250535 | 59250849 | 59250535 | ID=cds.MS.gene98661.t1;Parent=MS.gene98661.t1 |
| chr4.4 | exon | 59249692 | 59250030 | 59249692 | ID=MS.gene98661.t1.exon6;Parent=MS.gene98661.t1 |
| chr4.4 | CDS | 59249692 | 59250030 | 59249692 | ID=cds.MS.gene98661.t1;Parent=MS.gene98661.t1 |
| Gene Sequence |
| Protein sequence |
