Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98667.t1 | XP_024636346.1 | 92.1 | 649 | 47 | 3 | 1 | 645 | 1 | 649 | 0.00E+00 | 1168.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98667.t1 | F4JJT9 | 68.6 | 605 | 182 | 4 | 44 | 641 | 61 | 664 | 3.7e-242 | 839.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98667.t1 | G7JHA2 | 91.8 | 649 | 48 | 4 | 1 | 645 | 1 | 648 | 0.0e+00 | 1160.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070324 | MS.gene98667 | PPI |
| MS.gene98667 | MS.gene71948 | PPI |
| MS.gene072797 | MS.gene98667 | PPI |
| MS.gene030419 | MS.gene98667 | PPI |
| MS.gene72164 | MS.gene98667 | PPI |
| MS.gene048788 | MS.gene98667 | PPI |
| MS.gene98667 | MS.gene011533 | PPI |
| MS.gene98667 | MS.gene050373 | PPI |
| MS.gene62901 | MS.gene98667 | PPI |
| MS.gene55470 | MS.gene98667 | PPI |
| MS.gene015567 | MS.gene98667 | PPI |
| MS.gene47111 | MS.gene98667 | PPI |
| MS.gene98667 | MS.gene074123 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98667.t1 | MTR_4g052070 | 91.834 | 649 | 48 | 4 | 1 | 645 | 1 | 648 | 0.0 | 1214 |
| MS.gene98667.t1 | MTR_4g120810 | 78.163 | 664 | 120 | 6 | 1 | 640 | 1 | 663 | 0.0 | 1048 |
| MS.gene98667.t1 | MTR_8g104740 | 77.327 | 666 | 124 | 6 | 1 | 640 | 1 | 665 | 0.0 | 1038 |
| MS.gene98667.t1 | MTR_1g113700 | 75.963 | 649 | 107 | 5 | 1 | 640 | 1 | 609 | 0.0 | 978 |
| MS.gene98667.t1 | MTR_4g120810 | 75.973 | 591 | 117 | 6 | 1 | 567 | 1 | 590 | 0.0 | 903 |
| MS.gene98667.t1 | MTR_8g104740 | 75.211 | 593 | 120 | 6 | 1 | 567 | 1 | 592 | 0.0 | 895 |
| MS.gene98667.t1 | MTR_8g104740 | 87.417 | 453 | 47 | 2 | 198 | 640 | 1 | 453 | 0.0 | 818 |
| MS.gene98667.t1 | MTR_8g104740 | 84.984 | 313 | 37 | 2 | 265 | 567 | 1 | 313 | 0.0 | 545 |
| MS.gene98667.t1 | MTR_8g007295 | 27.414 | 321 | 204 | 11 | 7 | 326 | 61 | 353 | 4.67e-18 | 87.8 |
| MS.gene98667.t1 | MTR_8g007295 | 27.414 | 321 | 204 | 11 | 7 | 326 | 61 | 353 | 7.56e-18 | 87.8 |
| MS.gene98667.t1 | MTR_4g127770 | 21.944 | 319 | 213 | 9 | 30 | 324 | 564 | 870 | 4.30e-11 | 66.6 |
| MS.gene98667.t1 | MTR_4g127770 | 26.351 | 148 | 101 | 3 | 181 | 324 | 240 | 383 | 5.65e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98667.t1 | AT4G33760 | 68.960 | 596 | 178 | 3 | 52 | 641 | 70 | 664 | 0.0 | 869 |
| MS.gene98667.t1 | AT4G33760 | 69.754 | 529 | 153 | 3 | 119 | 641 | 1 | 528 | 0.0 | 783 |
| MS.gene98667.t1 | AT3G13490 | 25.517 | 290 | 196 | 9 | 39 | 326 | 104 | 375 | 6.83e-15 | 78.6 |
Find 144 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAATTGATTGCTTCTT+TGG | 0.089571 | 4.2:+50110664 | None:intergenic |
| ATTGATTGCTTCTTTGGTTT+TGG | 0.170081 | 4.2:+50110670 | None:intergenic |
| GCATCGTCAGAATTCAATTT+AGG | 0.234372 | 4.2:+50110266 | None:intergenic |
| AGGGATTGGTTGAGGGGTTT+AGG | 0.249411 | 4.2:+50110638 | None:intergenic |
| CAAAGGGTTTACTTACTCTT+TGG | 0.262069 | 4.2:-50108048 | MS.gene98667:CDS |
| TTTGTAAGGGAGATGTATTT+TGG | 0.264140 | 4.2:+50110703 | None:intergenic |
| ACATCAAAGATAATGCTTTA+AGG | 0.280841 | 4.2:+50110756 | None:intergenic |
| GCAAGGTTGTTCATGTCTTC+AGG | 0.297939 | 4.2:+50107434 | None:intergenic |
| TTCTGCTTTAGTTTCAAGTA+TGG | 0.300568 | 4.2:-50107912 | MS.gene98667:CDS |
| CTGCCATTCAAGGTGTTGTT+AGG | 0.302813 | 4.2:-50110397 | MS.gene98667:CDS |
| AGACCACACCGGCATTATTC+AGG | 0.315831 | 4.2:-50110489 | MS.gene98667:CDS |
| AATACAGGAGGCATATCTTT+TGG | 0.318749 | 4.2:-50106825 | MS.gene98667:intron |
| TCTAGATCAAATCTGGTATC+TGG | 0.318832 | 4.2:+50108466 | None:intergenic |
| TGAGTTCACACAACTGGATA+TGG | 0.319067 | 4.2:-50108984 | MS.gene98667:CDS |
| TTGTTCATGTCTTCAGGATT+TGG | 0.324171 | 4.2:+50107440 | None:intergenic |
| GGTATCGATGTCTTGATCTA+AGG | 0.337704 | 4.2:-50109704 | MS.gene98667:CDS |
| TTTCAGGCTGAAGCGAAGTA+TGG | 0.346207 | 4.2:-50107071 | MS.gene98667:intron |
| GATGAGTCCTTGAAATCCTT+TGG | 0.361551 | 4.2:+50110615 | None:intergenic |
| TTGAAATCCTTTGGAGGGAT+TGG | 0.366921 | 4.2:+50110624 | None:intergenic |
| AAATATTCCCGGGAACCTTC+TGG | 0.369193 | 4.2:+50109453 | None:intergenic |
| AGGTTCAAGAGTTGAATTCT+AGG | 0.386972 | 4.2:-50110310 | MS.gene98667:CDS |
| TTAAATATCTGAGGGCTTTG+TGG | 0.390683 | 4.2:+50109275 | None:intergenic |
| CTCAAACGGATTTCCTCATT+AGG | 0.395608 | 4.2:+50110233 | None:intergenic |
| TCCTTTGGAGGGATTGGTTG+AGG | 0.396684 | 4.2:+50110630 | None:intergenic |
| TAGCTGGTGCTAACTCAATC+AGG | 0.398116 | 4.2:-50106779 | MS.gene98667:CDS |
| TGAAAGATCTCTCAACTGTT+GGG | 0.401395 | 4.2:+50106686 | None:intergenic |
| GAATCATTCCACTTAAACAT+TGG | 0.404643 | 4.2:+50107611 | None:intergenic |
| CTAAATACCTGGATTCTTGA+TGG | 0.405744 | 4.2:+50109426 | None:intergenic |
| AAACCGTTGGTCTTTGTGGT+TGG | 0.408501 | 4.2:-50110559 | MS.gene98667:CDS |
| GATCCACACCAGAAGGTTCC+CGG | 0.409313 | 4.2:-50109461 | MS.gene98667:CDS |
| AACCGTTGGTCTTTGTGGTT+GGG | 0.417606 | 4.2:-50110558 | MS.gene98667:CDS |
| CCGACTTTCCAATGTTTAAG+TGG | 0.418645 | 4.2:-50107619 | MS.gene98667:CDS |
| TGCTTCAGCATATGTAAGCC+TGG | 0.420918 | 4.2:+50108513 | None:intergenic |
| GATATTTAAGCAAATGCTAA+TGG | 0.421115 | 4.2:-50109261 | MS.gene98667:CDS |
| GCTGAAGCAATGAATAGATA+TGG | 0.425444 | 4.2:-50108499 | MS.gene98667:CDS |
| TTGATGGAACTAAATATTCC+CGG | 0.426697 | 4.2:+50109442 | None:intergenic |
| TAAACGCGACATACAACAAA+AGG | 0.428071 | 4.2:-50107243 | MS.gene98667:CDS |
| CTTTGGAGGGATTGGTTGAG+GGG | 0.428427 | 4.2:+50110632 | None:intergenic |
| CCTTTGGAGGGATTGGTTGA+GGG | 0.435209 | 4.2:+50110631 | None:intergenic |
| CCTTGCATCGGCTCGTGCAT+TGG | 0.439535 | 4.2:-50107417 | MS.gene98667:CDS |
| GTAAGCCTGGGGAAAGGGTT+TGG | 0.441264 | 4.2:+50108526 | None:intergenic |
| CACACAACTGGATATGGAAA+TGG | 0.444801 | 4.2:-50108978 | MS.gene98667:CDS |
| AATCCCTCCAAAGGATTTCA+AGG | 0.446071 | 4.2:-50110622 | MS.gene98667:CDS |
| ATACTTTATGTCAGATTGGT+GGG | 0.446432 | 4.2:-50107283 | MS.gene98667:intron |
| CTCATATATTGATGTTTACA+AGG | 0.452540 | 4.2:-50108089 | MS.gene98667:CDS |
| CATTATCTTTGATGTCCATT+CGG | 0.455183 | 4.2:-50110748 | MS.gene98667:CDS |
| GAGTATGTGGCTGCCATTCA+AGG | 0.455865 | 4.2:-50110407 | MS.gene98667:CDS |
| ACTAAGGCTATTACCTCAAA+CGG | 0.457448 | 4.2:+50110219 | None:intergenic |
| AGACCTAACAACACCTTGAA+TGG | 0.460253 | 4.2:+50110394 | None:intergenic |
| ATCAACTACGAGATGAAAAC+CGG | 0.461565 | 4.2:-50110356 | MS.gene98667:CDS |
| TTGTTAAGGCGATGCTCTGC+GGG | 0.461752 | 4.2:-50107869 | MS.gene98667:CDS |
| AAAGTATTGTGTGTACCTTC+TGG | 0.462564 | 4.2:-50108124 | MS.gene98667:CDS |
| AATCCACAAAATTGAATGCT+TGG | 0.462581 | 4.2:+50107643 | None:intergenic |
| GGTAAAACCGTTGGTCTTTG+TGG | 0.463265 | 4.2:-50110563 | MS.gene98667:CDS |
| ACAACCTGAGTTCACACAAC+TGG | 0.465678 | 4.2:-50108990 | MS.gene98667:CDS |
| AAGCAAATGCTAATGGTAGC+TGG | 0.467850 | 4.2:-50109254 | MS.gene98667:CDS |
| CATCGAGGTTGCTGCAAATG+AGG | 0.476333 | 4.2:-50110330 | MS.gene98667:CDS |
| TTGAAAGATCTCTCAACTGT+TGG | 0.477269 | 4.2:+50106685 | None:intergenic |
| CATATGTAAGCCTGGGGAAA+GGG | 0.478597 | 4.2:+50108521 | None:intergenic |
| AGGTCATCTTAGAGTTTATG+TGG | 0.489822 | 4.2:-50107789 | MS.gene98667:CDS |
| AGCAATGAATAGATATGGTT+CGG | 0.498070 | 4.2:-50108494 | MS.gene98667:CDS |
| AGCATTTGCTTAAATATCTG+AGG | 0.502288 | 4.2:+50109266 | None:intergenic |
| TTCTTGAAGCTCTTGACATG+GGG | 0.505034 | 4.2:-50107043 | MS.gene98667:CDS |
| GGAATCAGAGAAAATCTTGA+AGG | 0.507807 | 4.2:+50108168 | None:intergenic |
| CTAATGAGGAAATCCGTTTG+AGG | 0.507985 | 4.2:-50110232 | MS.gene98667:intron |
| TATACTTTATGTCAGATTGG+TGG | 0.511613 | 4.2:-50107284 | MS.gene98667:intron |
| TCTGATTCCTTGGAGTGTGG+TGG | 0.511716 | 4.2:-50108154 | MS.gene98667:CDS |
| TTCAAAACAGAATGTGCGAC+TGG | 0.514628 | 4.2:+50110443 | None:intergenic |
| TTCTCTGATTCCTTGGAGTG+TGG | 0.517839 | 4.2:-50108157 | MS.gene98667:CDS |
| TGAGACTCTAGGCATCTCAA+TGG | 0.517904 | 4.2:-50107216 | MS.gene98667:CDS |
| ACTTTATGTCAGATTGGTGG+GGG | 0.518977 | 4.2:-50107281 | MS.gene98667:intron |
| TTTAGTTCCATCAAGAATCC+AGG | 0.519530 | 4.2:-50109433 | MS.gene98667:intron |
| AAACCTAAAACGCGAGTATG+TGG | 0.521562 | 4.2:-50110420 | MS.gene98667:CDS |
| TGCAGCAACCTCGATGAAGC+CGG | 0.521630 | 4.2:+50110337 | None:intergenic |
| AAGGGATGGGCTTCGCCGAA+TGG | 0.522273 | 4.2:+50110733 | None:intergenic |
| TCAGGATTTGGTGCAGTGAA+AGG | 0.522281 | 4.2:+50107452 | None:intergenic |
| GATGAAGATTTAAGAGCTGA+TGG | 0.524906 | 4.2:-50109013 | MS.gene98667:CDS |
| GTTGAAACTCCGATACTGTC+AGG | 0.524927 | 4.2:-50109483 | MS.gene98667:CDS |
| CAACTAGAGAGGAATTGTTA+AGG | 0.525367 | 4.2:-50107883 | MS.gene98667:CDS |
| TCGTGCATTGGCTTATGACA+TGG | 0.525618 | 4.2:-50107405 | MS.gene98667:CDS |
| GCATCTGTAAATAAAACTCT+AGG | 0.526215 | 4.2:-50107809 | MS.gene98667:CDS |
| AGAGACAACATATCCTCTAA+AGG | 0.530071 | 4.2:+50108947 | None:intergenic |
| TACTTTATGTCAGATTGGTG+GGG | 0.532670 | 4.2:-50107282 | MS.gene98667:intron |
| GCATATGTAAGCCTGGGGAA+AGG | 0.533395 | 4.2:+50108520 | None:intergenic |
| GCTTCAGCATATGTAAGCCT+GGG | 0.534696 | 4.2:+50108514 | None:intergenic |
| AGATTGGTTATGTTGCTAGC+TGG | 0.540261 | 4.2:-50106795 | MS.gene98667:CDS |
| TCGTAGTTGATTGATTGAGT+TGG | 0.540347 | 4.2:+50110368 | None:intergenic |
| CTTCTTGAAGCTCTTGACAT+GGG | 0.540430 | 4.2:-50107044 | MS.gene98667:CDS |
| TAACGAAGAGTTGATCAGAA+AGG | 0.542839 | 4.2:-50108924 | MS.gene98667:intron |
| TCTAGGCATCTCAATGGAGC+AGG | 0.544124 | 4.2:-50107210 | MS.gene98667:intron |
| AGAAATAAAATCAGATCACT+TGG | 0.550451 | 4.2:+50107845 | None:intergenic |
| AATTACCAAACCCTTTCCCC+AGG | 0.550475 | 4.2:-50108531 | MS.gene98667:CDS |
| GAGTCCTTGAAATCCTTTGG+AGG | 0.550853 | 4.2:+50110618 | None:intergenic |
| CCACTTAAACATTGGAAAGT+CGG | 0.551196 | 4.2:+50107619 | None:intergenic |
| GTGGTCTCTAAGAATGAGAA+TGG | 0.554413 | 4.2:+50110505 | None:intergenic |
| TGATGGAACTAAATATTCCC+GGG | 0.556444 | 4.2:+50109443 | None:intergenic |
| ATAAATATTATCAAGTAGCA+AGG | 0.559397 | 4.2:-50109226 | MS.gene98667:intron |
| GAATTATCTTCCAACGATGT+CGG | 0.563139 | 4.2:-50110584 | MS.gene98667:CDS |
| GCATTTGCTTAAATATCTGA+GGG | 0.563732 | 4.2:+50109267 | None:intergenic |
| AGTCCTTGAAATCCTTTGGA+GGG | 0.564025 | 4.2:+50110619 | None:intergenic |
| TGCAGAAGGTTCTCCTAATG+AGG | 0.564632 | 4.2:-50110246 | MS.gene98667:CDS |
| CCAATGCACGAGCCGATGCA+AGG | 0.567886 | 4.2:+50107417 | None:intergenic |
| ATCCACACCAGAAGGTTCCC+GGG | 0.568788 | 4.2:-50109460 | MS.gene98667:CDS |
| TATCTGAGGGCTTTGTGGCA+AGG | 0.571416 | 4.2:+50109280 | None:intergenic |
| ATATCCAGTTGTGTGAACTC+AGG | 0.571872 | 4.2:+50108986 | None:intergenic |
| TGTAATAACCTGAATAATGC+CGG | 0.574422 | 4.2:+50110481 | None:intergenic |
| TTGAATTCTGACGATGCAGA+AGG | 0.579422 | 4.2:-50110260 | MS.gene98667:CDS |
| GAAAGATCTCTCAACTGTTG+GGG | 0.580819 | 4.2:+50106687 | None:intergenic |
| GTTGAACTTCACAGACGCTA+CGG | 0.581291 | 4.2:-50110536 | MS.gene98667:CDS |
| TTCCCGGGAACCTTCTGGTG+TGG | 0.588579 | 4.2:+50109458 | None:intergenic |
| AATAACTCCACCACACTCCA+AGG | 0.590280 | 4.2:+50108147 | None:intergenic |
| GGTGTGGATCCTGACAGTAT+CGG | 0.591755 | 4.2:+50109474 | None:intergenic |
| TGTTGGGGATCCACCTCGGA+AGG | 0.594024 | 4.2:+50106702 | None:intergenic |
| AACGATGTCGGTAAAACCGT+TGG | 0.595077 | 4.2:-50110572 | MS.gene98667:CDS |
| TCTTCTTGAAGCTCTTGACA+TGG | 0.595100 | 4.2:-50107045 | MS.gene98667:CDS |
| CCCTCAACCAATCCCTCCAA+AGG | 0.597723 | 4.2:-50110631 | MS.gene98667:CDS |
| CCTCGGAAGGTGATCTCGTG+AGG | 0.598148 | 4.2:+50106715 | None:intergenic |
| CACGAGATCACCTTCCGAGG+TGG | 0.609144 | 4.2:-50106712 | MS.gene98667:CDS |
| GATCAAATCTGGTATCTGGA+TGG | 0.616984 | 4.2:+50108470 | None:intergenic |
| TCTTGAAGCTCTTGACATGG+GGG | 0.620703 | 4.2:-50107042 | MS.gene98667:CDS |
| CTGTCAGGATCCACACCAGA+AGG | 0.620847 | 4.2:-50109468 | MS.gene98667:CDS |
| TATGGATTCTGCAACTAGAG+AGG | 0.622469 | 4.2:-50107894 | MS.gene98667:CDS |
| CAACTGTTGGGGATCCACCT+CGG | 0.622868 | 4.2:+50106698 | None:intergenic |
| AACCCAACCACAAAGACCAA+CGG | 0.622890 | 4.2:+50110556 | None:intergenic |
| CATGTTGCTGCGGCATAATG+TGG | 0.628032 | 4.2:-50109661 | MS.gene98667:CDS |
| AGTGGAATGATTCGAAGCAG+AGG | 0.628354 | 4.2:-50107601 | MS.gene98667:CDS |
| TGATTCGAAGCAGAGGCTTG+AGG | 0.628865 | 4.2:-50107594 | MS.gene98667:intron |
| GAGTACTTCGCTGCACCAGA+AGG | 0.631053 | 4.2:+50108109 | None:intergenic |
| AGACATGAACAACCTTGCAT+CGG | 0.632479 | 4.2:-50107429 | MS.gene98667:CDS |
| ATTGTTAAGGCGATGCTCTG+CGG | 0.643730 | 4.2:-50107870 | MS.gene98667:CDS |
| CTCGGAAGGTGATCTCGTGA+GGG | 0.643918 | 4.2:+50106716 | None:intergenic |
| AGCTGGTGCTAACTCAATCA+GGG | 0.644352 | 4.2:-50106778 | MS.gene98667:CDS |
| TTAGAAGACTTACCATGTGG+CGG | 0.647061 | 4.2:+50107017 | None:intergenic |
| AGATCTTTCAATCACTACAC+AGG | 0.653057 | 4.2:-50106673 | MS.gene98667:CDS |
| CCTCACGAGATCACCTTCCG+AGG | 0.653984 | 4.2:-50106715 | MS.gene98667:CDS |
| CTTTATGTCAGATTGGTGGG+GGG | 0.671478 | 4.2:-50107280 | MS.gene98667:intron |
| TGAATTCTAACATGTTGCTG+CGG | 0.674898 | 4.2:-50109671 | MS.gene98667:CDS |
| TAACCTGAATAATGCCGGTG+TGG | 0.675393 | 4.2:+50110486 | None:intergenic |
| GATGAAAACCGGCTTCATCG+AGG | 0.686739 | 4.2:-50110345 | MS.gene98667:CDS |
| CTTCAGCATATGTAAGCCTG+GGG | 0.689625 | 4.2:+50108515 | None:intergenic |
| AGATATCTAGAAGACATACA+TGG | 0.691076 | 4.2:-50109624 | MS.gene98667:CDS |
| GAACTTCACAGACGCTACGG+TGG | 0.691527 | 4.2:-50110533 | MS.gene98667:CDS |
| CTCATTCTTAGAGACCACAC+CGG | 0.705982 | 4.2:-50110500 | MS.gene98667:CDS |
| ATTTCAAGGACTCATCATTG+CGG | 0.709140 | 4.2:-50110608 | MS.gene98667:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAGTGAAATAAATAA+TGG | + | chr4.2:50109738-50109757 | None:intergenic | 10.0% |
| !! | TTAAATTTCAAATGAAAATA+TGG | + | chr4.2:50110513-50110532 | None:intergenic | 10.0% |
| !!! | TTTATTAAGAATTACATTTT+TGG | + | chr4.2:50109883-50109902 | None:intergenic | 10.0% |
| !!! | TTTTCATTATTCTTAATTAT+GGG | - | chr4.2:50109933-50109952 | MS.gene98667:intron | 10.0% |
| !! | AAAATGAATATGATTATAGA+TGG | + | chr4.2:50108541-50108560 | None:intergenic | 15.0% |
| !! | AAATTACATTAAAAAGATTG+TGG | - | chr4.2:50108371-50108390 | MS.gene98667:intron | 15.0% |
| !! | AATAGTAGTAAAATTTAGAA+TGG | - | chr4.2:50108595-50108614 | MS.gene98667:intron | 15.0% |
| !! | AGGAAAAATATAAATTGAAA+TGG | - | chr4.2:50108727-50108746 | MS.gene98667:intron | 15.0% |
| !! | GGAAAAATATAAATTGAAAT+GGG | - | chr4.2:50108728-50108747 | MS.gene98667:intron | 15.0% |
| !! | TAATACTAAAATCAATCATT+TGG | + | chr4.2:50107535-50107554 | None:intergenic | 15.0% |
| !! | TCTTGTAAATAATTTACAAT+TGG | + | chr4.2:50107667-50107686 | None:intergenic | 15.0% |
| !! | TGTTATTATATATCAAATAC+AGG | - | chr4.2:50110589-50110608 | MS.gene98667:CDS | 15.0% |
| !! | TTCTTAATAAATAAGTTATC+TGG | - | chr4.2:50109892-50109911 | MS.gene98667:intron | 15.0% |
| !!! | ATTTTCATTTGAAATTTAAC+CGG | - | chr4.2:50110514-50110533 | MS.gene98667:CDS | 15.0% |
| !!! | CAATCTTTTTAATGTAATTT+TGG | + | chr4.2:50108371-50108390 | None:intergenic | 15.0% |
| !!! | CTTTTCATTATTCTTAATTA+TGG | - | chr4.2:50109932-50109951 | MS.gene98667:intron | 15.0% |
| !!! | GTTATTTTTGTTTGAATTTT+AGG | - | chr4.2:50109763-50109782 | MS.gene98667:intron | 15.0% |
| !! | AAATATAAATTGAAATGGGA+AGG | - | chr4.2:50108732-50108751 | MS.gene98667:intron | 20.0% |
| !! | ACTTTACATTCATAAAACTA+AGG | + | chr4.2:50107229-50107248 | None:intergenic | 20.0% |
| !! | ATAAATATTATCAAGTAGCA+AGG | - | chr4.2:50108203-50108222 | MS.gene98667:intron | 20.0% |
| !! | ATAATTCAATTTATCGACAA+GGG | + | chr4.2:50110460-50110479 | None:intergenic | 20.0% |
| !! | TACTTACAATTACAAACTTT+AGG | - | chr4.2:50107704-50107723 | MS.gene98667:intron | 20.0% |
| !! | TATTATACTTTATGTCAGAT+TGG | - | chr4.2:50110142-50110161 | MS.gene98667:intron | 20.0% |
| !! | TATTATATATCAAATACAGG+AGG | - | chr4.2:50110592-50110611 | MS.gene98667:CDS | 20.0% |
| !! | TATTTCCAAAATATAAGGAA+TGG | + | chr4.2:50110260-50110279 | None:intergenic | 20.0% |
| !! | TGTAAATAATTTACAATTGG+AGG | + | chr4.2:50107664-50107683 | None:intergenic | 20.0% |
| !! | TTTAGTATTAATTCCTTGTT+TGG | - | chr4.2:50107545-50107564 | MS.gene98667:intron | 20.0% |
| !!! | AACATAAATGCTTTTTCTAT+GGG | + | chr4.2:50108319-50108338 | None:intergenic | 20.0% |
| !!! | ATTCCTTATATTTTGGAAAT+AGG | - | chr4.2:50110259-50110278 | MS.gene98667:CDS | 20.0% |
| !!! | ATTTGAGTTTATTTGTATCT+TGG | - | chr4.2:50108254-50108273 | MS.gene98667:intron | 20.0% |
| !!! | GATAAAATTGAGTATTGATA+GGG | + | chr4.2:50109426-50109445 | None:intergenic | 20.0% |
| !!! | TAACATAAATGCTTTTTCTA+TGG | + | chr4.2:50108320-50108339 | None:intergenic | 20.0% |
| !!! | TAGGTTTTTCTTGAAATTAA+GGG | - | chr4.2:50108870-50108889 | MS.gene98667:intron | 20.0% |
| !!! | TCTTTACCTTTTTGTTTATA+AGG | - | chr4.2:50107920-50107939 | MS.gene98667:CDS | 20.0% |
| !!! | TGAGATATTAACTTTTTCAT+TGG | - | chr4.2:50109207-50109226 | MS.gene98667:intron | 20.0% |
| !!! | TGATAAAATTGAGTATTGAT+AGG | + | chr4.2:50109427-50109446 | None:intergenic | 20.0% |
| !!! | TGCATTATAATTTCTTTTTC+AGG | - | chr4.2:50110342-50110361 | MS.gene98667:CDS | 20.0% |
| !!! | TTCCTTATATTTTGGAAATA+GGG | - | chr4.2:50110260-50110279 | MS.gene98667:CDS | 20.0% |
| !!! | TTTTAATTCTAGATCAAATC+TGG | + | chr4.2:50108973-50108992 | None:intergenic | 20.0% |
| !!! | TTTTATCAAGTTTAATGATG+TGG | - | chr4.2:50107584-50107603 | MS.gene98667:intron | 20.0% |
| ! | AACCTACCTTATAAACAAAA+AGG | + | chr4.2:50107929-50107948 | None:intergenic | 25.0% |
| ! | AAGGATTACACAATAAACAA+AGG | + | chr4.2:50109475-50109494 | None:intergenic | 25.0% |
| ! | AAGTTTGTAATGTCTATGTA+AGG | - | chr4.2:50107314-50107333 | MS.gene98667:intron | 25.0% |
| ! | ACATCAAAGATAATGCTTTA+AGG | + | chr4.2:50106676-50106695 | None:intergenic | 25.0% |
| ! | AGAAATAAAATCAGATCACT+TGG | + | chr4.2:50109587-50109606 | None:intergenic | 25.0% |
| ! | CTCATATATTGATGTTTACA+AGG | - | chr4.2:50109340-50109359 | MS.gene98667:intron | 25.0% |
| ! | GACATTACAAACTTTAACAA+AGG | + | chr4.2:50107308-50107327 | None:intergenic | 25.0% |
| ! | GATAATTCAATTTATCGACA+AGG | + | chr4.2:50110461-50110480 | None:intergenic | 25.0% |
| ! | GATATTTAAGCAAATGCTAA+TGG | - | chr4.2:50108168-50108187 | MS.gene98667:CDS | 25.0% |
| ! | TACCCTATTTCCAAAATATA+AGG | + | chr4.2:50110265-50110284 | None:intergenic | 25.0% |
| ! | TTCTCATTTGATATAGCTTA+CGG | - | chr4.2:50109026-50109045 | MS.gene98667:CDS | 25.0% |
| ! | TTTCCAATACTTCAAATTTG+TGG | + | chr4.2:50108566-50108585 | None:intergenic | 25.0% |
| !! | AAATTTAGAATGGAGGAATA+AGG | - | chr4.2:50108605-50108624 | MS.gene98667:intron | 25.0% |
| !! | AGTAGTAAAATTTAGAATGG+AGG | - | chr4.2:50108598-50108617 | MS.gene98667:intron | 25.0% |
| !! | CATAATTTTACAACCAAACA+AGG | + | chr4.2:50107561-50107580 | None:intergenic | 25.0% |
| !! | GCTAATTTTGCTAATTTTGT+AGG | - | chr4.2:50108851-50108870 | MS.gene98667:intron | 25.0% |
| !! | GTAGGTTTTTCTTGAAATTA+AGG | - | chr4.2:50108869-50108888 | MS.gene98667:intron | 25.0% |
| !! | TATCCACAAATTTGAAGTAT+TGG | - | chr4.2:50108560-50108579 | MS.gene98667:intron | 25.0% |
| !! | TGCTTTTCATCTTAACAAAA+AGG | + | chr4.2:50108036-50108055 | None:intergenic | 25.0% |
| !! | TTTGAAATTGATTGCTTCTT+TGG | + | chr4.2:50106768-50106787 | None:intergenic | 25.0% |
| !!! | AATCCTTTGATTTTAGGTAT+TGG | - | chr4.2:50109488-50109507 | MS.gene98667:intron | 25.0% |
| !!! | ATCCTTTGATTTTAGGTATT+GGG | - | chr4.2:50109489-50109508 | MS.gene98667:intron | 25.0% |
| !!! | TAAAGTTACCATTTTTTCAC+TGG | - | chr4.2:50107243-50107262 | MS.gene98667:CDS | 25.0% |
| !!! | TACCTTTTTGTTTATAAGGT+AGG | - | chr4.2:50107924-50107943 | MS.gene98667:CDS | 25.0% |
| !!! | TTGTGTAATCCTTTGATTTT+AGG | - | chr4.2:50109482-50109501 | MS.gene98667:CDS | 25.0% |
| AAACTTGATTTCAAGCTTCA+AGG | + | chr4.2:50107407-50107426 | None:intergenic | 30.0% | |
| AAGACATGAAATTATACGAG+AGG | + | chr4.2:50109007-50109026 | None:intergenic | 30.0% | |
| AAGGTTAAGATCTAAATACC+TGG | + | chr4.2:50108017-50108036 | None:intergenic | 30.0% | |
| AATCCACAAAATTGAATGCT+TGG | + | chr4.2:50109789-50109808 | None:intergenic | 30.0% | |
| AATTCAAATGATGAACCTAC+TGG | + | chr4.2:50107848-50107867 | None:intergenic | 30.0% | |
| AGATATCTAGAAGACATACA+TGG | - | chr4.2:50107805-50107824 | MS.gene98667:CDS | 30.0% | |
| AGCAATGAATAGATATGGTT+CGG | - | chr4.2:50108935-50108954 | MS.gene98667:CDS | 30.0% | |
| AGCATTTGCTTAAATATCTG+AGG | + | chr4.2:50108166-50108185 | None:intergenic | 30.0% | |
| ATACTTTATGTCAGATTGGT+GGG | - | chr4.2:50110146-50110165 | MS.gene98667:intron | 30.0% | |
| CAAAATATAAGGAATGGAGT+CGG | + | chr4.2:50110254-50110273 | None:intergenic | 30.0% | |
| CATTATCTTTGATGTCCATT+CGG | - | chr4.2:50106681-50106700 | MS.gene98667:CDS | 30.0% | |
| CGAATCATGCATGTATATTA+TGG | - | chr4.2:50108829-50108848 | MS.gene98667:intron | 30.0% | |
| CTTACTTACCAGTGAAAAAA+TGG | + | chr4.2:50107254-50107273 | None:intergenic | 30.0% | |
| GAATCATTCCACTTAAACAT+TGG | + | chr4.2:50109821-50109840 | None:intergenic | 30.0% | |
| GCATCTGTAAATAAAACTCT+AGG | - | chr4.2:50109620-50109639 | MS.gene98667:CDS | 30.0% | |
| GCATTTGCTTAAATATCTGA+GGG | + | chr4.2:50108165-50108184 | None:intergenic | 30.0% | |
| GTTTATGTGGCACAAAAATT+AGG | - | chr4.2:50109653-50109672 | MS.gene98667:CDS | 30.0% | |
| TACAAGGAAGCAGAAAAATA+TGG | - | chr4.2:50109356-50109375 | MS.gene98667:intron | 30.0% | |
| TATACTTTATGTCAGATTGG+TGG | - | chr4.2:50110145-50110164 | MS.gene98667:intron | 30.0% | |
| TGTAATAACCTGAATAATGC+CGG | + | chr4.2:50106951-50106970 | None:intergenic | 30.0% | |
| TGTTTGATATATATCCTCTG+TGG | - | chr4.2:50108774-50108793 | MS.gene98667:intron | 30.0% | |
| TTGAAGCTTGAAATCAAGTT+TGG | - | chr4.2:50107406-50107425 | MS.gene98667:CDS | 30.0% | |
| TTGATGGAACTAAATATTCC+CGG | + | chr4.2:50107990-50108009 | None:intergenic | 30.0% | |
| TTGTATCTTGGCTTATGTTA+TGG | - | chr4.2:50108266-50108285 | MS.gene98667:intron | 30.0% | |
| ! | ACATGGTAAGTCTTCTAAAA+TGG | - | chr4.2:50110417-50110436 | MS.gene98667:CDS | 30.0% |
| ! | AGTTTTTATTCGTGTAAACC+AGG | - | chr4.2:50109080-50109099 | MS.gene98667:intron | 30.0% |
| ! | CATGCATGATTCGATTTTTA+TGG | + | chr4.2:50108822-50108841 | None:intergenic | 30.0% |
| ! | GTGCATTTTGTAGATGTTTT+CGG | - | chr4.2:50108393-50108412 | MS.gene98667:intron | 30.0% |
| ! | TGCATTTTGTAGATGTTTTC+GGG | - | chr4.2:50108394-50108413 | MS.gene98667:intron | 30.0% |
| ! | TGGGTTTAAGCTTTTTGTAA+GGG | + | chr4.2:50106742-50106761 | None:intergenic | 30.0% |
| ! | TTCTGCTTTAGTTTCAAGTA+TGG | - | chr4.2:50109517-50109536 | MS.gene98667:intron | 30.0% |
| ! | TTGGGTTTAAGCTTTTTGTA+AGG | + | chr4.2:50106743-50106762 | None:intergenic | 30.0% |
| ! | TTGTAAGGGAGATGTATTTT+GGG | + | chr4.2:50106728-50106747 | None:intergenic | 30.0% |
| ! | TTTGTAAGGGAGATGTATTT+TGG | + | chr4.2:50106729-50106748 | None:intergenic | 30.0% |
| ! | TTTGTAAGGTATCCATATCT+AGG | - | chr4.2:50107348-50107367 | MS.gene98667:intron | 30.0% |
| ! | TTTTCTTGAAATTAAGGGTG+TGG | - | chr4.2:50108875-50108894 | MS.gene98667:intron | 30.0% |
| !! | ATTGATTGCTTCTTTGGTTT+TGG | + | chr4.2:50106762-50106781 | None:intergenic | 30.0% |
| !! | ATTTTAGAAGACTTACCATG+TGG | + | chr4.2:50110418-50110437 | None:intergenic | 30.0% |
| !! | GATCTGATTTTATTTCTTGC+TGG | - | chr4.2:50109590-50109609 | MS.gene98667:intron | 30.0% |
| !! | TCCTTTGATTTTAGGTATTG+GGG | - | chr4.2:50109490-50109509 | MS.gene98667:intron | 30.0% |
| !!! | ATGCTTTTTCTATGGGAAAA+AGG | + | chr4.2:50108312-50108331 | None:intergenic | 30.0% |
| !!! | TGCTTTTTCTATGGGAAAAA+GGG | + | chr4.2:50108311-50108330 | None:intergenic | 30.0% |
| !!! | TTGATTGCTTCTTTGGTTTT+GGG | + | chr4.2:50106761-50106780 | None:intergenic | 30.0% |
| ACTAAGGCTATTACCTCAAA+CGG | + | chr4.2:50107213-50107232 | None:intergenic | 35.0% | |
| AGAGACAACATATCCTCTAA+AGG | + | chr4.2:50108485-50108504 | None:intergenic | 35.0% | |
| AGATCTTTCAATCACTACAC+AGG | - | chr4.2:50110756-50110775 | MS.gene98667:CDS | 35.0% | |
| AGCAGAAAAATATGGTGCAA+AGG | - | chr4.2:50109364-50109383 | MS.gene98667:intron | 35.0% | |
| AGGTCATCTTAGAGTTTATG+TGG | - | chr4.2:50109640-50109659 | MS.gene98667:CDS | 35.0% | |
| AGGTTCAAGAGTTGAATTCT+AGG | - | chr4.2:50107119-50107138 | MS.gene98667:intron | 35.0% | |
| ATATATATCCTCTGTGGACA+TGG | - | chr4.2:50108780-50108799 | MS.gene98667:intron | 35.0% | |
| ATCAACTACGAGATGAAAAC+CGG | - | chr4.2:50107073-50107092 | MS.gene98667:intron | 35.0% | |
| ATTCAATTTATCGACAAGGG+AGG | + | chr4.2:50110457-50110476 | None:intergenic | 35.0% | |
| ATTTCAAGGACTCATCATTG+CGG | - | chr4.2:50106821-50106840 | MS.gene98667:CDS | 35.0% | |
| CAAAGGGTTTACTTACTCTT+TGG | - | chr4.2:50109381-50109400 | MS.gene98667:intron | 35.0% | |
| CAACTAGAGAGGAATTGTTA+AGG | - | chr4.2:50109546-50109565 | MS.gene98667:intron | 35.0% | |
| CCACTTAAACATTGGAAAGT+CGG | + | chr4.2:50109813-50109832 | None:intergenic | 35.0% | |
| CTAAATACCTGGATTCTTGA+TGG | + | chr4.2:50108006-50108025 | None:intergenic | 35.0% | |
| CTTGAAATCAAGTTTGGAAG+TGG | - | chr4.2:50107412-50107431 | MS.gene98667:CDS | 35.0% | |
| GAATTATCTTCCAACGATGT+CGG | - | chr4.2:50106845-50106864 | MS.gene98667:intron | 35.0% | |
| GATGAAGATTTAAGAGCTGA+TGG | - | chr4.2:50108416-50108435 | MS.gene98667:intron | 35.0% | |
| GCAAATCTAGGTAAACTCTT+AGG | + | chr4.2:50109177-50109196 | None:intergenic | 35.0% | |
| GCAGAAAAATATGGTGCAAA+GGG | - | chr4.2:50109365-50109384 | MS.gene98667:intron | 35.0% | |
| GCATCGTCAGAATTCAATTT+AGG | + | chr4.2:50107166-50107185 | None:intergenic | 35.0% | |
| GCTGAAGCAATGAATAGATA+TGG | - | chr4.2:50108930-50108949 | MS.gene98667:CDS | 35.0% | |
| GGAATCAGAGAAAATCTTGA+AGG | + | chr4.2:50109264-50109283 | None:intergenic | 35.0% | |
| GGTTAATTCCTTGCTTTCTA+AGG | - | chr4.2:50107433-50107452 | MS.gene98667:CDS | 35.0% | |
| GTATCAGTCGCAAAATTGTA+AGG | + | chr4.2:50110116-50110135 | None:intergenic | 35.0% | |
| GTGTTCAAATGAAGATACAC+CGG | + | chr4.2:50110536-50110555 | None:intergenic | 35.0% | |
| TAAACGCGACATACAACAAA+AGG | - | chr4.2:50110186-50110205 | MS.gene98667:intron | 35.0% | |
| TACTTTATGTCAGATTGGTG+GGG | - | chr4.2:50110147-50110166 | MS.gene98667:intron | 35.0% | |
| TATGGATACCTTACAAAGCA+AGG | + | chr4.2:50107345-50107364 | None:intergenic | 35.0% | |
| TCGTAGTTGATTGATTGAGT+TGG | + | chr4.2:50107064-50107083 | None:intergenic | 35.0% | |
| TCTAGATCAAATCTGGTATC+TGG | + | chr4.2:50108966-50108985 | None:intergenic | 35.0% | |
| TCTTAATTATGGGATTGTGC+AGG | - | chr4.2:50109943-50109962 | MS.gene98667:intron | 35.0% | |
| TGAAAGATCTCTCAACTGTT+GGG | + | chr4.2:50110746-50110765 | None:intergenic | 35.0% | |
| TGAATTCTAACATGTTGCTG+CGG | - | chr4.2:50107758-50107777 | MS.gene98667:intron | 35.0% | |
| TGATGGAACTAAATATTCCC+GGG | + | chr4.2:50107989-50108008 | None:intergenic | 35.0% | |
| TGCTGAAACATGTTTGATTG+CGG | - | chr4.2:50107617-50107636 | MS.gene98667:CDS | 35.0% | |
| TTAAATATCTGAGGGCTTTG+TGG | + | chr4.2:50108157-50108176 | None:intergenic | 35.0% | |
| TTGAAAGATCTCTCAACTGT+TGG | + | chr4.2:50110747-50110766 | None:intergenic | 35.0% | |
| TTGTTCATGTCTTCAGGATT+TGG | + | chr4.2:50109992-50110011 | None:intergenic | 35.0% | |
| TTTGCAGTCTCACTTATTTC+AGG | - | chr4.2:50108707-50108726 | MS.gene98667:intron | 35.0% | |
| ! | AATGGCTTTTACTCCTTTAG+AGG | - | chr4.2:50108469-50108488 | MS.gene98667:CDS | 35.0% |
| ! | AGGTATCTGACATTTTCTCA+GGG | - | chr4.2:50109234-50109253 | MS.gene98667:CDS | 35.0% |
| ! | AGTTGCTCTATAACTGCTTT+TGG | - | chr4.2:50107492-50107511 | MS.gene98667:intron | 35.0% |
| ! | CAAGATTTTCTCTGATTCCT+TGG | - | chr4.2:50109265-50109284 | MS.gene98667:CDS | 35.0% |
| ! | CATTCAGTCATGGTTTTTCA+TGG | - | chr4.2:50107279-50107298 | MS.gene98667:intron | 35.0% |
| ! | CGACTCCATTCCTTATATTT+TGG | - | chr4.2:50110252-50110271 | MS.gene98667:CDS | 35.0% |
| ! | CTTATGACATGGTTTTCAAC+GGG | - | chr4.2:50110035-50110054 | MS.gene98667:intron | 35.0% |
| ! | GCTTATGACATGGTTTTCAA+CGG | - | chr4.2:50110034-50110053 | MS.gene98667:intron | 35.0% |
| ! | GTACTTTGATTGTTGGTGTT+TGG | - | chr4.2:50107884-50107903 | MS.gene98667:CDS | 35.0% |
| ! | TAACGAAGAGTTGATCAGAA+AGG | - | chr4.2:50108505-50108524 | MS.gene98667:CDS | 35.0% |
| ! | TTATGACATGGTTTTCAACG+GGG | - | chr4.2:50110036-50110055 | MS.gene98667:intron | 35.0% |
| ! | TTTAGTTCCATCAAGAATCC+AGG | - | chr4.2:50107996-50108015 | MS.gene98667:intron | 35.0% |
| !! | AAAGTATTGTGTGTACCTTC+TGG | - | chr4.2:50109305-50109324 | MS.gene98667:intron | 35.0% |
| !! | AATACAGGAGGCATATCTTT+TGG | - | chr4.2:50110604-50110623 | MS.gene98667:CDS | 35.0% |
| !! | AGAAGACATACATGGTTTTG+TGG | - | chr4.2:50107813-50107832 | MS.gene98667:CDS | 35.0% |
| !!! | ACTGTGCAGTTGTTGTTTTT+GGG | + | chr4.2:50110690-50110709 | None:intergenic | 35.0% |
| !!! | ATCTTTTGGTTTGGACAGAT+TGG | - | chr4.2:50110618-50110637 | MS.gene98667:CDS | 35.0% |
| !!! | ATGTATTTTGGGTTTGCGAA+GGG | + | chr4.2:50106717-50106736 | None:intergenic | 35.0% |
| !!! | CAAAAGGTTTTTGAGACTCT+AGG | - | chr4.2:50110202-50110221 | MS.gene98667:intron | 35.0% |
| !!! | CCTTTGATTTTAGGTATTGG+GGG | - | chr4.2:50109491-50109510 | MS.gene98667:intron | 35.0% |
| !!! | TTAACTTTTTCATTGGCTGC+AGG | - | chr4.2:50109214-50109233 | MS.gene98667:intron | 35.0% |
| AAACCTAAAACGCGAGTATG+TGG | - | chr4.2:50107009-50107028 | MS.gene98667:intron | 40.0% | |
| AAAGCAGATGCCAACTTACA+TGG | + | chr4.2:50109688-50109707 | None:intergenic | 40.0% | |
| AAGCAAATGCTAATGGTAGC+TGG | - | chr4.2:50108175-50108194 | MS.gene98667:CDS | 40.0% | |
| AATCCCTCCAAAGGATTTCA+AGG | - | chr4.2:50106807-50106826 | MS.gene98667:CDS | 40.0% | |
| ACTTTATGTCAGATTGGTGG+GGG | - | chr4.2:50110148-50110167 | MS.gene98667:intron | 40.0% | |
| AGACATGAACAACCTTGCAT+CGG | - | chr4.2:50110000-50110019 | MS.gene98667:intron | 40.0% | |
| AGACCTAACAACACCTTGAA+TGG | + | chr4.2:50107038-50107057 | None:intergenic | 40.0% | |
| AGTCCTTGAAATCCTTTGGA+GGG | + | chr4.2:50106813-50106832 | None:intergenic | 40.0% | |
| ATATCCAGTTGTGTGAACTC+AGG | + | chr4.2:50108446-50108465 | None:intergenic | 40.0% | |
| ATGTAAAACCATGTCCACAG+AGG | + | chr4.2:50108791-50108810 | None:intergenic | 40.0% | |
| ATTTATCGACAAGGGAGGAA+TGG | + | chr4.2:50110452-50110471 | None:intergenic | 40.0% | |
| CACAAACAGTGATTCAACAC+AGG | + | chr4.2:50109056-50109075 | None:intergenic | 40.0% | |
| CACACAACTGGATATGGAAA+TGG | - | chr4.2:50108451-50108470 | MS.gene98667:intron | 40.0% | |
| CAGCAAGATGAAGCAAATCT+AGG | + | chr4.2:50109189-50109208 | None:intergenic | 40.0% | |
| CCCCCAATACCTAAAATCAA+AGG | + | chr4.2:50109494-50109513 | None:intergenic | 40.0% | |
| CCGACTTTCCAATGTTTAAG+TGG | - | chr4.2:50109810-50109829 | MS.gene98667:intron | 40.0% | |
| CTAATGAGGAAATCCGTTTG+AGG | - | chr4.2:50107197-50107216 | MS.gene98667:intron | 40.0% | |
| CTTCTTGAAGCTCTTGACAT+GGG | - | chr4.2:50110385-50110404 | MS.gene98667:CDS | 40.0% | |
| GAAAAACCATGACTGAATGC+TGG | + | chr4.2:50107278-50107297 | None:intergenic | 40.0% | |
| GAAAGATCTCTCAACTGTTG+GGG | + | chr4.2:50110745-50110764 | None:intergenic | 40.0% | |
| GATCAAATCTGGTATCTGGA+TGG | + | chr4.2:50108962-50108981 | None:intergenic | 40.0% | |
| GATGAGTCCTTGAAATCCTT+TGG | + | chr4.2:50106817-50106836 | None:intergenic | 40.0% | |
| GCACATCGTACTTTGATTGT+TGG | - | chr4.2:50107877-50107896 | MS.gene98667:CDS | 40.0% | |
| GTTTGATCGACCATGTAAGT+TGG | - | chr4.2:50109675-50109694 | MS.gene98667:CDS | 40.0% | |
| TATGGACACCTTAGAAAGCA+AGG | + | chr4.2:50107444-50107463 | None:intergenic | 40.0% | |
| TATGGATTCTGCAACTAGAG+AGG | - | chr4.2:50109535-50109554 | MS.gene98667:intron | 40.0% | |
| TCTTCTTGAAGCTCTTGACA+TGG | - | chr4.2:50110384-50110403 | MS.gene98667:CDS | 40.0% | |
| TGAGTTCACACAACTGGATA+TGG | - | chr4.2:50108445-50108464 | MS.gene98667:intron | 40.0% | |
| TGTAAGGCTCGCAAGTTAAA+GGG | + | chr4.2:50110100-50110119 | None:intergenic | 40.0% | |
| TTAGAAGACTTACCATGTGG+CGG | + | chr4.2:50110415-50110434 | None:intergenic | 40.0% | |
| TTCAAAACAGAATGTGCGAC+TGG | + | chr4.2:50106989-50107008 | None:intergenic | 40.0% | |
| TTCTTGAAGCTCTTGACATG+GGG | - | chr4.2:50110386-50110405 | MS.gene98667:CDS | 40.0% | |
| TTGAATTCTGACGATGCAGA+AGG | - | chr4.2:50107169-50107188 | MS.gene98667:intron | 40.0% | |
| TTGTAAGGCTCGCAAGTTAA+AGG | + | chr4.2:50110101-50110120 | None:intergenic | 40.0% | |
| TTTATCGACAAGGGAGGAAT+GGG | + | chr4.2:50110451-50110470 | None:intergenic | 40.0% | |
| ! | AGATTGGTTATGTTGCTAGC+TGG | - | chr4.2:50110634-50110653 | MS.gene98667:CDS | 40.0% |
| ! | AGGCCAAGCATTCAATTTTG+TGG | - | chr4.2:50109783-50109802 | MS.gene98667:intron | 40.0% |
| ! | CAGGTATCTGACATTTTCTC+AGG | - | chr4.2:50109233-50109252 | MS.gene98667:CDS | 40.0% |
| ! | CTCAAACGGATTTCCTCATT+AGG | + | chr4.2:50107199-50107218 | None:intergenic | 40.0% |
| ! | GAAGAGTTGATCAGAAAGGT+TGG | - | chr4.2:50108509-50108528 | MS.gene98667:CDS | 40.0% |
| ! | GTAAGGTATCCATATCTAGG+TGG | - | chr4.2:50107351-50107370 | MS.gene98667:intron | 40.0% |
| ! | GTGGTCTCTAAGAATGAGAA+TGG | + | chr4.2:50106927-50106946 | None:intergenic | 40.0% |
| ! | TTGAAATCCTTTGGAGGGAT+TGG | + | chr4.2:50106808-50106827 | None:intergenic | 40.0% |
| !! | AGGAGGCATATCTTTTGGTT+TGG | - | chr4.2:50110609-50110628 | MS.gene98667:CDS | 40.0% |
| !! | GGTATCGATGTCTTGATCTA+AGG | - | chr4.2:50107725-50107744 | MS.gene98667:intron | 40.0% |
| !!! | AGACATACATGGTTTTGTGG+AGG | - | chr4.2:50107816-50107835 | MS.gene98667:CDS | 40.0% |
| !!! | CACTGTGCAGTTGTTGTTTT+TGG | + | chr4.2:50110691-50110710 | None:intergenic | 40.0% |
| !!! | GATGTATTTTGGGTTTGCGA+AGG | + | chr4.2:50106718-50106737 | None:intergenic | 40.0% |
| AAATATTCCCGGGAACCTTC+TGG | + | chr4.2:50107979-50107998 | None:intergenic | 45.0% | |
| AACCCAACCACAAAGACCAA+CGG | + | chr4.2:50106876-50106895 | None:intergenic | 45.0% | |
| AACGATGTCGGTAAAACCGT+TGG | - | chr4.2:50106857-50106876 | MS.gene98667:intron | 45.0% | |
| AATAACTCCACCACACTCCA+AGG | + | chr4.2:50109285-50109304 | None:intergenic | 45.0% | |
| AATTACCAAACCCTTTCCCC+AGG | - | chr4.2:50108898-50108917 | MS.gene98667:intron | 45.0% | |
| AATTCAGATCAGTCGAAGCC+AGG | + | chr4.2:50110321-50110340 | None:intergenic | 45.0% | |
| ACAACCTGAGTTCACACAAC+TGG | - | chr4.2:50108439-50108458 | MS.gene98667:intron | 45.0% | |
| AGGCATGTCCTTGCTTTGTA+AGG | - | chr4.2:50107334-50107353 | MS.gene98667:intron | 45.0% | |
| AGTGGAATGATTCGAAGCAG+AGG | - | chr4.2:50109828-50109847 | MS.gene98667:intron | 45.0% | |
| ATTGTTAAGGCGATGCTCTG+CGG | - | chr4.2:50109559-50109578 | MS.gene98667:intron | 45.0% | |
| CATATGTAAGCCTGGGGAAA+GGG | + | chr4.2:50108911-50108930 | None:intergenic | 45.0% | |
| CCTTGTAGGATCCAAATTGG+CGG | - | chr4.2:50109142-50109161 | MS.gene98667:intron | 45.0% | |
| CTCATTCTTAGAGACCACAC+CGG | - | chr4.2:50106929-50106948 | MS.gene98667:intron | 45.0% | |
| CTTCAGCATATGTAAGCCTG+GGG | + | chr4.2:50108917-50108936 | None:intergenic | 45.0% | |
| CTTTATGTCAGATTGGTGGG+GGG | - | chr4.2:50110149-50110168 | MS.gene98667:intron | 45.0% | |
| GAGTCCTTGAAATCCTTTGG+AGG | + | chr4.2:50106814-50106833 | None:intergenic | 45.0% | |
| GCAAGGTTGTTCATGTCTTC+AGG | + | chr4.2:50109998-50110017 | None:intergenic | 45.0% | |
| GCTTCAGCATATGTAAGCCT+GGG | + | chr4.2:50108918-50108937 | None:intergenic | 45.0% | |
| GTAAGACCAGCATTCAGTCA+TGG | - | chr4.2:50107269-50107288 | MS.gene98667:CDS | 45.0% | |
| GTCGCATGAATTATGAAGCG+AGG | - | chr4.2:50108115-50108134 | MS.gene98667:CDS | 45.0% | |
| GTTGAAACTCCGATACTGTC+AGG | - | chr4.2:50107946-50107965 | MS.gene98667:intron | 45.0% | |
| GTTGAACTTCACAGACGCTA+CGG | - | chr4.2:50106893-50106912 | MS.gene98667:intron | 45.0% | |
| TAACCTGAATAATGCCGGTG+TGG | + | chr4.2:50106946-50106965 | None:intergenic | 45.0% | |
| TCACAGCTTCCACCTAGATA+TGG | + | chr4.2:50107363-50107382 | None:intergenic | 45.0% | |
| TCTTGAAGCTCTTGACATGG+GGG | - | chr4.2:50110387-50110406 | MS.gene98667:CDS | 45.0% | |
| TGAGACTCTAGGCATCTCAA+TGG | - | chr4.2:50110213-50110232 | MS.gene98667:intron | 45.0% | |
| TGCAGAAGGTTCTCCTAATG+AGG | - | chr4.2:50107183-50107202 | MS.gene98667:intron | 45.0% | |
| TGCTTCAGCATATGTAAGCC+TGG | + | chr4.2:50108919-50108938 | None:intergenic | 45.0% | |
| TTATCGACAAGGGAGGAATG+GGG | + | chr4.2:50110450-50110469 | None:intergenic | 45.0% | |
| TTCTCTGATTCCTTGGAGTG+TGG | - | chr4.2:50109272-50109291 | MS.gene98667:CDS | 45.0% | |
| TTTCAGGCTGAAGCGAAGTA+TGG | - | chr4.2:50110358-50110377 | MS.gene98667:CDS | 45.0% | |
| ! | AACGGTTTTACCGACATCGT+TGG | + | chr4.2:50106858-50106877 | None:intergenic | 45.0% |
| ! | GAGCCTTGTAGGATCCAAAT+TGG | - | chr4.2:50109139-50109158 | MS.gene98667:intron | 45.0% |
| !! | AAACCGTTGGTCTTTGTGGT+TGG | - | chr4.2:50106870-50106889 | MS.gene98667:intron | 45.0% |
| !! | AACCGTTGGTCTTTGTGGTT+GGG | - | chr4.2:50106871-50106890 | MS.gene98667:intron | 45.0% |
| !! | CTGCCATTCAAGGTGTTGTT+AGG | - | chr4.2:50107032-50107051 | MS.gene98667:CDS | 45.0% |
| !! | GGTAAAACCGTTGGTCTTTG+TGG | - | chr4.2:50106866-50106885 | MS.gene98667:intron | 45.0% |
| !! | TCAGGATTTGGTGCAGTGAA+AGG | + | chr4.2:50109980-50109999 | None:intergenic | 45.0% |
| !! | TCGTGCATTGGCTTATGACA+TGG | - | chr4.2:50110024-50110043 | MS.gene98667:intron | 45.0% |
| !! | TTGTGGAGGTACTATCCAGT+AGG | - | chr4.2:50107830-50107849 | MS.gene98667:CDS | 45.0% |
| !!! | ATTTTGGGTTTGCGAAGGGA+TGG | + | chr4.2:50106713-50106732 | None:intergenic | 45.0% |
| !!! | TTTTGGGTTTGCGAAGGGAT+GGG | + | chr4.2:50106712-50106731 | None:intergenic | 45.0% |
| AGACCACACCGGCATTATTC+AGG | - | chr4.2:50106940-50106959 | MS.gene98667:intron | 50.0% | |
| CATCGAGGTTGCTGCAAATG+AGG | - | chr4.2:50107099-50107118 | MS.gene98667:intron | 50.0% | |
| CATGTTGCTGCGGCATAATG+TGG | - | chr4.2:50107768-50107787 | MS.gene98667:CDS | 50.0% | |
| CCACACTCAAGCACGAGATA+TGG | + | chr4.2:50107462-50107481 | None:intergenic | 50.0% | |
| CCATATCTCGTGCTTGAGTG+TGG | - | chr4.2:50107459-50107478 | MS.gene98667:CDS | 50.0% | |
| CCGCCAATTTGGATCCTACA+AGG | + | chr4.2:50109145-50109164 | None:intergenic | 50.0% | |
| GAGTATGTGGCTGCCATTCA+AGG | - | chr4.2:50107022-50107041 | MS.gene98667:intron | 50.0% | |
| GCATATGTAAGCCTGGGGAA+AGG | + | chr4.2:50108912-50108931 | None:intergenic | 50.0% | |
| GGTAGAGTTTGCCGCCAATT+TGG | + | chr4.2:50109156-50109175 | None:intergenic | 50.0% | |
| GGTGTGGATCCTGACAGTAT+CGG | + | chr4.2:50107958-50107977 | None:intergenic | 50.0% | |
| TAATGCCTTCAACGCATGCC+TGG | - | chr4.2:50110300-50110319 | MS.gene98667:CDS | 50.0% | |
| TCTAGGCATCTCAATGGAGC+AGG | - | chr4.2:50110219-50110238 | MS.gene98667:intron | 50.0% | |
| TCTGATTCCTTGGAGTGTGG+TGG | - | chr4.2:50109275-50109294 | MS.gene98667:CDS | 50.0% | |
| TGATTCGAAGCAGAGGCTTG+AGG | - | chr4.2:50109835-50109854 | MS.gene98667:intron | 50.0% | |
| TTGGATCCTACAAGGCTCGA+GGG | + | chr4.2:50109137-50109156 | None:intergenic | 50.0% | |
| TTGTTAAGGCGATGCTCTGC+GGG | - | chr4.2:50109560-50109579 | MS.gene98667:intron | 50.0% | |
| TTTGGATCCTACAAGGCTCG+AGG | + | chr4.2:50109138-50109157 | None:intergenic | 50.0% | |
| ! | ACTAATCCCTCGAGCCTTGT+AGG | - | chr4.2:50109128-50109147 | MS.gene98667:intron | 50.0% |
| ! | CAGCCACATACTCGCGTTTT+AGG | + | chr4.2:50107015-50107034 | None:intergenic | 50.0% |
| ! | CATGGTTTTCAACGGGGTGA+AGG | - | chr4.2:50110042-50110061 | MS.gene98667:intron | 50.0% |
| ! | GATGAAAACCGGCTTCATCG+AGG | - | chr4.2:50107084-50107103 | MS.gene98667:intron | 50.0% |
| ! | TATCTGAGGGCTTTGTGGCA+AGG | + | chr4.2:50108152-50108171 | None:intergenic | 50.0% |
| !! | AGGGATTGGTTGAGGGGTTT+AGG | + | chr4.2:50106794-50106813 | None:intergenic | 50.0% |
| !! | CCTTTGGAGGGATTGGTTGA+GGG | + | chr4.2:50106801-50106820 | None:intergenic | 50.0% |
| !! | CTTTGGAGGGATTGGTTGAG+GGG | + | chr4.2:50106800-50106819 | None:intergenic | 50.0% |
| !! | TCCTTTGGAGGGATTGGTTG+AGG | + | chr4.2:50106802-50106821 | None:intergenic | 50.0% |
| ATCCACACCAGAAGGTTCCC+GGG | - | chr4.2:50107969-50107988 | MS.gene98667:intron | 55.0% | |
| CAACTGTTGGGGATCCACCT+CGG | + | chr4.2:50110734-50110753 | None:intergenic | 55.0% | |
| CCCTCAACCAATCCCTCCAA+AGG | - | chr4.2:50106798-50106817 | MS.gene98667:CDS | 55.0% | |
| CTCGGAAGGTGATCTCGTGA+GGG | + | chr4.2:50110716-50110735 | None:intergenic | 55.0% | |
| CTGTCAGGATCCACACCAGA+AGG | - | chr4.2:50107961-50107980 | MS.gene98667:intron | 55.0% | |
| GAACTTCACAGACGCTACGG+TGG | - | chr4.2:50106896-50106915 | MS.gene98667:intron | 55.0% | |
| GAGTACTTCGCTGCACCAGA+AGG | + | chr4.2:50109323-50109342 | None:intergenic | 55.0% | |
| GATCCACACCAGAAGGTTCC+CGG | - | chr4.2:50107968-50107987 | MS.gene98667:intron | 55.0% | |
| GGCTCGCAAGTTAAAGGGAG+AGG | + | chr4.2:50110095-50110114 | None:intergenic | 55.0% | |
| GTAAGCCTGGGGAAAGGGTT+TGG | + | chr4.2:50108906-50108925 | None:intergenic | 55.0% | |
| TAGTCTCCGCAAGTTGCGCA+CGG | + | chr4.2:50109112-50109131 | None:intergenic | 55.0% | |
| TATCCTCCGTGCGCAACTTG+CGG | - | chr4.2:50109103-50109122 | MS.gene98667:intron | 55.0% | |
| TGCAGCAACCTCGATGAAGC+CGG | + | chr4.2:50107095-50107114 | None:intergenic | 55.0% | |
| AGTTGCGCACGGAGGATACC+TGG | + | chr4.2:50109101-50109120 | None:intergenic | 60.0% | |
| CACGAGATCACCTTCCGAGG+TGG | - | chr4.2:50110717-50110736 | MS.gene98667:CDS | 60.0% | |
| CCAATGCACGAGCCGATGCA+AGG | + | chr4.2:50110015-50110034 | None:intergenic | 60.0% | |
| CCTCACGAGATCACCTTCCG+AGG | - | chr4.2:50110714-50110733 | MS.gene98667:CDS | 60.0% | |
| CCTCGGAAGGTGATCTCGTG+AGG | + | chr4.2:50110717-50110736 | None:intergenic | 60.0% | |
| CGAAGCCAGGCATGCGTTGA+AGG | + | chr4.2:50110308-50110327 | None:intergenic | 60.0% | |
| TGTTGGGGATCCACCTCGGA+AGG | + | chr4.2:50110730-50110749 | None:intergenic | 60.0% | |
| TTCCCGGGAACCTTCTGGTG+TGG | + | chr4.2:50107974-50107993 | None:intergenic | 60.0% | |
| ! | AAGGGATGGGCTTCGCCGAA+TGG | + | chr4.2:50106699-50106718 | None:intergenic | 60.0% |
| !! | CCTTGCATCGGCTCGTGCAT+TGG | - | chr4.2:50110012-50110031 | MS.gene98667:intron | 60.0% |
| TCTCCGCAAGTTGCGCACGG+AGG | + | chr4.2:50109109-50109128 | None:intergenic | 65.0% | |
| GACATGGGGGCTCCGCCACA+TGG | - | chr4.2:50110400-50110419 | MS.gene98667:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 50106659 | 50110792 | 50106659 | ID=MS.gene98667 |
| chr4.2 | mRNA | 50106659 | 50110792 | 50106659 | ID=MS.gene98667.t1;Parent=MS.gene98667 |
| chr4.2 | exon | 50110233 | 50110792 | 50110233 | ID=MS.gene98667.t1.exon1;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50110233 | 50110792 | 50110233 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50109614 | 50109725 | 50109614 | ID=MS.gene98667.t1.exon2;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50109614 | 50109725 | 50109614 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50109434 | 50109505 | 50109434 | ID=MS.gene98667.t1.exon3;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50109434 | 50109505 | 50109434 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50109227 | 50109318 | 50109227 | ID=MS.gene98667.t1.exon4;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50109227 | 50109318 | 50109227 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50108925 | 50109045 | 50108925 | ID=MS.gene98667.t1.exon5;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50108925 | 50109045 | 50108925 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50108456 | 50108578 | 50108456 | ID=MS.gene98667.t1.exon6;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50108456 | 50108578 | 50108456 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50108035 | 50108215 | 50108035 | ID=MS.gene98667.t1.exon7;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50108035 | 50108215 | 50108035 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50107763 | 50107947 | 50107763 | ID=MS.gene98667.t1.exon8;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50107763 | 50107947 | 50107763 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50107595 | 50107666 | 50107595 | ID=MS.gene98667.t1.exon9;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50107595 | 50107666 | 50107595 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50107388 | 50107486 | 50107388 | ID=MS.gene98667.t1.exon10;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50107388 | 50107486 | 50107388 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50107211 | 50107291 | 50107211 | ID=MS.gene98667.t1.exon11;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50107211 | 50107291 | 50107211 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50107030 | 50107087 | 50107030 | ID=MS.gene98667.t1.exon12;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50107030 | 50107087 | 50107030 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| chr4.2 | exon | 50106659 | 50106840 | 50106659 | ID=MS.gene98667.t1.exon13;Parent=MS.gene98667.t1 |
| chr4.2 | CDS | 50106659 | 50106840 | 50106659 | ID=cds.MS.gene98667.t1;Parent=MS.gene98667.t1 |
| Gene Sequence |
| Protein sequence |
