AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000215.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000215.01.T01 MTR_1g021270 97.023 571 17 0 97 667 26 596 0.0 1159
MsG0180000215.01.T01 MTR_1g021320 77.979 386 79 2 280 664 460 840 0.0 601
MsG0180000215.01.T01 MTR_1g021320 36.190 105 59 2 90 186 22 126 3.08e-13 73.6
MsG0180000215.01.T01 MTR_1g021440 40.674 386 183 9 73 432 22 387 6.16e-79 257
MsG0180000215.01.T01 MTR_1g021440 43.353 173 85 2 497 660 227 395 1.76e-37 144
MsG0180000215.01.T01 MTR_1g021440 41.192 369 187 8 73 432 22 369 9.35e-78 253
MsG0180000215.01.T01 MTR_1g021440 31.165 369 212 13 323 660 20 377 1.44e-38 147
MsG0180000215.01.T01 MTR_1g021360 43.452 336 128 9 96 424 192 472 1.77e-73 245
MsG0180000215.01.T01 MTR_1g021360 29.878 328 194 8 326 653 181 472 2.20e-33 134
MsG0180000215.01.T01 MTR_1g021360 37.209 86 53 1 102 186 41 126 1.30e-11 67.8
MsG0180000215.01.T01 MTR_1g021330 41.379 348 180 7 96 432 36 370 1.28e-72 240
MsG0180000215.01.T01 MTR_1g021330 43.889 180 86 4 497 667 212 385 1.02e-37 145
MsG0180000215.01.T01 MTR_1g021295 70.370 162 47 1 266 426 56 217 1.01e-69 226
MsG0180000215.01.T01 MTR_1g021295 47.586 145 75 1 512 655 73 217 1.67e-35 134
MsG0180000215.01.T01 MTR_1g021400 39.326 356 191 9 323 667 27 368 6.64e-64 216
MsG0180000215.01.T01 MTR_1g021400 34.699 366 199 6 73 431 29 361 2.78e-57 198
MsG0180000215.01.T01 MTR_1g021435 41.265 332 152 9 364 667 56 372 1.41e-62 213
MsG0180000215.01.T01 MTR_1g021435 34.454 357 192 8 102 438 38 372 3.50e-57 198
MsG0180000215.01.T01 MTR_1g021410 39.669 363 178 12 323 666 20 360 1.47e-60 207
MsG0180000215.01.T01 MTR_1g021410 35.655 359 190 10 90 431 20 354 2.05e-54 190
MsG0180000215.01.T01 MTR_1g021380 36.436 376 183 10 73 438 21 350 1.37e-58 201
MsG0180000215.01.T01 MTR_1g021380 37.346 324 178 7 341 658 35 339 2.24e-49 176
MsG0180000215.01.T01 MTR_1g021350 67.045 88 27 1 347 432 246 333 6.48e-29 119
MsG0180000215.01.T01 MTR_1g021350 28.125 352 190 12 341 667 35 348 3.83e-20 92.8
MsG0180000215.01.T01 MTR_1g021350 33.600 125 68 3 73 195 21 132 1.93e-12 69.7
MsG0180000215.01.T01 MTR_6g036740 66.667 84 26 2 345 426 109 192 1.48e-27 114
MsG0180000215.01.T01 MTR_1g021440 30.847 295 158 9 73 341 22 296 6.65e-27 111
MsG0180000215.01.T01 MTR_1g021440 30.935 278 162 8 73 341 22 278 3.19e-26 109
MsG0180000215.01.T01 MTR_6g016340 58.108 74 30 1 29 102 51 123 4.69e-22 94.4
MsG0180000215.01.T01 MTR_1g035460 24.606 317 204 6 102 418 2 283 1.84e-21 97.4
MsG0180000215.01.T01 MTR_7g050560 23.669 338 188 9 102 432 29 303 4.51e-18 86.3
MsG0180000215.01.T01 MTR_3g052690 62.500 48 18 0 55 102 46 93 1.43e-14 72.0
MsG0180000215.01.T01 MTR_1g021290 33.088 136 85 2 55 189 129 259 6.77e-14 73.9
MsG0180000215.01.T01 MTR_4g068320 40.506 79 47 0 97 175 17 95 2.16e-13 73.2
MsG0180000215.01.T01 MTR_7g050710 32.692 104 67 1 101 204 28 128 8.06e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000215.01.T01 AT3G18990 25.424 354 213 12 90 418 5 332 5.21e-22 98.2
MsG0180000215.01.T01 AT3G18990 25.424 354 213 12 90 418 5 332 7.33e-22 98.6
MsG0180000215.01.T01 AT4G33280 23.416 363 225 13 81 407 18 363 2.65e-12 69.7
MsG0180000215.01.T01 AT5G42700 32.110 109 69 1 546 654 76 179 8.84e-12 65.1
MsG0180000215.01.T01 AT5G42700 30.556 144 89 3 287 425 42 179 1.26e-11 64.3
MsG0180000215.01.T01 AT5G42700 32.075 106 67 1 546 651 121 221 2.57e-11 64.7
MsG0180000215.01.T01 AT5G42700 30.556 144 89 3 287 425 87 224 3.68e-11 63.9

Find 162 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTCACTGCGCAAGTATT+TGG 0.196728 1:-2956823 MsG0180000215.01.T01:CDS
CGTGATAATGACATCAATTT+TGG 0.202243 1:-2954026 MsG0180000215.01.T01:CDS
GAGCTAACTTTAGGTTTCTT+TGG 0.250603 1:+2954948 None:intergenic
GCATATATCTGGAAGTATTA+TGG 0.252813 1:+2954970 None:intergenic
ATCTACTAAGCCACTGCTTT+TGG 0.270341 1:-2953698 MsG0180000215.01.T01:three_prime_UTR
GAAGGTCTTGACCATCAAAT+TGG 0.285624 1:-2953936 MsG0180000215.01.T01:CDS
TGCGGATTAGTTTCATTAAC+TGG 0.291460 1:-2956985 MsG0180000215.01.T01:CDS
ATTGTTCTGCCTTTGGCATC+TGG 0.293818 1:+2954083 None:intergenic
AGGTTTCTTTGGCATATATC+TGG 0.305794 1:+2954959 None:intergenic
TGATTTGGTTTGCTAGTACT+TGG 0.306269 1:-2960887 MsG0180000215.01.T01:CDS
TGGTCTAACCAACTCATAAT+TGG 0.307433 1:+2956600 None:intergenic
CTGCACTTTGAGCTAACTTT+AGG 0.312808 1:+2954939 None:intergenic
CGGTGGATCCATCTCATATT+GGG 0.313134 1:-2960974 MsG0180000215.01.T01:CDS
GCTCTCTAATGCATTTGATT+TGG 0.317234 1:-2960902 MsG0180000215.01.T01:CDS
ATAATCTTTGTCTTGCAGTT+TGG 0.320704 1:+2955251 None:intergenic
ACTAGCTGAACATTCTTTGC+AGG 0.325035 1:+2956549 None:intergenic
TGTGCAGCAGAGAACTGATA+TGG 0.328537 1:+2954176 None:intergenic
GTTTCACATGCCCAATTTGA+TGG 0.329182 1:+2953925 None:intergenic
CATCAGTTTGCTTCCTCTAC+AGG 0.330465 1:-2960942 MsG0180000215.01.T01:CDS
CTTCCTTCCCACTTCTATAC+AGG 0.338352 1:+2956295 None:intergenic
ATGTACATGCAGCTGTTCTT+TGG 0.340978 1:-2961217 MsG0180000215.01.T01:CDS
GTTTCTCTGATCATACTAAT+TGG 0.342872 1:+2956580 None:intergenic
TGTGACATCGAAAATTGATA+TGG 0.348004 1:+2955278 None:intergenic
GATCATATTCTGATTGGTTA+AGG 0.365002 1:-2953493 MsG0180000215.01.T01:three_prime_UTR
TTTACAATATGGCGACCTTT+TGG 0.367843 1:-2956869 MsG0180000215.01.T01:CDS
GGAGATCATCATTTACAATA+TGG 0.369169 1:-2956880 MsG0180000215.01.T01:CDS
TATTTATTTGATTTATAACT+TGG 0.372561 1:+2953462 None:intergenic
TTCTCAAACCAGCTTTAGCC+TGG 0.378926 1:+2954405 None:intergenic
GTAAGATTTGGCAGCTTGTA+AGG 0.382192 1:-2961016 MsG0180000215.01.T01:intron
TTGAATTCAATGGCTAAAAC+AGG 0.382436 1:+2954867 None:intergenic
GAGCCTGAGTTGGCTATTGC+TGG 0.383202 1:-2956634 MsG0180000215.01.T01:CDS
GTGATGCAGGTTCATATATC+CGG 0.383257 1:-2953969 MsG0180000215.01.T01:CDS
GATTTGGTTTGCTAGTACTT+GGG 0.386078 1:-2960886 MsG0180000215.01.T01:intron
ACCGGATTTCTTGAATTCAA+TGG 0.386457 1:+2954857 None:intergenic
ATTGCTGAGGTTGGAAAAGA+TGG 0.398863 1:-2955056 MsG0180000215.01.T01:CDS
AAGGTTGATCATATTCTGAT+TGG 0.399498 1:-2953499 MsG0180000215.01.T01:three_prime_UTR
CTAGATCGCTGAACAAGTTA+AGG 0.406274 1:-2953518 MsG0180000215.01.T01:three_prime_UTR
CAAGAACGTTAGCAAGTAGA+TGG 0.407216 1:+2953876 None:intergenic
TCGGTGGATCCATCTCATAT+TGG 0.407583 1:-2960975 MsG0180000215.01.T01:CDS
ATTTCATCTTTGAATGTTGT+TGG 0.409910 1:-2956700 MsG0180000215.01.T01:CDS
GAAAAGAGGACGTAAATGAT+TGG 0.410999 1:+2956205 None:intergenic
GCCATTGAATTCAAGAAATC+CGG 0.411437 1:-2954858 MsG0180000215.01.T01:CDS
TTAGCGATGATACAACTAAC+TGG 0.418009 1:+2953745 None:intergenic
CTTGTATGCACTCTAGTTGT+TGG 0.420097 1:+2955185 None:intergenic
GTTCGATTGGGGCTGGGATG+AGG 0.428644 1:-2961327 MsG0180000215.01.T01:CDS
ATGTCGTGCCCTCCATTTGA+TGG 0.432582 1:+2957007 None:intergenic
GATTATTCTTTATAATTTGA+AGG 0.433632 1:-2955234 MsG0180000215.01.T01:CDS
TATGGCGTAAATGTTCGATT+GGG 0.435459 1:-2961339 None:intergenic
GGAAGTGGCATAGGAGGTTA+TGG 0.440153 1:-2961292 MsG0180000215.01.T01:CDS
TTACTATTTCCTGTTTGAAA+AGG 0.440868 1:+2956514 None:intergenic
CGTAAATGTTCGATTGGGGC+TGG 0.441672 1:-2961334 None:intergenic
TTCAACTTCGATGATATTGA+AGG 0.442101 1:-2956745 MsG0180000215.01.T01:CDS
CTGCTCTAACATCTTTCATC+CGG 0.444425 1:-2953419 MsG0180000215.01.T01:three_prime_UTR
AATCATCTGTTCTTTCATCA+TGG 0.447056 1:-2956919 MsG0180000215.01.T01:CDS
TCATGGATGGTCAACATTTG+TGG 0.447379 1:-2956902 MsG0180000215.01.T01:CDS
GAACTGTCTTTGTGTTCATT+CGG 0.448136 1:-2960994 MsG0180000215.01.T01:CDS
ACAGATCAATCAATCTCAAA+TGG 0.450374 1:-2953845 MsG0180000215.01.T01:three_prime_UTR
CTCATGTTAAGTGTCATTCA+AGG 0.451379 1:-2953584 MsG0180000215.01.T01:three_prime_UTR
GCAAGTTCGTTTAGTTGAGC+AGG 0.453021 1:-2956944 MsG0180000215.01.T01:CDS
CGTGTTCGCATTGCTGAGGT+TGG 0.454549 1:-2955065 MsG0180000215.01.T01:CDS
AGGCTATAGTAGTATTGAAC+CGG 0.460128 1:+2953400 None:intergenic
TTTAACAAAATATGGAAAAG+AGG 0.462248 1:+2956191 None:intergenic
CGTTTCTCATTATGTGATGC+AGG 0.466485 1:-2953982 MsG0180000215.01.T01:CDS
CGAAGTAGTTGAAGCTCTAC+CGG 0.467583 1:+2954839 None:intergenic
GGTGTGAATTGTTCTGCCTT+TGG 0.469200 1:+2954076 None:intergenic
CTGGTCCTAGTGGAAATACT+TGG 0.471402 1:-2956966 MsG0180000215.01.T01:CDS
CACTCTATGTGGAGGATGGA+TGG 0.472108 1:-2955159 MsG0180000215.01.T01:CDS
TTCAACTACTTCGAAGAAGA+TGG 0.472680 1:-2954829 MsG0180000215.01.T01:CDS
TGATACAACTAACTGGGATC+TGG 0.473898 1:+2953752 None:intergenic
GAGGAAGGATGTTCCTCTGA+TGG 0.480348 1:-2961195 MsG0180000215.01.T01:CDS
CTATGGCGTAAATGTTCGAT+TGG 0.480898 1:-2961340 None:intergenic
CTGTCTTTGTGTTCATTCGG+TGG 0.485883 1:-2960991 MsG0180000215.01.T01:CDS
ATATTCTGATTGGTTAAGGT+TGG 0.489032 1:-2953489 MsG0180000215.01.T01:three_prime_UTR
CTAAGTTCCCAGGCTAAAGC+TGG 0.489551 1:-2954413 MsG0180000215.01.T01:CDS
AAAAGAGGACGTAAATGATT+GGG 0.490021 1:+2956206 None:intergenic
GGATGTTCCTCTGATGGTCT+CGG 0.493273 1:-2961189 MsG0180000215.01.T01:intron
GTAAATGTTCGATTGGGGCT+GGG 0.493576 1:-2961333 None:intergenic
ATTTGATGGACAAAACCATC+TGG 0.494945 1:+2957021 None:intergenic
ATATGAACCACTGACATTGA+AGG 0.496754 1:+2956158 None:intergenic
AAGGTCTTGACCATCAAATT+GGG 0.497705 1:-2953935 MsG0180000215.01.T01:CDS
GTAAGGCTTGGAAGTGGCAT+AGG 0.500179 1:-2961301 MsG0180000215.01.T01:CDS
TGATGCAGGTTCATATATCC+GGG 0.500346 1:-2953968 MsG0180000215.01.T01:CDS
AAAAGATGGGTTAGACTGCC+AGG 0.502243 1:-2955042 MsG0180000215.01.T01:CDS
ATTATTCTTTATAATTTGAA+GGG 0.502841 1:-2955233 MsG0180000215.01.T01:CDS
TACATGCAGCTGTTCTTTGG+AGG 0.503662 1:-2961214 MsG0180000215.01.T01:CDS
GTGCGACGCCATTGAGAACC+AGG 0.505570 1:-2956656 MsG0180000215.01.T01:CDS
TTCGATTGGGGCTGGGATGA+GGG 0.505577 1:-2961326 MsG0180000215.01.T01:CDS
ATCTGTTCTTTCATCATGGA+TGG 0.506290 1:-2956915 MsG0180000215.01.T01:CDS
CATGGATGGTCAACATTTGT+GGG 0.508036 1:-2956901 MsG0180000215.01.T01:CDS
TCAGTAGGCTCGTGAAATGT+TGG 0.511284 1:-2953639 MsG0180000215.01.T01:three_prime_UTR
GGGCTGGGATGAGGGAGGTA+AGG 0.513667 1:-2961318 MsG0180000215.01.T01:CDS
GGGATGAGGGAGGTAAGGCT+TGG 0.515804 1:-2961313 MsG0180000215.01.T01:CDS
GGAAATAGTAATGAAGTTGA+AGG 0.516580 1:-2956502 MsG0180000215.01.T01:intron
AAAGAACAGCTGCATGTACA+TGG 0.518936 1:+2961219 None:intergenic
CTCAGGCTCCTGGTTCTCAA+TGG 0.520233 1:+2956648 None:intergenic
TAACCAACTCATAATTGGAT+AGG 0.529426 1:+2956605 None:intergenic
TCATATATCCGGGGTTGGAA+AGG 0.529986 1:-2953958 MsG0180000215.01.T01:CDS
TCTTCAACACGATGTTTCCT+CGG 0.530379 1:+2954440 None:intergenic
CAATAGCCAACTCAGGCTCC+TGG 0.530813 1:+2956638 None:intergenic
GGCATAGGAGGTTATGGACG+TGG 0.530967 1:-2961286 MsG0180000215.01.T01:CDS
AAACCTATCCAATTATGAGT+TGG 0.533124 1:-2956608 MsG0180000215.01.T01:CDS
TCAACTACTTCGAAGAAGAT+GGG 0.533657 1:-2954828 MsG0180000215.01.T01:CDS
GCAATTCAAGAGGCCAGTGT+TGG 0.538663 1:-2954121 MsG0180000215.01.T01:CDS
CGTGGCAATAGCATAAAAGT+TGG 0.540845 1:-2955128 MsG0180000215.01.T01:CDS
GTGAAATGTTGGACAGGTAG+AGG 0.546110 1:-2953628 MsG0180000215.01.T01:three_prime_UTR
TGCAGCTGTTCTTTGGAGGA+AGG 0.551545 1:-2961210 MsG0180000215.01.T01:CDS
CAGGTTCATATATCCGGGGT+TGG 0.554905 1:-2953963 MsG0180000215.01.T01:CDS
CCTCGTATCTGAAAACCAAA+AGG 0.559251 1:+2956854 None:intergenic
TTCCTGTTTGAAAAGGAACA+TGG 0.559808 1:+2956521 None:intergenic
ATATCCGGGGTTGGAAAGGA+AGG 0.561335 1:-2953954 MsG0180000215.01.T01:CDS
GATGGGTTAGACTGCCAGGT+TGG 0.562198 1:-2955038 MsG0180000215.01.T01:CDS
TGTCAGTGGTTCATATACTC+TGG 0.566827 1:-2956151 MsG0180000215.01.T01:intron
ATAATTTGAAGGGAGAACAC+TGG 0.567172 1:-2955223 MsG0180000215.01.T01:CDS
TTTCACAAAATTAGGAAATG+GGG 0.568261 1:+2954337 None:intergenic
AGGCTCGTGAAATGTTGGAC+AGG 0.569309 1:-2953634 MsG0180000215.01.T01:three_prime_UTR
CAAATGGAGGGCACGACATG+CGG 0.572358 1:-2957003 MsG0180000215.01.T01:CDS
TTACCAGCAATAGCCAACTC+AGG 0.573877 1:+2956631 None:intergenic
GTTACGCTTCGCAATTCAAG+AGG 0.575759 1:-2954131 MsG0180000215.01.T01:CDS
GTTTCATTAACTGGTCCTAG+TGG 0.577634 1:-2956976 MsG0180000215.01.T01:CDS
ATGAAGAAGTTCAATGTCAG+TGG 0.577831 1:-2954311 MsG0180000215.01.T01:CDS
AGGCTTGGAAGTGGCATAGG+AGG 0.578873 1:-2961298 MsG0180000215.01.T01:CDS
AAGACCTTCCTTTCCAACCC+CGG 0.580500 1:+2953950 None:intergenic
AAATGATCCCCAATATGAGA+TGG 0.581902 1:+2960966 None:intergenic
CATACAAGTCACACTCTATG+TGG 0.582424 1:-2955170 MsG0180000215.01.T01:CDS
AGGGAGGTAAGGCTTGGAAG+TGG 0.585646 1:-2961307 MsG0180000215.01.T01:CDS
CAGCTGCATGTACATGGACA+TGG 0.585971 1:+2961225 None:intergenic
GCAGCAATCCTGTATAGAAG+TGG 0.586525 1:-2956303 MsG0180000215.01.T01:CDS
TGAGAACCAGGAGCCTGAGT+TGG 0.586623 1:-2956644 MsG0180000215.01.T01:CDS
GTCACACTCTATGTGGAGGA+TGG 0.589858 1:-2955163 MsG0180000215.01.T01:CDS
TCTCAAACCAGCTTTAGCCT+GGG 0.589973 1:+2954406 None:intergenic
TGAAGATGAACTAAGTTCCC+AGG 0.590157 1:-2954423 MsG0180000215.01.T01:CDS
GTGCAGCAGAGAACTGATAT+GGG 0.592876 1:+2954177 None:intergenic
GATGTCATTATCACGAACAA+AGG 0.594099 1:+2954034 None:intergenic
ATCAAAACCTTCAATGTCAG+TGG 0.599816 1:-2956165 MsG0180000215.01.T01:CDS
TTGCTGAGGTTGGAAAAGAT+GGG 0.610413 1:-2955055 MsG0180000215.01.T01:CDS
GGACGTGGGAAGAAGACTAT+CGG 0.611391 1:-2961271 MsG0180000215.01.T01:CDS
TGTCAGTGGATCATACACTT+TGG 0.614461 1:-2954297 MsG0180000215.01.T01:intron
GATTGTCTATAACATTCAGT+AGG 0.614697 1:-2953654 MsG0180000215.01.T01:three_prime_UTR
CAGCAATCCTGTATAGAAGT+GGG 0.617200 1:-2956302 MsG0180000215.01.T01:CDS
GATGACCACGATATTCTTAG+CGG 0.619282 1:-2956273 MsG0180000215.01.T01:CDS
CAACTACTTCGAAGAAGATG+GGG 0.619729 1:-2954827 MsG0180000215.01.T01:CDS
ACTTGCCAAGTATTTCCACT+AGG 0.637449 1:+2956961 None:intergenic
TAGCGATGATACAACTAACT+GGG 0.638437 1:+2953746 None:intergenic
ATTACGTGTTCGCATTGCTG+AGG 0.639477 1:-2955069 MsG0180000215.01.T01:CDS
AACTCTGTTCCAGATGCCAA+AGG 0.640736 1:-2954092 MsG0180000215.01.T01:CDS
GTGATGTTCAGAAGAAAATG+AGG 0.641443 1:-2956678 MsG0180000215.01.T01:CDS
GCATAGGAGGTTATGGACGT+GGG 0.644836 1:-2961285 MsG0180000215.01.T01:CDS
GGTGGATCCATCTCATATTG+GGG 0.645073 1:-2960973 MsG0180000215.01.T01:CDS
GATTGGGGCTGGGATGAGGG+AGG 0.651279 1:-2961323 MsG0180000215.01.T01:CDS
GCATGTACATGGACATGGAA+AGG 0.658872 1:+2961230 None:intergenic
AATCCTGTATAGAAGTGGGA+AGG 0.661650 1:-2956298 MsG0180000215.01.T01:CDS
ATGGCGTAAATGTTCGATTG+GGG 0.668357 1:-2961338 None:intergenic
TAGCTCAAAGTGCAGAACGA+AGG 0.671058 1:-2954931 MsG0180000215.01.T01:CDS
GCGAACACCGAGACCATCAG+AGG 0.673495 1:+2961182 None:intergenic
ACAAGTCACACTCTATGTGG+AGG 0.673956 1:-2955167 MsG0180000215.01.T01:CDS
ATGACAAGAACCAAAAGCAG+TGG 0.676895 1:+2953688 None:intergenic
CAGAGTTTACAATCCAACAC+TGG 0.686442 1:+2954108 None:intergenic
TTAATGCAGAGAGTTCCAGA+TGG 0.692519 1:-2957036 MsG0180000215.01.T01:intron
AGGACAGAAAAGTGATGCTG+AGG 0.705655 1:-2956725 MsG0180000215.01.T01:CDS
AAGCTCCGCTAAGAATATCG+TGG 0.708377 1:+2956268 None:intergenic
AAACAAAGACAGCTGTACCG+AGG 0.720792 1:-2954457 MsG0180000215.01.T01:intron
GATGCAGGTTCATATATCCG+GGG 0.727717 1:-2953967 MsG0180000215.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAAATAAATAAATA+AGG + Chr1:2954194-2954213 None:intergenic 0.0%
!! AATAATAATAATAATAATAA+TGG - Chr1:2954859-2954878 MsG0180000215.01.T01:CDS 0.0%
!! ATAATAATAATAATAATAAT+GGG - Chr1:2954860-2954879 MsG0180000215.01.T01:CDS 0.0%
!! AATAAATAAATAAATAAGGT+TGG + Chr1:2954190-2954209 None:intergenic 10.0%
!! AATGGAATTAATTAATATAT+TGG - Chr1:2956199-2956218 MsG0180000215.01.T01:CDS 10.0%
!! AATTAAAGTTATATACATTT+AGG + Chr1:2956822-2956841 None:intergenic 10.0%
!! ATTATTCTTTATAATTTGAA+GGG - Chr1:2959473-2959492 MsG0180000215.01.T01:intron 10.0%
!! TATTAAAAAAAGAGATTAAT+TGG - Chr1:2955459-2955478 MsG0180000215.01.T01:intron 10.0%
!! TTAATTAATATATTGGAAAT+TGG - Chr1:2956206-2956225 MsG0180000215.01.T01:CDS 10.0%
!!! AATTAATCTCTAAAAAAAAA+TGG - Chr1:2956181-2956200 MsG0180000215.01.T01:CDS 10.0%
!!! ATATTTGAGATTTAAAAAAA+TGG - Chr1:2957212-2957231 MsG0180000215.01.T01:intron 10.0%
!!! ATTTTTTTTTAGAGATTAAT+TGG + Chr1:2956182-2956201 None:intergenic 10.0%
!!! TATTTATTTGATTTATAACT+TGG + Chr1:2961247-2961266 None:intergenic 10.0%
!!! TTGATTATTTTAACAAAATA+TGG + Chr1:2958526-2958545 None:intergenic 10.0%
!! AATAATGAGTGATATAATTT+AGG - Chr1:2955245-2955264 MsG0180000215.01.T01:CDS 15.0%
!! ACAGATTAAAAAATAATTGA+AGG + Chr1:2956472-2956491 None:intergenic 15.0%
!! AGATTAAAAAATAATTGAAG+GGG + Chr1:2956470-2956489 None:intergenic 15.0%
!! ATAATGAGTGATATAATTTA+GGG - Chr1:2955246-2955265 MsG0180000215.01.T01:CDS 15.0%
!! CAGATTAAAAAATAATTGAA+GGG + Chr1:2956471-2956490 None:intergenic 15.0%
!! GAAAAAACAAAAACAAAATT+AGG - Chr1:2954252-2954271 MsG0180000215.01.T01:intron 15.0%
!! GATAAATTATAAATGACAAA+AGG + Chr1:2958591-2958610 None:intergenic 15.0%
!! GATTATTCTTTATAATTTGA+AGG - Chr1:2959472-2959491 MsG0180000215.01.T01:intron 15.0%
!! TAAAATAAGTCAATCAAAAT+GGG - Chr1:2959066-2959085 MsG0180000215.01.T01:intron 15.0%
!! TAGAACAAAATTAAACTATA+TGG - Chr1:2955413-2955432 MsG0180000215.01.T01:intron 15.0%
!! TTGTTTGTATATACTTATAT+TGG - Chr1:2954604-2954623 MsG0180000215.01.T01:intron 15.0%
!!! AAAATTCTGAAATTTCTTTT+TGG - Chr1:2955877-2955896 MsG0180000215.01.T01:intron 15.0%
!!! ATAATAATAATAATAATGGG+AGG - Chr1:2954872-2954891 MsG0180000215.01.T01:CDS 15.0%
!!! ATTTTATTGTTTCTGATAAT+TGG + Chr1:2955862-2955881 None:intergenic 15.0%
!!! GTTTCTTATTTTAAGTTTAA+TGG - Chr1:2959312-2959331 MsG0180000215.01.T01:intron 15.0%
!!! TAATAATAATAATAATGGGA+GGG - Chr1:2954873-2954892 MsG0180000215.01.T01:CDS 15.0%
!!! TATTTTTTTTACAATTGCAA+TGG - Chr1:2960119-2960138 MsG0180000215.01.T01:intron 15.0%
!!! TTAATTTTTTCAGTAAGATT+TGG - Chr1:2953678-2953697 MsG0180000215.01.T01:three_prime_UTR 15.0%
!!! TTTGTTGAATTAATTTTCAA+TGG - Chr1:2956576-2956595 MsG0180000215.01.T01:CDS 15.0%
!!! TTTTATTGTTTCTGATAATT+GGG + Chr1:2955861-2955880 None:intergenic 15.0%
!! AAAATAGTCCAATTGATAAA+AGG - Chr1:2954316-2954335 MsG0180000215.01.T01:CDS 20.0%
!! AAACTATATGGACAAATTTA+AGG - Chr1:2955425-2955444 MsG0180000215.01.T01:intron 20.0%
!! AGAAAAGAGGAAAATAATAA+TGG - Chr1:2954911-2954930 MsG0180000215.01.T01:CDS 20.0%
!! ATAAATTGAAACATGCAATT+AGG + Chr1:2956789-2956808 None:intergenic 20.0%
!! CTAAAATAAGTCAATCAAAA+TGG - Chr1:2959065-2959084 MsG0180000215.01.T01:intron 20.0%
!! GAAAAGAGGAAAATAATAAT+GGG - Chr1:2954912-2954931 MsG0180000215.01.T01:CDS 20.0%
!! TCATCAATATGATATGATAA+TGG + Chr1:2956283-2956302 None:intergenic 20.0%
!! TTAAATAAAATGATAAGCTC+TGG + Chr1:2958351-2958370 None:intergenic 20.0%
!! TTCATTATAGTTTCCATAAT+TGG - Chr1:2953960-2953979 MsG0180000215.01.T01:CDS 20.0%
!! TTTAACAAAATATGGAAAAG+AGG + Chr1:2958518-2958537 None:intergenic 20.0%
!! TTTGAGAGAGAATTATTAAT+TGG + Chr1:2954298-2954317 None:intergenic 20.0%
!!! AAACTCTTGTTGTATTTTTT+TGG - Chr1:2954036-2954055 MsG0180000215.01.T01:CDS 20.0%
!!! AACTCTTGTTGTATTTTTTT+GGG - Chr1:2954037-2954056 MsG0180000215.01.T01:CDS 20.0%
!!! AATACTTTTTGGTAAAGTTA+GGG + Chr1:2957464-2957483 None:intergenic 20.0%
!!! AATCAATTTTTTTCTCCTAA+TGG - Chr1:2954829-2954848 MsG0180000215.01.T01:CDS 20.0%
!!! AATTCCAAATCAATACTTTT+TGG + Chr1:2957475-2957494 None:intergenic 20.0%
!!! ACTCTAAAAGAAAATACTTT+CGG + Chr1:2957141-2957160 None:intergenic 20.0%
!!! ATCAATTTTTTTCTCCTAAT+GGG - Chr1:2954830-2954849 MsG0180000215.01.T01:CDS 20.0%
!!! ATTTTCACAAAATTAGGAAA+TGG + Chr1:2960374-2960393 None:intergenic 20.0%
!!! ATTTTCTTTTAGAGTATGTT+TGG - Chr1:2957146-2957165 MsG0180000215.01.T01:intron 20.0%
!!! ATTTTGTACACAAGTAAAAT+TGG - Chr1:2956894-2956913 MsG0180000215.01.T01:CDS 20.0%
!!! GTGTAATTACTTGTAATTTT+AGG - Chr1:2956057-2956076 MsG0180000215.01.T01:intron 20.0%
!!! TATCAAACTGATTATTGATT+CGG + Chr1:2955196-2955215 None:intergenic 20.0%
!!! TTCATGATTTTCACAAAATT+AGG + Chr1:2960380-2960399 None:intergenic 20.0%
!!! TTTACCAAAAAGTATTGATT+TGG - Chr1:2957468-2957487 MsG0180000215.01.T01:intron 20.0%
!!! TTTTAAAAGTGAACATGATA+TGG + Chr1:2955536-2955555 None:intergenic 20.0%
!!! TTTTCACAAAATTAGGAAAT+GGG + Chr1:2960373-2960392 None:intergenic 20.0%
! AAGAAAAATGCTTGTTTAAG+AGG + Chr1:2955105-2955124 None:intergenic 25.0%
! AAGAAGATAACAGCATTATT+TGG + Chr1:2958616-2958635 None:intergenic 25.0%
! AAGTAAAATTGGAAGCAAAT+GGG - Chr1:2956905-2956924 MsG0180000215.01.T01:CDS 25.0%
! AATTGATAAAAGGAGTGAAT+AGG - Chr1:2954326-2954345 MsG0180000215.01.T01:CDS 25.0%
! ACATGCTTGAATTAGAAATT+GGG + Chr1:2955911-2955930 None:intergenic 25.0%
! AGAAAAATGCTTGTTTAAGA+GGG + Chr1:2955104-2955123 None:intergenic 25.0%
! AGAAGATAACAGCATTATTT+GGG + Chr1:2958615-2958634 None:intergenic 25.0%
! AGCAAATTCAATTTCATTCT+GGG - Chr1:2958230-2958249 MsG0180000215.01.T01:intron 25.0%
! ATAAGAAACATGTAAGTAGA+AGG + Chr1:2959301-2959320 None:intergenic 25.0%
! ATCAGAATAGAGAAATTAAG+AGG - Chr1:2955778-2955797 MsG0180000215.01.T01:intron 25.0%
! ATTTCATCTTTGAATGTTGT+TGG - Chr1:2958006-2958025 MsG0180000215.01.T01:intron 25.0%
! GATAAAAAGTTGTCAAAGAT+TGG - Chr1:2959809-2959828 MsG0180000215.01.T01:intron 25.0%
! TAGAACAAATTCGATTTAGA+AGG + Chr1:2953575-2953594 None:intergenic 25.0%
! TAGCAAATTCAATTTCATTC+TGG - Chr1:2958229-2958248 MsG0180000215.01.T01:intron 25.0%
! TAGTGAAAGAAAGAACAAAA+AGG - Chr1:2960153-2960172 MsG0180000215.01.T01:intron 25.0%
! TATTATTCATAAGCTTGTCA+AGG + Chr1:2959017-2959036 None:intergenic 25.0%
! TCAGAATAGAGAAATTAAGA+GGG - Chr1:2955779-2955798 MsG0180000215.01.T01:intron 25.0%
! TTACTATTTCCTGTTTGAAA+AGG + Chr1:2958195-2958214 None:intergenic 25.0%
! TTTCACAAAATTAGGAAATG+GGG + Chr1:2960372-2960391 None:intergenic 25.0%
! TTTGTTTGCATAAGCTATTT+AGG + Chr1:2958921-2958940 None:intergenic 25.0%
!! AATATAATTTGCCATCTAGT+GGG + Chr1:2959963-2959982 None:intergenic 25.0%
!! CGATTTTCTTTTATGAATCA+AGG + Chr1:2957307-2957326 None:intergenic 25.0%
!! GTTATTCTCTGCATTTTTAA+GGG + Chr1:2957504-2957523 None:intergenic 25.0%
!! TAAGATTTTTGAACTGGAAT+TGG + Chr1:2955962-2955981 None:intergenic 25.0%
!! TATTCACTCCTTTTATCAAT+TGG + Chr1:2954327-2954346 None:intergenic 25.0%
!! TGATTGACTTAATTAGAACA+GGG - Chr1:2955806-2955825 MsG0180000215.01.T01:intron 25.0%
!! TGGATATCATAAAATGCTTT+TGG - Chr1:2957622-2957641 MsG0180000215.01.T01:intron 25.0%
!! TGTTATTCTCTGCATTTTTA+AGG + Chr1:2957505-2957524 None:intergenic 25.0%
!! TTGATTGACTTAATTAGAAC+AGG - Chr1:2955805-2955824 MsG0180000215.01.T01:intron 25.0%
!!! AATACTACTATAGCCTTTTT+TGG - Chr1:2961313-2961332 MsG0180000215.01.T01:CDS 25.0%
!!! AGTATTGATTTGGAATTGAT+TGG - Chr1:2957478-2957497 MsG0180000215.01.T01:intron 25.0%
!!! ATGATTTTATTTTCCTCGAT+CGG - Chr1:2954703-2954722 MsG0180000215.01.T01:intron 25.0%
!!! CAATACTTTTTGGTAAAGTT+AGG + Chr1:2957465-2957484 None:intergenic 25.0%
!!! CTCCTTTTTTTTTTTAGTAG+TGG - Chr1:2955007-2955026 MsG0180000215.01.T01:CDS 25.0%
!!! GAGAGAGTATAATTTTATTC+AGG + Chr1:2955940-2955959 None:intergenic 25.0%
!!! TCTAAGATGTTTATCTTTTG+AGG - Chr1:2956929-2956948 MsG0180000215.01.T01:CDS 25.0%
!!! TTCATTATTTTTGTTTGACC+AGG - Chr1:2956510-2956529 MsG0180000215.01.T01:CDS 25.0%
!!! TTTTAAAAGATGATACCATG+TGG - Chr1:2956105-2956124 MsG0180000215.01.T01:intron 25.0%
!!! TTTTTTTGACAAAGAGTAGA+AGG + Chr1:2959267-2959286 None:intergenic 25.0%
!!! TTTTTTTTTTTAGTAGTGGC+CGG - Chr1:2955011-2955030 MsG0180000215.01.T01:CDS 25.0%
AAAAGAGGACGTAAATGATT+GGG + Chr1:2958503-2958522 None:intergenic 30.0%
AAAAGCTTCCCATAAAAAGA+CGG - Chr1:2959916-2959935 MsG0180000215.01.T01:intron 30.0%
AAACAACTTGTCCAAATTCA+AGG + Chr1:2954361-2954380 None:intergenic 30.0%
AAACCTATCCAATTATGAGT+TGG - Chr1:2958098-2958117 MsG0180000215.01.T01:intron 30.0%
AAATGTCATAGCAGTAGAAA+AGG + Chr1:2959106-2959125 None:intergenic 30.0%
AATCATCTGTTCTTTCATCA+TGG - Chr1:2957787-2957806 MsG0180000215.01.T01:intron 30.0%
AATGTGAGAAAATGAGAGAA+TGG - Chr1:2954150-2954169 MsG0180000215.01.T01:CDS 30.0%
ACAGATCAATCAATCTCAAA+TGG - Chr1:2960861-2960880 MsG0180000215.01.T01:intron 30.0%
AGAGAAGGAAAAAAGAAAAG+AGG - Chr1:2954898-2954917 MsG0180000215.01.T01:CDS 30.0%
AGTAAAATTGGAAGCAAATG+GGG - Chr1:2956906-2956925 MsG0180000215.01.T01:CDS 30.0%
AGTGTTTGAAAAGAGAAGAA+TGG - Chr1:2954771-2954790 MsG0180000215.01.T01:intron 30.0%
ATAAAGGGAGAAACACTATT+TGG + Chr1:2958675-2958694 None:intergenic 30.0%
ATAATCTTTGTCTTGCAGTT+TGG + Chr1:2959458-2959477 None:intergenic 30.0%
ATACATGATACTGGAAATTG+AGG + Chr1:2957570-2957589 None:intergenic 30.0%
ATGATATGGCAGAATTCTAT+TGG + Chr1:2955522-2955541 None:intergenic 30.0%
CAAGTAAAATTGGAAGCAAA+TGG - Chr1:2956904-2956923 MsG0180000215.01.T01:CDS 30.0%
CATGCTTGAATTAGAAATTG+GGG + Chr1:2955910-2955929 None:intergenic 30.0%
CTTGTTTAGATACATGATAC+TGG + Chr1:2957579-2957598 None:intergenic 30.0%
GACATGCTTGAATTAGAAAT+TGG + Chr1:2955912-2955931 None:intergenic 30.0%
GACTGAAGTCATAATTTGAA+AGG + Chr1:2960216-2960235 None:intergenic 30.0%
GATTGTCTATAACATTCAGT+AGG - Chr1:2961052-2961071 MsG0180000215.01.T01:intron 30.0%
GGAAATAGTAATGAAGTTGA+AGG - Chr1:2958204-2958223 MsG0180000215.01.T01:intron 30.0%
GGAGATCATCATTTACAATA+TGG - Chr1:2957826-2957845 MsG0180000215.01.T01:intron 30.0%
GGCCACTACTAAAAAAAAAA+AGG + Chr1:2955012-2955031 None:intergenic 30.0%
GGGATGATCTTAATCTTTAA+AGG - Chr1:2955266-2955285 MsG0180000215.01.T01:CDS 30.0%
GGTATGTTTATCCTTGAATT+TGG - Chr1:2954347-2954366 MsG0180000215.01.T01:CDS 30.0%
GTGTTTGAAAAGAGAAGAAT+GGG - Chr1:2954772-2954791 MsG0180000215.01.T01:intron 30.0%
GTTTCTCTGATCATACTAAT+TGG + Chr1:2958129-2958148 None:intergenic 30.0%
TAAAGGGAGAAACACTATTT+GGG + Chr1:2958674-2958693 None:intergenic 30.0%
TAAATGTGTGTTTGGATTGA+TGG - Chr1:2956961-2956980 MsG0180000215.01.T01:CDS 30.0%
TAACAGCCTAACTTTATAGA+GGG + Chr1:2954403-2954422 None:intergenic 30.0%
TAACCAACTCATAATTGGAT+AGG + Chr1:2958104-2958123 None:intergenic 30.0%
TAGCAAGTAAGTTACTTGAA+AGG - Chr1:2954230-2954249 MsG0180000215.01.T01:intron 30.0%
TAGTACTTGGGTTATATGAA+AGG - Chr1:2953832-2953851 MsG0180000215.01.T01:three_prime_UTR 30.0%
TATGTTTGGATGAAAGTTCT+CGG + Chr1:2957351-2957370 None:intergenic 30.0%
TCAAAAGCTAAATGTGTGTT+TGG - Chr1:2956953-2956972 MsG0180000215.01.T01:CDS 30.0%
TGAATCTAAAAGTTTGAGCA+AGG + Chr1:2959222-2959241 None:intergenic 30.0%
TGATATCCCTCTATAAAGTT+AGG - Chr1:2954394-2954413 MsG0180000215.01.T01:CDS 30.0%
TGTGACATCGAAAATTGATA+TGG + Chr1:2959431-2959450 None:intergenic 30.0%
TGTTAAACAAATTGGACCAA+TGG - Chr1:2954652-2954671 MsG0180000215.01.T01:intron 30.0%
TTAACAGCCTAACTTTATAG+AGG + Chr1:2954404-2954423 None:intergenic 30.0%
TTACACATGACAAGTAATTG+AGG - Chr1:2955731-2955750 MsG0180000215.01.T01:intron 30.0%
TTAGAGTATGTTTGGATGAA+GGG - Chr1:2957154-2957173 MsG0180000215.01.T01:intron 30.0%
TTAGTATCAGTATGGATGTA+TGG + Chr1:2958775-2958794 None:intergenic 30.0%
TTATTATTTGAGAGCCCATT+AGG + Chr1:2954847-2954866 None:intergenic 30.0%
TTCAACTTCGATGATATTGA+AGG - Chr1:2957961-2957980 MsG0180000215.01.T01:intron 30.0%
TTGAATTCAATGGCTAAAAC+AGG + Chr1:2959842-2959861 None:intergenic 30.0%
! AAATTGGTTTCGTTCAGAAA+TGG - Chr1:2956222-2956241 MsG0180000215.01.T01:CDS 30.0%
! AAGAGGAAAATAATAATGGG+AGG - Chr1:2954915-2954934 MsG0180000215.01.T01:CDS 30.0%
! AAGGTAGAAACTTTTACAGA+AGG + Chr1:2960197-2960216 None:intergenic 30.0%
! AAGGTTGATCATATTCTGAT+TGG - Chr1:2961207-2961226 MsG0180000215.01.T01:CDS 30.0%
! AGACAAGTATCAGTTTTCTA+GGG + Chr1:2958290-2958309 None:intergenic 30.0%
! AGAGGAAAATAATAATGGGA+GGG - Chr1:2954916-2954935 MsG0180000215.01.T01:CDS 30.0%
! ATATTCTGATTGGTTAAGGT+TGG - Chr1:2961217-2961236 MsG0180000215.01.T01:CDS 30.0%
! ATGTAAAGCATTCATTTAGG+TGG - Chr1:2954542-2954561 MsG0180000215.01.T01:intron 30.0%
! ATTGTCCACGATTTTAAACA+GGG - Chr1:2955057-2955076 MsG0180000215.01.T01:CDS 30.0%
! CAATATAATTTGCCATCTAG+TGG + Chr1:2959964-2959983 None:intergenic 30.0%
! CCAATTTGTTTAACAAAGGA+GGG + Chr1:2954647-2954666 None:intergenic 30.0%
! GATCATATTCTGATTGGTTA+AGG - Chr1:2961213-2961232 MsG0180000215.01.T01:CDS 30.0%
! TAAGCTCTGGCATAAATATA+AGG + Chr1:2958338-2958357 None:intergenic 30.0%
! TAGACAAGTATCAGTTTTCT+AGG + Chr1:2958291-2958310 None:intergenic 30.0%
! TAGACGTAAGATTTTTGAAC+TGG + Chr1:2955968-2955987 None:intergenic 30.0%
! TATTGTCCACGATTTTAAAC+AGG - Chr1:2955056-2955075 MsG0180000215.01.T01:CDS 30.0%
! TCCAATTTGTTTAACAAAGG+AGG + Chr1:2954648-2954667 None:intergenic 30.0%
! TGCATGTAAAGCATTCATTT+AGG - Chr1:2954539-2954558 MsG0180000215.01.T01:intron 30.0%
! TGGTCCAATTTGTTTAACAA+AGG + Chr1:2954651-2954670 None:intergenic 30.0%
! TTTAGAGTATGTTTGGATGA+AGG - Chr1:2957153-2957172 MsG0180000215.01.T01:intron 30.0%
!! ATGATGTCAATTTGTTGCTT+TGG - Chr1:2957602-2957621 MsG0180000215.01.T01:intron 30.0%
!! ATTAGCTTTAAACCACCAAA+AGG + Chr1:2953930-2953949 None:intergenic 30.0%
!! CGTGATAATGACATCAATTT+TGG - Chr1:2960680-2960699 MsG0180000215.01.T01:intron 30.0%
!! GCATATATCTGGAAGTATTA+TGG + Chr1:2959739-2959758 None:intergenic 30.0%
!! GTTTTGGTAAAACTACAGTT+TGG - Chr1:2957006-2957025 MsG0180000215.01.T01:CDS 30.0%
!!! ATTTTTTTGGGTGTTTTCTG+AGG - Chr1:2954049-2954068 MsG0180000215.01.T01:CDS 30.0%
!!! TCTCAAATGGAGATTTTTTG+TGG - Chr1:2960874-2960893 MsG0180000215.01.T01:intron 30.0%
!!! TTTTTTTTTTAGTAGTGGCC+GGG - Chr1:2955012-2955031 MsG0180000215.01.T01:CDS 30.0%
AAAATCGTGGACAATATGCA+AGG + Chr1:2955052-2955071 None:intergenic 35.0%
AAAGCTTCCCATAAAAAGAC+GGG - Chr1:2959917-2959936 MsG0180000215.01.T01:intron 35.0%
AAATGATCCCCAATATGAGA+TGG + Chr1:2953743-2953762 None:intergenic 35.0%
AAGGTCTTGACCATCAAATT+GGG - Chr1:2960771-2960790 MsG0180000215.01.T01:intron 35.0%
ACCAAAGAGAGAGAGATTAA+TGG - Chr1:2956654-2956673 MsG0180000215.01.T01:CDS 35.0%
ACCGGATTTCTTGAATTCAA+TGG + Chr1:2959852-2959871 None:intergenic 35.0%
ACTAGGACTTAGTATCAGTA+TGG + Chr1:2958783-2958802 None:intergenic 35.0%
AGAAATTACCAGAGATTGAG+AGG + Chr1:2956749-2956768 None:intergenic 35.0%
AGAATAGTTCAAATCTACCC+AGG + Chr1:2958817-2958836 None:intergenic 35.0%
AGAGGAAAATGATGTTCGAT+AGG - Chr1:2954958-2954977 MsG0180000215.01.T01:CDS 35.0%
AGGAACAGAGAACAAGAATA+TGG - Chr1:2955751-2955770 MsG0180000215.01.T01:intron 35.0%
AGGAATGACAAAATATTCCG+TGG - Chr1:2953857-2953876 MsG0180000215.01.T01:three_prime_UTR 35.0%
AGGTTTCTTTGGCATATATC+TGG + Chr1:2959750-2959769 None:intergenic 35.0%
AGTAGAAAAGGTCTCAAACT+TGG + Chr1:2959094-2959113 None:intergenic 35.0%
AGTGTTTCTCCCTTTATGTA+TGG - Chr1:2958678-2958697 MsG0180000215.01.T01:intron 35.0%
ATAAAAGAGAGCTATCTTCC+CGG + Chr1:2954086-2954105 None:intergenic 35.0%
ATAATTTGAAGGGAGAACAC+TGG - Chr1:2959483-2959502 MsG0180000215.01.T01:intron 35.0%
ATAGAGGGATATCATCACAA+CGG + Chr1:2954388-2954407 None:intergenic 35.0%
ATATCATAAGTCCCACTAGA+TGG - Chr1:2959996-2960015 MsG0180000215.01.T01:intron 35.0%
ATATGAACCACTGACATTGA+AGG + Chr1:2958551-2958570 None:intergenic 35.0%
ATCAAAACCTTCAATGTCAG+TGG - Chr1:2958541-2958560 MsG0180000215.01.T01:intron 35.0%
ATCTGTTCTTTCATCATGGA+TGG - Chr1:2957791-2957810 MsG0180000215.01.T01:intron 35.0%
ATCTTCTTGAGAAACTGATC+TGG - Chr1:2958628-2958647 MsG0180000215.01.T01:intron 35.0%
ATGAAGAAGTTCAATGTCAG+TGG - Chr1:2960395-2960414 MsG0180000215.01.T01:intron 35.0%
CCAAAGAGAGAGAGATTAAT+GGG - Chr1:2956655-2956674 MsG0180000215.01.T01:CDS 35.0%
CCCTCCTTTGTTAAACAAAT+TGG - Chr1:2954644-2954663 MsG0180000215.01.T01:intron 35.0%
CTTGGGTTATATGAAAGGAA+AGG - Chr1:2953837-2953856 MsG0180000215.01.T01:three_prime_UTR 35.0%
GAAAAGAGGACGTAAATGAT+TGG + Chr1:2958504-2958523 None:intergenic 35.0%
GAACTGTCTTTGTGTTCATT+CGG - Chr1:2953712-2953731 MsG0180000215.01.T01:three_prime_UTR 35.0%
GACAAGAGTAGTAGTAGAAA+AGG + Chr1:2959200-2959219 None:intergenic 35.0%
GAGAGAAGGAAAAAGAAAAG+AGG - Chr1:2954940-2954959 MsG0180000215.01.T01:CDS 35.0%
GAGGAAAATGATGTTCGATA+GGG - Chr1:2954959-2954978 MsG0180000215.01.T01:CDS 35.0%
GATGTCATTATCACGAACAA+AGG + Chr1:2960675-2960694 None:intergenic 35.0%
GCCATTGAATTCAAGAAATC+CGG - Chr1:2959848-2959867 MsG0180000215.01.T01:intron 35.0%
GCTCTCTAATGCATTTGATT+TGG - Chr1:2953804-2953823 MsG0180000215.01.T01:three_prime_UTR 35.0%
GTACAATAGAGATAGAGATG+AGG + Chr1:2955639-2955658 None:intergenic 35.0%
GTAGAAAAGGTCTCAAACTT+GGG + Chr1:2959093-2959112 None:intergenic 35.0%
GTGATGTTCAGAAGAAAATG+AGG - Chr1:2958028-2958047 MsG0180000215.01.T01:intron 35.0%
TACCATCCTCCATACATAAA+GGG + Chr1:2958690-2958709 None:intergenic 35.0%
TAGAAAAGGTCTCAAACTTG+GGG + Chr1:2959092-2959111 None:intergenic 35.0%
TAGCGATGATACAACTAACT+GGG + Chr1:2960963-2960982 None:intergenic 35.0%
TCAACTACTTCGAAGAAGAT+GGG - Chr1:2959878-2959897 MsG0180000215.01.T01:intron 35.0%
TGGAGTGATCTTTCAATACT+TGG - Chr1:2958860-2958879 MsG0180000215.01.T01:intron 35.0%
TGGTCTAACCAACTCATAAT+TGG + Chr1:2958109-2958128 None:intergenic 35.0%
TGGTGACTTTGACGAAATTA+CGG - Chr1:2956981-2957000 MsG0180000215.01.T01:CDS 35.0%
TGTGACTTTAAGCACTAATG+TGG - Chr1:2954435-2954454 MsG0180000215.01.T01:CDS 35.0%
TTAAAGAGGTGATAGAAGTG+AGG + Chr1:2956715-2956734 None:intergenic 35.0%
TTACCATCCTCCATACATAA+AGG + Chr1:2958691-2958710 None:intergenic 35.0%
TTAGCGATGATACAACTAAC+TGG + Chr1:2960964-2960983 None:intergenic 35.0%
TTCAACTACTTCGAAGAAGA+TGG - Chr1:2959877-2959896 MsG0180000215.01.T01:intron 35.0%
TTCCTGTTTGAAAAGGAACA+TGG + Chr1:2958188-2958207 None:intergenic 35.0%
TTTGGTAAAGTTAGGGCTAT+CGG + Chr1:2957457-2957476 None:intergenic 35.0%
! AAACCTTACCCGTCTTTTTA+TGG + Chr1:2959928-2959947 None:intergenic 35.0%
! AACAATTCACACCTTTTGTG+GGG - Chr1:2960640-2960659 MsG0180000215.01.T01:intron 35.0%
! AACCTTACCCGTCTTTTTAT+GGG + Chr1:2959927-2959946 None:intergenic 35.0%
! AAGCGTAACTTCTGTTTTGT+AGG + Chr1:2960564-2960583 None:intergenic 35.0%
! AAGGCTCAGCTTTATGTTAT+TGG - Chr1:2953614-2953633 MsG0180000215.01.T01:three_prime_UTR 35.0%
! ACAATCCCTGTTTAAAATCG+TGG + Chr1:2955065-2955084 None:intergenic 35.0%
! ACGTTAAGCTTCTTTCCTTT+TGG - Chr1:2953912-2953931 MsG0180000215.01.T01:CDS 35.0%
! AGAACAATTCACACCTTTTG+TGG - Chr1:2960638-2960657 MsG0180000215.01.T01:intron 35.0%
! AGATTTTGCAAAACCTGTAG+AGG + Chr1:2953780-2953799 None:intergenic 35.0%
! AGGCTATAGTAGTATTGAAC+CGG + Chr1:2961309-2961328 None:intergenic 35.0%
! ATCCTCACCATTTAAAATCG+TGG + Chr1:2955150-2955169 None:intergenic 35.0%
! ATTTGATGGACAAAACCATC+TGG + Chr1:2957688-2957707 None:intergenic 35.0%
! CTCATGTTAAGTGTCATTCA+AGG - Chr1:2961122-2961141 MsG0180000215.01.T01:intron 35.0%
! GAACAATTCACACCTTTTGT+GGG - Chr1:2960639-2960658 MsG0180000215.01.T01:intron 35.0%
! GAGCTAACTTTAGGTTTCTT+TGG + Chr1:2959761-2959780 None:intergenic 35.0%
! GTGGTTTAAAGCTAATGTTG+CGG - Chr1:2953934-2953953 MsG0180000215.01.T01:CDS 35.0%
! TATGTTTGGATGAAGGGTTT+TGG - Chr1:2957160-2957179 MsG0180000215.01.T01:intron 35.0%
! TTAAGCTTCTTTCCTTTTGG+TGG - Chr1:2953915-2953934 MsG0180000215.01.T01:CDS 35.0%
! TTCTCAGCTTTGTATATGCT+GGG + Chr1:2957411-2957430 None:intergenic 35.0%
! TTTACAATATGGCGACCTTT+TGG - Chr1:2957837-2957856 MsG0180000215.01.T01:intron 35.0%
! TTTCTCAGCTTTGTATATGC+TGG + Chr1:2957412-2957431 None:intergenic 35.0%
!! ATTAATGGGTTGTGAGTGTA+AGG - Chr1:2956669-2956688 MsG0180000215.01.T01:CDS 35.0%
!! GATTTGGTTTGCTAGTACTT+GGG - Chr1:2953820-2953839 MsG0180000215.01.T01:three_prime_UTR 35.0%
!! TGATTTGGTTTGCTAGTACT+TGG - Chr1:2953819-2953838 MsG0180000215.01.T01:three_prime_UTR 35.0%
!! TGCGGATTAGTTTCATTAAC+TGG - Chr1:2957721-2957740 MsG0180000215.01.T01:intron 35.0%
!! TTAATGGGTTGTGAGTGTAA+GGG - Chr1:2956670-2956689 MsG0180000215.01.T01:CDS 35.0%
!! TTTATGGGAAGCTTTTGACT+TGG + Chr1:2959912-2959931 None:intergenic 35.0%
!!! AGATGGTTTTGTCCATCAAA+TGG - Chr1:2957687-2957706 MsG0180000215.01.T01:intron 35.0%
!!! ATAGCCTTTTTTGGTCACAT+TGG - Chr1:2961322-2961341 MsG0180000215.01.T01:CDS 35.0%
!!! CTTTTGGTTTTCAGATACGA+GGG - Chr1:2957853-2957872 MsG0180000215.01.T01:intron 35.0%
!!! TTATGGGAAGCTTTTGACTT+GGG + Chr1:2959911-2959930 None:intergenic 35.0%
!!! TTTTTTTTTAGTAGTGGCCG+GGG - Chr1:2955013-2955032 MsG0180000215.01.T01:CDS 35.0%
AAAGAACAGCTGCATGTACA+TGG + Chr1:2953490-2953509 None:intergenic 40.0%
AATCCTGTATAGAAGTGGGA+AGG - Chr1:2958408-2958427 MsG0180000215.01.T01:intron 40.0%
ACCAATAGAATTCTGCCACA+TGG + Chr1:2956123-2956142 None:intergenic 40.0%
ACCATGTGGCAGAATTCTAT+TGG - Chr1:2956119-2956138 MsG0180000215.01.T01:intron 40.0%
ACTAGCTGAACATTCTTTGC+AGG + Chr1:2958160-2958179 None:intergenic 40.0%
ACTTGCCAAGTATTTCCACT+AGG + Chr1:2957748-2957767 None:intergenic 40.0%
AGAGATTGAGAGGTTGAAGA+AGG + Chr1:2956739-2956758 None:intergenic 40.0%
AGGTTGAAGAAGGGTTAAAG+AGG + Chr1:2956729-2956748 None:intergenic 40.0%
AGTAGTTACGAGGAGAAACA+CGG + Chr1:2956362-2956381 None:intergenic 40.0%
AGTGGATCATACACTTTGGT+GGG - Chr1:2960413-2960432 MsG0180000215.01.T01:intron 40.0%
AGTGTGATGTAGAAGCTTCT+TGG + Chr1:2959167-2959186 None:intergenic 40.0%
ATGACAAGAACCAAAAGCAG+TGG + Chr1:2961021-2961040 None:intergenic 40.0%
ATGGAATGTTCTCGTCAAAG+TGG - Chr1:2954671-2954690 MsG0180000215.01.T01:intron 40.0%
ATGTACATGCAGCTGTTCTT+TGG - Chr1:2953489-2953508 MsG0180000215.01.T01:three_prime_UTR 40.0%
ATTGCCAATCCAAACATGCA+CGG - Chr1:2957072-2957091 MsG0180000215.01.T01:intron 40.0%
ATTGCTGAGGTTGGAAAAGA+TGG - Chr1:2959650-2959669 MsG0180000215.01.T01:intron 40.0%
CAACTACTTCGAAGAAGATG+GGG - Chr1:2959879-2959898 MsG0180000215.01.T01:intron 40.0%
CAAGAACGTTAGCAAGTAGA+TGG + Chr1:2960833-2960852 None:intergenic 40.0%
CAATACCCGCACATACAAAA+GGG + Chr1:2953994-2954013 None:intergenic 40.0%
CAGAGTTTACAATCCAACAC+TGG + Chr1:2960601-2960620 None:intergenic 40.0%
CAGCAATCCTGTATAGAAGT+GGG - Chr1:2958404-2958423 MsG0180000215.01.T01:intron 40.0%
CATACAAGTCACACTCTATG+TGG - Chr1:2959536-2959555 MsG0180000215.01.T01:intron 40.0%
CATGATACTGGAAATTGAGG+AGG + Chr1:2957567-2957586 None:intergenic 40.0%
CATGGATGGTCAACATTTGT+GGG - Chr1:2957805-2957824 MsG0180000215.01.T01:intron 40.0%
CATTTCACTGCGCAAGTATT+TGG - Chr1:2957883-2957902 MsG0180000215.01.T01:intron 40.0%
CCCATTAATCTCTCTCTCTT+TGG + Chr1:2956658-2956677 None:intergenic 40.0%
CCTAGTTAATGAGTCAACCT+GGG - Chr1:2958797-2958816 MsG0180000215.01.T01:intron 40.0%
CCTCGTATCTGAAAACCAAA+AGG + Chr1:2957855-2957874 None:intergenic 40.0%
CGTGGCAATAGCATAAAAGT+TGG - Chr1:2959578-2959597 MsG0180000215.01.T01:intron 40.0%
CGTTTCTCATTATGTGATGC+AGG - Chr1:2960724-2960743 MsG0180000215.01.T01:intron 40.0%
CTAGATCGCTGAACAAGTTA+AGG - Chr1:2961188-2961207 MsG0180000215.01.T01:intron 40.0%
CTGCACTTTGAGCTAACTTT+AGG + Chr1:2959770-2959789 None:intergenic 40.0%
CTGCTCTAACATCTTTCATC+CGG - Chr1:2961287-2961306 MsG0180000215.01.T01:CDS 40.0%
CTTGAGAAACTGATCTGGTT+GGG - Chr1:2958633-2958652 MsG0180000215.01.T01:intron 40.0%
CTTGTATGCACTCTAGTTGT+TGG + Chr1:2959524-2959543 None:intergenic 40.0%
CTTTGACGAGAACATTCCAT+TGG + Chr1:2954671-2954690 None:intergenic 40.0%
GAAAATGAGAGAATGGCAGA+AGG - Chr1:2954157-2954176 MsG0180000215.01.T01:CDS 40.0%
GAAAGAGACAAGGAAAGTCA+GGG - Chr1:2954981-2955000 MsG0180000215.01.T01:CDS 40.0%
GAAGGTCTTGACCATCAAAT+TGG - Chr1:2960770-2960789 MsG0180000215.01.T01:intron 40.0%
GAGATTGAGAGGTTGAAGAA+GGG + Chr1:2956738-2956757 None:intergenic 40.0%
GATGACCACGATATTCTTAG+CGG - Chr1:2958433-2958452 MsG0180000215.01.T01:intron 40.0%
GTAAGATTTGGCAGCTTGTA+AGG - Chr1:2953690-2953709 MsG0180000215.01.T01:three_prime_UTR 40.0%
GTGATGCAGGTTCATATATC+CGG - Chr1:2960737-2960756 MsG0180000215.01.T01:intron 40.0%
GTTTCACATGCCCAATTTGA+TGG + Chr1:2960784-2960803 None:intergenic 40.0%
GTTTCATTAACTGGTCCTAG+TGG - Chr1:2957730-2957749 MsG0180000215.01.T01:intron 40.0%
GTTTCTCCCTTTATGTATGG+AGG - Chr1:2958681-2958700 MsG0180000215.01.T01:intron 40.0%
TAAACAGGGATTGTTGCTCA+TGG - Chr1:2955071-2955090 MsG0180000215.01.T01:CDS 40.0%
TAGACGCATTATTCCATCGA+AGG - Chr1:2953595-2953614 MsG0180000215.01.T01:three_prime_UTR 40.0%
TAGAGATAGAGATGAGGTTG+CGG + Chr1:2955633-2955652 None:intergenic 40.0%
TCATGGATGGTCAACATTTG+TGG - Chr1:2957804-2957823 MsG0180000215.01.T01:intron 40.0%
TCCTAGTTAATGAGTCAACC+TGG - Chr1:2958796-2958815 MsG0180000215.01.T01:intron 40.0%
TCTCAACCTATGCTAGTTGT+CGG - Chr1:2955683-2955702 MsG0180000215.01.T01:intron 40.0%
TCTTCAACACGATGTTTCCT+CGG + Chr1:2960269-2960288 None:intergenic 40.0%
TCTTGAGAAACTGATCTGGT+TGG - Chr1:2958632-2958651 MsG0180000215.01.T01:intron 40.0%
TGAAGATGAACTAAGTTCCC+AGG - Chr1:2960283-2960302 MsG0180000215.01.T01:intron 40.0%
TGACTTTGACGAAATTACGG+TGG - Chr1:2956984-2957003 MsG0180000215.01.T01:CDS 40.0%
TGAGTTTGACGAAATCACAG+TGG + Chr1:2957053-2957072 None:intergenic 40.0%
TGATACAACTAACTGGGATC+TGG + Chr1:2960957-2960976 None:intergenic 40.0%
TGATGCAGGTTCATATATCC+GGG - Chr1:2960738-2960757 MsG0180000215.01.T01:intron 40.0%
TGTCAGTGGATCATACACTT+TGG - Chr1:2960409-2960428 MsG0180000215.01.T01:intron 40.0%
TGTCAGTGGTTCATATACTC+TGG - Chr1:2958555-2958574 MsG0180000215.01.T01:intron 40.0%
TTAATGCAGAGAGTTCCAGA+TGG - Chr1:2957670-2957689 MsG0180000215.01.T01:intron 40.0%
TTCCCATAAAAAGACGGGTA+AGG - Chr1:2959922-2959941 MsG0180000215.01.T01:intron 40.0%
TTCTTCAACCTCTCAATCTC+TGG - Chr1:2956738-2956757 MsG0180000215.01.T01:CDS 40.0%
TTGAAAAGAGAAGAATGGGC+TGG - Chr1:2954776-2954795 MsG0180000215.01.T01:intron 40.0%
TTGAGAAACTGATCTGGTTG+GGG - Chr1:2958634-2958653 MsG0180000215.01.T01:intron 40.0%
TTGCTGAGGTTGGAAAAGAT+GGG - Chr1:2959651-2959670 MsG0180000215.01.T01:intron 40.0%
TTGGTAAAGTTAGGGCTATC+GGG + Chr1:2957456-2957475 None:intergenic 40.0%
TTTGGATGAAAGTTCTCGGA+GGG + Chr1:2957347-2957366 None:intergenic 40.0%
! ACAATTCACACCTTTTGTGG+GGG - Chr1:2960641-2960660 MsG0180000215.01.T01:intron 40.0%
! AGCCACGATTTTAAATGGTG+AGG - Chr1:2955145-2955164 MsG0180000215.01.T01:CDS 40.0%
! ATCTACTAAGCCACTGCTTT+TGG - Chr1:2961008-2961027 MsG0180000215.01.T01:intron 40.0%
! CAAAACCCTTTTGTATGTGC+GGG - Chr1:2953986-2954005 MsG0180000215.01.T01:CDS 40.0%
! CAGCTAGCCACGATTTTAAA+TGG - Chr1:2955140-2955159 MsG0180000215.01.T01:CDS 40.0%
! CCAAAACCCTTTTGTATGTG+CGG - Chr1:2953985-2954004 MsG0180000215.01.T01:CDS 40.0%
! CGTAACTTCTGTTTTGTAGG+CGG + Chr1:2960561-2960580 None:intergenic 40.0%
! GTAACTTCTGTTTTGTAGGC+GGG + Chr1:2960560-2960579 None:intergenic 40.0%
! GTCCATGTTCCTTTTCAAAC+AGG - Chr1:2958183-2958202 MsG0180000215.01.T01:intron 40.0%
! TAACTTCTGTTTTGTAGGCG+GGG + Chr1:2960559-2960578 None:intergenic 40.0%
! TCAGCAAGAGCTTTGTGTTA+AGG + Chr1:2959375-2959394 None:intergenic 40.0%
! TGACGAAATTACGGTGGTTT+TGG - Chr1:2956990-2957009 MsG0180000215.01.T01:CDS 40.0%
! TGTTATTGGTTGCAGTCTTC+AGG - Chr1:2953628-2953647 MsG0180000215.01.T01:three_prime_UTR 40.0%
! TTTTCCTCGATCGGTAAGTA+TGG - Chr1:2954712-2954731 MsG0180000215.01.T01:intron 40.0%
!! AAGGGTTTTGGCACCAATTA+TGG + Chr1:2953976-2953995 None:intergenic 40.0%
!! GGTTTTGTCCATCAAATGGA+GGG - Chr1:2957691-2957710 MsG0180000215.01.T01:intron 40.0%
!!! CCTTTTGGTTTTCAGATACG+AGG - Chr1:2957852-2957871 MsG0180000215.01.T01:intron 40.0%
!!! CCTTTTTTGGTCACATTGGA+GGG - Chr1:2961326-2961345 MsG0180000215.01.T01:CDS 40.0%
!!! TACAAGCTAGTTTTCCAACC+TGG + Chr1:2959685-2959704 None:intergenic 40.0%
!!! TATGGGAAGCTTTTGACTTG+GGG + Chr1:2959910-2959929 None:intergenic 40.0%
!!! TGGTTTTGTCCATCAAATGG+AGG - Chr1:2957690-2957709 MsG0180000215.01.T01:intron 40.0%
AAACAAAGACAGCTGTACCG+AGG - Chr1:2960249-2960268 MsG0180000215.01.T01:intron 45.0%
AACTCTGTTCCAGATGCCAA+AGG - Chr1:2960614-2960633 MsG0180000215.01.T01:intron 45.0%
AAGCTCCGCTAAGAATATCG+TGG + Chr1:2958441-2958460 None:intergenic 45.0%
ACAAGTCACACTCTATGTGG+AGG - Chr1:2959539-2959558 MsG0180000215.01.T01:intron 45.0%
ACATAAAGCTGAGCCTTCGA+TGG + Chr1:2953611-2953630 None:intergenic 45.0%
ACGAAATCACAGTGGTAGTC+TGG + Chr1:2957045-2957064 None:intergenic 45.0%
AGGACAGAAAAGTGATGCTG+AGG - Chr1:2957981-2958000 MsG0180000215.01.T01:intron 45.0%
ATACAGGATTGCTGCATCTG+TGG + Chr1:2958398-2958417 None:intergenic 45.0%
ATAGAGATGAGGTTGCGGTA+AGG + Chr1:2955628-2955647 None:intergenic 45.0%
ATATGCTGGGAGAGAAAGTG+AGG + Chr1:2957398-2957417 None:intergenic 45.0%
ATTACGTGTTCGCATTGCTG+AGG - Chr1:2959637-2959656 MsG0180000215.01.T01:intron 45.0%
ATTGTTCTGCCTTTGGCATC+TGG + Chr1:2960626-2960645 None:intergenic 45.0%
CAGGAGAACTCTGTTTACCA+CGG + Chr1:2953877-2953896 None:intergenic 45.0%
CAGTGGATCATACACTTTGG+TGG - Chr1:2960412-2960431 MsG0180000215.01.T01:intron 45.0%
CCAACATGCATTGAAGTGCA+AGG + Chr1:2958843-2958862 None:intergenic 45.0%
CCAATACCCGCACATACAAA+AGG + Chr1:2953995-2954014 None:intergenic 45.0%
CCCTCCAATGTGACCAAAAA+AGG + Chr1:2961329-2961348 None:intergenic 45.0%
CCTTGCACTTCAATGCATGT+TGG - Chr1:2958840-2958859 MsG0180000215.01.T01:intron 45.0%
CGAAGTAGTTGAAGCTCTAC+CGG + Chr1:2959870-2959889 None:intergenic 45.0%
CGGTGGATCCATCTCATATT+GGG - Chr1:2953732-2953751 MsG0180000215.01.T01:three_prime_UTR 45.0%
CTCCCTTTATGTATGGAGGA+TGG - Chr1:2958685-2958704 MsG0180000215.01.T01:intron 45.0%
CTCGTAACTACTCAACCCAA+AGG - Chr1:2956370-2956389 MsG0180000215.01.T01:intron 45.0%
CTGGTCCTAGTGGAAATACT+TGG - Chr1:2957740-2957759 MsG0180000215.01.T01:intron 45.0%
CTGTCTTTGTGTTCATTCGG+TGG - Chr1:2953715-2953734 MsG0180000215.01.T01:three_prime_UTR 45.0%
CTTCCTTCCCACTTCTATAC+AGG + Chr1:2958414-2958433 None:intergenic 45.0%
GATGCAGGTTCATATATCCG+GGG - Chr1:2960739-2960758 MsG0180000215.01.T01:intron 45.0%
GCAAGTTCGTTTAGTTGAGC+AGG - Chr1:2957762-2957781 MsG0180000215.01.T01:intron 45.0%
GCAGCAATCCTGTATAGAAG+TGG - Chr1:2958403-2958422 MsG0180000215.01.T01:intron 45.0%
GCATGTACATGGACATGGAA+AGG + Chr1:2953479-2953498 None:intergenic 45.0%
GGAAAGAGACAAGGAAAGTC+AGG - Chr1:2954980-2954999 MsG0180000215.01.T01:CDS 45.0%
GGTGGATCCATCTCATATTG+GGG - Chr1:2953733-2953752 MsG0180000215.01.T01:three_prime_UTR 45.0%
GGTGTGAATTGTTCTGCCTT+TGG + Chr1:2960633-2960652 None:intergenic 45.0%
GTGAAATGTTGGACAGGTAG+AGG - Chr1:2961078-2961097 MsG0180000215.01.T01:intron 45.0%
GTGCAAACCATCTCTGTTCA+TGG + Chr1:2956033-2956052 None:intergenic 45.0%
GTGCAGCAGAGAACTGATAT+GGG + Chr1:2960532-2960551 None:intergenic 45.0%
GTTACGCTTCGCAATTCAAG+AGG - Chr1:2960575-2960594 MsG0180000215.01.T01:intron 45.0%
GTTCGATAGGGAAAGAGACA+AGG - Chr1:2954971-2954990 MsG0180000215.01.T01:CDS 45.0%
GTTTGGATGAAAGTTCTCGG+AGG + Chr1:2957348-2957367 None:intergenic 45.0%
TACAGGATTGCTGCATCTGT+GGG + Chr1:2958397-2958416 None:intergenic 45.0%
TACATGCAGCTGTTCTTTGG+AGG - Chr1:2953492-2953511 MsG0180000215.01.T01:three_prime_UTR 45.0%
TAGAGATGAGGTTGCGGTAA+GGG + Chr1:2955627-2955646 None:intergenic 45.0%
TAGCTCAAAGTGCAGAACGA+AGG - Chr1:2959775-2959794 MsG0180000215.01.T01:intron 45.0%
TATGCTGGGAGAGAAAGTGA+GGG + Chr1:2957397-2957416 None:intergenic 45.0%
TCAAGCACCATGAACAGAGA+TGG - Chr1:2956023-2956042 MsG0180000215.01.T01:intron 45.0%
TCAGTAGGCTCGTGAAATGT+TGG - Chr1:2961067-2961086 MsG0180000215.01.T01:intron 45.0%
TCATATATCCGGGGTTGGAA+AGG - Chr1:2960748-2960767 MsG0180000215.01.T01:intron 45.0%
TCCTCTATTTGCCCACTAGA+TGG - Chr1:2959949-2959968 MsG0180000215.01.T01:intron 45.0%
TCGGTGGATCCATCTCATAT+TGG - Chr1:2953731-2953750 MsG0180000215.01.T01:three_prime_UTR 45.0%
TCTCTGTTCATGGTGCTTGA+TGG + Chr1:2956023-2956042 None:intergenic 45.0%
TGTGCAGCAGAGAACTGATA+TGG + Chr1:2960533-2960552 None:intergenic 45.0%
TTACCAGCAATAGCCAACTC+AGG + Chr1:2958078-2958097 None:intergenic 45.0%
TTGGATGAAAGTTCTCGGAG+GGG + Chr1:2957346-2957365 None:intergenic 45.0%
! AATAATGGGAGGGAGAGAGA+AGG - Chr1:2954883-2954902 MsG0180000215.01.T01:CDS 45.0%
! CATCAGTTTGCTTCCTCTAC+AGG - Chr1:2953764-2953783 MsG0180000215.01.T01:three_prime_UTR 45.0%
! CCCAGGTTGACTCATTAACT+AGG + Chr1:2958800-2958819 None:intergenic 45.0%
! CCGCACATACAAAAGGGTTT+TGG + Chr1:2953988-2954007 None:intergenic 45.0%
! CCTTTTGTATGTGCGGGTAT+TGG - Chr1:2953992-2954011 MsG0180000215.01.T01:CDS 45.0%
! TACTTGGTGAAGATGCTGCT+TGG - Chr1:2958876-2958895 MsG0180000215.01.T01:intron 45.0%
! TCTCAAACCAGCTTTAGCCT+GGG + Chr1:2960303-2960322 None:intergenic 45.0%
! TTCTCAAACCAGCTTTAGCC+TGG + Chr1:2960304-2960323 None:intergenic 45.0%
!! AAAAGATGGGTTAGACTGCC+AGG - Chr1:2959664-2959683 MsG0180000215.01.T01:intron 45.0%
!! CTTTGGGTTGAGTAGTTACG+AGG + Chr1:2956372-2956391 None:intergenic 45.0%
!! GTTTGGATGAAGGGTTTTGG+AGG - Chr1:2957163-2957182 MsG0180000215.01.T01:intron 45.0%
!!! ATGGGAAGCTTTTGACTTGG+GGG + Chr1:2959909-2959928 None:intergenic 45.0%
!!! GCCTTTTTTGGTCACATTGG+AGG - Chr1:2961325-2961344 MsG0180000215.01.T01:CDS 45.0%
!!! AAAATTTTGAATTTATTTTT+TGG + Chr1:2955352-2955371 None:intergenic 5.0%
!!! AAATTTTGAATTTATTTTTT+GGG + Chr1:2955351-2955370 None:intergenic 5.0%
AAGACCTTCCTTTCCAACCC+CGG + Chr1:2960759-2960778 None:intergenic 50.0%
ACAGATGCACCGTGCATGTT+TGG + Chr1:2957084-2957103 None:intergenic 50.0%
ACCACCATACTTACCGATCG+AGG + Chr1:2954719-2954738 None:intergenic 50.0%
ACGTTCTCCAAAAGTTGCGC+AGG + Chr1:2953896-2953915 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + Chr1:2956421-2956440 None:intergenic 50.0%
AGAGCTATCTTCCCGGTACA+AGG + Chr1:2954079-2954098 None:intergenic 50.0%
AGGCTCGTGAAATGTTGGAC+AGG - Chr1:2961072-2961091 MsG0180000215.01.T01:intron 50.0%
ATATCCGGGGTTGGAAAGGA+AGG - Chr1:2960752-2960771 MsG0180000215.01.T01:intron 50.0%
ATGTCGTGCCCTCCATTTGA+TGG + Chr1:2957702-2957721 None:intergenic 50.0%
ATTGGGAACGACGACGATGA+CGG + Chr1:2955844-2955863 None:intergenic 50.0%
CACTCTATGTGGAGGATGGA+TGG - Chr1:2959547-2959566 MsG0180000215.01.T01:intron 50.0%
CAGCTGCATGTACATGGACA+TGG + Chr1:2953484-2953503 None:intergenic 50.0%
CAGGTTCATATATCCGGGGT+TGG - Chr1:2960743-2960762 MsG0180000215.01.T01:intron 50.0%
CGTGGACAATATGCAAGGTC+CGG + Chr1:2955047-2955066 None:intergenic 50.0%
CTAAGTTCCCAGGCTAAAGC+TGG - Chr1:2960293-2960312 MsG0180000215.01.T01:intron 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + Chr1:2956422-2956441 None:intergenic 50.0%
GAGGAAGGATGTTCCTCTGA+TGG - Chr1:2953511-2953530 MsG0180000215.01.T01:three_prime_UTR 50.0%
GCAATTCAAGAGGCCAGTGT+TGG - Chr1:2960585-2960604 MsG0180000215.01.T01:intron 50.0%
GCATAGGAGGTTATGGACGT+GGG - Chr1:2953421-2953440 MsG0180000215.01.T01:three_prime_UTR 50.0%
GGAAGTGGCATAGGAGGTTA+TGG - Chr1:2953414-2953433 MsG0180000215.01.T01:three_prime_UTR 50.0%
GGACGTGGGAAGAAGACTAT+CGG - Chr1:2953435-2953454 MsG0180000215.01.T01:three_prime_UTR 50.0%
GGATGTTCCTCTGATGGTCT+CGG - Chr1:2953517-2953536 MsG0180000215.01.T01:three_prime_UTR 50.0%
GGTAAGTATGGTGGTCAGAG+CGG - Chr1:2954724-2954743 MsG0180000215.01.T01:intron 50.0%
GTAAGGCTTGGAAGTGGCAT+AGG - Chr1:2953405-2953424 MsG0180000215.01.T01:three_prime_UTR 50.0%
GTCACACTCTATGTGGAGGA+TGG - Chr1:2959543-2959562 MsG0180000215.01.T01:intron 50.0%
GTGGACAATATGCAAGGTCC+GGG + Chr1:2955046-2955065 None:intergenic 50.0%
TACCACTGCCATCAGCTTCT+CGG + Chr1:2954752-2954771 None:intergenic 50.0%
TCCTCGATCGGTAAGTATGG+TGG - Chr1:2954715-2954734 MsG0180000215.01.T01:intron 50.0%
TGCACCGTGCATGTTTGGAT+TGG + Chr1:2957079-2957098 None:intergenic 50.0%
TGGACAATATGCAAGGTCCG+GGG + Chr1:2955045-2955064 None:intergenic 50.0%
TTGCGGTAAGGGTGAAGAAG+AGG + Chr1:2955616-2955635 None:intergenic 50.0%
! GAGTTCTCCTGCGCAACTTT+TGG - Chr1:2953886-2953905 MsG0180000215.01.T01:three_prime_UTR 50.0%
! GCCATCTAGTGGGCAAATAG+AGG + Chr1:2959953-2959972 None:intergenic 50.0%
! GGATGGATGGCTTTTGTTCG+TGG - Chr1:2959560-2959579 MsG0180000215.01.T01:intron 50.0%
! TGCAGCTGTTCTTTGGAGGA+AGG - Chr1:2953496-2953515 MsG0180000215.01.T01:three_prime_UTR 50.0%
! TTCACACCTTTTGTGGGGGA+TGG - Chr1:2960645-2960664 MsG0180000215.01.T01:intron 50.0%
!! ATGGGCTGGTATCGTACAAG+AGG - Chr1:2954790-2954809 MsG0180000215.01.T01:CDS 50.0%
!! TTCTGAGGTACGCCTTGTAC+CGG - Chr1:2954064-2954083 MsG0180000215.01.T01:CDS 50.0%
ACACGGAGCGACAGTGTTGT+TGG + Chr1:2956345-2956364 None:intergenic 55.0%
AGAGAGAGAGAGAGAGAGGG+AGG + Chr1:2956419-2956438 None:intergenic 55.0%
AGGCTTGGAAGTGGCATAGG+AGG - Chr1:2953408-2953427 MsG0180000215.01.T01:three_prime_UTR 55.0%
AGGGAGGTAAGGCTTGGAAG+TGG - Chr1:2953399-2953418 MsG0180000215.01.T01:three_prime_UTR 55.0%
CAATAGCCAACTCAGGCTCC+TGG + Chr1:2958071-2958090 None:intergenic 55.0%
CGTGTTCGCATTGCTGAGGT+TGG - Chr1:2959641-2959660 MsG0180000215.01.T01:intron 55.0%
GAGAGAGAGAGAGAGAGGGA+GGG + Chr1:2956418-2956437 None:intergenic 55.0%
GAGGGAGAGGGAGAACCTTT+GGG + Chr1:2956388-2956407 None:intergenic 55.0%
GGCATAGGAGGTTATGGACG+TGG - Chr1:2953420-2953439 MsG0180000215.01.T01:three_prime_UTR 55.0%
GGCTATCCATCCCCCACAAA+AGG + Chr1:2960654-2960673 None:intergenic 55.0%
GGCTGGTATCGTACAAGAGG+AGG - Chr1:2954793-2954812 MsG0180000215.01.T01:CDS 55.0%
TGAAAGTTCTCGGAGGGGAG+AGG + Chr1:2957341-2957360 None:intergenic 55.0%
TGAGAACCAGGAGCCTGAGT+TGG - Chr1:2958062-2958081 MsG0180000215.01.T01:intron 55.0%
TGCTAGTTGTCGGCGCTTGA+CGG - Chr1:2955693-2955712 MsG0180000215.01.T01:intron 55.0%
TTCGATTGGGGCTGGGATGA+GGG - Chr1:2953380-2953399 MsG0180000215.01.T01:three_prime_UTR 55.0%
! CAAATGGAGGGCACGACATG+CGG - Chr1:2957703-2957722 MsG0180000215.01.T01:intron 55.0%
! CTCAGGCTCCTGGTTCTCAA+TGG + Chr1:2958061-2958080 None:intergenic 55.0%
! GAGCCTGAGTTGGCTATTGC+TGG - Chr1:2958072-2958091 MsG0180000215.01.T01:intron 55.0%
! TCTGAGGTACGCCTTGTACC+GGG - Chr1:2954065-2954084 MsG0180000215.01.T01:CDS 55.0%
! TTTGACCAGGTGTTGCGCGA+AGG - Chr1:2956523-2956542 MsG0180000215.01.T01:CDS 55.0%
!! CAAGCGCCGACAACTAGCAT+AGG + Chr1:2955692-2955711 None:intergenic 55.0%
!! GATGGGTTAGACTGCCAGGT+TGG - Chr1:2959668-2959687 MsG0180000215.01.T01:intron 55.0%
AAGGTCCGGGGTTCAAACCC+CGG + Chr1:2955033-2955052 None:intergenic 60.0%
AGAGAGAGAGAGAGGGAGGG+AGG + Chr1:2956415-2956434 None:intergenic 60.0%
GAGAGAGAGAGAGGGAGGGA+GGG + Chr1:2956414-2956433 None:intergenic 60.0%
GCGAACACCGAGACCATCAG+AGG + Chr1:2953527-2953546 None:intergenic 60.0%
GGAGGGAGAGGGAGAACCTT+TGG + Chr1:2956389-2956408 None:intergenic 60.0%
GGGATGAGGGAGGTAAGGCT+TGG - Chr1:2953393-2953412 MsG0180000215.01.T01:three_prime_UTR 60.0%
GTGCGACGCCATTGAGAACC+AGG - Chr1:2958050-2958069 MsG0180000215.01.T01:intron 60.0%
GTTCGATTGGGGCTGGGATG+AGG - Chr1:2953379-2953398 MsG0180000215.01.T01:three_prime_UTR 60.0%
AGAGAGAGAGGGAGGGAGGG+AGG + Chr1:2956411-2956430 None:intergenic 65.0%
AGTGGCCGGGGTTTGAACCC+CGG - Chr1:2955025-2955044 MsG0180000215.01.T01:CDS 65.0%
CGCCGAGAAGCTGATGGCAG+TGG - Chr1:2954747-2954766 MsG0180000215.01.T01:intron 65.0%
CGGCGCTTGACGGCAACTCA+CGG - Chr1:2955703-2955722 MsG0180000215.01.T01:intron 65.0%
CTTCGCCTTCGCGCAACACC+TGG + Chr1:2956531-2956550 None:intergenic 65.0%
GAGAGAGAGGGAGGGAGGGA+GGG + Chr1:2956410-2956429 None:intergenic 65.0%
GATTGGGGCTGGGATGAGGG+AGG - Chr1:2953383-2953402 MsG0180000215.01.T01:three_prime_UTR 65.0%
GGGCTGGGATGAGGGAGGTA+AGG - Chr1:2953388-2953407 MsG0180000215.01.T01:three_prime_UTR 65.0%
GTTCTCGGAGGGGAGAGGAG+TGG + Chr1:2957336-2957355 None:intergenic 65.0%
! CAGGTGTTGCGCGAAGGCGA+AGG - Chr1:2956529-2956548 MsG0180000215.01.T01:CDS 65.0%
AGAGAGGGAGGGAGGGAGGG+AGG + Chr1:2956407-2956426 None:intergenic 70.0%
CTCGGAGGGGAGAGGAGTGG+AGG + Chr1:2957333-2957352 None:intergenic 70.0%
GAGAGGGAGGGAGGGAGGGA+GGG + Chr1:2956406-2956425 None:intergenic 70.0%
GAGGGAGGGAGGGAGGGAGA+GGG + Chr1:2956400-2956419 None:intergenic 70.0%
! GAGCGGCGCCGAGAAGCTGA+TGG - Chr1:2954741-2954760 MsG0180000215.01.T01:intron 70.0%
GGAGGGAGGGAGGGAGGGAG+AGG + Chr1:2956401-2956420 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 2953377 2961351 2953377 ID=MsG0180000215.01;Name=MsG0180000215.01
Chr1 mRNA 2953377 2961351 2953377 ID=MsG0180000215.01.T01;Parent=MsG0180000215.01;Name=MsG0180000215.01.T01;_AED=0.30;_eAED=0.30;_QI=0|0.66|0.71|1|1|1|7|534|667
Chr1 exon 2961190 2961351 2961190 ID=MsG0180000215.01.T01:exon:6360;Parent=MsG0180000215.01.T01
Chr1 exon 2960887 2961024 2960887 ID=MsG0180000215.01.T01:exon:6361;Parent=MsG0180000215.01.T01
Chr1 exon 2956503 2957049 2956503 ID=MsG0180000215.01.T01:exon:6362;Parent=MsG0180000215.01.T01
Chr1 exon 2956152 2956327 2956152 ID=MsG0180000215.01.T01:exon:6363;Parent=MsG0180000215.01.T01
Chr1 exon 2954790 2955306 2954790 ID=MsG0180000215.01.T01:exon:6364;Parent=MsG0180000215.01.T01
Chr1 exon 2954298 2954467 2954298 ID=MsG0180000215.01.T01:exon:6365;Parent=MsG0180000215.01.T01
Chr1 exon 2953377 2954204 2953377 ID=MsG0180000215.01.T01:exon:6366;Parent=MsG0180000215.01.T01
Chr1 CDS 2961190 2961351 2961190 ID=MsG0180000215.01.T01:cds;Parent=MsG0180000215.01.T01
Chr1 CDS 2960887 2961024 2960887 ID=MsG0180000215.01.T01:cds;Parent=MsG0180000215.01.T01
Chr1 CDS 2956503 2957049 2956503 ID=MsG0180000215.01.T01:cds;Parent=MsG0180000215.01.T01
Chr1 CDS 2956152 2956327 2956152 ID=MsG0180000215.01.T01:cds;Parent=MsG0180000215.01.T01
Chr1 CDS 2954790 2955306 2954790 ID=MsG0180000215.01.T01:cds;Parent=MsG0180000215.01.T01
Chr1 CDS 2954298 2954467 2954298 ID=MsG0180000215.01.T01:cds;Parent=MsG0180000215.01.T01
Chr1 CDS 2953911 2954204 2953911 ID=MsG0180000215.01.T01:cds;Parent=MsG0180000215.01.T01
Chr1 three_prime_UTR 2953377 2953910 2953377 ID=MsG0180000215.01.T01:three_prime_utr;Parent=MsG0180000215.01.T01
Gene Sequence

>MsG0180000215.01.T01

ATGTTCGATTGGGGCTGGGATGAGGGAGGTAAGGCTTGGAAGTGGCATAGGAGGTTATGGACGTGGGAAGAAGACTATCGGCTGCTCACAGCTTCGACACCTTTCCATGTCCATGTACATGCAGCTGTTCTTTGGAGGAAGGATGTTCCTCTGATGGTCTCGCTTGTAAGGAACTGTCTTTGTGTTCATTCGGTGGATCCATCTCATATTGGGGATCATTTTCATCAGTTTGCTTCCTCTACAGGTTTTGCAAAATCTAGATGCTCTCTAATGCATTTGATTTGGTTTGCTAGTACTTGGAGAGTTCCAGATGGTTTTGTCCATCAAATGGAGGGCACGACATGCGGATTAGTTTCATTAACTGGTCCTAGTGGAAATACTTGGCAAGTTCGTTTAGTTGAGCAGGACAATCATCTGTTCTTTCATCATGGATGGTCAACATTTGTGGGAGATCATCATTTACAATATGGCGACCTTTTGGTTTTCAGATACGAGGGTCACTTGCATTTCACTGCGCAAGTATTTGGTGAAAATGCTTGCGAGAAAGAAGCTGCATTTCATTCTGAGTGCAATCTAAATTCATTCAACTTCGATGATATTGAAGGACAGAAAAGTGATGCTGAGGTGATTTCATCTTTGAATGTTGTTGGTGATGTTCAGAAGAAAATGAGGTGCGACGCCATTGAGAACCAGGAGCCTGAGTTGGCTATTGCTGGTAAAAACCTATCCAATTATGAGTTGGTTAGACCAATTAGTATGATCAGAGAAACAGAAGAAACCTGCAAAGAATGTTCAGCTAGTACTGTCCATGTTCCTTTTCAAACAGGAAATAGTAATGAAGTTGAAGATGCAGCAATCCTGTATAGAAGTGGGAAGGAAGATGACCACGATATTCTTAGCGGAGCTTCACTATCAAAGTTATCAGCACATGATGAGAAAAAGATAGCCCAATCATTTACGTCCTCTTTTCCATATTTTGTTAAAATAATCAAAACCTTCAATGTCAGTGGTTCATATACTCTGAATGTTCCATATCAATTTTCGATGTCACATTTTCCAAACTGCAAGACAAAGATTATTCTTTATAATTTGAAGGGAGAACACTGGACTGTTAATTCTGTTCCAACAACTAGAGTGCATACAAGTCACACTCTATGTGGAGGATGGATGGCTTTTGTTCGTGGCAATAGCATAAAAGTTGGAGATGTCTGCATTTTCGAACTTATACGTGAGTGTGAATTACGTGTTCGCATTGCTGAGGTTGGAAAAGATGGGTTAGACTGCCAGGTTGGAAAACTAGCTTGTAGCATGCTTAGTGAACGACATGATGTTGCTAGCCATAATACTTCCAGATATATGCCAAAGAAACCTAAAGTTAGCTCAAAGTGCAGAACGAAGGTTGATCTATTAGATAAAAAGTTGTCAAAGATTGGTCAAGAACCTGTTTTAGCCATTGAATTCAAGAAATCCGGTAGAGCTTCAACTACTTCGAAGAAGATGGGGCTTTCCCCCAAGTCAAAAGCTTCCCATAAAAAGACGGCTGTACCGAGGAAACATCGTGTTGAAGATGAACTAAGTTCCCAGGCTAAAGCTGGTTTGAGAATGTTGTTTGCACTCGACGAACAAAGAGTAGCTGAAGCTTTTACTTCCCCATTTCCTAATTTTGTGAAAATCATGAAGAAGTTCAATGTCAGTGGATCATACACTTTGAAAATCCCATATCAGTTCTCTGCTGCACATCTCCCCGCCTACAAAACAGAAGTTACGCTTCGCAATTCAAGAGGCCAGTGTTGGATTGTAAACTCTGTTCCAGATGCCAAAGGCAGAACAATTCACACCTTTTGTGGGGGATGGATAGCCTTTGTTCGTGATAATGACATCAATTTTGGTGATACTTGCATTTTCGAGCTCGTTTCTCATTATGTGATGCAGGTTCATATATCCGGGGTTGGAAAGGAAGGTCTTGACCATCAAATTGGGCATGTGAAACTTAATAACATGTAG
Protein sequence

>MsG0180000215.01.T01

MFDWGWDEGGKAWKWHRRLWTWEEDYRLLTASTPFHVHVHAAVLWRKDVPLMVSLVRNCLCVHSVDPSHIGDHFHQFASSTGFAKSRCSLMHLIWFASTWRVPDGFVHQMEGTTCGLVSLTGPSGNTWQVRLVEQDNHLFFHHGWSTFVGDHHLQYGDLLVFRYEGHLHFTAQVFGENACEKEAAFHSECNLNSFNFDDIEGQKSDAEVISSLNVVGDVQKKMRCDAIENQEPELAIAGKNLSNYELVRPISMIRETEETCKECSASTVHVPFQTGNSNEVEDAAILYRSGKEDDHDILSGASLSKLSAHDEKKIAQSFTSSFPYFVKIIKTFNVSGSYTLNVPYQFSMSHFPNCKTKIILYNLKGEHWTVNSVPTTRVHTSHTLCGGWMAFVRGNSIKVGDVCIFELIRECELRVRIAEVGKDGLDCQVGKLACSMLSERHDVASHNTSRYMPKKPKVSSKCRTKVDLLDKKLSKIGQEPVLAIEFKKSGRASTTSKKMGLSPKSKASHKKTAVPRKHRVEDELSSQAKAGLRMLFALDEQRVAEAFTSPFPNFVKIMKKFNVSGSYTLKIPYQFSAAHLPAYKTEVTLRNSRGQCWIVNSVPDAKGRTIHTFCGGWIAFVRDNDINFGDTCIFELVSHYVMQVHISGVGKEGLDHQIGHVKLNNM*