Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025766.01.T01 | XP_003613224.1 | 99.405 | 168 | 1 | 0 | 1 | 168 | 1 | 168 | 4.08E-118 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025766.01.T01 | G7K1C9 | 99.405 | 168 | 1 | 0 | 1 | 168 | 1 | 168 | 1.95e-118 | 341 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0580025766.01 | 0.812436 | 4.244256e-51 | 2.698620e-48 |
| MsG0080048701.01 | MsG0580025766.01 | 0.844474 | 7.392361e-59 | 1.194791e-55 |
| MsG0080048781.01 | MsG0580025766.01 | 0.827963 | 1.170202e-54 | 1.147196e-51 |
| MsG0080048842.01 | MsG0580025766.01 | -0.802101 | 6.580603e-49 | 3.195934e-46 |
| MsG0080048996.01 | MsG0580025766.01 | 0.825042 | 5.815436e-54 | 5.241588e-51 |
| MsG0080049140.01 | MsG0580025766.01 | 0.883464 | 4.387767e-71 | 2.784683e-67 |
| MsG0180000024.01 | MsG0580025766.01 | 0.811517 | 6.730403e-51 | 4.174967e-48 |
| MsG0180000111.01 | MsG0580025766.01 | 0.836897 | 7.148404e-57 | 9.134001e-54 |
| MsG0180000215.01 | MsG0580025766.01 | 0.803622 | 3.192792e-49 | 1.612064e-46 |
| MsG0180000360.01 | MsG0580025766.01 | 0.824138 | 9.496074e-54 | 8.339588e-51 |
| MsG0180000373.01 | MsG0580025766.01 | 0.807979 | 3.880103e-50 | 2.191842e-47 |
| MsG0180000983.01 | MsG0580025766.01 | 0.886852 | 2.383826e-72 | 1.731215e-68 |
| MsG0180002421.01 | MsG0580025766.01 | 0.858247 | 9.392973e-63 | 2.381834e-59 |
| MsG0180003427.01 | MsG0580025766.01 | 0.858169 | 9.907645e-63 | 2.505949e-59 |
| MsG0180003485.01 | MsG0580025766.01 | 0.841553 | 4.432425e-58 | 6.536267e-55 |
| MsG0180003656.01 | MsG0580025766.01 | 0.801317 | 9.533601e-49 | 4.539037e-46 |
| MsG0180003796.01 | MsG0580025766.01 | 0.822761 | 1.992963e-53 | 1.683604e-50 |
| MsG0180003994.01 | MsG0580025766.01 | 0.804068 | 2.578931e-49 | 1.317203e-46 |
| MsG0180004049.01 | MsG0580025766.01 | 0.807258 | 5.519010e-50 | 3.059677e-47 |
| MsG0180004099.01 | MsG0580025766.01 | 0.865729 | 4.779392e-65 | 1.571276e-61 |
| MsG0180004126.01 | MsG0580025766.01 | 0.802010 | 6.872947e-49 | 3.330096e-46 |
| MsG0180004661.01 | MsG0580025766.01 | 0.814447 | 1.533563e-51 | 1.029270e-48 |
| MsG0180004711.01 | MsG0580025766.01 | 0.822195 | 2.696705e-53 | 2.241467e-50 |
| MsG0180004754.01 | MsG0580025766.01 | 0.837592 | 4.747422e-57 | 6.196226e-54 |
| MsG0180004790.01 | MsG0580025766.01 | 0.805886 | 1.075159e-49 | 5.754080e-47 |
| MsG0180004806.01 | MsG0580025766.01 | 0.841458 | 4.695886e-58 | 6.904620e-55 |
| MsG0180004970.01 | MsG0580025766.01 | 0.825926 | 3.591424e-54 | 3.319500e-51 |
| MsG0180005002.01 | MsG0580025766.01 | 0.809982 | 1.445769e-50 | 8.611636e-48 |
| MsG0180005388.01 | MsG0580025766.01 | -0.806042 | 9.967975e-50 | 5.356018e-47 |
| MsG0180005835.01 | MsG0580025766.01 | 0.836672 | 8.157528e-57 | 1.035235e-53 |
| MsG0180006000.01 | MsG0580025766.01 | 0.841289 | 5.199450e-58 | 7.603760e-55 |
| MsG0280006311.01 | MsG0580025766.01 | 0.875491 | 2.955630e-68 | 1.382514e-64 |
| MsG0280010779.01 | MsG0580025766.01 | 0.862242 | 5.819510e-64 | 1.692758e-60 |
| MsG0280010795.01 | MsG0580025766.01 | 0.809658 | 1.697180e-50 | 1.002351e-47 |
| MsG0280010868.01 | MsG0580025766.01 | 0.843617 | 1.254813e-58 | 1.974600e-55 |
| MsG0280010907.01 | MsG0580025766.01 | 0.802798 | 4.727693e-49 | 2.337311e-46 |
| MsG0280010977.01 | MsG0580025766.01 | 0.804550 | 2.047426e-49 | 1.058669e-46 |
| MsG0280011014.01 | MsG0580025766.01 | 0.801048 | 1.082197e-48 | 5.117923e-46 |
| MsG0280011154.01 | MsG0580025766.01 | 0.838355 | 3.021688e-57 | 4.036832e-54 |
| MsG0280011282.01 | MsG0580025766.01 | 0.848148 | 7.370755e-60 | 1.339815e-56 |
| MsG0280011399.01 | MsG0580025766.01 | 0.801845 | 7.429754e-49 | 3.584999e-46 |
| MsG0380011640.01 | MsG0580025766.01 | 0.811864 | 5.656366e-51 | 3.540939e-48 |
| MsG0380012471.01 | MsG0580025766.01 | 0.840483 | 8.462323e-58 | 1.207050e-54 |
| MsG0380013636.01 | MsG0580025766.01 | 0.879568 | 1.120782e-69 | 6.106108e-66 |
| MsG0380014130.01 | MsG0580025766.01 | 0.805400 | 1.359747e-49 | 7.186702e-47 |
| MsG0380014132.01 | MsG0580025766.01 | 0.810931 | 9.018038e-51 | 5.508473e-48 |
| MsG0380014594.01 | MsG0580025766.01 | 0.820883 | 5.421615e-53 | 4.343309e-50 |
| MsG0380014754.01 | MsG0580025766.01 | 0.841159 | 5.626759e-58 | 8.195764e-55 |
| MsG0380014808.01 | MsG0580025766.01 | 0.802037 | 6.784944e-49 | 3.289771e-46 |
| MsG0480018507.01 | MsG0580025766.01 | 0.800813 | 1.208359e-48 | 5.680087e-46 |
| MsG0480018526.01 | MsG0580025766.01 | 0.823793 | 1.143928e-53 | 9.949818e-51 |
| MsG0480018918.01 | MsG0580025766.01 | 0.830480 | 2.868202e-55 | 3.025401e-52 |
| MsG0480018919.01 | MsG0580025766.01 | 0.851568 | 8.156354e-61 | 1.657747e-57 |
| MsG0480019276.01 | MsG0580025766.01 | 0.814594 | 1.422604e-51 | 9.586011e-49 |
| MsG0480019635.01 | MsG0580025766.01 | 0.880196 | 6.695560e-70 | 3.737714e-66 |
| MsG0480019699.01 | MsG0580025766.01 | 0.813330 | 2.703316e-51 | 1.760200e-48 |
| MsG0480019922.01 | MsG0580025766.01 | 0.835530 | 1.590712e-56 | 1.950464e-53 |
| MsG0480020263.01 | MsG0580025766.01 | 0.811857 | 5.676260e-51 | 3.552712e-48 |
| MsG0480020495.01 | MsG0580025766.01 | 0.816642 | 4.978831e-52 | 3.547536e-49 |
| MsG0480020847.01 | MsG0580025766.01 | 0.801233 | 9.919176e-49 | 4.712708e-46 |
| MsG0480020965.01 | MsG0580025766.01 | 0.813996 | 1.928780e-51 | 1.278752e-48 |
| MsG0480021013.01 | MsG0580025766.01 | 0.827878 | 1.226394e-54 | 1.199240e-51 |
| MsG0480021156.01 | MsG0580025766.01 | 0.834713 | 2.556541e-56 | 3.058509e-53 |
| MsG0480022167.01 | MsG0580025766.01 | 0.825160 | 5.452445e-54 | 4.931008e-51 |
| MsG0480022313.01 | MsG0580025766.01 | 0.848574 | 5.618817e-60 | 1.035674e-56 |
| MsG0480022325.01 | MsG0580025766.01 | 0.864113 | 1.535912e-64 | 4.767200e-61 |
| MsG0480022331.01 | MsG0580025766.01 | 0.862688 | 4.244880e-64 | 1.253976e-60 |
| MsG0480022620.01 | MsG0580025766.01 | 0.828601 | 8.212596e-55 | 8.201792e-52 |
| MsG0480022866.01 | MsG0580025766.01 | 0.817301 | 3.540901e-52 | 2.568931e-49 |
| MsG0480022998.01 | MsG0580025766.01 | 0.830362 | 3.064333e-55 | 3.221568e-52 |
| MsG0480023130.01 | MsG0580025766.01 | 0.838515 | 2.747556e-57 | 3.688705e-54 |
| MsG0480023262.01 | MsG0580025766.01 | 0.840743 | 7.234149e-58 | 1.040255e-54 |
| MsG0480023296.01 | MsG0580025766.01 | 0.813692 | 2.250825e-51 | 1.480039e-48 |
| MsG0480023620.01 | MsG0580025766.01 | 0.814187 | 1.750433e-51 | 1.166564e-48 |
| MsG0480023672.01 | MsG0580025766.01 | 0.837357 | 5.450698e-57 | 7.062318e-54 |
| MsG0480023762.01 | MsG0580025766.01 | 0.825058 | 5.763728e-54 | 5.197262e-51 |
| MsG0480023832.01 | MsG0580025766.01 | 0.832825 | 7.578934e-56 | 8.569227e-53 |
| MsG0580024109.01 | MsG0580025766.01 | 0.843283 | 1.540953e-58 | 2.399365e-55 |
| MsG0580024129.01 | MsG0580025766.01 | 0.812139 | 4.927143e-51 | 3.107628e-48 |
| MsG0580024388.01 | MsG0580025766.01 | 0.839023 | 2.029846e-57 | 2.767673e-54 |
| MsG0580024478.01 | MsG0580025766.01 | 0.841571 | 4.383102e-58 | 6.467320e-55 |
| MsG0580024489.01 | MsG0580025766.01 | 0.876626 | 1.202321e-68 | 5.869895e-65 |
| MsG0580024722.01 | MsG0580025766.01 | 0.820155 | 7.964414e-53 | 6.252876e-50 |
| MsG0580024758.01 | MsG0580025766.01 | 0.869372 | 3.253943e-66 | 1.218443e-62 |
| MsG0580024954.01 | MsG0580025766.01 | 0.832226 | 1.066457e-55 | 1.184503e-52 |
| MsG0580025093.01 | MsG0580025766.01 | 0.835375 | 1.740520e-56 | 2.124479e-53 |
| MsG0580025385.01 | MsG0580025766.01 | 0.817869 | 2.635997e-52 | 1.942484e-49 |
| MsG0580025515.01 | MsG0580025766.01 | 0.801747 | 7.781611e-49 | 3.745270e-46 |
| MsG0580025766.01 | MsG0580026059.01 | 0.850971 | 1.202334e-60 | 2.396769e-57 |
| MsG0580025766.01 | MsG0580026186.01 | 0.839349 | 1.671034e-57 | 2.301481e-54 |
| MsG0580025766.01 | MsG0580026307.01 | 0.825859 | 3.725515e-54 | 3.436995e-51 |
| MsG0580025766.01 | MsG0580026593.01 | 0.838842 | 2.260918e-57 | 3.065778e-54 |
| MsG0580025766.01 | MsG0580027431.01 | 0.818117 | 2.317334e-52 | 1.719311e-49 |
| MsG0580025766.01 | MsG0580028060.01 | 0.853541 | 2.231553e-61 | 4.838432e-58 |
| MsG0580025766.01 | MsG0580028330.01 | 0.815317 | 9.835348e-52 | 6.758487e-49 |
| MsG0580025766.01 | MsG0580028449.01 | 0.800198 | 1.613001e-48 | 7.464717e-46 |
| MsG0580025766.01 | MsG0580028756.01 | 0.855437 | 6.313541e-62 | 1.457599e-58 |
| MsG0580025766.01 | MsG0580029298.01 | 0.878055 | 3.825373e-69 | 1.968089e-65 |
| MsG0580025766.01 | MsG0580029496.01 | 0.813219 | 2.859240e-51 | 1.855994e-48 |
| MsG0580025766.01 | MsG0580029640.01 | 0.853782 | 1.902658e-61 | 4.158402e-58 |
| MsG0580025766.01 | MsG0580029712.01 | 0.838571 | 2.656808e-57 | 3.573018e-54 |
| MsG0580025766.01 | MsG0580029825.01 | 0.828750 | 7.555923e-55 | 7.578078e-52 |
| MsG0580025766.01 | MsG0680030763.01 | 0.814020 | 1.905092e-51 | 1.263921e-48 |
| MsG0580025766.01 | MsG0680031453.01 | 0.818311 | 2.094759e-52 | 1.562501e-49 |
| MsG0580025766.01 | MsG0680031616.01 | 0.820302 | 7.368341e-53 | 5.808301e-50 |
| MsG0580025766.01 | MsG0680034598.01 | 0.865731 | 4.773879e-65 | 1.569592e-61 |
| MsG0580025766.01 | MsG0780036752.01 | 0.860373 | 2.160940e-63 | 5.894019e-60 |
| MsG0580025766.01 | MsG0780036815.01 | 0.829954 | 3.855658e-55 | 4.005835e-52 |
| MsG0580025766.01 | MsG0780036816.01 | 0.806159 | 9.420427e-50 | 5.076988e-47 |
| MsG0580025766.01 | MsG0780037371.01 | 0.841373 | 4.941943e-58 | 7.246975e-55 |
| MsG0580025766.01 | MsG0780038373.01 | 0.827579 | 1.447388e-54 | 1.402904e-51 |
| MsG0580025766.01 | MsG0780038652.01 | 0.803227 | 3.854245e-49 | 1.926337e-46 |
| MsG0580025766.01 | MsG0780038707.01 | 0.807927 | 3.979365e-50 | 2.244769e-47 |
| MsG0580025766.01 | MsG0780038837.01 | 0.822052 | 2.911494e-53 | 2.410064e-50 |
| MsG0580025766.01 | MsG0780039137.01 | 0.853339 | 2.550350e-61 | 5.492456e-58 |
| MsG0580025766.01 | MsG0780039448.01 | 0.806485 | 8.039957e-50 | 4.369107e-47 |
| MsG0580025766.01 | MsG0780039462.01 | -0.828638 | 8.041630e-55 | 8.039696e-52 |
| MsG0580025766.01 | MsG0780039578.01 | 0.818081 | 2.361180e-52 | 1.750003e-49 |
| MsG0580025766.01 | MsG0780039861.01 | 0.821616 | 3.673701e-53 | 3.003512e-50 |
| MsG0580025766.01 | MsG0780039878.01 | 0.805111 | 1.563278e-49 | 8.201273e-47 |
| MsG0580025766.01 | MsG0780040307.01 | 0.836939 | 6.974912e-57 | 8.923523e-54 |
| MsG0580025766.01 | MsG0780040364.01 | 0.817888 | 2.610223e-52 | 1.924478e-49 |
| MsG0580025766.01 | MsG0780040482.01 | 0.828051 | 1.114188e-54 | 1.095087e-51 |
| MsG0580025766.01 | MsG0780040509.01 | 0.818343 | 2.060254e-52 | 1.538225e-49 |
| MsG0580025766.01 | MsG0780040533.01 | 0.813449 | 2.544746e-51 | 1.662459e-48 |
| MsG0580025766.01 | MsG0780040543.01 | 0.852251 | 5.218678e-61 | 1.083996e-57 |
| MsG0580025766.01 | MsG0780040896.01 | 0.885768 | 6.117809e-72 | 4.254178e-68 |
| MsG0580025766.01 | MsG0780041063.01 | 0.881888 | 1.650770e-70 | 9.841609e-67 |
| MsG0580025766.01 | MsG0780041132.01 | 0.831558 | 1.559717e-55 | 1.698719e-52 |
| MsG0580025766.01 | MsG0780041143.01 | 0.844763 | 6.180067e-59 | 1.008006e-55 |
| MsG0580025766.01 | MsG0780041756.01 | 0.803473 | 3.427754e-49 | 1.724081e-46 |
| MsG0580025766.01 | MsG0880041860.01 | 0.820546 | 6.477046e-53 | 5.140397e-50 |
| MsG0580025766.01 | MsG0880041896.01 | 0.848187 | 7.191767e-60 | 1.308970e-56 |
| MsG0580025766.01 | MsG0880042046.01 | 0.847724 | 9.650832e-60 | 1.731040e-56 |
| MsG0580025766.01 | MsG0880042552.01 | 0.830549 | 2.759419e-55 | 2.916479e-52 |
| MsG0580025766.01 | MsG0880042773.01 | 0.849310 | 3.510774e-60 | 6.628307e-57 |
| MsG0580025766.01 | MsG0880042779.01 | 0.805481 | 1.307418e-49 | 6.924592e-47 |
| MsG0580025766.01 | MsG0880042791.01 | 0.837276 | 5.717444e-57 | 7.389357e-54 |
| MsG0580025766.01 | MsG0880042906.01 | 0.838379 | 2.978940e-57 | 3.982704e-54 |
| MsG0580025766.01 | MsG0880042929.01 | 0.833828 | 4.261487e-56 | 4.965772e-53 |
| MsG0580025766.01 | MsG0880043516.01 | 0.847142 | 1.394466e-59 | 2.455446e-56 |
| MsG0580025766.01 | MsG0880043637.01 | 0.824928 | 6.187442e-54 | 5.558732e-51 |
| MsG0580025766.01 | MsG0880044041.01 | 0.832083 | 1.157369e-55 | 1.280082e-52 |
| MsG0580025766.01 | MsG0880044782.01 | 0.807349 | 5.278342e-50 | 2.933173e-47 |
| MsG0580025766.01 | MsG0880045295.01 | 0.824848 | 6.460960e-54 | 5.791204e-51 |
| MsG0580025766.01 | MsG0880045552.01 | 0.831162 | 1.951891e-55 | 2.100780e-52 |
| MsG0580025766.01 | MsG0880045890.01 | 0.834446 | 2.983324e-56 | 3.541412e-53 |
| MsG0580025766.01 | MsG0880045916.01 | 0.807457 | 5.008681e-50 | 2.791201e-47 |
| MsG0580025766.01 | MsG0880046446.01 | 0.806727 | 7.148253e-50 | 3.908673e-47 |
| MsG0580025766.01 | MsG0880046885.01 | 0.808702 | 2.720066e-50 | 1.565968e-47 |
| MsG0580025766.01 | MsG0880046922.01 | 0.842071 | 3.233446e-58 | 4.846376e-55 |
| MsG0580025766.01 | MsG0880047226.01 | 0.861740 | 8.293427e-64 | 2.370174e-60 |
| MsG0580025766.01 | MsG0880047431.01 | 0.850864 | 1.288725e-60 | 2.559781e-57 |
| MsG0580025766.01 | MsG0880047466.01 | 0.804357 | 2.245984e-49 | 1.155630e-46 |
| MsG0580025766.01 | MsG0880047666.01 | 0.853843 | 1.827564e-61 | 4.002669e-58 |
| MsG0380015190.01 | MsG0580025766.01 | 0.840476 | 8.497307e-58 | 1.211758e-54 |
| MsG0380015548.01 | MsG0580025766.01 | 0.883905 | 3.019454e-71 | 1.950947e-67 |
| MsG0380015736.01 | MsG0580025766.01 | 0.802037 | 6.785080e-49 | 3.289835e-46 |
| MsG0380015805.01 | MsG0580025766.01 | 0.853588 | 2.164367e-61 | 4.700360e-58 |
| MsG0380015816.01 | MsG0580025766.01 | 0.855137 | 7.719276e-62 | 1.764237e-58 |
| MsG0380016140.01 | MsG0580025766.01 | 0.807886 | 4.059154e-50 | 2.287359e-47 |
| MsG0380016703.01 | MsG0580025766.01 | 0.914572 | 1.638235e-84 | 4.098617e-80 |
| MsG0380016994.01 | MsG0580025766.01 | 0.847637 | 1.019805e-59 | 1.824199e-56 |
| MsG0380017159.01 | MsG0580025766.01 | 0.856904 | 2.346267e-62 | 5.687228e-59 |
| MsG0380017164.01 | MsG0580025766.01 | 0.841010 | 6.156473e-58 | 8.926001e-55 |
| MsG0380017239.01 | MsG0580025766.01 | 0.830942 | 2.210637e-55 | 2.363911e-52 |
| MsG0380017240.01 | MsG0580025766.01 | 0.831278 | 1.827297e-55 | 1.973490e-52 |
| MsG0380017361.01 | MsG0580025766.01 | 0.801335 | 9.449931e-49 | 4.501275e-46 |
| MsG0380017779.01 | MsG0580025766.01 | 0.800492 | 1.405274e-48 | 6.552274e-46 |
| MsG0380018029.01 | MsG0580025766.01 | 0.804266 | 2.346448e-49 | 1.204460e-46 |
| MsG0480018346.01 | MsG0580025766.01 | 0.825821 | 3.802158e-54 | 3.503761e-51 |
| MsG0480018397.01 | MsG0580025766.01 | 0.886560 | 3.074946e-72 | 2.207193e-68 |
| MsG0280006477.01 | MsG0580025766.01 | 0.815260 | 1.012498e-51 | 6.946378e-49 |
| MsG0280006540.01 | MsG0580025766.01 | 0.827559 | 1.463001e-54 | 1.417297e-51 |
| MsG0280006563.01 | MsG0580025766.01 | 0.805974 | 1.030221e-49 | 5.526087e-47 |
| MsG0280007359.01 | MsG0580025766.01 | 0.828334 | 9.526922e-55 | 9.440320e-52 |
| MsG0280007761.01 | MsG0580025766.01 | 0.829842 | 4.104504e-55 | 4.251463e-52 |
| MsG0280007983.01 | MsG0580025766.01 | 0.823149 | 1.618082e-53 | 1.381949e-50 |
| MsG0280008280.01 | MsG0580025766.01 | 0.878073 | 3.770391e-69 | 1.941269e-65 |
| MsG0280008679.01 | MsG0580025766.01 | 0.843343 | 1.485514e-58 | 2.317555e-55 |
| MsG0280008909.01 | MsG0580025766.01 | 0.805209 | 1.490936e-49 | 7.841599e-47 |
| MsG0280009234.01 | MsG0580025766.01 | 0.821864 | 3.218727e-53 | 2.650407e-50 |
| MsG0280009404.01 | MsG0580025766.01 | 0.820512 | 6.597691e-53 | 5.230825e-50 |
| MsG0280009493.01 | MsG0580025766.01 | 0.816766 | 4.669540e-52 | 3.338597e-49 |
| MsG0280009514.01 | MsG0580025766.01 | 0.834417 | 3.034480e-56 | 3.598921e-53 |
| MsG0280009752.01 | MsG0580025766.01 | 0.823599 | 1.269797e-53 | 1.098368e-50 |
| MsG0280010015.01 | MsG0580025766.01 | 0.802492 | 5.466947e-49 | 2.681622e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025766.01.T01 | MTR_5g034200 | 99.405 | 168 | 1 | 0 | 1 | 168 | 1 | 168 | 4.94e-122 | 341 |
| MsG0580025766.01.T01 | MTR_8g064760 | 38.608 | 158 | 73 | 6 | 20 | 167 | 18 | 161 | 5.59e-21 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025766.01.T01 | AT1G23530 | 33.690 | 187 | 89 | 8 | 11 | 167 | 7 | 188 | 3.01e-16 | 72.8 |
Find 34 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAAGTTGATATTGAATT+TGG | 0.135097 | 5:+23894251 | MsG0580025766.01.T01:CDS |
| AATTCAATATCAACTTCTTT+TGG | 0.244618 | 5:-23894248 | None:intergenic |
| CATTCATCAAATGGATCATT+TGG | 0.283971 | 5:+23894077 | MsG0580025766.01.T01:CDS |
| TCATGGTGCCCTTGAGCAAC+TGG | 0.365690 | 5:-23894395 | None:intergenic |
| CCTCCATGTCCATTATTCAT+AGG | 0.373664 | 5:-23894302 | None:intergenic |
| GCTTCTAAGCCTATGAATAA+TGG | 0.377824 | 5:+23894293 | MsG0580025766.01.T01:CDS |
| CTGTTGCTTGTTGTCTTGGA+AGG | 0.386601 | 5:+23894141 | MsG0580025766.01.T01:CDS |
| TCTGCTGTTGCTTGTTGTCT+TGG | 0.387132 | 5:+23894137 | MsG0580025766.01.T01:CDS |
| GATGAATGGTGGTCAGGTTC+AGG | 0.392297 | 5:-23894062 | None:intergenic |
| TTTCAAAACTCTTCATATCA+TGG | 0.397060 | 5:-23894412 | None:intergenic |
| TGTTGTTGTTGCTGCTGCAT+TGG | 0.419088 | 5:-23893990 | None:intergenic |
| ATTCATCAAATGGATCATTT+GGG | 0.438895 | 5:+23894078 | MsG0580025766.01.T01:CDS |
| AGTATAGGCCAGGTGCATAA+TGG | 0.443427 | 5:+23894459 | MsG0580025766.01.T01:CDS |
| CCTGACCACCATTCATCAAA+TGG | 0.451998 | 5:+23894068 | MsG0580025766.01.T01:CDS |
| CAGGTTCAGGTGGTGCATAC+TGG | 0.460578 | 5:-23894049 | None:intergenic |
| CCATTTGATGAATGGTGGTC+AGG | 0.470979 | 5:-23894068 | None:intergenic |
| GTGGTTGGATAAACTTGAAC+TGG | 0.498993 | 5:-23894017 | None:intergenic |
| AGCAGAAATTACTATTATGA+TGG | 0.518824 | 5:-23894120 | None:intergenic |
| GTCCTCCTCAAGGAAAGTAT+AGG | 0.536696 | 5:+23894444 | MsG0580025766.01.T01:CDS |
| CAAATGATCCATTTGATGAA+TGG | 0.542377 | 5:-23894076 | None:intergenic |
| GTACAGAAGCCAGTTGCTCA+AGG | 0.551041 | 5:+23894386 | MsG0580025766.01.T01:CDS |
| TACTGGTATGTGACAGTGGT+TGG | 0.552488 | 5:-23894032 | None:intergenic |
| GCTTAACAGGTTTCTGACTG+TGG | 0.553296 | 5:-23894193 | None:intergenic |
| ATAAAGCTTGGTCCTCCTCA+AGG | 0.553613 | 5:+23894434 | MsG0580025766.01.T01:CDS |
| TTGTAACTCCATTATGCACC+TGG | 0.558632 | 5:-23894467 | None:intergenic |
| CCTCAAGGAAAGTATAGGCC+AGG | 0.560026 | 5:+23894449 | MsG0580025766.01.T01:CDS |
| GGCCTATACTTTCCTTGAGG+AGG | 0.568497 | 5:-23894446 | None:intergenic |
| TACAGAAGCCAGTTGCTCAA+GGG | 0.581394 | 5:+23894387 | MsG0580025766.01.T01:CDS |
| CCTGGCCTATACTTTCCTTG+AGG | 0.589930 | 5:-23894449 | None:intergenic |
| GAATGGTGGTCAGGTTCAGG+TGG | 0.612964 | 5:-23894059 | None:intergenic |
| AAGCCTATGAATAATGGACA+TGG | 0.624027 | 5:+23894299 | MsG0580025766.01.T01:CDS |
| TGCATACTGGTATGTGACAG+TGG | 0.646713 | 5:-23894036 | None:intergenic |
| CCTATGAATAATGGACATGG+AGG | 0.659770 | 5:+23894302 | MsG0580025766.01.T01:CDS |
| ATGATCCATTTGATGAATGG+TGG | 0.679103 | 5:-23894073 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGAAGTTGATATTGAATT+TGG | + | Chr5:23894251-23894270 | MsG0580025766.01.T01:CDS | 20.0% |
| !!! | AATTCAATATCAACTTCTTT+TGG | - | Chr5:23894251-23894270 | None:intergenic | 20.0% |
| !!! | TTTTCAAAAAATAATGGACA+TGG | + | Chr5:23894326-23894345 | MsG0580025766.01.T01:CDS | 20.0% |
| ! | AGCAGAAATTACTATTATGA+TGG | - | Chr5:23894123-23894142 | None:intergenic | 25.0% |
| ! | ATTCATCAAATGGATCATTT+GGG | + | Chr5:23894078-23894097 | MsG0580025766.01.T01:CDS | 25.0% |
| ! | TTTCAAAACTCTTCATATCA+TGG | - | Chr5:23894415-23894434 | None:intergenic | 25.0% |
| !!! | AAGAGTTTTGAAATAAAGCT+TGG | + | Chr5:23894422-23894441 | MsG0580025766.01.T01:CDS | 25.0% |
| CAAATGATCCATTTGATGAA+TGG | - | Chr5:23894079-23894098 | None:intergenic | 30.0% | |
| CATTCATCAAATGGATCATT+TGG | + | Chr5:23894077-23894096 | MsG0580025766.01.T01:CDS | 30.0% | |
| ! | GGAGGCTTTTCAAAAAATAA+TGG | + | Chr5:23894320-23894339 | MsG0580025766.01.T01:CDS | 30.0% |
| !! | TCAAAAAATAATGGACATGG+AGG | + | Chr5:23894329-23894348 | MsG0580025766.01.T01:CDS | 30.0% |
| ATGATCCATTTGATGAATGG+TGG | - | Chr5:23894076-23894095 | None:intergenic | 35.0% | |
| GCTTCTAAGCCTATGAATAA+TGG | + | Chr5:23894293-23894312 | MsG0580025766.01.T01:CDS | 35.0% | |
| !! | AAGCCTATGAATAATGGACA+TGG | + | Chr5:23894299-23894318 | MsG0580025766.01.T01:CDS | 35.0% |
| CCTCCATGTCCATTATTCAT+AGG | - | Chr5:23894305-23894324 | None:intergenic | 40.0% | |
| GTGGTTGGATAAACTTGAAC+TGG | - | Chr5:23894020-23894039 | None:intergenic | 40.0% | |
| !! | CCTATGAATAATGGACATGG+AGG | + | Chr5:23894302-23894321 | MsG0580025766.01.T01:CDS | 40.0% |
| !!! | TGCTGCTTTTGATGCTTAAC+AGG | - | Chr5:23894209-23894228 | None:intergenic | 40.0% |
| ATAAAGCTTGGTCCTCCTCA+AGG | + | Chr5:23894434-23894453 | MsG0580025766.01.T01:CDS | 45.0% | |
| CCATTTGATGAATGGTGGTC+AGG | - | Chr5:23894071-23894090 | None:intergenic | 45.0% | |
| CCTGACCACCATTCATCAAA+TGG | + | Chr5:23894068-23894087 | MsG0580025766.01.T01:CDS | 45.0% | |
| GCTTAACAGGTTTCTGACTG+TGG | - | Chr5:23894196-23894215 | None:intergenic | 45.0% | |
| TACAGAAGCCAGTTGCTCAA+GGG | + | Chr5:23894387-23894406 | MsG0580025766.01.T01:CDS | 45.0% | |
| TACTGGTATGTGACAGTGGT+TGG | - | Chr5:23894035-23894054 | None:intergenic | 45.0% | |
| TGCATACTGGTATGTGACAG+TGG | - | Chr5:23894039-23894058 | None:intergenic | 45.0% | |
| ! | CTTCTTTTGGACGTGAGTGT+TGG | - | Chr5:23894238-23894257 | None:intergenic | 45.0% |
| ! | GTCCTCCTCAAGGAAAGTAT+AGG | + | Chr5:23894444-23894463 | MsG0580025766.01.T01:CDS | 45.0% |
| ! | TGTTGTTGTTGCTGCTGCAT+TGG | - | Chr5:23893993-23894012 | None:intergenic | 45.0% |
| !! | CTGTTGCTTGTTGTCTTGGA+AGG | + | Chr5:23894141-23894160 | MsG0580025766.01.T01:CDS | 45.0% |
| !! | TCTGCTGTTGCTTGTTGTCT+TGG | + | Chr5:23894137-23894156 | MsG0580025766.01.T01:CDS | 45.0% |
| CCTGGCCTATACTTTCCTTG+AGG | - | Chr5:23894452-23894471 | None:intergenic | 50.0% | |
| GATGAATGGTGGTCAGGTTC+AGG | - | Chr5:23894065-23894084 | None:intergenic | 50.0% | |
| GGCCTATACTTTCCTTGAGG+AGG | - | Chr5:23894449-23894468 | None:intergenic | 50.0% | |
| GTACAGAAGCCAGTTGCTCA+AGG | + | Chr5:23894386-23894405 | MsG0580025766.01.T01:CDS | 50.0% | |
| ! | CCTCAAGGAAAGTATAGGCC+AGG | + | Chr5:23894449-23894468 | MsG0580025766.01.T01:CDS | 50.0% |
| CAGGTTCAGGTGGTGCATAC+TGG | - | Chr5:23894052-23894071 | None:intergenic | 55.0% | |
| GAATGGTGGTCAGGTTCAGG+TGG | - | Chr5:23894062-23894081 | None:intergenic | 55.0% | |
| TCATGGTGCCCTTGAGCAAC+TGG | - | Chr5:23894398-23894417 | None:intergenic | 55.0% | |
| ! | TGTGGCTTTTGCCGTTGCCG+CGG | - | Chr5:23894178-23894197 | None:intergenic | 60.0% |
| ! | GGAAGGTTTTGCAGCCGCCG+CGG | + | Chr5:23894158-23894177 | MsG0580025766.01.T01:CDS | 65.0% |
| ! | TTTTGCAGCCGCCGCGGCAA+CGG | + | Chr5:23894164-23894183 | MsG0580025766.01.T01:CDS | 65.0% |
| ! | GGCTTTTGCCGTTGCCGCGG+CGG | - | Chr5:23894175-23894194 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 23893972 | 23894478 | 23893972 | ID=MsG0580025766.01;Name=MsG0580025766.01 |
| Chr5 | mRNA | 23893972 | 23894478 | 23893972 | ID=MsG0580025766.01.T01;Parent=MsG0580025766.01;Name=MsG0580025766.01.T01;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|168 |
| Chr5 | exon | 23893972 | 23894478 | 23893972 | ID=MsG0580025766.01.T01:exon:4575;Parent=MsG0580025766.01.T01 |
| Chr5 | CDS | 23893972 | 23894478 | 23893972 | ID=MsG0580025766.01.T01:cds;Parent=MsG0580025766.01.T01 |
| Gene Sequence |
| Protein sequence |
