AlfalfaGEDB | MsG0380016553.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016553.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016553.01.T01	AFK38624.1	96.939	98	2	1	30	126	69	166	2.43E-58	191

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016553.01.T01	I3SED2	96.939	98	2	1	30	126	69	166	1.16e-58	191

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047869.01	MsG0380016553.01	0.840457	8.597574e-58	1.225383e-54
MsG0080048271.01	MsG0380016553.01	0.806066	9.852687e-50	5.297337e-47
MsG0080048952.01	MsG0380016553.01	0.829425	5.185821e-55	5.305553e-52
MsG0080049014.01	MsG0380016553.01	0.826565	2.530207e-54	2.381390e-51
MsG0080049058.01	MsG0380016553.01	0.866355	3.030010e-65	1.018263e-61
MsG0180000065.01	MsG0380016553.01	0.829922	3.924029e-55	4.073328e-52
MsG0180000195.01	MsG0380016553.01	0.802413	5.675788e-49	2.778653e-46
MsG0180000215.01	MsG0380016553.01	0.800780	1.227550e-48	5.765371e-46
MsG0180000585.01	MsG0380016553.01	0.810676	1.024046e-50	6.212244e-48
MsG0180001006.01	MsG0380016553.01	0.847568	1.065176e-59	1.901184e-56
MsG0180001023.01	MsG0380016553.01	0.809103	2.232473e-50	1.299111e-47
MsG0180001117.01	MsG0380016553.01	0.806157	9.428412e-50	5.081058e-47
MsG0180001178.01	MsG0380016553.01	0.812310	4.520742e-51	2.864537e-48
MsG0180001471.01	MsG0380016553.01	0.801083	1.064177e-48	5.037109e-46
MsG0180001566.01	MsG0380016553.01	0.817696	2.884860e-52	2.115795e-49
MsG0180001930.01	MsG0380016553.01	0.806980	6.319620e-50	3.478282e-47
MsG0180002071.01	MsG0380016553.01	0.827078	1.908413e-54	1.823165e-51
MsG0180002335.01	MsG0380016553.01	0.805274	1.444461e-49	7.609702e-47
MsG0180002623.01	MsG0380016553.01	0.804940	1.697266e-49	8.865806e-47
MsG0180002952.01	MsG0380016553.01	0.808838	2.543522e-50	1.469564e-47
MsG0180003281.01	MsG0380016553.01	0.809939	1.476816e-50	8.786456e-48
MsG0180003337.01	MsG0380016553.01	0.834664	2.629167e-56	3.141017e-53
MsG0180003444.01	MsG0380016553.01	0.812566	3.974611e-51	2.535677e-48
MsG0180003669.01	MsG0380016553.01	0.836791	7.605089e-57	9.686824e-54
MsG0180003690.01	MsG0380016553.01	0.828428	9.038997e-55	8.982360e-52
MsG0180003864.01	MsG0380016553.01	0.827465	1.541219e-54	1.489140e-51
MsG0180003898.01	MsG0380016553.01	0.820074	8.310537e-53	6.510393e-50
MsG0180003948.01	MsG0380016553.01	0.825614	4.258974e-54	3.901519e-51
MsG0180004005.01	MsG0380016553.01	0.829490	4.999189e-55	5.124256e-52
MsG0180004099.01	MsG0380016553.01	0.807028	6.173208e-50	3.401953e-47
MsG0180004264.01	MsG0380016553.01	0.800569	1.355112e-48	6.330754e-46
MsG0180004295.01	MsG0380016553.01	0.814929	1.199498e-51	8.155366e-49
MsG0180004320.01	MsG0380016553.01	0.836356	9.815728e-57	1.234057e-53
MsG0180004357.01	MsG0380016553.01	0.832309	1.017494e-55	1.132756e-52
MsG0180004388.01	MsG0380016553.01	0.839493	1.533635e-57	2.121535e-54
MsG0180004389.01	MsG0380016553.01	0.825521	4.480590e-54	4.093480e-51
MsG0180004651.01	MsG0380016553.01	0.810943	8.964540e-51	5.477444e-48
MsG0180004711.01	MsG0380016553.01	0.817658	2.941082e-52	2.154847e-49
MsG0180004789.01	MsG0380016553.01	0.810363	1.196212e-50	7.196329e-48
MsG0180004970.01	MsG0380016553.01	0.850087	2.129516e-60	4.123947e-57
MsG0180005050.01	MsG0380016553.01	0.809042	2.300887e-50	1.336693e-47
MsG0180005250.01	MsG0380016553.01	0.811119	8.210239e-51	5.039562e-48
MsG0180005371.01	MsG0380016553.01	0.803143	4.011800e-49	2.000782e-46
MsG0180005388.01	MsG0380016553.01	-0.841495	4.591188e-58	6.758322e-55
MsG0180005393.01	MsG0380016553.01	0.807903	4.025710e-50	2.269440e-47
MsG0180005614.01	MsG0380016553.01	0.809034	2.310196e-50	1.341789e-47
MsG0180005842.01	MsG0380016553.01	0.833258	5.913988e-56	6.774069e-53
MsG0180005860.01	MsG0380016553.01	0.839120	1.915696e-57	2.619575e-54
MsG0180006235.01	MsG0380016553.01	0.825965	3.514754e-54	3.252270e-51
MsG0280006299.01	MsG0380016553.01	0.839831	1.252208e-57	1.750327e-54
MsG0280006311.01	MsG0380016553.01	0.805299	1.427621e-49	7.525862e-47
MsG0280006375.01	MsG0380016553.01	0.876033	1.925240e-68	9.192328e-65
MsG0280006407.01	MsG0380016553.01	0.803240	3.831944e-49	1.915812e-46
MsG0280006420.01	MsG0380016553.01	0.805864	1.086558e-49	5.811950e-47
MsG0280010554.01	MsG0380016553.01	0.801546	8.557632e-49	4.097858e-46
MsG0280010614.01	MsG0380016553.01	0.849894	2.411946e-60	4.641053e-57
MsG0280010698.01	MsG0380016553.01	0.837119	6.274275e-57	8.070248e-54
MsG0280010779.01	MsG0380016553.01	0.813044	3.123485e-51	2.018014e-48
MsG0280010824.01	MsG0380016553.01	0.881825	1.739632e-70	1.034481e-66
MsG0280011003.01	MsG0380016553.01	0.811122	8.196544e-51	5.031610e-48
MsG0280011013.01	MsG0380016553.01	0.807955	3.924825e-50	2.215759e-47
MsG0280011070.01	MsG0380016553.01	0.825058	5.764687e-54	5.198079e-51
MsG0280011086.01	MsG0380016553.01	0.815772	7.787362e-52	5.418875e-49
MsG0280011093.01	MsG0380016553.01	0.806018	1.008637e-49	5.416370e-47
MsG0280011282.01	MsG0380016553.01	0.860722	1.693938e-63	4.676052e-60
MsG0280011285.01	MsG0380016553.01	0.807770	4.297350e-50	2.414297e-47
MsG0280011286.01	MsG0380016553.01	0.821336	4.262539e-53	3.458038e-50
MsG0280011293.01	MsG0380016553.01	0.823319	1.476736e-53	1.267194e-50
MsG0280011446.01	MsG0380016553.01	0.813315	2.723675e-51	1.772732e-48
MsG0280011472.01	MsG0380016553.01	0.833889	4.114429e-56	4.803220e-53
MsG0380011494.01	MsG0380016553.01	0.808711	2.707936e-50	1.559311e-47
MsG0380011925.01	MsG0380016553.01	0.806493	8.008468e-50	4.352876e-47
MsG0380012146.01	MsG0380016553.01	0.815000	1.156846e-51	7.881035e-49
MsG0380012403.01	MsG0380016553.01	0.821380	4.164495e-53	3.382467e-50
MsG0380012460.01	MsG0380016553.01	0.800406	1.463288e-48	6.808010e-46
MsG0380012471.01	MsG0380016553.01	0.852075	5.855120e-61	1.209385e-57
MsG0380013363.01	MsG0380016553.01	0.812586	3.935216e-51	2.511883e-48
MsG0380013834.01	MsG0380016553.01	0.858089	1.046235e-62	2.639200e-59
MsG0380014365.01	MsG0380016553.01	0.800658	1.300091e-48	6.087466e-46
MsG0380014537.01	MsG0380016553.01	0.826255	2.999721e-54	2.798520e-51
MsG0380014573.01	MsG0380016553.01	0.843067	1.759744e-58	2.721011e-55
MsG0380014703.01	MsG0380016553.01	0.802738	4.866243e-49	2.402048e-46
MsG0380015168.01	MsG0380016553.01	0.811010	8.667916e-51	5.305922e-48
MsG0380015190.01	MsG0380016553.01	0.805575	1.249700e-49	6.634738e-47
MsG0380015548.01	MsG0380016553.01	0.800750	1.244749e-48	5.841850e-46
MsG0380015564.01	MsG0380016553.01	0.811439	6.998673e-51	4.332470e-48
MsG0380015566.01	MsG0380016553.01	0.824528	7.685704e-54	6.825614e-51
MsG0380015631.01	MsG0380016553.01	0.806697	7.252263e-50	3.962438e-47
MsG0380015677.01	MsG0380016553.01	0.857791	1.282648e-62	3.203027e-59
MsG0380015713.01	MsG0380016553.01	0.852678	3.944144e-61	8.305494e-58
MsG0380016348.01	MsG0380016553.01	0.831694	1.443327e-55	1.578303e-52
MsG0380016483.01	MsG0380016553.01	0.804195	2.427403e-49	1.243749e-46
MsG0380016553.01	MsG0380016765.01	0.842737	2.153615e-58	3.295652e-55
MsG0380016553.01	MsG0380016859.01	0.815041	1.132583e-51	7.724221e-49
MsG0380016553.01	MsG0380016994.01	0.830692	2.544497e-55	2.701036e-52
MsG0380016553.01	MsG0380017049.01	0.869136	3.880662e-66	1.440448e-62
MsG0380016553.01	MsG0380017140.01	0.801752	7.761974e-49	3.736258e-46
MsG0380016553.01	MsG0380018009.01	0.822403	2.413511e-53	2.018246e-50
MsG0380016553.01	MsG0480018163.01	0.817207	3.716053e-52	2.689154e-49
MsG0380016553.01	MsG0480018576.01	0.839502	1.524805e-57	2.109869e-54
MsG0380016553.01	MsG0480018637.01	0.801349	9.388692e-49	4.473697e-46
MsG0380016553.01	MsG0480018659.01	0.827792	1.286362e-54	1.254608e-51
MsG0380016553.01	MsG0480018660.01	0.821970	3.041072e-53	2.511507e-50
MsG0380016553.01	MsG0480018780.01	0.826523	2.588574e-54	2.433417e-51
MsG0380016553.01	MsG0480018919.01	0.802293	6.010522e-49	2.933453e-46
MsG0380016553.01	MsG0480018970.01	0.812076	5.086035e-51	3.202286e-48
MsG0380016553.01	MsG0480019297.01	0.809863	1.533007e-50	9.102677e-48
MsG0380016553.01	MsG0480019816.01	0.830173	3.408638e-55	3.563942e-52
MsG0380016553.01	MsG0480020090.01	0.835542	1.579472e-56	1.937368e-53
MsG0380016553.01	MsG0480020471.01	0.806504	7.964521e-50	4.330232e-47
MsG0380016553.01	MsG0480020674.01	0.830105	3.541478e-55	3.695376e-52
MsG0380016553.01	MsG0480020807.01	0.838822	2.288639e-57	3.101475e-54
MsG0380016553.01	MsG0480021274.01	0.807610	4.647311e-50	2.599977e-47
MsG0380016553.01	MsG0480021554.01	0.806540	7.828784e-50	4.260329e-47
MsG0380016553.01	MsG0480022213.01	-0.837623	4.661330e-57	6.090022e-54
MsG0380016553.01	MsG0480022301.01	0.811862	5.661892e-51	3.544198e-48
MsG0380016553.01	MsG0480022325.01	0.824236	9.003764e-54	7.929165e-51
MsG0380016553.01	MsG0480022480.01	0.844491	7.314911e-59	1.182968e-55
MsG0380016553.01	MsG0480022551.01	0.870966	9.782957e-67	3.878877e-63
MsG0380016553.01	MsG0480022971.01	0.845718	3.410598e-59	5.735847e-56
MsG0380016553.01	MsG0480023130.01	0.833921	4.038981e-56	4.719907e-53
MsG0380016553.01	MsG0480023410.01	0.848282	6.768920e-60	1.235992e-56
MsG0380016553.01	MsG0480023600.01	0.820614	6.249509e-53	4.968788e-50
MsG0380016553.01	MsG0480023707.01	0.870523	1.368773e-66	5.340660e-63
MsG0380016553.01	MsG0480023832.01	0.898642	4.344899e-77	5.180165e-73
MsG0380016553.01	MsG0480023835.01	0.816567	5.174593e-52	3.679547e-49
MsG0380016553.01	MsG0480023873.01	0.858913	5.941588e-63	1.541136e-59
MsG0380016553.01	MsG0580024035.01	0.843902	1.053166e-58	1.672134e-55
MsG0380016553.01	MsG0580024073.01	0.811843	5.716519e-51	3.576592e-48
MsG0380016553.01	MsG0580024082.01	0.825304	5.043062e-54	4.579197e-51
MsG0380016553.01	MsG0580024129.01	0.813113	3.016765e-51	1.952554e-48
MsG0380016553.01	MsG0580024393.01	0.832302	1.021378e-55	1.136867e-52
MsG0380016553.01	MsG0580024478.01	0.806853	6.721490e-50	3.687414e-47
MsG0380016553.01	MsG0580024489.01	0.803644	3.158702e-49	1.595748e-46
MsG0380016553.01	MsG0580024563.01	0.852777	3.695855e-61	7.808315e-58
MsG0380016553.01	MsG0580024618.01	0.826044	3.366543e-54	3.121978e-51
MsG0380016553.01	MsG0580024781.01	0.803522	3.349303e-49	1.686815e-46
MsG0380016553.01	MsG0580024825.01	0.813459	2.532770e-51	1.655068e-48
MsG0380016553.01	MsG0580024887.01	0.817656	2.944322e-52	2.157088e-49
MsG0380016553.01	MsG0580025184.01	0.815697	8.095400e-52	5.621160e-49
MsG0380016553.01	MsG0580025321.01	0.841128	5.734010e-58	8.343759e-55
MsG0380016553.01	MsG0580025556.01	0.801657	8.118468e-49	3.898503e-46
MsG0380016553.01	MsG0580025758.01	0.817314	3.516675e-52	2.552268e-49
MsG0380016553.01	MsG0580025807.01	0.806182	9.315791e-50	5.023623e-47
MsG0380016553.01	MsG0580026023.01	0.823670	1.222227e-53	1.059408e-50
MsG0380016553.01	MsG0580026070.01	0.828550	8.445263e-55	8.421917e-52
MsG0380016553.01	MsG0580026212.01	0.807232	5.588140e-50	3.095912e-47
MsG0380016553.01	MsG0580027031.01	0.814169	1.766267e-51	1.176525e-48
MsG0380016553.01	MsG0580027049.01	0.831447	1.660938e-55	1.802953e-52
MsG0380016553.01	MsG0580027091.01	0.807154	5.806160e-50	3.210123e-47
MsG0380016553.01	MsG0580027208.01	0.855337	6.750230e-62	1.553379e-58
MsG0380016553.01	MsG0580027431.01	0.807152	5.811997e-50	3.213160e-47
MsG0380016553.01	MsG0580027745.01	0.820120	8.110331e-53	6.361888e-50
MsG0380016553.01	MsG0580028307.01	0.813648	2.301592e-51	1.511619e-48
MsG0380016553.01	MsG0580028394.01	0.810115	1.353348e-50	8.089167e-48
MsG0380016553.01	MsG0580028990.01	0.802713	4.924474e-49	2.429229e-46
MsG0380016553.01	MsG0580029189.01	0.846146	2.609232e-59	4.448336e-56
MsG0380016553.01	MsG0580029278.01	0.806218	9.150393e-50	4.939058e-47
MsG0380016553.01	MsG0580029541.01	0.801834	7.467253e-49	3.602019e-46
MsG0380016553.01	MsG0580029640.01	0.821542	3.820393e-53	3.117171e-50
MsG0380016553.01	MsG0580029960.01	0.833582	4.909844e-56	5.678591e-53
MsG0380016553.01	MsG0580030235.01	0.806504	7.964521e-50	4.330232e-47
MsG0380016553.01	MsG0680030316.01	0.814205	1.734317e-51	1.156353e-48
MsG0380016553.01	MsG0680030633.01	0.862052	6.656453e-64	1.923195e-60
MsG0380016553.01	MsG0680030672.01	0.815105	1.096264e-51	7.489073e-49
MsG0380016553.01	MsG0680031262.01	0.814076	1.851968e-51	1.230529e-48
MsG0380016553.01	MsG0680031549.01	0.801199	1.007945e-48	4.784640e-46
MsG0380016553.01	MsG0680031651.01	0.821636	3.633114e-53	2.972177e-50
MsG0380016553.01	MsG0680033623.01	0.812596	3.914557e-51	2.499346e-48
MsG0380016553.01	MsG0680034192.01	0.849502	3.103109e-60	5.894687e-57
MsG0380016553.01	MsG0680034598.01	0.854657	1.063575e-61	2.392652e-58
MsG0380016553.01	MsG0680035475.01	0.815248	1.019023e-51	6.988586e-49
MsG0380016553.01	MsG0680035573.01	0.855414	6.413160e-62	1.479548e-58
MsG0380016553.01	MsG0680035692.01	0.816671	4.903135e-52	3.496521e-49
MsG0380016553.01	MsG0680035764.01	0.800181	1.625936e-48	7.521345e-46
MsG0380016553.01	MsG0680035909.01	0.830809	2.382030e-55	2.537294e-52
MsG0380016553.01	MsG0780036477.01	0.814070	1.858000e-51	1.234336e-48
MsG0380016553.01	MsG0780036663.01	0.843776	1.138240e-58	1.799743e-55
MsG0380016553.01	MsG0780036719.01	0.814597	1.420746e-51	9.574178e-49
MsG0380016553.01	MsG0780036752.01	0.803913	2.778134e-49	1.413330e-46
MsG0380016553.01	MsG0780036852.01	0.858080	1.052656e-62	2.654620e-59
MsG0380016553.01	MsG0780036950.01	0.804823	1.794975e-49	9.348105e-47
MsG0380016553.01	MsG0780037918.01	0.801020	1.096203e-48	5.180573e-46
MsG0380016553.01	MsG0780037919.01	0.816343	5.806524e-52	4.104007e-49
MsG0380016553.01	MsG0780038391.01	0.804378	2.222739e-49	1.144306e-46
MsG0380016553.01	MsG0780038401.01	0.828777	7.446433e-55	7.474200e-52
MsG0380016553.01	MsG0780038424.01	0.809670	1.686947e-50	9.966298e-48
MsG0380016553.01	MsG0780038495.01	0.849144	3.904777e-60	7.333950e-57
MsG0380016553.01	MsG0780038602.01	0.803296	3.730887e-49	1.867949e-46
MsG0380016553.01	MsG0780038802.01	0.800324	1.520294e-48	7.058722e-46
MsG0380016553.01	MsG0780038803.01	0.815163	1.064332e-51	7.282445e-49
MsG0380016553.01	MsG0780039059.01	0.829277	5.631883e-55	5.738008e-52
MsG0380016553.01	MsG0780039137.01	0.845092	5.037647e-59	8.302921e-56
MsG0380016553.01	MsG0780039252.01	0.836988	6.777123e-57	8.683337e-54
MsG0380016553.01	MsG0780039389.01	0.828487	8.749395e-55	8.709162e-52
MsG0380016553.01	MsG0780040030.01	0.826569	2.524088e-54	2.375937e-51
MsG0380016553.01	MsG0780040044.01	0.810913	9.097848e-51	5.554414e-48
MsG0380016553.01	MsG0780040216.01	0.824881	6.348916e-54	5.696272e-51
MsG0380016553.01	MsG0780040261.01	0.813838	2.090075e-51	1.379760e-48
MsG0380016553.01	MsG0780040442.01	0.829480	5.029236e-55	5.153400e-52
MsG0380016553.01	MsG0780040488.01	0.844969	5.439259e-59	8.929798e-56
MsG0380016553.01	MsG0780040604.01	0.827949	1.179348e-54	1.155650e-51
MsG0380016553.01	MsG0780040632.01	0.825853	3.737380e-54	3.447370e-51
MsG0380016553.01	MsG0780040669.01	0.808744	2.663808e-50	1.535294e-47
MsG0380016553.01	MsG0780040723.01	0.854874	9.200004e-62	2.084604e-58
MsG0380016553.01	MsG0780040841.01	0.812864	3.420948e-51	2.199492e-48
MsG0380016553.01	MsG0780040896.01	0.828234	1.007046e-54	9.949965e-52
MsG0380016553.01	MsG0780041207.01	0.800249	1.574468e-48	7.296148e-46
MsG0380016553.01	MsG0780041456.01	0.827591	1.437583e-54	1.393885e-51
MsG0380016553.01	MsG0780041535.01	0.820406	6.976247e-53	5.515267e-50
MsG0380016553.01	MsG0780041667.01	0.822793	1.958725e-53	1.656076e-50
MsG0380016553.01	MsG0880041860.01	0.872403	3.267961e-67	1.365808e-63
MsG0380016553.01	MsG0880041883.01	0.842332	2.757866e-58	4.167866e-55
MsG0380016553.01	MsG0880041986.01	0.802521	5.393138e-49	2.647305e-46
MsG0380016553.01	MsG0880042212.01	0.805817	1.111546e-49	5.938350e-47
MsG0380016553.01	MsG0880042543.01	0.883686	3.638123e-71	2.330528e-67
MsG0380016553.01	MsG0880042698.01	0.836929	7.013043e-57	8.969640e-54
MsG0380016553.01	MsG0880043262.01	0.817299	3.544331e-52	2.571272e-49
MsG0380016553.01	MsG0880043299.01	0.844388	7.798135e-59	1.256872e-55
MsG0380016553.01	MsG0880043491.01	0.811478	6.861128e-51	4.251743e-48
MsG0380016553.01	MsG0880043921.01	0.819652	1.038144e-52	8.036543e-50
MsG0380016553.01	MsG0880044237.01	0.809506	1.829175e-50	1.075913e-47
MsG0380016553.01	MsG0880044510.01	0.809792	1.588562e-50	9.415127e-48
MsG0380016553.01	MsG0880044782.01	0.810502	1.116687e-50	6.742564e-48
MsG0380016553.01	MsG0880044917.01	0.810150	1.330033e-50	7.956719e-48
MsG0380016553.01	MsG0880045118.01	0.836377	9.696948e-57	1.219841e-53
MsG0380016553.01	MsG0880045257.01	0.820967	5.184969e-53	4.163734e-50
MsG0380016553.01	MsG0880045429.01	0.826384	2.794122e-54	2.616485e-51
MsG0380016553.01	MsG0880045736.01	0.822478	2.318646e-53	1.942966e-50
MsG0380016553.01	MsG0880045937.01	0.827895	1.215275e-54	1.188936e-51
MsG0380016553.01	MsG0880046012.01	0.869507	2.940227e-66	1.106444e-62
MsG0380016553.01	MsG0880046020.01	0.859431	4.156034e-63	1.097391e-59
MsG0380016553.01	MsG0880046132.01	0.826186	3.114091e-54	2.899628e-51
MsG0380016553.01	MsG0880046479.01	0.841838	3.727148e-58	5.545296e-55
MsG0380016553.01	MsG0880046615.01	0.839894	1.205780e-57	1.688711e-54
MsG0380016553.01	MsG0880046669.01	0.863762	1.975237e-64	6.057637e-61
MsG0380016553.01	MsG0880046753.01	0.812492	4.126692e-51	2.627615e-48
MsG0380016553.01	MsG0880046788.01	0.822175	2.726208e-53	2.264656e-50
MsG0380016553.01	MsG0880047012.01	0.836159	1.101631e-56	1.376768e-53
MsG0380016553.01	MsG0880047120.01	0.839207	1.819513e-57	2.494957e-54
MsG0380016553.01	MsG0880047191.01	0.814247	1.698235e-51	1.133620e-48
MsG0380016553.01	MsG0880047431.01	0.800713	1.266666e-48	5.938955e-46
MsG0280006591.01	MsG0380016553.01	0.827280	1.706755e-54	1.640224e-51
MsG0280006749.01	MsG0380016553.01	0.825367	4.871251e-54	4.431024e-51
MsG0280007071.01	MsG0380016553.01	0.811091	8.326411e-51	5.107204e-48
MsG0280007088.01	MsG0380016553.01	0.807029	6.172041e-50	3.401374e-47
MsG0280007089.01	MsG0380016553.01	0.845087	5.053122e-59	8.327034e-56
MsG0280007529.01	MsG0380016553.01	0.802055	6.726799e-49	3.263161e-46
MsG0280007564.01	MsG0380016553.01	0.854412	1.252508e-61	2.794703e-58
MsG0280007609.01	MsG0380016553.01	0.842836	2.027556e-58	3.112477e-55
MsG0280008130.01	MsG0380016553.01	0.807264	5.502278e-50	3.050948e-47
MsG0280008280.01	MsG0380016553.01	0.886992	2.110312e-72	1.541422e-68
MsG0280008284.01	MsG0380016553.01	0.829985	3.788654e-55	3.939882e-52
MsG0280008349.01	MsG0380016553.01	0.801894	7.258029e-49	3.506585e-46
MsG0280008384.01	MsG0380016553.01	0.804537	2.059667e-49	1.064648e-46
MsG0280008590.01	MsG0380016553.01	0.829686	4.479797e-55	4.618724e-52
MsG0280008615.01	MsG0380016553.01	0.814606	1.414018e-51	9.531181e-49
MsG0280008763.01	MsG0380016553.01	0.823449	1.376669e-53	1.185687e-50
MsG0280008856.01	MsG0380016553.01	0.800306	1.533188e-48	7.115388e-46
MsG0280009448.01	MsG0380016553.01	0.800211	1.603069e-48	7.421357e-46
MsG0280009493.01	MsG0380016553.01	0.868895	4.645577e-66	1.708821e-62
MsG0280009514.01	MsG0380016553.01	0.880226	6.535162e-70	3.651983e-66
MsG0280009596.01	MsG0380016553.01	0.803526	3.342134e-49	1.683415e-46
MsG0280009748.01	MsG0380016553.01	0.851626	7.853118e-61	1.599070e-57
MsG0280009835.01	MsG0380016553.01	0.882703	8.336199e-71	5.129596e-67
MsG0280010389.01	MsG0380016553.01	0.871763	5.333512e-67	2.176901e-63
MsG0280010443.01	MsG0380016553.01	0.800456	1.428952e-48	6.656558e-46
MsG0280010447.01	MsG0380016553.01	0.815447	9.199871e-52	6.344615e-49
MsG0280010459.01	MsG0380016553.01	0.821121	4.779021e-53	3.853913e-50
MsG0280010491.01	MsG0380016553.01	0.826832	2.185360e-54	2.072651e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016553.01.T01	MTR_3g091820	96.939	98	2	1	30	126	128	225	8.78e-62	191

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 23 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTGTCCTTGATGGATCTT+AGG	0.169048	3:-85074380	None:intergenic
GGTTAAGATCTTGTCCTTGA+TGG	0.347085	3:-85074388	None:intergenic
CTTGTCCTTGATGGATCTTA+GGG	0.390118	3:-85074379	None:intergenic
TGAAAACTGCTTCTTCATCA+AGG	0.432756	3:+85074519	MsG0380016553.01.T01:CDS
AAGCTCAATGAATTTAGATA+TGG	0.438747	3:-85074450	None:intergenic
TTGTCTTGATCAGTTGTGTA+AGG	0.463233	3:-85074473	None:intergenic
CTCTCTAACATAGAAGGTGT+TGG	0.476502	3:-85074039	None:intergenic
AATTTAGGGGAATATTGGAT+TGG	0.478716	3:+85073982	MsG0380016553.01.T01:intron
CTAGACTCAGACAAAGTCAT+AGG	0.485051	3:-85074560	None:intergenic
GAAAACTGCTTCTTCATCAA+GGG	0.488666	3:+85074520	MsG0380016553.01.T01:CDS
TAATTATCCTCAGTTGTTTG+TGG	0.490761	3:-85074422	None:intergenic
TTGTTTGTGGTGGATAAGCT+AGG	0.500159	3:-85074409	None:intergenic
TGGATTGGTTAAACAATGGA+TGG	0.507956	3:+85073997	MsG0380016553.01.T01:CDS
TTATCCTCAGTTGTTTGTGG+TGG	0.529976	3:-85074419	None:intergenic
AGACAAAACTACAAGTGCTA+TGG	0.533697	3:+85074490	MsG0380016553.01.T01:CDS
ATCTATGGACACAGCTCAGT+GGG	0.545119	3:+85073546	MsG0380016553.01.T01:exon
ATATTGGATTGGTTAAACAA+TGG	0.558827	3:+85073993	MsG0380016553.01.T01:CDS
AAAACTGCTTCTTCATCAAG+GGG	0.565168	3:+85074521	MsG0380016553.01.T01:CDS
AGTGCAATGTATAATTCAAG+TGG	0.566445	3:+85074581	MsG0380016553.01.T01:CDS
CAAAACCCTAAGATCCATCA+AGG	0.571674	3:+85074374	MsG0380016553.01.T01:CDS
GGACACAGCTCAGTGGGCAC+AGG	0.600044	3:+85073552	MsG0380016553.01.T01:CDS
AATCTATGGACACAGCTCAG+TGG	0.676107	3:+85073545	MsG0380016553.01.T01:exon
TTATCCACCACAAACAACTG+AGG	0.701982	3:+85074415	MsG0380016553.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGTATATAAGAAATAATAA+AGG	-	Chr3:85073942-85073961	None:intergenic	10.0%
!!!	ATTATTTTTGAAAAATTTAG+GGG	+	Chr3:85073969-85073988	MsG0380016553.01.T01:intron	10.0%
!!	AGAAGAAAAAATAAATGAAA+AGG	-	Chr3:85073802-85073821	None:intergenic	15.0%
!!	ATGATACATAAACTTTATTA+TGG	-	Chr3:85073663-85073682	None:intergenic	15.0%
!!!	ATATTTTTTGTTATTGATGA+TGG	-	Chr3:85074300-85074319	None:intergenic	15.0%
!!	CATAGATTTAAGAAGAAAAA+TGG	-	Chr3:85073533-85073552	None:intergenic	20.0%
!!	TAAGAAGAAAAATGGAAAAA+AGG	-	Chr3:85073525-85073544	None:intergenic	20.0%
!!!	AAAACTGAAATTTTTAGTTG+AGG	-	Chr3:85073753-85073772	None:intergenic	20.0%
!!!	CATTTTTCTTCTTAAATCTA+TGG	+	Chr3:85073531-85073550	MsG0380016553.01.T01:exon	20.0%
!!!	TTTTCTTCATGATTATAAGA+AGG	-	Chr3:85073607-85073626	None:intergenic	20.0%
!	AAGCTCAATGAATTTAGATA+TGG	-	Chr3:85074453-85074472	None:intergenic	25.0%
!	AATAAAGGAAACAAACAAGA+AGG	-	Chr3:85073927-85073946	None:intergenic	25.0%
!	GAAAAATGGAAAAAAGGAAA+AGG	-	Chr3:85073519-85073538	None:intergenic	25.0%
!	TCTAGAAACTAGAAAAAAGT+GGG	+	Chr3:85073463-85073482	MsG0380016553.01.T01:five_prime_UTR	25.0%
!	TGAAAAATTTAGGGGAATAT+TGG	+	Chr3:85073977-85073996	MsG0380016553.01.T01:intron	25.0%
!!	TTTTAAGCTTGGGTTAATTT+TGG	+	Chr3:85074619-85074638	MsG0380016553.01.T01:CDS	25.0%
!!!	ACAATTCATCAACTTTTTCT+TGG	-	Chr3:85073859-85073878	None:intergenic	25.0%
!!!	ATATTGGATTGGTTAAACAA+TGG	+	Chr3:85073993-85074012	MsG0380016553.01.T01:CDS	25.0%
!!!	CAATTCATCAACTTTTTCTT+GGG	-	Chr3:85073858-85073877	None:intergenic	25.0%
!!!	GTTGATTATTGTTAGTTCTA+AGG	+	Chr3:85073690-85073709	MsG0380016553.01.T01:intron	25.0%
!!!	TTTAAAGCTTGATCTTTTTG+TGG	-	Chr3:85074075-85074094	None:intergenic	25.0%
!!!	TTTTTTGTTATTGATGATGG+AGG	-	Chr3:85074297-85074316	None:intergenic	25.0%
	AATTTAGGGGAATATTGGAT+TGG	+	Chr3:85073982-85074001	MsG0380016553.01.T01:intron	30.0%
	AGTGCAATGTATAATTCAAG+TGG	+	Chr3:85074581-85074600	MsG0380016553.01.T01:CDS	30.0%
	GAAGGAAAGAAAACAGAAAA+AGG	-	Chr3:85073589-85073608	None:intergenic	30.0%
	TAATTATCCTCAGTTGTTTG+TGG	-	Chr3:85074425-85074444	None:intergenic	30.0%
!	ACTTTTGCAAAACTTGTAGA+AGG	+	Chr3:85074166-85074185	MsG0380016553.01.T01:intron	30.0%
!	CTCTAGAAACTAGAAAAAAG+TGG	+	Chr3:85073462-85073481	MsG0380016553.01.T01:five_prime_UTR	30.0%
!	CTTTGCAAGATTTTAAGCTT+GGG	+	Chr3:85074609-85074628	MsG0380016553.01.T01:CDS	30.0%
!	CTTTTTCTTGGGAAAAAGAA+AGG	-	Chr3:85073847-85073866	None:intergenic	30.0%
!	TCTTTAAGAAATGTTCCTGT+AGG	+	Chr3:85074207-85074226	MsG0380016553.01.T01:intron	30.0%
!!!	CACTTTTTTCTAGTTTCTAG+AGG	-	Chr3:85073464-85073483	None:intergenic	30.0%
!!!	GAAATTTTTAGTTGAGGATC+AGG	-	Chr3:85073747-85073766	None:intergenic	30.0%
	AAAACTGCTTCTTCATCAAG+GGG	+	Chr3:85074521-85074540	MsG0380016553.01.T01:CDS	35.0%
	AGACAAAACTACAAGTGCTA+TGG	+	Chr3:85074490-85074509	MsG0380016553.01.T01:CDS	35.0%
	AGGATCAGGAAAAGTAGTAA+AGG	-	Chr3:85073733-85073752	None:intergenic	35.0%
	CTATGTTAGAGAGAAAAGCA+AGG	+	Chr3:85074049-85074068	MsG0380016553.01.T01:intron	35.0%
	GAAAACTGCTTCTTCATCAA+GGG	+	Chr3:85074520-85074539	MsG0380016553.01.T01:CDS	35.0%
	TGAAAACTGCTTCTTCATCA+AGG	+	Chr3:85074519-85074538	MsG0380016553.01.T01:CDS	35.0%
	TTAAGAAATGTTCCTGTAGG+TGG	+	Chr3:85074210-85074229	MsG0380016553.01.T01:intron	35.0%
	TTGTCTTGATCAGTTGTGTA+AGG	-	Chr3:85074476-85074495	None:intergenic	35.0%
!	GCAAAACTTGTAGAAGGTAT+TGG	+	Chr3:85074172-85074191	MsG0380016553.01.T01:intron	35.0%
!	GCTTTGCAAGATTTTAAGCT+TGG	+	Chr3:85074608-85074627	MsG0380016553.01.T01:CDS	35.0%
!	GCTTTTCTCTCTAACATAGA+AGG	-	Chr3:85074048-85074067	None:intergenic	35.0%
!!	ATCAAGCTTTAAACTGTCCA+AGG	+	Chr3:85074082-85074101	MsG0380016553.01.T01:intron	35.0%
!!	TGGATTGGTTAAACAATGGA+TGG	+	Chr3:85073997-85074016	MsG0380016553.01.T01:CDS	35.0%
!!!	CAAGTTTTGCAAAAGTACCT+TGG	-	Chr3:85074162-85074181	None:intergenic	35.0%
	CAAAACCCTAAGATCCATCA+AGG	+	Chr3:85074374-85074393	MsG0380016553.01.T01:CDS	40.0%
	CTAGACTCAGACAAAGTCAT+AGG	-	Chr3:85074563-85074582	None:intergenic	40.0%
	GGTTAAGATCTTGTCCTTGA+TGG	-	Chr3:85074391-85074410	None:intergenic	40.0%
	GGTTGTGATTGTGAGATTGA+AGG	-	Chr3:85074276-85074295	None:intergenic	40.0%
	GTGTTAGTTGAATTGCACCT+TGG	-	Chr3:85074102-85074121	None:intergenic	40.0%
	TCTTGGGAAAAAGAAAGGTG+TGG	-	Chr3:85073842-85073861	None:intergenic	40.0%
	TTATCCACCACAAACAACTG+AGG	+	Chr3:85074415-85074434	MsG0380016553.01.T01:CDS	40.0%
	TTATCCTCAGTTGTTTGTGG+TGG	-	Chr3:85074422-85074441	None:intergenic	40.0%
!	CTCTCTAACATAGAAGGTGT+TGG	-	Chr3:85074042-85074061	None:intergenic	40.0%
!	CTTGTCCTTGATGGATCTTA+GGG	-	Chr3:85074382-85074401	None:intergenic	40.0%
!	GATTGAAGGTGATGATGATG+AGG	-	Chr3:85074262-85074281	None:intergenic	40.0%
!	TCTTGTCCTTGATGGATCTT+AGG	-	Chr3:85074383-85074402	None:intergenic	40.0%
!	TTTTGTGCTGTAGCAAGATC+AGG	-	Chr3:85074332-85074351	None:intergenic	40.0%
!!	AAAAGTACCTTGGTTGTGAG+AGG	-	Chr3:85074152-85074171	None:intergenic	40.0%
!!	TGTAGAAGGTATTGGACTGA+AGG	+	Chr3:85074180-85074199	MsG0380016553.01.T01:intron	40.0%
!!	TTGTTTGTGGTGGATAAGCT+AGG	-	Chr3:85074412-85074431	None:intergenic	40.0%
!!!	GGTTTTGAGAAGCAGATTGA+GGG	-	Chr3:85074361-85074380	None:intergenic	40.0%
	AATCTATGGACACAGCTCAG+TGG	+	Chr3:85073545-85073564	MsG0380016553.01.T01:exon	45.0%
	ACTATAGCCTCTCACAACCA+AGG	+	Chr3:85074142-85074161	MsG0380016553.01.T01:intron	45.0%
	AGAAATGTTCCTGTAGGTGG+TGG	+	Chr3:85074213-85074232	MsG0380016553.01.T01:intron	45.0%
	ATCTATGGACACAGCTCAGT+GGG	+	Chr3:85073546-85073565	MsG0380016553.01.T01:exon	45.0%
	TTTCTTGAACCACCACCTAC+AGG	-	Chr3:85074225-85074244	None:intergenic	45.0%
!!	AGAAGGTATTGGACTGAAGG+TGG	+	Chr3:85074183-85074202	MsG0380016553.01.T01:intron	45.0%
!!!	GGGTTTTGAGAAGCAGATTG+AGG	-	Chr3:85074362-85074381	None:intergenic	45.0%
!!!	TATTATTTTTGAAAAATTTA+GGG	+	Chr3:85073968-85073987	MsG0380016553.01.T01:intron	5.0%
!!!	TTATTATTTTTGAAAAATTT+AGG	+	Chr3:85073967-85073986	MsG0380016553.01.T01:intron	5.0%
	GGACACAGCTCAGTGGGCAC+AGG	+	Chr3:85073552-85073571	MsG0380016553.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	85073440	85074646	85073440	ID=MsG0380016553.01;Name=MsG0380016553.01
Chr3	mRNA	85073440	85074646	85073440	ID=MsG0380016553.01.T01;Parent=MsG0380016553.01;Name=MsG0380016553.01.T01;_AED=0.32;_eAED=0.32;_QI=110\|0.5\|0.33\|1\|0\|0\|3\|0\|129
Chr3	exon	85073440	85073573	85073440	ID=MsG0380016553.01.T01:exon:16160;Parent=MsG0380016553.01.T01
Chr3	exon	85073989	85074052	85073989	ID=MsG0380016553.01.T01:exon:16161;Parent=MsG0380016553.01.T01
Chr3	exon	85074345	85074646	85074345	ID=MsG0380016553.01.T01:exon:16162;Parent=MsG0380016553.01.T01
Chr3	five_prime_UTR	85073440	85073549	85073440	ID=MsG0380016553.01.T01:five_prime_utr;Parent=MsG0380016553.01.T01
Chr3	CDS	85073550	85073573	85073550	ID=MsG0380016553.01.T01:cds;Parent=MsG0380016553.01.T01
Chr3	CDS	85073989	85074052	85073989	ID=MsG0380016553.01.T01:cds;Parent=MsG0380016553.01.T01
Chr3	CDS	85074345	85074646	85074345	ID=MsG0380016553.01.T01:cds;Parent=MsG0380016553.01.T01

Gene Sequence

>MsG0380016553.01.T01

ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGATTGGTTAAACAATGGATGGATCAACTTCAAATTCAAAACCAACACCTTCTATCACAAAATAATTTCCCTCAATCTGCTTCTCAAAACCCTAAGATCCATCAAGGACAAGATCTTAACCTAGCTTATCCACCACAAACAACTGAGGATAATTATAATACCATATCTAAATTCATTGAGCTTCCTTACACAACTGATCAAGACAAAACTACAAGTGCTATGGAGCTTCTGAAAACTGCTTCTTCATCAAGGGGTTTGAATTCTTTTATGCCTATGACTTTGTCTGAGTCTAGTGCAATGTATAATTCAAGTGGTTTTGCTTTGCAAGATTTTAAGCTTGGGTTAATTTTGGTTTAG

Protein sequence

>MsG0380016553.01.T01

MDTAQWAQGNIGLVKQWMDQLQIQNQHLLSQNNFPQSASQNPKIHQGQDLNLAYPPQTTEDNYNTISKFIELPYTTDQDKTTSAMELLKTASSSRGLNSFMPMTLSESSAMYNSSGFALQDFKLGLILV*