Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023832.01.T01 | XP_003630761.1 | 67.722 | 158 | 35 | 4 | 31 | 186 | 150 | 293 | 1.64E-56 | 190 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023832.01.T01 | Q9ZSY8 | 51.205 | 166 | 58 | 7 | 31 | 186 | 153 | 305 | 7.90E-38 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023832.01.T01 | G7L869 | 67.722 | 158 | 35 | 4 | 31 | 186 | 150 | 293 | 7.86e-57 | 190 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0480023832.01.T01 | TR | AUX/IAA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0480023832.01 | 0.803157 | 3.984979e-49 | 1.988191e-46 |
| MsG0080047974.01 | MsG0480023832.01 | 0.813191 | 2.900736e-51 | 1.881475e-48 |
| MsG0080048600.01 | MsG0480023832.01 | 0.801421 | 9.074634e-49 | 4.331843e-46 |
| MsG0080048701.01 | MsG0480023832.01 | 0.826891 | 2.115155e-54 | 2.009624e-51 |
| MsG0080049058.01 | MsG0480023832.01 | 0.827642 | 1.397423e-54 | 1.356994e-51 |
| MsG0080049140.01 | MsG0480023832.01 | 0.857679 | 1.384902e-62 | 3.446012e-59 |
| MsG0180000085.01 | MsG0480023832.01 | 0.811751 | 5.984183e-51 | 3.735002e-48 |
| MsG0180000178.01 | MsG0480023832.01 | 0.815330 | 9.772227e-52 | 6.717462e-49 |
| MsG0180000215.01 | MsG0480023832.01 | 0.824856 | 6.433558e-54 | 5.768003e-51 |
| MsG0180000353.01 | MsG0480023832.01 | 0.803838 | 2.879637e-49 | 1.462091e-46 |
| MsG0180000373.01 | MsG0480023832.01 | 0.840053 | 1.096272e-57 | 1.543226e-54 |
| MsG0180001006.01 | MsG0480023832.01 | 0.841756 | 3.916410e-58 | 5.811683e-55 |
| MsG0180003361.01 | MsG0480023832.01 | 0.817952 | 2.524572e-52 | 1.864575e-49 |
| MsG0180003656.01 | MsG0480023832.01 | 0.828531 | 8.535941e-55 | 8.507390e-52 |
| MsG0180003669.01 | MsG0480023832.01 | 0.820895 | 5.386200e-53 | 4.316429e-50 |
| MsG0180003898.01 | MsG0480023832.01 | 0.805759 | 1.143096e-49 | 6.098050e-47 |
| MsG0180003920.01 | MsG0480023832.01 | 0.818136 | 2.294727e-52 | 1.703402e-49 |
| MsG0180003994.01 | MsG0480023832.01 | 0.801362 | 9.334668e-49 | 4.449390e-46 |
| MsG0180004049.01 | MsG0480023832.01 | 0.805819 | 1.110284e-49 | 5.931986e-47 |
| MsG0180004099.01 | MsG0480023832.01 | 0.855471 | 6.172486e-62 | 1.426667e-58 |
| MsG0180004320.01 | MsG0480023832.01 | 0.814284 | 1.666011e-51 | 1.113231e-48 |
| MsG0180004389.01 | MsG0480023832.01 | 0.819673 | 1.026446e-52 | 7.950749e-50 |
| MsG0180004711.01 | MsG0480023832.01 | 0.827342 | 1.649311e-54 | 1.588011e-51 |
| MsG0180004754.01 | MsG0480023832.01 | 0.811273 | 7.603526e-51 | 4.685984e-48 |
| MsG0180004970.01 | MsG0480023832.01 | 0.864110 | 1.539226e-64 | 4.777028e-61 |
| MsG0180005388.01 | MsG0480023832.01 | -0.843842 | 1.092297e-58 | 1.730920e-55 |
| MsG0180005393.01 | MsG0480023832.01 | 0.809764 | 1.610607e-50 | 9.539072e-48 |
| MsG0180005664.01 | MsG0480023832.01 | 0.801503 | 8.730812e-49 | 4.176427e-46 |
| MsG0180005860.01 | MsG0480023832.01 | 0.828901 | 6.948417e-55 | 6.999510e-52 |
| MsG0180005921.01 | MsG0480023832.01 | 0.807948 | 3.938791e-50 | 2.223162e-47 |
| MsG0180006000.01 | MsG0480023832.01 | 0.810379 | 1.187143e-50 | 7.144427e-48 |
| MsG0280006299.01 | MsG0480023832.01 | 0.814221 | 1.720236e-51 | 1.147460e-48 |
| MsG0280006311.01 | MsG0480023832.01 | 0.859719 | 3.404362e-63 | 9.077918e-60 |
| MsG0280006375.01 | MsG0480023832.01 | 0.800176 | 1.629655e-48 | 7.537530e-46 |
| MsG0280010698.01 | MsG0480023832.01 | 0.800969 | 1.122884e-48 | 5.299681e-46 |
| MsG0280010779.01 | MsG0480023832.01 | 0.846889 | 1.635487e-59 | 2.855977e-56 |
| MsG0280010795.01 | MsG0480023832.01 | 0.809816 | 1.569125e-50 | 9.305809e-48 |
| MsG0280010856.01 | MsG0480023832.01 | 0.820818 | 5.609335e-53 | 4.485522e-50 |
| MsG0280011003.01 | MsG0480023832.01 | 0.836012 | 1.200371e-56 | 1.493404e-53 |
| MsG0280011013.01 | MsG0480023832.01 | 0.818739 | 1.675039e-52 | 1.264268e-49 |
| MsG0280011014.01 | MsG0480023832.01 | 0.838545 | 2.698274e-57 | 3.625857e-54 |
| MsG0280011282.01 | MsG0480023832.01 | 0.889930 | 1.558156e-73 | 1.282931e-69 |
| MsG0380011925.01 | MsG0480023832.01 | 0.821999 | 2.995053e-53 | 2.475609e-50 |
| MsG0380012146.01 | MsG0480023832.01 | 0.839212 | 1.814158e-57 | 2.488001e-54 |
| MsG0380012471.01 | MsG0480023832.01 | 0.899483 | 1.895460e-77 | 2.348820e-73 |
| MsG0380012694.01 | MsG0480023832.01 | 0.800701 | 1.274043e-48 | 5.971734e-46 |
| MsG0380013404.01 | MsG0480023832.01 | 0.809778 | 1.598864e-50 | 9.473161e-48 |
| MsG0380013475.01 | MsG0480023832.01 | 0.805872 | 1.082305e-49 | 5.790323e-47 |
| MsG0380013636.01 | MsG0480023832.01 | 0.806587 | 7.652562e-50 | 4.169316e-47 |
| MsG0380013834.01 | MsG0480023832.01 | 0.806777 | 6.977495e-50 | 3.820120e-47 |
| MsG0380014289.01 | MsG0480023832.01 | 0.814669 | 1.369891e-51 | 9.249095e-49 |
| MsG0380014537.01 | MsG0480023832.01 | 0.803376 | 3.591111e-49 | 1.801673e-46 |
| MsG0380014703.01 | MsG0480023832.01 | 0.809580 | 1.763708e-50 | 1.039511e-47 |
| MsG0380014808.01 | MsG0480023832.01 | 0.833119 | 6.403706e-56 | 7.305466e-53 |
| MsG0480018507.01 | MsG0480023832.01 | 0.831769 | 1.383424e-55 | 1.516310e-52 |
| MsG0480018861.01 | MsG0480023832.01 | 0.826395 | 2.778037e-54 | 2.602135e-51 |
| MsG0480018879.01 | MsG0480023832.01 | 0.820681 | 6.032253e-53 | 4.804985e-50 |
| MsG0480018919.01 | MsG0480023832.01 | 0.873191 | 1.779582e-67 | 7.654934e-64 |
| MsG0480019020.01 | MsG0480023832.01 | 0.804793 | 1.821799e-49 | 9.479951e-47 |
| MsG0480019276.01 | MsG0480023832.01 | 0.803982 | 2.687267e-49 | 1.369513e-46 |
| MsG0480019635.01 | MsG0480023832.01 | 0.821552 | 3.799469e-53 | 3.101044e-50 |
| MsG0480019922.01 | MsG0480023832.01 | 0.837324 | 5.558015e-57 | 7.194112e-54 |
| MsG0480020263.01 | MsG0480023832.01 | 0.802386 | 5.750445e-49 | 2.813267e-46 |
| MsG0480020692.01 | MsG0480023832.01 | 0.823076 | 1.683159e-53 | 1.434612e-50 |
| MsG0480022164.01 | MsG0480023832.01 | 0.811272 | 7.607982e-51 | 4.688646e-48 |
| MsG0480022213.01 | MsG0480023832.01 | -0.812746 | 3.629590e-51 | 2.326601e-48 |
| MsG0480022325.01 | MsG0480023832.01 | 0.859513 | 3.927965e-63 | 1.039997e-59 |
| MsG0480022331.01 | MsG0480023832.01 | 0.808026 | 3.790936e-50 | 2.144157e-47 |
| MsG0480022795.01 | MsG0480023832.01 | 0.827418 | 1.581927e-54 | 1.526422e-51 |
| MsG0480022836.01 | MsG0480023832.01 | 0.816603 | 5.079139e-52 | 3.615245e-49 |
| MsG0480022866.01 | MsG0480023832.01 | 0.826445 | 2.702804e-54 | 2.535271e-51 |
| MsG0480022971.01 | MsG0480023832.01 | 0.818352 | 2.049750e-52 | 1.530796e-49 |
| MsG0480023130.01 | MsG0480023832.01 | 0.800738 | 1.252145e-48 | 5.874752e-46 |
| MsG0480023341.01 | MsG0480023832.01 | 0.820467 | 6.753687e-53 | 5.348360e-50 |
| MsG0480023600.01 | MsG0480023832.01 | 0.803978 | 2.692874e-49 | 1.372206e-46 |
| MsG0480023707.01 | MsG0480023832.01 | 0.859106 | 5.202927e-63 | 1.358310e-59 |
| MsG0480023832.01 | MsG0580024035.01 | 0.809409 | 1.919572e-50 | 1.126211e-47 |
| MsG0480023832.01 | MsG0580024129.01 | 0.834891 | 2.305052e-56 | 2.772689e-53 |
| MsG0480023832.01 | MsG0580024478.01 | 0.809942 | 1.474696e-50 | 8.774491e-48 |
| MsG0480023832.01 | MsG0580024489.01 | 0.837274 | 5.726913e-57 | 7.400962e-54 |
| MsG0480023832.01 | MsG0580024758.01 | 0.869150 | 3.840194e-66 | 1.426198e-62 |
| MsG0480023832.01 | MsG0580025766.01 | 0.832825 | 7.578934e-56 | 8.569227e-53 |
| MsG0480023832.01 | MsG0580026070.01 | 0.807877 | 4.077226e-50 | 2.296975e-47 |
| MsG0480023832.01 | MsG0580026307.01 | 0.805276 | 1.443702e-49 | 7.605936e-47 |
| MsG0480023832.01 | MsG0580026593.01 | 0.817621 | 2.999205e-52 | 2.195097e-49 |
| MsG0480023832.01 | MsG0580027031.01 | 0.800010 | 1.761554e-48 | 8.113415e-46 |
| MsG0480023832.01 | MsG0580027091.01 | 0.810468 | 1.135867e-50 | 6.852242e-48 |
| MsG0480023832.01 | MsG0580027431.01 | 0.833613 | 4.822897e-56 | 5.583064e-53 |
| MsG0480023832.01 | MsG0580028176.01 | 0.810338 | 1.211303e-50 | 7.282032e-48 |
| MsG0480023832.01 | MsG0580028478.01 | 0.805812 | 1.114218e-49 | 5.951821e-47 |
| MsG0480023832.01 | MsG0580029298.01 | 0.815648 | 8.299807e-52 | 5.755733e-49 |
| MsG0480023832.01 | MsG0580029640.01 | 0.827270 | 1.716107e-54 | 1.648749e-51 |
| MsG0480023832.01 | MsG0680030633.01 | 0.857851 | 1.231807e-62 | 3.082635e-59 |
| MsG0480023832.01 | MsG0680031353.01 | 0.801014 | 1.099599e-48 | 5.195764e-46 |
| MsG0480023832.01 | MsG0680031549.01 | 0.810969 | 8.846978e-51 | 5.409511e-48 |
| MsG0480023832.01 | MsG0680033623.01 | 0.801301 | 9.607035e-49 | 4.572129e-46 |
| MsG0480023832.01 | MsG0680034598.01 | 0.877911 | 4.296146e-69 | 2.199110e-65 |
| MsG0480023832.01 | MsG0680034722.01 | 0.814910 | 1.211084e-51 | 8.229994e-49 |
| MsG0480023832.01 | MsG0780035979.01 | 0.805010 | 1.640925e-49 | 8.586327e-47 |
| MsG0480023832.01 | MsG0780036477.01 | 0.849320 | 3.487852e-60 | 6.587501e-57 |
| MsG0480023832.01 | MsG0780036663.01 | 0.816862 | 4.442321e-52 | 3.184542e-49 |
| MsG0480023832.01 | MsG0780036752.01 | 0.834331 | 3.189321e-56 | 3.772920e-53 |
| MsG0480023832.01 | MsG0780036815.01 | 0.853180 | 2.832667e-61 | 6.067644e-58 |
| MsG0480023832.01 | MsG0780036816.01 | 0.819949 | 8.875969e-53 | 6.928643e-50 |
| MsG0480023832.01 | MsG0780036852.01 | 0.818867 | 1.566814e-52 | 1.186831e-49 |
| MsG0480023832.01 | MsG0780037918.01 | 0.806893 | 6.594908e-50 | 3.621512e-47 |
| MsG0480023832.01 | MsG0780038424.01 | 0.848243 | 6.939630e-60 | 1.265461e-56 |
| MsG0480023832.01 | MsG0780038802.01 | 0.802421 | 5.656555e-49 | 2.769785e-46 |
| MsG0480023832.01 | MsG0780038803.01 | 0.804530 | 2.067066e-49 | 1.068254e-46 |
| MsG0480023832.01 | MsG0780038871.01 | 0.802282 | 6.041925e-49 | 2.947933e-46 |
| MsG0480023832.01 | MsG0780039059.01 | 0.807425 | 5.087643e-50 | 2.832784e-47 |
| MsG0480023832.01 | MsG0780039137.01 | 0.904839 | 8.064490e-80 | 1.269970e-75 |
| MsG0480023832.01 | MsG0780039462.01 | -0.823582 | 1.282039e-53 | 1.108380e-50 |
| MsG0480023832.01 | MsG0780040030.01 | 0.802049 | 6.746995e-49 | 3.272384e-46 |
| MsG0480023832.01 | MsG0780040509.01 | 0.812729 | 3.661989e-51 | 2.346289e-48 |
| MsG0480023832.01 | MsG0780040632.01 | 0.805450 | 1.327308e-49 | 7.024352e-47 |
| MsG0480023832.01 | MsG0780040723.01 | 0.822737 | 2.018661e-53 | 1.704147e-50 |
| MsG0480023832.01 | MsG0780040841.01 | 0.864538 | 1.131461e-64 | 3.564914e-61 |
| MsG0480023832.01 | MsG0780040896.01 | 0.879508 | 1.176862e-69 | 6.396821e-66 |
| MsG0480023832.01 | MsG0780041063.01 | 0.811502 | 6.781804e-51 | 4.205213e-48 |
| MsG0480023832.01 | MsG0780041535.01 | 0.842121 | 3.137254e-58 | 4.709750e-55 |
| MsG0480023832.01 | MsG0780041559.01 | 0.802249 | 6.136433e-49 | 2.991537e-46 |
| MsG0480023832.01 | MsG0880041860.01 | 0.847821 | 9.071203e-60 | 1.632168e-56 |
| MsG0480023832.01 | MsG0880041883.01 | 0.823762 | 1.163414e-53 | 1.011060e-50 |
| MsG0480023832.01 | MsG0880041986.01 | 0.820587 | 6.340144e-53 | 5.037033e-50 |
| MsG0480023832.01 | MsG0880042046.01 | 0.823481 | 1.353538e-53 | 1.166850e-50 |
| MsG0480023832.01 | MsG0880042212.01 | 0.808248 | 3.400018e-50 | 1.934466e-47 |
| MsG0480023832.01 | MsG0880042543.01 | 0.800307 | 1.532648e-48 | 7.113044e-46 |
| MsG0480023832.01 | MsG0880042779.01 | 0.844524 | 7.168622e-59 | 1.160486e-55 |
| MsG0480023832.01 | MsG0880042961.01 | 0.810897 | 9.170138e-51 | 5.596100e-48 |
| MsG0480023832.01 | MsG0880043299.01 | 0.809613 | 1.735383e-50 | 1.023728e-47 |
| MsG0480023832.01 | MsG0880043516.01 | 0.808590 | 2.874109e-50 | 1.649826e-47 |
| MsG0480023832.01 | MsG0880043614.01 | 0.827437 | 1.565511e-54 | 1.511344e-51 |
| MsG0480023832.01 | MsG0880044782.01 | 0.827169 | 1.814517e-54 | 1.738077e-51 |
| MsG0480023832.01 | MsG0880045257.01 | 0.829533 | 4.881882e-55 | 5.010164e-52 |
| MsG0480023832.01 | MsG0880045691.01 | 0.811706 | 6.121663e-51 | 3.816160e-48 |
| MsG0480023832.01 | MsG0880046012.01 | 0.865943 | 4.091573e-65 | 1.355175e-61 |
| MsG0480023832.01 | MsG0880046101.01 | 0.806750 | 7.067853e-50 | 3.866990e-47 |
| MsG0480023832.01 | MsG0880046479.01 | 0.828048 | 1.116545e-54 | 1.097277e-51 |
| MsG0480023832.01 | MsG0880046788.01 | 0.836529 | 8.872106e-57 | 1.121078e-53 |
| MsG0480023832.01 | MsG0880046922.01 | 0.808319 | 3.282708e-50 | 1.871209e-47 |
| MsG0480023832.01 | MsG0880047120.01 | 0.802959 | 4.379877e-49 | 2.174106e-46 |
| MsG0380015190.01 | MsG0480023832.01 | 0.812565 | 3.976977e-51 | 2.537117e-48 |
| MsG0380015548.01 | MsG0480023832.01 | 0.831054 | 2.074634e-55 | 2.225837e-52 |
| MsG0380015566.01 | MsG0480023832.01 | 0.816408 | 5.617016e-52 | 3.976724e-49 |
| MsG0380015631.01 | MsG0480023832.01 | 0.805221 | 1.482057e-49 | 7.797084e-47 |
| MsG0380015677.01 | MsG0480023832.01 | 0.865367 | 6.219049e-65 | 2.018130e-61 |
| MsG0380015805.01 | MsG0480023832.01 | 0.805356 | 1.388682e-49 | 7.331569e-47 |
| MsG0380016090.01 | MsG0480023832.01 | 0.801719 | 7.886556e-49 | 3.793012e-46 |
| MsG0380016553.01 | MsG0480023832.01 | 0.898642 | 4.344899e-77 | 5.180165e-73 |
| MsG0380016703.01 | MsG0480023832.01 | 0.852932 | 3.336596e-61 | 7.086076e-58 |
| MsG0380016765.01 | MsG0480023832.01 | 0.800518 | 1.388230e-48 | 6.477085e-46 |
| MsG0380016994.01 | MsG0480023832.01 | 0.843371 | 1.460321e-58 | 2.280105e-55 |
| MsG0380017049.01 | MsG0480023832.01 | 0.828186 | 1.033964e-54 | 1.020205e-51 |
| MsG0380017063.01 | MsG0480023832.01 | -0.837014 | 6.673947e-57 | 8.557835e-54 |
| MsG0380017159.01 | MsG0480023832.01 | 0.800535 | 1.377237e-48 | 6.428406e-46 |
| MsG0380017239.01 | MsG0480023832.01 | 0.816207 | 6.228968e-52 | 4.386129e-49 |
| MsG0380017958.01 | MsG0480023832.01 | 0.822126 | 2.799140e-53 | 2.322062e-50 |
| MsG0380017996.01 | MsG0480023832.01 | 0.815372 | 9.562551e-52 | 6.581010e-49 |
| MsG0380017998.01 | MsG0480023832.01 | 0.806103 | 9.678120e-50 | 5.208258e-47 |
| MsG0480018163.01 | MsG0480023832.01 | 0.811212 | 7.836296e-51 | 4.822025e-48 |
| MsG0480018346.01 | MsG0480023832.01 | 0.813761 | 2.173407e-51 | 1.431775e-48 |
| MsG0480018397.01 | MsG0480023832.01 | 0.874852 | 4.884221e-68 | 2.233346e-64 |
| MsG0280006591.01 | MsG0480023832.01 | 0.816705 | 4.817547e-52 | 3.438560e-49 |
| MsG0280007609.01 | MsG0480023832.01 | 0.802390 | 5.739449e-49 | 2.808167e-46 |
| MsG0280007997.01 | MsG0480023832.01 | 0.806962 | 6.376322e-50 | 3.507778e-47 |
| MsG0280008280.01 | MsG0480023832.01 | 0.881623 | 2.057854e-70 | 1.214376e-66 |
| MsG0280008284.01 | MsG0480023832.01 | 0.805701 | 1.175552e-49 | 6.261951e-47 |
| MsG0280008679.01 | MsG0480023832.01 | 0.807094 | 5.977500e-50 | 3.299700e-47 |
| MsG0280009493.01 | MsG0480023832.01 | 0.881227 | 2.860559e-70 | 1.662239e-66 |
| MsG0280009514.01 | MsG0480023832.01 | 0.851821 | 6.912845e-61 | 1.416348e-57 |
| MsG0280009794.01 | MsG0480023832.01 | 0.808099 | 3.657662e-50 | 2.072783e-47 |
| MsG0280009835.01 | MsG0480023832.01 | 0.831709 | 1.431516e-55 | 1.566162e-52 |
| MsG0280010176.01 | MsG0480023832.01 | 0.801564 | 8.485248e-49 | 4.065093e-46 |
| MsG0280010491.01 | MsG0480023832.01 | 0.823282 | 1.506398e-53 | 1.291351e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023832.01.T01 | MTR_8g103030 | 67.722 | 158 | 35 | 4 | 31 | 186 | 150 | 293 | 1.99e-60 | 190 |
| MsG0480023832.01.T01 | MTR_6g488150 | 57.233 | 159 | 50 | 5 | 31 | 186 | 111 | 254 | 5.45e-49 | 159 |
| MsG0480023832.01.T01 | MTR_2g101500 | 49.697 | 165 | 54 | 5 | 31 | 186 | 182 | 326 | 5.37e-39 | 135 |
| MsG0480023832.01.T01 | MTR_1g093240 | 49.677 | 155 | 59 | 4 | 35 | 185 | 96 | 235 | 1.02e-38 | 132 |
| MsG0480023832.01.T01 | MTR_1g080860 | 54.887 | 133 | 41 | 4 | 55 | 185 | 137 | 252 | 8.32e-37 | 128 |
| MsG0480023832.01.T01 | MTR_8g067530 | 45.732 | 164 | 61 | 5 | 31 | 186 | 213 | 356 | 1.05e-35 | 128 |
| MsG0480023832.01.T01 | MTR_7g096090 | 51.908 | 131 | 48 | 3 | 55 | 185 | 134 | 249 | 1.45e-35 | 125 |
| MsG0480023832.01.T01 | MTR_1g070520 | 52.206 | 136 | 51 | 3 | 50 | 185 | 123 | 244 | 2.12e-35 | 124 |
| MsG0480023832.01.T01 | MTR_5g030710 | 45.455 | 165 | 61 | 5 | 31 | 186 | 191 | 335 | 2.30e-35 | 126 |
| MsG0480023832.01.T01 | MTR_5g067350 | 50.725 | 138 | 44 | 4 | 53 | 186 | 230 | 347 | 1.39e-34 | 125 |
| MsG0480023832.01.T01 | MTR_1g093240 | 46.207 | 145 | 59 | 4 | 35 | 175 | 96 | 225 | 3.34e-30 | 110 |
| MsG0480023832.01.T01 | MTR_1g080860 | 52.033 | 123 | 40 | 4 | 55 | 175 | 137 | 242 | 2.34e-29 | 108 |
| MsG0480023832.01.T01 | MTR_1g040675 | 43.750 | 144 | 49 | 6 | 36 | 175 | 68 | 183 | 3.55e-24 | 94.0 |
| MsG0480023832.01.T01 | MTR_1g076270 | 42.657 | 143 | 50 | 6 | 36 | 174 | 64 | 178 | 7.25e-24 | 92.8 |
| MsG0480023832.01.T01 | MTR_1g093350 | 42.657 | 143 | 50 | 6 | 36 | 174 | 64 | 178 | 7.25e-24 | 92.8 |
| MsG0480023832.01.T01 | MTR_2g102490 | 43.333 | 120 | 49 | 3 | 50 | 169 | 83 | 183 | 3.33e-23 | 91.7 |
| MsG0480023832.01.T01 | MTR_1g070830 | 45.902 | 122 | 38 | 3 | 54 | 175 | 109 | 202 | 1.13e-22 | 90.5 |
| MsG0480023832.01.T01 | MTR_1g069495 | 44.094 | 127 | 61 | 3 | 55 | 181 | 147 | 263 | 1.97e-22 | 91.3 |
| MsG0480023832.01.T01 | MTR_4g011880 | 38.562 | 153 | 61 | 5 | 30 | 178 | 49 | 172 | 1.84e-20 | 84.0 |
| MsG0480023832.01.T01 | MTR_1g093240 | 40.323 | 124 | 55 | 4 | 35 | 154 | 96 | 204 | 7.43e-18 | 77.8 |
| MsG0480023832.01.T01 | MTR_2g100780 | 39.496 | 119 | 58 | 5 | 54 | 170 | 148 | 254 | 5.34e-16 | 73.9 |
| MsG0480023832.01.T01 | MTR_2g100780 | 39.496 | 119 | 58 | 5 | 54 | 170 | 148 | 254 | 7.61e-16 | 73.6 |
| MsG0480023832.01.T01 | MTR_6g488150 | 52.941 | 85 | 37 | 3 | 31 | 114 | 111 | 193 | 9.30e-16 | 72.0 |
| MsG0480023832.01.T01 | MTR_8g014520 | 33.918 | 171 | 93 | 7 | 2 | 170 | 108 | 260 | 1.32e-15 | 73.2 |
| MsG0480023832.01.T01 | MTR_8g014520 | 33.918 | 171 | 93 | 7 | 2 | 170 | 108 | 260 | 1.53e-15 | 72.8 |
| MsG0480023832.01.T01 | MTR_4g124300 | 33.557 | 149 | 66 | 5 | 26 | 169 | 62 | 182 | 4.26e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023832.01.T01 | AT4G29080 | 51.205 | 166 | 58 | 7 | 31 | 186 | 153 | 305 | 8.05e-39 | 135 |
| MsG0480023832.01.T01 | AT3G04730 | 44.444 | 171 | 64 | 4 | 31 | 185 | 80 | 235 | 1.51e-37 | 130 |
| MsG0480023832.01.T01 | AT4G14550 | 50.704 | 142 | 55 | 3 | 44 | 185 | 101 | 227 | 1.13e-36 | 127 |
| MsG0480023832.01.T01 | AT3G23050 | 46.626 | 163 | 60 | 5 | 35 | 185 | 95 | 242 | 1.48e-35 | 125 |
| MsG0480023832.01.T01 | AT1G04250 | 51.908 | 131 | 49 | 3 | 55 | 185 | 112 | 228 | 3.62e-34 | 120 |
| MsG0480023832.01.T01 | AT2G22670 | 44.099 | 161 | 67 | 6 | 31 | 185 | 175 | 318 | 9.57e-32 | 117 |
| MsG0480023832.01.T01 | AT2G22670 | 44.099 | 161 | 67 | 6 | 31 | 185 | 175 | 318 | 9.57e-32 | 117 |
| MsG0480023832.01.T01 | AT2G22670 | 44.099 | 161 | 67 | 6 | 31 | 185 | 192 | 335 | 1.05e-31 | 117 |
| MsG0480023832.01.T01 | AT5G65670 | 47.552 | 143 | 62 | 3 | 43 | 185 | 206 | 335 | 1.60e-31 | 116 |
| MsG0480023832.01.T01 | AT4G14550 | 44.898 | 147 | 64 | 4 | 31 | 175 | 86 | 217 | 4.15e-30 | 110 |
| MsG0480023832.01.T01 | AT5G65670 | 46.897 | 145 | 62 | 4 | 43 | 185 | 206 | 337 | 1.24e-29 | 111 |
| MsG0480023832.01.T01 | AT2G22670 | 42.857 | 161 | 67 | 7 | 31 | 185 | 175 | 316 | 1.24e-28 | 108 |
| MsG0480023832.01.T01 | AT2G22670 | 42.857 | 161 | 67 | 7 | 31 | 185 | 175 | 316 | 1.24e-28 | 108 |
| MsG0480023832.01.T01 | AT5G43700 | 43.137 | 153 | 49 | 8 | 32 | 175 | 59 | 182 | 2.64e-24 | 94.4 |
| MsG0480023832.01.T01 | AT1G04240 | 44.526 | 137 | 46 | 5 | 39 | 175 | 80 | 186 | 3.82e-24 | 94.0 |
| MsG0480023832.01.T01 | AT1G04240 | 44.526 | 137 | 46 | 5 | 39 | 175 | 180 | 286 | 2.12e-23 | 94.4 |
| MsG0480023832.01.T01 | AT3G23030 | 42.143 | 140 | 52 | 5 | 35 | 174 | 60 | 170 | 1.46e-22 | 89.7 |
| MsG0480023832.01.T01 | AT3G15540 | 41.860 | 129 | 44 | 3 | 55 | 181 | 98 | 197 | 5.56e-22 | 88.6 |
| MsG0480023832.01.T01 | AT3G23030 | 44.000 | 125 | 42 | 4 | 50 | 174 | 161 | 257 | 5.99e-22 | 90.1 |
| MsG0480023832.01.T01 | AT4G14560 | 45.763 | 118 | 34 | 5 | 55 | 171 | 76 | 164 | 1.74e-21 | 86.7 |
| MsG0480023832.01.T01 | AT2G33310 | 41.860 | 129 | 56 | 5 | 52 | 180 | 127 | 236 | 6.84e-21 | 87.0 |
| MsG0480023832.01.T01 | AT2G33310 | 41.860 | 129 | 56 | 5 | 52 | 180 | 127 | 236 | 6.84e-21 | 87.0 |
| MsG0480023832.01.T01 | AT1G04550 | 41.353 | 133 | 55 | 6 | 55 | 186 | 126 | 236 | 6.99e-21 | 86.7 |
| MsG0480023832.01.T01 | AT2G33310 | 41.860 | 129 | 56 | 5 | 52 | 180 | 128 | 237 | 8.06e-21 | 86.7 |
| MsG0480023832.01.T01 | AT4G28640 | 41.912 | 136 | 59 | 5 | 42 | 175 | 125 | 242 | 2.74e-20 | 85.1 |
| MsG0480023832.01.T01 | AT1G52830 | 41.353 | 133 | 42 | 5 | 46 | 175 | 86 | 185 | 6.70e-20 | 83.2 |
| MsG0480023832.01.T01 | AT4G28640 | 41.791 | 134 | 58 | 5 | 42 | 173 | 125 | 240 | 7.26e-20 | 84.3 |
| MsG0480023832.01.T01 | AT4G28640 | 41.791 | 134 | 58 | 5 | 42 | 173 | 125 | 240 | 1.66e-19 | 84.0 |
| MsG0480023832.01.T01 | AT3G16500 | 32.164 | 171 | 92 | 5 | 2 | 170 | 104 | 252 | 8.65e-19 | 81.6 |
| MsG0480023832.01.T01 | AT3G16500 | 32.164 | 171 | 92 | 5 | 2 | 170 | 104 | 252 | 9.28e-19 | 81.6 |
| MsG0480023832.01.T01 | AT1G15580 | 43.478 | 115 | 34 | 4 | 55 | 169 | 76 | 159 | 6.20e-18 | 77.0 |
| MsG0480023832.01.T01 | AT4G14550 | 40.909 | 110 | 50 | 3 | 44 | 153 | 101 | 195 | 1.43e-16 | 74.3 |
| MsG0480023832.01.T01 | AT1G04100 | 40.146 | 137 | 65 | 7 | 42 | 175 | 138 | 260 | 3.81e-16 | 74.3 |
| MsG0480023832.01.T01 | AT5G25890 | 35.156 | 128 | 49 | 4 | 54 | 181 | 81 | 174 | 6.53e-16 | 72.0 |
| MsG0480023832.01.T01 | AT3G23050 | 43.434 | 99 | 41 | 3 | 56 | 154 | 127 | 210 | 8.86e-16 | 72.4 |
| MsG0480023832.01.T01 | AT1G51950 | 31.638 | 177 | 90 | 7 | 2 | 170 | 97 | 250 | 1.77e-14 | 70.1 |
| MsG0480023832.01.T01 | AT3G17600 | 33.613 | 119 | 47 | 3 | 49 | 167 | 68 | 154 | 7.90e-14 | 66.2 |
Find 57 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATTGTCATCAATATATT+TGG | 0.201062 | 4:+90300187 | None:intergenic |
| TTTAATCATAATCGTTATTA+AGG | 0.215910 | 4:-90300096 | MsG0480023832.01.T01:three_prime_UTR |
| AAACATCAGAACACAGAATA+TGG | 0.265830 | 4:+90301251 | None:intergenic |
| TCTGCATCAGCATCATTCTT+TGG | 0.281999 | 4:+90301448 | None:intergenic |
| AGATCCACTTTCCTCAAGTA+TGG | 0.291849 | 4:+90301379 | None:intergenic |
| GGCCTCCAATCCGATCTTTC+CGG | 0.299985 | 4:-90301494 | MsG0480023832.01.T01:CDS |
| TATATTGATGACAATATATT+AGG | 0.315365 | 4:-90300182 | MsG0480023832.01.T01:three_prime_UTR |
| TTTGGCCTACTATAAAGTTT+AGG | 0.323975 | 4:+90300205 | None:intergenic |
| TACATATATGCATTCAGAAT+TGG | 0.333438 | 4:+90301423 | None:intergenic |
| TTACATTAACTTGAAGAGAT+AGG | 0.334650 | 4:+90300027 | None:intergenic |
| TAGACGTTTCAAGGCTTCTT+AGG | 0.336881 | 4:-90300127 | MsG0480023832.01.T01:three_prime_UTR |
| TAGACGACTACAAGTCATTT+TGG | 0.341438 | 4:-90300152 | MsG0480023832.01.T01:three_prime_UTR |
| TAACTAGAAAATTCCTTAAC+CGG | 0.372093 | 4:+90299915 | None:intergenic |
| ATGAAGAGTTCTGAAGCAAT+TGG | 0.391710 | 4:-90300488 | MsG0480023832.01.T01:CDS |
| GCATCAGCATCATTCTTTGG+AGG | 0.424381 | 4:+90301451 | None:intergenic |
| CCGAGTCTTGCAAGAGGTTG+AGG | 0.432404 | 4:-90300514 | MsG0480023832.01.T01:CDS |
| ATACAAAATTTATATACTAA+TGG | 0.450255 | 4:+90300070 | None:intergenic |
| AGATTGGTGGATCTCCTTCA+TGG | 0.457760 | 4:-90300782 | MsG0480023832.01.T01:CDS |
| CTATAAAGTTTAGGAGTATG+AGG | 0.461628 | 4:+90300214 | None:intergenic |
| TGCTAGTTGGTGATGTTCCA+TGG | 0.467311 | 4:-90300716 | MsG0480023832.01.T01:CDS |
| ATCACCATCCTTGTCTTCAT+AGG | 0.471235 | 4:+90300743 | None:intergenic |
| ATACTCCTAAACTTTATAGT+AGG | 0.476895 | 4:-90300210 | MsG0480023832.01.T01:three_prime_UTR |
| TACATTAACTTGAAGAGATA+GGG | 0.487761 | 4:+90300028 | None:intergenic |
| TGAAGAGTTCTGAAGCAATT+GGG | 0.489200 | 4:-90300487 | MsG0480023832.01.T01:CDS |
| AAATTCCTTAACCGGACAAA+AGG | 0.496519 | 4:+90299923 | None:intergenic |
| AACATCAGAACACAGAATAT+GGG | 0.504663 | 4:+90301252 | None:intergenic |
| GATCTTTCCGGAGAACTCAA+TGG | 0.518896 | 4:-90301482 | MsG0480023832.01.T01:CDS |
| ATGAAGACAAGGATGGTGAT+TGG | 0.522716 | 4:-90300740 | MsG0480023832.01.T01:CDS |
| GCGAATCAGGGCGCAAGTTG+TGG | 0.525531 | 4:-90301519 | MsG0480023832.01.T01:CDS |
| ATTGAGTTCTCCGGAAAGAT+CGG | 0.526425 | 4:+90301484 | None:intergenic |
| TCCTGCAGCACCTCGAGCCA+TGG | 0.531399 | 4:-90300382 | MsG0480023832.01.T01:intron |
| TTGAGGAAAGTGGATCTGAA+TGG | 0.538432 | 4:-90301373 | MsG0480023832.01.T01:CDS |
| TGTGAAACCATTGAGTTCTC+CGG | 0.541312 | 4:+90301475 | None:intergenic |
| TATGTAAAAGTCAGCATGGA+AGG | 0.544619 | 4:-90301406 | MsG0480023832.01.T01:CDS |
| TCTAAGTGAAAGTAGATTGG+TGG | 0.547921 | 4:-90300795 | MsG0480023832.01.T01:intron |
| AGTTCTGAAGCAATTGGGCT+AGG | 0.552508 | 4:-90300482 | MsG0480023832.01.T01:intron |
| TGCTCCATACTTGAGGAAAG+TGG | 0.552637 | 4:-90301383 | MsG0480023832.01.T01:CDS |
| TGATTCCGTAGTATGATCGT+TGG | 0.561015 | 4:-90301580 | None:intergenic |
| CATACATAAGCAGCGCAAGA+AGG | 0.562229 | 4:+90300267 | None:intergenic |
| AGTCTATTCTATATACAAGA+AGG | 0.562879 | 4:-90300239 | MsG0480023832.01.T01:three_prime_UTR |
| ATCAGGGCGCAAGTTGTGGA+TGG | 0.564269 | 4:-90301515 | MsG0480023832.01.T01:CDS |
| AGAAAATAGACGTACTCCCA+TGG | 0.566126 | 4:+90300699 | None:intergenic |
| CTCCGGAAAGATCGGATTGG+AGG | 0.566341 | 4:+90301492 | None:intergenic |
| CATATATGTAAAAGTCAGCA+TGG | 0.572072 | 4:-90301410 | MsG0480023832.01.T01:CDS |
| GCTAGTTGGTGATGTTCCAT+GGG | 0.572324 | 4:-90300715 | MsG0480023832.01.T01:CDS |
| CCTCAACCTCTTGCAAGACT+CGG | 0.585897 | 4:+90300514 | None:intergenic |
| GTTCTCCGGAAAGATCGGAT+TGG | 0.587857 | 4:+90301489 | None:intergenic |
| TTACATTTCTCCATGGCTCG+AGG | 0.588053 | 4:+90300372 | None:intergenic |
| TGATGACAATATATTAGGCA+TGG | 0.592594 | 4:-90300177 | MsG0480023832.01.T01:three_prime_UTR |
| GCATGATCACAAATATCTCT+CGG | 0.606623 | 4:-90301218 | MsG0480023832.01.T01:intron |
| GATGGTGATTGGATGCTAGT+TGG | 0.610602 | 4:-90300729 | MsG0480023832.01.T01:CDS |
| TGGAAGGTGCTCCATACTTG+AGG | 0.612400 | 4:-90301390 | MsG0480023832.01.T01:CDS |
| GCACATATTCTGAACCATGA+AGG | 0.616615 | 4:+90300768 | None:intergenic |
| AGATATTTGTGATCATGCAT+CGG | 0.632001 | 4:+90301223 | None:intergenic |
| ATGTGCTACCTATGAAGACA+AGG | 0.648719 | 4:-90300751 | MsG0480023832.01.T01:CDS |
| TGTTCACCGAGTCTTGCAAG+AGG | 0.674237 | 4:-90300520 | MsG0480023832.01.T01:CDS |
| GCTACCTATGAAGACAAGGA+TGG | 0.739449 | 4:-90300747 | MsG0480023832.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAAAATTTATATACTAA+TGG | + | Chr4:90301399-90301418 | None:intergenic | 10.0% |
| !! | AATGAAATTTATGAAACAAT+CGG | - | Chr4:90300347-90300366 | MsG0480023832.01.T01:exon | 15.0% |
| !! | TATATTGTCATCAATATATT+TGG | + | Chr4:90301282-90301301 | None:intergenic | 15.0% |
| !! | TTTAATCATAATCGTTATTA+AGG | - | Chr4:90301370-90301389 | MsG0480023832.01.T01:CDS | 15.0% |
| !!! | ATCATTTTATTAAGCAAAAA+AGG | + | Chr4:90300583-90300602 | None:intergenic | 15.0% |
| !!! | GATTTTAATATAACAAACAT+TGG | + | Chr4:90301015-90301034 | None:intergenic | 15.0% |
| !!! | TATATTGATGACAATATATT+AGG | - | Chr4:90301284-90301303 | MsG0480023832.01.T01:CDS | 15.0% |
| !!! | TGATGTTATTTTGTTATTTT+AGG | - | Chr4:90300922-90300941 | MsG0480023832.01.T01:intron | 15.0% |
| !!! | ATTGATAGTTAGACTTATTT+TGG | - | Chr4:90300846-90300865 | MsG0480023832.01.T01:intron | 20.0% |
| !!! | TGATTTCTTTTTTCTCAATA+CGG | - | Chr4:90299917-90299936 | MsG0480023832.01.T01:three_prime_UTR | 20.0% |
| ! | AAATCTAAGTGAAAGTAGAT+TGG | - | Chr4:90300668-90300687 | MsG0480023832.01.T01:intron | 25.0% |
| ! | AGTCTATTCTATATACAAGA+AGG | - | Chr4:90301227-90301246 | MsG0480023832.01.T01:CDS | 25.0% |
| ! | ATACTCCTAAACTTTATAGT+AGG | - | Chr4:90301256-90301275 | MsG0480023832.01.T01:CDS | 25.0% |
| ! | TAACTAGAAAATTCCTTAAC+CGG | + | Chr4:90301554-90301573 | None:intergenic | 25.0% |
| ! | TACATATATGCATTCAGAAT+TGG | + | Chr4:90300046-90300065 | None:intergenic | 25.0% |
| ! | TTCAACAACAATAGAGAAAA+TGG | + | Chr4:90300435-90300454 | None:intergenic | 25.0% |
| ! | TTGATTCTAACATTGTTCAT+AGG | + | Chr4:90300872-90300891 | None:intergenic | 25.0% |
| !! | TACAACTCGATTTTCAATTT+GGG | + | Chr4:90300291-90300310 | None:intergenic | 25.0% |
| !! | TACATTAACTTGAAGAGATA+GGG | + | Chr4:90301441-90301460 | None:intergenic | 25.0% |
| !! | TTACATTAACTTGAAGAGAT+AGG | + | Chr4:90301442-90301461 | None:intergenic | 25.0% |
| !!! | GATACCTTCATATTTTTTGT+CGG | - | Chr4:90301043-90301062 | MsG0480023832.01.T01:intron | 25.0% |
| AAACATCAGAACACAGAATA+TGG | + | Chr4:90300218-90300237 | None:intergenic | 30.0% | |
| AACATCAGAACACAGAATAT+GGG | + | Chr4:90300217-90300236 | None:intergenic | 30.0% | |
| ACTTTACAGTACATTGCATA+TGG | - | Chr4:90300316-90300335 | MsG0480023832.01.T01:three_prime_UTR | 30.0% | |
| AGATATTTGTGATCATGCAT+CGG | + | Chr4:90300246-90300265 | None:intergenic | 30.0% | |
| CATATATGTAAAAGTCAGCA+TGG | - | Chr4:90300056-90300075 | MsG0480023832.01.T01:three_prime_UTR | 30.0% | |
| TGATGACAATATATTAGGCA+TGG | - | Chr4:90301289-90301308 | MsG0480023832.01.T01:CDS | 30.0% | |
| TGCAATGTACTGTAAAGTAT+AGG | + | Chr4:90300314-90300333 | None:intergenic | 30.0% | |
| TGCATGTATTTATATGTCAC+AGG | - | Chr4:90300485-90300504 | MsG0480023832.01.T01:CDS | 30.0% | |
| TTTGGCCTACTATAAAGTTT+AGG | + | Chr4:90301264-90301283 | None:intergenic | 30.0% | |
| ! | AATGATGAACATCTTTTCGA+AGG | + | Chr4:90300153-90300172 | None:intergenic | 30.0% |
| ! | ATGGTTGAAAAAGAGTGTAT+TGG | + | Chr4:90300416-90300435 | None:intergenic | 30.0% |
| ! | CTATAAAGTTTAGGAGTATG+AGG | + | Chr4:90301255-90301274 | None:intergenic | 30.0% |
| ! | CTCTATTGTTGTTGAACTTA+TGG | - | Chr4:90300439-90300458 | MsG0480023832.01.T01:intron | 30.0% |
| ! | GAAAAAGAGTGTATTGGTAA+CGG | + | Chr4:90300410-90300429 | None:intergenic | 30.0% |
| ! | GTACAACTCGATTTTCAATT+TGG | + | Chr4:90300292-90300311 | None:intergenic | 30.0% |
| !! | ATGTTTTTGTTGACAAATCC+AGG | - | Chr4:90300610-90300629 | MsG0480023832.01.T01:intron | 30.0% |
| !!! | ATGGTTTTTTGAGCTCTTAT+AGG | - | Chr4:90300112-90300131 | MsG0480023832.01.T01:three_prime_UTR | 30.0% |
| !!! | GAACATCATGCTTTGTTTTT+TGG | - | Chr4:90301500-90301519 | MsG0480023832.01.T01:CDS | 30.0% |
| !!! | TGGTTTTTTGAGCTCTTATA+GGG | - | Chr4:90300113-90300132 | MsG0480023832.01.T01:three_prime_UTR | 30.0% |
| AAATTCCTTAACCGGACAAA+AGG | + | Chr4:90301546-90301565 | None:intergenic | 35.0% | |
| ATCTTCATTCTCAACCATGT+TGG | + | Chr4:90300531-90300550 | None:intergenic | 35.0% | |
| GAGTCCGACAAAAAATATGA+AGG | + | Chr4:90301050-90301069 | None:intergenic | 35.0% | |
| GCATGATCACAAATATCTCT+CGG | - | Chr4:90300248-90300267 | MsG0480023832.01.T01:three_prime_UTR | 35.0% | |
| TATGTAAAAGTCAGCATGGA+AGG | - | Chr4:90300060-90300079 | MsG0480023832.01.T01:three_prime_UTR | 35.0% | |
| TCTAAGTGAAAGTAGATTGG+TGG | - | Chr4:90300671-90300690 | MsG0480023832.01.T01:intron | 35.0% | |
| ! | ATACGGTTTTTATGCGAATC+AGG | - | Chr4:90299934-90299953 | MsG0480023832.01.T01:three_prime_UTR | 35.0% |
| ! | CAAAGGTATGACTACTGTAT+AGG | + | Chr4:90300556-90300575 | None:intergenic | 35.0% |
| ! | TAAGCAAAAAAGGCATGCAA+AGG | + | Chr4:90300573-90300592 | None:intergenic | 35.0% |
| ! | TACGGTTTTTATGCGAATCA+GGG | - | Chr4:90299935-90299954 | MsG0480023832.01.T01:three_prime_UTR | 35.0% |
| ! | TAGACGACTACAAGTCATTT+TGG | - | Chr4:90301314-90301333 | MsG0480023832.01.T01:CDS | 35.0% |
| ! | TCATTTCGTTTCCTTTTGTC+CGG | - | Chr4:90301532-90301551 | MsG0480023832.01.T01:CDS | 35.0% |
| !! | ATGAAGAGTTCTGAAGCAAT+TGG | - | Chr4:90300978-90300997 | MsG0480023832.01.T01:intron | 35.0% |
| !! | ATTTTGGTGTAGACGTTTCA+AGG | - | Chr4:90301330-90301349 | MsG0480023832.01.T01:CDS | 35.0% |
| !! | TGAAGAGTTCTGAAGCAATT+GGG | - | Chr4:90300979-90300998 | MsG0480023832.01.T01:intron | 35.0% |
| AATATCTCTCGGTGATGTGA+TGG | - | Chr4:90300259-90300278 | MsG0480023832.01.T01:three_prime_UTR | 40.0% | |
| AGAAAATAGACGTACTCCCA+TGG | + | Chr4:90300770-90300789 | None:intergenic | 40.0% | |
| AGATCCACTTTCCTCAAGTA+TGG | + | Chr4:90300090-90300109 | None:intergenic | 40.0% | |
| ATATGTCACAGGTCTGATTG+TGG | - | Chr4:90300496-90300515 | MsG0480023832.01.T01:CDS | 40.0% | |
| ATCACCATCCTTGTCTTCAT+AGG | + | Chr4:90300726-90300745 | None:intergenic | 40.0% | |
| ATGAAGACAAGGATGGTGAT+TGG | - | Chr4:90300726-90300745 | MsG0480023832.01.T01:CDS | 40.0% | |
| ATGTGCTACCTATGAAGACA+AGG | - | Chr4:90300715-90300734 | MsG0480023832.01.T01:CDS | 40.0% | |
| ATTGAGTTCTCCGGAAAGAT+CGG | + | Chr4:90299985-90300004 | None:intergenic | 40.0% | |
| GCACATATTCTGAACCATGA+AGG | + | Chr4:90300701-90300720 | None:intergenic | 40.0% | |
| TAGACGTTTCAAGGCTTCTT+AGG | - | Chr4:90301339-90301358 | MsG0480023832.01.T01:CDS | 40.0% | |
| TCTGCATCAGCATCATTCTT+TGG | + | Chr4:90300021-90300040 | None:intergenic | 40.0% | |
| TGTGAAACCATTGAGTTCTC+CGG | + | Chr4:90299994-90300013 | None:intergenic | 40.0% | |
| TTGACAAATCCAGGTCAATG+TGG | - | Chr4:90300619-90300638 | MsG0480023832.01.T01:intron | 40.0% | |
| TTGAGGAAAGTGGATCTGAA+TGG | - | Chr4:90300093-90300112 | MsG0480023832.01.T01:three_prime_UTR | 40.0% | |
| ! | GCGACTTTTACATTTCTCCA+TGG | + | Chr4:90301104-90301123 | None:intergenic | 40.0% |
| CATACATAAGCAGCGCAAGA+AGG | + | Chr4:90301202-90301221 | None:intergenic | 45.0% | |
| GATCTTTCCGGAGAACTCAA+TGG | - | Chr4:90299984-90300003 | MsG0480023832.01.T01:three_prime_UTR | 45.0% | |
| GATGGTGATTGGATGCTAGT+TGG | - | Chr4:90300737-90300756 | MsG0480023832.01.T01:CDS | 45.0% | |
| GCATCAGCATCATTCTTTGG+AGG | + | Chr4:90300018-90300037 | None:intergenic | 45.0% | |
| GCTACCTATGAAGACAAGGA+TGG | - | Chr4:90300719-90300738 | MsG0480023832.01.T01:CDS | 45.0% | |
| TGCTCCATACTTGAGGAAAG+TGG | - | Chr4:90300083-90300102 | MsG0480023832.01.T01:three_prime_UTR | 45.0% | |
| TTACATTTCTCCATGGCTCG+AGG | + | Chr4:90301097-90301116 | None:intergenic | 45.0% | |
| TTCTCAACCATGTTGGCACT+TGG | + | Chr4:90300524-90300543 | None:intergenic | 45.0% | |
| ! | AGATTGGTGGATCTCCTTCA+TGG | - | Chr4:90300684-90300703 | MsG0480023832.01.T01:intron | 45.0% |
| ! | CGTTTCCTTTTGTCCGGTTA+AGG | - | Chr4:90301538-90301557 | MsG0480023832.01.T01:CDS | 45.0% |
| !! | AGTTCTGAAGCAATTGGGCT+AGG | - | Chr4:90300984-90301003 | MsG0480023832.01.T01:intron | 45.0% |
| !! | GCTAGTTGGTGATGTTCCAT+GGG | - | Chr4:90300751-90300770 | MsG0480023832.01.T01:CDS | 45.0% |
| !! | TGCTAGTTGGTGATGTTCCA+TGG | - | Chr4:90300750-90300769 | MsG0480023832.01.T01:CDS | 45.0% |
| CCAGGTCAATGTGGCTCATA+TGG | - | Chr4:90300628-90300647 | MsG0480023832.01.T01:intron | 50.0% | |
| CCATATGAGCCACATTGACC+TGG | + | Chr4:90300631-90300650 | None:intergenic | 50.0% | |
| CCTCAACCTCTTGCAAGACT+CGG | + | Chr4:90300955-90300974 | None:intergenic | 50.0% | |
| GTTCTCCGGAAAGATCGGAT+TGG | + | Chr4:90299980-90299999 | None:intergenic | 50.0% | |
| TGTTCACCGAGTCTTGCAAG+AGG | - | Chr4:90300946-90300965 | MsG0480023832.01.T01:intron | 50.0% | |
| !! | TGGAAGGTGCTCCATACTTG+AGG | - | Chr4:90300076-90300095 | MsG0480023832.01.T01:three_prime_UTR | 50.0% |
| ATCAGGGCGCAAGTTGTGGA+TGG | - | Chr4:90299951-90299970 | MsG0480023832.01.T01:three_prime_UTR | 55.0% | |
| CCGAGTCTTGCAAGAGGTTG+AGG | - | Chr4:90300952-90300971 | MsG0480023832.01.T01:intron | 55.0% | |
| GGCCTCCAATCCGATCTTTC+CGG | - | Chr4:90299972-90299991 | MsG0480023832.01.T01:three_prime_UTR | 55.0% | |
| ! | CTCCGGAAAGATCGGATTGG+AGG | + | Chr4:90299977-90299996 | None:intergenic | 55.0% |
| ! | TGTGGTGCCAAGTGCCAACA+TGG | - | Chr4:90300514-90300533 | MsG0480023832.01.T01:CDS | 55.0% |
| GCGAATCAGGGCGCAAGTTG+TGG | - | Chr4:90299947-90299966 | MsG0480023832.01.T01:three_prime_UTR | 60.0% | |
| TCCTGCAGCACCTCGAGCCA+TGG | - | Chr4:90301084-90301103 | MsG0480023832.01.T01:intron | 65.0% | |
| !! | TCCATGGCTCGAGGTGCTGC+AGG | + | Chr4:90301088-90301107 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 90299898 | 90301590 | 90299898 | ID=MsG0480023832.01;Name=MsG0480023832.01 |
| Chr4 | mRNA | 90299898 | 90301590 | 90299898 | ID=MsG0480023832.01.T01;Parent=MsG0480023832.01;Name=MsG0480023832.01.T01;_AED=0.51;_eAED=0.51;_QI=0|0.66|0.5|1|0.66|0.75|4|461|186 |
| Chr4 | exon | 90299898 | 90300396 | 90299898 | ID=MsG0480023832.01.T01:exon:7569;Parent=MsG0480023832.01.T01 |
| Chr4 | exon | 90300483 | 90300544 | 90300483 | ID=MsG0480023832.01.T01:exon:7568;Parent=MsG0480023832.01.T01 |
| Chr4 | exon | 90300714 | 90300802 | 90300714 | ID=MsG0480023832.01.T01:exon:7567;Parent=MsG0480023832.01.T01 |
| Chr4 | exon | 90301219 | 90301590 | 90301219 | ID=MsG0480023832.01.T01:exon:7566;Parent=MsG0480023832.01.T01 |
| Chr4 | CDS | 90301219 | 90301590 | 90301219 | ID=MsG0480023832.01.T01:cds;Parent=MsG0480023832.01.T01 |
| Chr4 | CDS | 90300714 | 90300802 | 90300714 | ID=MsG0480023832.01.T01:cds;Parent=MsG0480023832.01.T01 |
| Chr4 | CDS | 90300483 | 90300544 | 90300483 | ID=MsG0480023832.01.T01:cds;Parent=MsG0480023832.01.T01 |
| Chr4 | CDS | 90300359 | 90300396 | 90300359 | ID=MsG0480023832.01.T01:cds;Parent=MsG0480023832.01.T01 |
| Chr4 | three_prime_UTR | 90299898 | 90300358 | 90299898 | ID=MsG0480023832.01.T01:three_prime_utr;Parent=MsG0480023832.01.T01 |
| Gene Sequence |
| Protein sequence |
