Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000520.01.T03 | XP_013469496.1 | 99.64 | 278 | 1 | 0 | 1 | 278 | 102 | 379 | 0 | 575 |
| MsG0180000520.01.T01 | XP_013469496.1 | 99.736 | 379 | 1 | 0 | 1 | 379 | 1 | 379 | 0 | 784 |
| MsG0180000520.01.T02 | XP_013469496.1 | 99.698 | 331 | 1 | 0 | 1 | 331 | 49 | 379 | 0 | 689 |
| MsG0180000520.01.T04 | PKI74626.1 | 100 | 155 | 0 | 0 | 1 | 155 | 1 | 155 | 7.57E-110 | 319 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000520.01.T01 | O24534 | 97.889 | 379 | 8 | 0 | 1 | 379 | 1 | 379 | 0 | 775 |
| MsG0180000520.01.T02 | O24534 | 97.583 | 331 | 8 | 0 | 1 | 331 | 49 | 379 | 0 | 680 |
| MsG0180000520.01.T03 | O24534 | 97.482 | 278 | 7 | 0 | 1 | 278 | 102 | 379 | 0 | 568 |
| MsG0180000520.01.T04 | O49169 | 99.355 | 155 | 1 | 0 | 1 | 155 | 1 | 155 | 8.97E-111 | 325 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000520.01.T01 | G7I9L3 | 99.736 | 379 | 1 | 0 | 1 | 379 | 1 | 379 | 0.0 | 784 |
| MsG0180000520.01.T02 | G7I9L3 | 99.698 | 331 | 1 | 0 | 1 | 331 | 49 | 379 | 0.0 | 689 |
| MsG0180000520.01.T03 | A0A072VPF0 | 99.281 | 278 | 2 | 0 | 1 | 278 | 102 | 379 | 0.0 | 575 |
| MsG0180000520.01.T04 | A0A2I0L3A7 | 100.000 | 155 | 0 | 0 | 1 | 155 | 1 | 155 | 3.62e-110 | 319 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000520.01.T03 | MTR_1g495705 | 99.640 | 278 | 1 | 0 | 1 | 278 | 102 | 379 | 0.0 | 575 |
| MsG0180000520.01.T03 | MTR_1g095650 | 99.640 | 278 | 1 | 0 | 1 | 278 | 102 | 379 | 0.0 | 575 |
| MsG0180000520.01.T03 | MTR_1g095650 | 99.640 | 278 | 1 | 0 | 1 | 278 | 1 | 278 | 0.0 | 575 |
| MsG0180000520.01.T03 | MTR_1g095703 | 99.281 | 278 | 2 | 0 | 1 | 278 | 102 | 379 | 0.0 | 575 |
| MsG0180000520.01.T03 | MTR_6g021800 | 97.482 | 278 | 7 | 0 | 1 | 278 | 102 | 379 | 0.0 | 568 |
| MsG0180000520.01.T03 | MTR_6g021805 | 97.482 | 278 | 7 | 0 | 1 | 278 | 102 | 379 | 0.0 | 568 |
| MsG0180000520.01.T03 | MTR_4g014810 | 96.403 | 278 | 10 | 0 | 1 | 278 | 102 | 379 | 0.0 | 563 |
| MsG0180000520.01.T03 | MTR_1g013680 | 97.153 | 281 | 5 | 1 | 1 | 278 | 102 | 382 | 0.0 | 558 |
| MsG0180000520.01.T03 | MTR_1g085410 | 80.935 | 278 | 53 | 0 | 1 | 278 | 102 | 379 | 1.22e-166 | 469 |
| MsG0180000520.01.T03 | MTR_1g024175 | 76.978 | 278 | 64 | 0 | 1 | 278 | 102 | 379 | 2.39e-161 | 456 |
| MsG0180000520.01.T03 | MTR_1g101870 | 81.295 | 278 | 47 | 3 | 1 | 278 | 102 | 374 | 6.33e-160 | 465 |
| MsG0180000520.01.T03 | MTR_1g101870 | 81.295 | 278 | 47 | 3 | 1 | 278 | 102 | 374 | 1.40e-159 | 466 |
| MsG0180000520.01.T03 | MTR_2g082665 | 74.823 | 282 | 69 | 1 | 1 | 280 | 61 | 342 | 8.35e-156 | 444 |
| MsG0180000520.01.T03 | MTR_2g082730 | 74.823 | 282 | 69 | 1 | 1 | 280 | 87 | 368 | 2.60e-155 | 444 |
| MsG0180000520.01.T03 | MTR_8g014590 | 76.786 | 280 | 63 | 1 | 1 | 278 | 102 | 381 | 2.26e-154 | 438 |
| MsG0180000520.01.T03 | MTR_1g089520 | 73.180 | 261 | 67 | 2 | 19 | 278 | 106 | 364 | 1.23e-138 | 402 |
| MsG0180000520.01.T03 | MTR_5g037350 | 71.583 | 278 | 79 | 0 | 1 | 278 | 149 | 426 | 2.15e-138 | 402 |
| MsG0180000520.01.T03 | MTR_2g037420 | 64.894 | 282 | 73 | 2 | 1 | 280 | 85 | 342 | 1.25e-126 | 368 |
| MsG0180000520.01.T03 | MTR_8g008740 | 77.130 | 223 | 51 | 0 | 1 | 223 | 103 | 325 | 3.05e-126 | 368 |
| MsG0180000520.01.T03 | MTR_8g013910 | 61.224 | 294 | 79 | 5 | 1 | 278 | 102 | 376 | 7.45e-116 | 340 |
| MsG0180000520.01.T03 | MTR_2g080210 | 60.432 | 278 | 77 | 2 | 1 | 278 | 105 | 349 | 7.82e-110 | 325 |
| MsG0180000520.01.T03 | MTR_1g112460 | 65.044 | 226 | 42 | 3 | 54 | 278 | 1 | 190 | 1.93e-93 | 277 |
| MsG0180000520.01.T03 | MTR_1g495735 | 71.523 | 151 | 33 | 1 | 139 | 279 | 106 | 256 | 1.80e-67 | 212 |
| MsG0180000520.01.T03 | MTR_4g054970 | 58.065 | 186 | 65 | 3 | 92 | 274 | 50 | 225 | 7.97e-64 | 202 |
| MsG0180000520.01.T03 | MTR_6g080420 | 36.268 | 284 | 167 | 6 | 1 | 276 | 186 | 463 | 1.22e-49 | 171 |
| MsG0180000520.01.T03 | MTR_8g106700 | 36.765 | 272 | 164 | 5 | 1 | 267 | 147 | 415 | 2.33e-48 | 167 |
| MsG0180000520.01.T03 | MTR_8g106700 | 36.765 | 272 | 164 | 5 | 1 | 267 | 141 | 409 | 2.92e-48 | 167 |
| MsG0180000520.01.T03 | MTR_8g106700 | 36.996 | 273 | 162 | 6 | 1 | 267 | 168 | 436 | 4.35e-48 | 167 |
| MsG0180000520.01.T03 | MTR_8g087950 | 31.449 | 283 | 186 | 5 | 1 | 278 | 370 | 649 | 6.90e-41 | 150 |
| MsG0180000520.01.T03 | MTR_8g087950 | 31.449 | 283 | 186 | 5 | 1 | 278 | 443 | 722 | 1.15e-40 | 150 |
| MsG0180000520.01.T03 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 112 | 193 | 2 | 83 | 1.57e-29 | 110 |
| MsG0180000520.01.T03 | MTR_7g098190 | 51.261 | 119 | 42 | 2 | 1 | 119 | 50 | 152 | 3.22e-29 | 109 |
| MsG0180000520.01.T03 | MTR_1g101880 | 96.226 | 53 | 2 | 0 | 1 | 53 | 102 | 154 | 5.73e-29 | 111 |
| MsG0180000520.01.T03 | MTR_7g094460 | 33.197 | 244 | 136 | 9 | 1 | 235 | 143 | 368 | 7.24e-25 | 103 |
| MsG0180000520.01.T03 | MTR_2g021300 | 31.818 | 242 | 142 | 7 | 1 | 235 | 130 | 355 | 8.41e-24 | 100 |
| MsG0180000520.01.T03 | MTR_3g076660 | 34.061 | 229 | 120 | 9 | 1 | 214 | 172 | 384 | 2.74e-19 | 87.8 |
| MsG0180000520.01.T03 | MTR_1g024165 | 81.818 | 44 | 8 | 0 | 1 | 44 | 106 | 149 | 1.03e-16 | 75.9 |
| MsG0180000520.01.T01 | MTR_1g495705 | 99.736 | 379 | 1 | 0 | 1 | 379 | 1 | 379 | 0.0 | 784 |
| MsG0180000520.01.T01 | MTR_1g095650 | 99.736 | 379 | 1 | 0 | 1 | 379 | 1 | 379 | 0.0 | 784 |
| MsG0180000520.01.T01 | MTR_1g095703 | 99.472 | 379 | 2 | 0 | 1 | 379 | 1 | 379 | 0.0 | 783 |
| MsG0180000520.01.T01 | MTR_6g021800 | 97.889 | 379 | 8 | 0 | 1 | 379 | 1 | 379 | 0.0 | 776 |
| MsG0180000520.01.T01 | MTR_6g021805 | 97.889 | 379 | 8 | 0 | 1 | 379 | 1 | 379 | 0.0 | 776 |
| MsG0180000520.01.T01 | MTR_4g014810 | 97.361 | 379 | 10 | 0 | 1 | 379 | 1 | 379 | 0.0 | 773 |
| MsG0180000520.01.T01 | MTR_1g013680 | 97.644 | 382 | 6 | 1 | 1 | 379 | 1 | 382 | 0.0 | 762 |
| MsG0180000520.01.T01 | MTR_1g085410 | 82.586 | 379 | 66 | 0 | 1 | 379 | 1 | 379 | 0.0 | 649 |
| MsG0180000520.01.T01 | MTR_1g101870 | 82.322 | 379 | 62 | 3 | 1 | 379 | 1 | 374 | 0.0 | 640 |
| MsG0180000520.01.T01 | MTR_1g101870 | 82.322 | 379 | 62 | 3 | 1 | 379 | 1 | 374 | 0.0 | 639 |
| MsG0180000520.01.T01 | MTR_1g024175 | 78.364 | 379 | 82 | 0 | 1 | 379 | 1 | 379 | 0.0 | 630 |
| MsG0180000520.01.T01 | MTR_8g014590 | 79.528 | 381 | 76 | 1 | 1 | 379 | 1 | 381 | 0.0 | 613 |
| MsG0180000520.01.T01 | MTR_1g095650 | 99.640 | 278 | 1 | 0 | 102 | 379 | 1 | 278 | 0.0 | 576 |
| MsG0180000520.01.T01 | MTR_2g082730 | 73.107 | 383 | 86 | 2 | 1 | 381 | 1 | 368 | 0.0 | 571 |
| MsG0180000520.01.T01 | MTR_1g089520 | 72.149 | 377 | 87 | 3 | 4 | 379 | 5 | 364 | 0.0 | 558 |
| MsG0180000520.01.T01 | MTR_5g037350 | 66.667 | 414 | 101 | 1 | 3 | 379 | 13 | 426 | 0.0 | 546 |
| MsG0180000520.01.T01 | MTR_8g008740 | 78.769 | 325 | 68 | 1 | 1 | 324 | 1 | 325 | 0.0 | 540 |
| MsG0180000520.01.T01 | MTR_2g082665 | 67.363 | 383 | 82 | 2 | 1 | 381 | 1 | 342 | 0.0 | 513 |
| MsG0180000520.01.T01 | MTR_8g013910 | 64.304 | 395 | 106 | 5 | 1 | 379 | 1 | 376 | 3.21e-172 | 487 |
| MsG0180000520.01.T01 | MTR_2g037420 | 63.969 | 383 | 95 | 3 | 1 | 381 | 1 | 342 | 2.15e-169 | 481 |
| MsG0180000520.01.T01 | MTR_2g080210 | 63.613 | 382 | 103 | 4 | 1 | 379 | 1 | 349 | 8.61e-166 | 471 |
| MsG0180000520.01.T01 | MTR_1g112460 | 65.044 | 226 | 42 | 3 | 155 | 379 | 1 | 190 | 6.74e-92 | 277 |
| MsG0180000520.01.T01 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 2.37e-90 | 273 |
| MsG0180000520.01.T01 | MTR_6g080420 | 37.795 | 381 | 223 | 6 | 5 | 377 | 89 | 463 | 1.60e-83 | 263 |
| MsG0180000520.01.T01 | MTR_8g106700 | 38.275 | 371 | 219 | 6 | 4 | 368 | 43 | 409 | 1.30e-81 | 257 |
| MsG0180000520.01.T01 | MTR_8g106700 | 38.275 | 371 | 219 | 6 | 4 | 368 | 49 | 415 | 1.40e-81 | 257 |
| MsG0180000520.01.T01 | MTR_8g106700 | 38.275 | 371 | 219 | 6 | 4 | 368 | 70 | 436 | 3.15e-81 | 257 |
| MsG0180000520.01.T01 | MTR_8g087950 | 36.508 | 378 | 232 | 5 | 7 | 379 | 275 | 649 | 8.98e-80 | 259 |
| MsG0180000520.01.T01 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 4.09e-79 | 240 |
| MsG0180000520.01.T01 | MTR_8g087950 | 36.508 | 378 | 232 | 5 | 7 | 379 | 348 | 722 | 4.23e-79 | 258 |
| MsG0180000520.01.T01 | MTR_1g495735 | 72.000 | 150 | 32 | 1 | 240 | 379 | 106 | 255 | 4.35e-66 | 212 |
| MsG0180000520.01.T01 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 3.23e-17 | 82.0 |
| MsG0180000520.01.T01 | MTR_4g054970 | 58.065 | 186 | 65 | 3 | 193 | 375 | 50 | 225 | 1.30e-62 | 202 |
| MsG0180000520.01.T01 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 6.96e-13 | 68.9 |
| MsG0180000520.01.T01 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 6.44e-48 | 158 |
| MsG0180000520.01.T01 | MTR_7g094460 | 33.528 | 343 | 186 | 10 | 3 | 336 | 59 | 368 | 1.06e-43 | 157 |
| MsG0180000520.01.T01 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 1.42e-43 | 149 |
| MsG0180000520.01.T01 | MTR_2g021300 | 32.845 | 341 | 191 | 8 | 3 | 336 | 46 | 355 | 1.40e-42 | 154 |
| MsG0180000520.01.T01 | MTR_3g076660 | 33.841 | 328 | 171 | 10 | 3 | 315 | 88 | 384 | 8.06e-39 | 145 |
| MsG0180000520.01.T01 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 9.42e-29 | 110 |
| MsG0180000520.01.T01 | MTR_3g097250 | 26.838 | 272 | 142 | 10 | 9 | 272 | 85 | 307 | 4.00e-12 | 68.2 |
| MsG0180000520.01.T02 | MTR_1g495705 | 99.698 | 331 | 1 | 0 | 1 | 331 | 49 | 379 | 0.0 | 689 |
| MsG0180000520.01.T02 | MTR_1g095650 | 99.698 | 331 | 1 | 0 | 1 | 331 | 49 | 379 | 0.0 | 689 |
| MsG0180000520.01.T02 | MTR_1g095703 | 99.396 | 331 | 2 | 0 | 1 | 331 | 49 | 379 | 0.0 | 688 |
| MsG0180000520.01.T02 | MTR_6g021800 | 97.885 | 331 | 7 | 0 | 1 | 331 | 49 | 379 | 0.0 | 682 |
| MsG0180000520.01.T02 | MTR_6g021805 | 97.885 | 331 | 7 | 0 | 1 | 331 | 49 | 379 | 0.0 | 682 |
| MsG0180000520.01.T02 | MTR_4g014810 | 96.979 | 331 | 10 | 0 | 1 | 331 | 49 | 379 | 0.0 | 677 |
| MsG0180000520.01.T02 | MTR_1g013680 | 97.305 | 334 | 6 | 1 | 1 | 331 | 49 | 382 | 0.0 | 667 |
| MsG0180000520.01.T02 | MTR_1g095650 | 99.640 | 278 | 1 | 0 | 54 | 331 | 1 | 278 | 0.0 | 575 |
| MsG0180000520.01.T02 | MTR_1g085410 | 82.477 | 331 | 58 | 0 | 1 | 331 | 49 | 379 | 0.0 | 571 |
| MsG0180000520.01.T02 | MTR_1g101870 | 82.779 | 331 | 52 | 3 | 1 | 331 | 49 | 374 | 0.0 | 568 |
| MsG0180000520.01.T02 | MTR_1g101870 | 82.779 | 331 | 52 | 3 | 1 | 331 | 49 | 374 | 0.0 | 567 |
| MsG0180000520.01.T02 | MTR_1g024175 | 78.550 | 331 | 71 | 0 | 1 | 331 | 49 | 379 | 0.0 | 557 |
| MsG0180000520.01.T02 | MTR_8g014590 | 78.679 | 333 | 69 | 1 | 1 | 331 | 49 | 381 | 0.0 | 537 |
| MsG0180000520.01.T02 | MTR_2g082730 | 72.836 | 335 | 74 | 2 | 1 | 333 | 49 | 368 | 1.17e-177 | 503 |
| MsG0180000520.01.T02 | MTR_5g037350 | 73.414 | 331 | 88 | 0 | 1 | 331 | 96 | 426 | 4.33e-175 | 498 |
| MsG0180000520.01.T02 | MTR_1g089520 | 70.181 | 332 | 81 | 3 | 1 | 331 | 50 | 364 | 1.37e-169 | 483 |
| MsG0180000520.01.T02 | MTR_8g008740 | 78.986 | 276 | 58 | 0 | 1 | 276 | 50 | 325 | 6.51e-166 | 471 |
| MsG0180000520.01.T02 | MTR_2g082665 | 75.000 | 288 | 70 | 1 | 48 | 333 | 55 | 342 | 7.00e-159 | 454 |
| MsG0180000520.01.T02 | MTR_8g013910 | 63.401 | 347 | 92 | 5 | 1 | 331 | 49 | 376 | 4.94e-147 | 421 |
| MsG0180000520.01.T02 | MTR_2g037420 | 63.284 | 335 | 80 | 3 | 1 | 333 | 49 | 342 | 1.14e-145 | 419 |
| MsG0180000520.01.T02 | MTR_2g080210 | 62.048 | 332 | 92 | 3 | 1 | 331 | 51 | 349 | 3.02e-139 | 402 |
| MsG0180000520.01.T02 | MTR_1g112460 | 65.044 | 226 | 42 | 3 | 107 | 331 | 1 | 190 | 1.72e-92 | 277 |
| MsG0180000520.01.T02 | MTR_1g495735 | 72.000 | 150 | 32 | 1 | 192 | 331 | 106 | 255 | 1.22e-66 | 212 |
| MsG0180000520.01.T02 | MTR_8g087950 | 35.329 | 334 | 208 | 5 | 3 | 331 | 319 | 649 | 4.31e-64 | 215 |
| MsG0180000520.01.T02 | MTR_6g080420 | 35.714 | 336 | 202 | 6 | 2 | 329 | 134 | 463 | 5.79e-64 | 211 |
| MsG0180000520.01.T02 | MTR_1g101880 | 90.566 | 106 | 10 | 0 | 1 | 106 | 49 | 154 | 9.37e-64 | 203 |
| MsG0180000520.01.T02 | MTR_8g087950 | 35.329 | 334 | 208 | 5 | 3 | 331 | 392 | 722 | 1.15e-63 | 215 |
| MsG0180000520.01.T02 | MTR_4g054970 | 58.065 | 186 | 65 | 3 | 145 | 327 | 50 | 225 | 3.02e-63 | 202 |
| MsG0180000520.01.T02 | MTR_8g106700 | 36.308 | 325 | 197 | 6 | 2 | 320 | 89 | 409 | 3.03e-62 | 205 |
| MsG0180000520.01.T02 | MTR_8g106700 | 36.308 | 325 | 197 | 6 | 2 | 320 | 95 | 415 | 3.55e-62 | 205 |
| MsG0180000520.01.T02 | MTR_8g106700 | 36.308 | 325 | 197 | 6 | 2 | 320 | 116 | 436 | 6.36e-62 | 205 |
| MsG0180000520.01.T02 | MTR_1g024165 | 83.505 | 97 | 16 | 0 | 1 | 97 | 53 | 149 | 2.43e-54 | 175 |
| MsG0180000520.01.T02 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 8 | 172 | 10 | 152 | 6.94e-44 | 149 |
| MsG0180000520.01.T02 | MTR_7g094460 | 34.965 | 286 | 159 | 9 | 12 | 288 | 101 | 368 | 6.36e-39 | 143 |
| MsG0180000520.01.T02 | MTR_2g021300 | 33.803 | 284 | 165 | 7 | 12 | 288 | 88 | 355 | 2.11e-37 | 139 |
| MsG0180000520.01.T02 | MTR_3g076660 | 35.424 | 271 | 144 | 9 | 12 | 267 | 130 | 384 | 2.45e-32 | 126 |
| MsG0180000520.01.T02 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 165 | 246 | 2 | 83 | 4.77e-29 | 110 |
| MsG0180000520.01.T02 | MTR_8g014950 | 78.846 | 52 | 11 | 0 | 5 | 56 | 54 | 105 | 7.31e-23 | 92.0 |
| MsG0180000520.01.T04 | MTR_1g495705 | 99.355 | 155 | 1 | 0 | 1 | 155 | 1 | 155 | 8.28e-112 | 325 |
| MsG0180000520.01.T04 | MTR_1g095650 | 99.355 | 155 | 1 | 0 | 1 | 155 | 1 | 155 | 8.28e-112 | 325 |
| MsG0180000520.01.T04 | MTR_1g095703 | 99.355 | 155 | 1 | 0 | 1 | 155 | 1 | 155 | 9.75e-112 | 324 |
| MsG0180000520.01.T04 | MTR_6g021800 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 1.61e-111 | 324 |
| MsG0180000520.01.T04 | MTR_6g021805 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 1.61e-111 | 324 |
| MsG0180000520.01.T04 | MTR_4g014810 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 1.65e-111 | 324 |
| MsG0180000520.01.T04 | MTR_1g013680 | 96.104 | 154 | 6 | 0 | 1 | 154 | 1 | 154 | 2.35e-104 | 306 |
| MsG0180000520.01.T04 | MTR_1g085410 | 85.806 | 155 | 22 | 0 | 1 | 155 | 1 | 155 | 1.45e-95 | 283 |
| MsG0180000520.01.T04 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 9.84e-93 | 270 |
| MsG0180000520.01.T04 | MTR_1g024175 | 80.000 | 155 | 31 | 0 | 1 | 155 | 1 | 155 | 9.84e-89 | 266 |
| MsG0180000520.01.T04 | MTR_1g101870 | 85.806 | 155 | 20 | 1 | 1 | 155 | 1 | 153 | 2.27e-88 | 275 |
| MsG0180000520.01.T04 | MTR_1g101870 | 85.806 | 155 | 20 | 1 | 1 | 155 | 1 | 153 | 5.09e-88 | 275 |
| MsG0180000520.01.T04 | MTR_8g008740 | 80.128 | 156 | 30 | 1 | 1 | 155 | 1 | 156 | 1.59e-87 | 264 |
| MsG0180000520.01.T04 | MTR_8g014590 | 80.892 | 157 | 28 | 1 | 1 | 155 | 1 | 157 | 2.99e-82 | 249 |
| MsG0180000520.01.T04 | MTR_1g024165 | 79.720 | 143 | 29 | 0 | 3 | 145 | 7 | 149 | 5.41e-82 | 238 |
| MsG0180000520.01.T04 | MTR_5g037350 | 62.632 | 190 | 34 | 1 | 3 | 155 | 13 | 202 | 5.30e-77 | 239 |
| MsG0180000520.01.T04 | MTR_2g080210 | 73.418 | 158 | 39 | 2 | 1 | 155 | 1 | 158 | 6.90e-77 | 235 |
| MsG0180000520.01.T04 | MTR_8g013910 | 71.795 | 156 | 41 | 2 | 1 | 155 | 1 | 154 | 2.90e-72 | 223 |
| MsG0180000520.01.T04 | MTR_2g082730 | 74.834 | 151 | 23 | 1 | 5 | 155 | 5 | 140 | 2.96e-72 | 226 |
| MsG0180000520.01.T04 | MTR_1g089520 | 71.711 | 152 | 26 | 3 | 4 | 155 | 5 | 139 | 4.48e-68 | 215 |
| MsG0180000520.01.T04 | MTR_2g037420 | 67.097 | 155 | 34 | 1 | 1 | 155 | 1 | 138 | 6.00e-66 | 207 |
| MsG0180000520.01.T04 | MTR_8g014950 | 75.728 | 103 | 25 | 0 | 2 | 104 | 3 | 105 | 2.80e-51 | 159 |
| MsG0180000520.01.T04 | MTR_2g082665 | 60.265 | 151 | 19 | 1 | 5 | 155 | 5 | 114 | 1.79e-50 | 168 |
| MsG0180000520.01.T04 | MTR_8g087950 | 52.000 | 150 | 71 | 1 | 7 | 155 | 275 | 424 | 4.25e-49 | 167 |
| MsG0180000520.01.T04 | MTR_8g087950 | 52.000 | 150 | 71 | 1 | 7 | 155 | 348 | 497 | 4.59e-49 | 168 |
| MsG0180000520.01.T04 | MTR_6g080420 | 46.053 | 152 | 82 | 0 | 4 | 155 | 88 | 239 | 1.07e-44 | 153 |
| MsG0180000520.01.T04 | MTR_8g106700 | 45.395 | 152 | 83 | 0 | 4 | 155 | 43 | 194 | 2.57e-44 | 151 |
| MsG0180000520.01.T04 | MTR_8g106700 | 45.395 | 152 | 83 | 0 | 4 | 155 | 49 | 200 | 2.92e-44 | 151 |
| MsG0180000520.01.T04 | MTR_8g106700 | 45.395 | 152 | 83 | 0 | 4 | 155 | 70 | 221 | 5.56e-44 | 151 |
| MsG0180000520.01.T04 | MTR_1g095650 | 98.148 | 54 | 1 | 0 | 102 | 155 | 1 | 54 | 1.46e-31 | 115 |
| MsG0180000520.01.T04 | MTR_2g021300 | 36.601 | 153 | 75 | 2 | 3 | 155 | 46 | 176 | 8.09e-25 | 99.0 |
| MsG0180000520.01.T04 | MTR_7g094460 | 35.948 | 153 | 76 | 2 | 3 | 155 | 59 | 189 | 1.05e-24 | 99.0 |
| MsG0180000520.01.T04 | MTR_3g076660 | 34.868 | 152 | 77 | 2 | 3 | 154 | 88 | 217 | 1.78e-23 | 95.5 |
| MsG0180000520.01.T04 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 2.29e-19 | 82.8 |
| MsG0180000520.01.T04 | MTR_7g098190 | 63.077 | 65 | 14 | 3 | 56 | 118 | 10 | 66 | 3.43e-15 | 69.3 |
| MsG0180000520.01.T04 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 1.04e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000520.01.T03 | AT5G60390 | 96.403 | 278 | 10 | 0 | 1 | 278 | 102 | 379 | 0.0 | 562 |
| MsG0180000520.01.T03 | AT5G60390 | 96.403 | 278 | 10 | 0 | 1 | 278 | 102 | 379 | 0.0 | 562 |
| MsG0180000520.01.T03 | AT5G60390 | 96.403 | 278 | 10 | 0 | 1 | 278 | 102 | 379 | 0.0 | 562 |
| MsG0180000520.01.T03 | AT1G07920 | 96.403 | 278 | 10 | 0 | 1 | 278 | 102 | 379 | 0.0 | 562 |
| MsG0180000520.01.T03 | AT1G07940 | 96.403 | 278 | 10 | 0 | 1 | 278 | 102 | 379 | 0.0 | 562 |
| MsG0180000520.01.T03 | AT1G07940 | 96.403 | 278 | 10 | 0 | 1 | 278 | 102 | 379 | 0.0 | 562 |
| MsG0180000520.01.T03 | AT1G07940 | 96.403 | 278 | 10 | 0 | 1 | 278 | 102 | 379 | 0.0 | 562 |
| MsG0180000520.01.T03 | AT1G07940 | 96.403 | 278 | 10 | 0 | 1 | 278 | 102 | 379 | 0.0 | 562 |
| MsG0180000520.01.T03 | AT1G07930 | 96.403 | 278 | 10 | 0 | 1 | 278 | 102 | 379 | 0.0 | 562 |
| MsG0180000520.01.T03 | AT1G07930 | 98.052 | 154 | 3 | 0 | 1 | 154 | 102 | 255 | 2.60e-109 | 321 |
| MsG0180000520.01.T03 | AT1G07930 | 91.837 | 49 | 4 | 0 | 230 | 278 | 254 | 302 | 1.36e-24 | 101 |
| MsG0180000520.01.T03 | AT1G18070 | 35.943 | 281 | 172 | 5 | 1 | 276 | 196 | 473 | 2.53e-48 | 168 |
| MsG0180000520.01.T03 | AT1G18070 | 35.943 | 281 | 172 | 5 | 1 | 276 | 196 | 473 | 2.53e-48 | 168 |
| MsG0180000520.01.T03 | AT1G18070 | 34.932 | 292 | 171 | 6 | 1 | 276 | 196 | 484 | 1.78e-45 | 160 |
| MsG0180000520.01.T03 | AT5G10630 | 32.509 | 283 | 183 | 5 | 1 | 278 | 334 | 613 | 1.71e-43 | 157 |
| MsG0180000520.01.T03 | AT5G10630 | 32.509 | 283 | 183 | 5 | 1 | 278 | 335 | 614 | 1.72e-43 | 157 |
| MsG0180000520.01.T03 | AT5G10630 | 32.509 | 283 | 183 | 5 | 1 | 278 | 335 | 614 | 1.72e-43 | 157 |
| MsG0180000520.01.T03 | AT5G10630 | 32.509 | 283 | 183 | 5 | 1 | 278 | 405 | 684 | 2.35e-43 | 157 |
| MsG0180000520.01.T03 | AT5G10630 | 32.509 | 283 | 183 | 5 | 1 | 278 | 410 | 689 | 2.55e-43 | 157 |
| MsG0180000520.01.T03 | AT4G02930 | 32.245 | 245 | 138 | 8 | 1 | 235 | 147 | 373 | 4.68e-23 | 98.2 |
| MsG0180000520.01.T03 | AT4G20360 | 33.937 | 221 | 127 | 5 | 1 | 212 | 159 | 369 | 6.52e-21 | 92.4 |
| MsG0180000520.01.T03 | AT4G20360 | 33.937 | 221 | 127 | 5 | 1 | 212 | 159 | 369 | 6.52e-21 | 92.4 |
| MsG0180000520.01.T03 | AT1G35550 | 80.000 | 45 | 9 | 0 | 234 | 278 | 1 | 45 | 1.35e-19 | 82.0 |
| MsG0180000520.01.T01 | AT5G60390 | 97.098 | 379 | 11 | 0 | 1 | 379 | 1 | 379 | 0.0 | 769 |
| MsG0180000520.01.T01 | AT5G60390 | 97.098 | 379 | 11 | 0 | 1 | 379 | 1 | 379 | 0.0 | 769 |
| MsG0180000520.01.T01 | AT5G60390 | 97.098 | 379 | 11 | 0 | 1 | 379 | 1 | 379 | 0.0 | 769 |
| MsG0180000520.01.T01 | AT1G07920 | 97.098 | 379 | 11 | 0 | 1 | 379 | 1 | 379 | 0.0 | 769 |
| MsG0180000520.01.T01 | AT1G07940 | 97.098 | 379 | 11 | 0 | 1 | 379 | 1 | 379 | 0.0 | 769 |
| MsG0180000520.01.T01 | AT1G07940 | 97.098 | 379 | 11 | 0 | 1 | 379 | 1 | 379 | 0.0 | 769 |
| MsG0180000520.01.T01 | AT1G07940 | 97.098 | 379 | 11 | 0 | 1 | 379 | 1 | 379 | 0.0 | 769 |
| MsG0180000520.01.T01 | AT1G07940 | 97.098 | 379 | 11 | 0 | 1 | 379 | 1 | 379 | 0.0 | 769 |
| MsG0180000520.01.T01 | AT1G07930 | 97.098 | 379 | 11 | 0 | 1 | 379 | 1 | 379 | 0.0 | 769 |
| MsG0180000520.01.T01 | AT1G07930 | 98.431 | 255 | 4 | 0 | 1 | 255 | 1 | 255 | 0.0 | 527 |
| MsG0180000520.01.T01 | AT1G07930 | 91.837 | 49 | 4 | 0 | 331 | 379 | 254 | 302 | 1.06e-23 | 101 |
| MsG0180000520.01.T01 | AT5G10630 | 35.714 | 378 | 235 | 5 | 7 | 379 | 239 | 613 | 2.45e-80 | 259 |
| MsG0180000520.01.T01 | AT5G10630 | 35.714 | 378 | 235 | 5 | 7 | 379 | 240 | 614 | 2.50e-80 | 259 |
| MsG0180000520.01.T01 | AT5G10630 | 35.714 | 378 | 235 | 5 | 7 | 379 | 240 | 614 | 2.50e-80 | 259 |
| MsG0180000520.01.T01 | AT1G18070 | 37.037 | 378 | 230 | 5 | 5 | 377 | 99 | 473 | 4.44e-80 | 255 |
| MsG0180000520.01.T01 | AT1G18070 | 37.037 | 378 | 230 | 5 | 5 | 377 | 99 | 473 | 4.44e-80 | 255 |
| MsG0180000520.01.T01 | AT5G10630 | 35.714 | 378 | 235 | 5 | 7 | 379 | 310 | 684 | 1.31e-79 | 259 |
| MsG0180000520.01.T01 | AT5G10630 | 35.714 | 378 | 235 | 5 | 7 | 379 | 315 | 689 | 1.61e-79 | 259 |
| MsG0180000520.01.T01 | AT1G18070 | 36.247 | 389 | 229 | 6 | 5 | 377 | 99 | 484 | 5.56e-77 | 248 |
| MsG0180000520.01.T01 | AT4G02930 | 33.140 | 344 | 187 | 10 | 3 | 336 | 63 | 373 | 4.61e-42 | 153 |
| MsG0180000520.01.T01 | AT4G20360 | 34.472 | 322 | 173 | 7 | 3 | 313 | 75 | 369 | 6.67e-42 | 153 |
| MsG0180000520.01.T01 | AT4G20360 | 34.472 | 322 | 173 | 7 | 3 | 313 | 75 | 369 | 6.67e-42 | 153 |
| MsG0180000520.01.T01 | AT1G35550 | 80.000 | 45 | 9 | 0 | 335 | 379 | 1 | 45 | 8.30e-19 | 81.3 |
| MsG0180000520.01.T01 | AT2G31060 | 24.621 | 264 | 161 | 8 | 9 | 263 | 61 | 295 | 6.57e-12 | 67.4 |
| MsG0180000520.01.T01 | AT5G08650 | 26.766 | 269 | 146 | 10 | 9 | 272 | 88 | 310 | 1.17e-11 | 66.6 |
| MsG0180000520.01.T01 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 1.25e-11 | 66.6 |
| MsG0180000520.01.T02 | AT5G60390 | 96.979 | 331 | 10 | 0 | 1 | 331 | 49 | 379 | 0.0 | 676 |
| MsG0180000520.01.T02 | AT5G60390 | 96.979 | 331 | 10 | 0 | 1 | 331 | 49 | 379 | 0.0 | 676 |
| MsG0180000520.01.T02 | AT5G60390 | 96.979 | 331 | 10 | 0 | 1 | 331 | 49 | 379 | 0.0 | 676 |
| MsG0180000520.01.T02 | AT1G07920 | 96.979 | 331 | 10 | 0 | 1 | 331 | 49 | 379 | 0.0 | 676 |
| MsG0180000520.01.T02 | AT1G07940 | 96.979 | 331 | 10 | 0 | 1 | 331 | 49 | 379 | 0.0 | 676 |
| MsG0180000520.01.T02 | AT1G07940 | 96.979 | 331 | 10 | 0 | 1 | 331 | 49 | 379 | 0.0 | 676 |
| MsG0180000520.01.T02 | AT1G07940 | 96.979 | 331 | 10 | 0 | 1 | 331 | 49 | 379 | 0.0 | 676 |
| MsG0180000520.01.T02 | AT1G07940 | 96.979 | 331 | 10 | 0 | 1 | 331 | 49 | 379 | 0.0 | 676 |
| MsG0180000520.01.T02 | AT1G07930 | 96.979 | 331 | 10 | 0 | 1 | 331 | 49 | 379 | 0.0 | 676 |
| MsG0180000520.01.T02 | AT1G07930 | 98.551 | 207 | 3 | 0 | 1 | 207 | 49 | 255 | 7.34e-153 | 434 |
| MsG0180000520.01.T02 | AT1G07930 | 91.837 | 49 | 4 | 0 | 283 | 331 | 254 | 302 | 4.71e-24 | 101 |
| MsG0180000520.01.T02 | AT5G10630 | 34.731 | 334 | 210 | 5 | 3 | 331 | 283 | 613 | 9.59e-65 | 216 |
| MsG0180000520.01.T02 | AT5G10630 | 34.731 | 334 | 210 | 5 | 3 | 331 | 284 | 614 | 9.75e-65 | 216 |
| MsG0180000520.01.T02 | AT5G10630 | 34.731 | 334 | 210 | 5 | 3 | 331 | 284 | 614 | 9.75e-65 | 216 |
| MsG0180000520.01.T02 | AT5G10630 | 34.731 | 334 | 210 | 5 | 3 | 331 | 354 | 684 | 3.06e-64 | 216 |
| MsG0180000520.01.T02 | AT5G10630 | 34.731 | 334 | 210 | 5 | 3 | 331 | 359 | 689 | 3.45e-64 | 216 |
| MsG0180000520.01.T02 | AT1G18070 | 35.435 | 333 | 207 | 5 | 2 | 329 | 144 | 473 | 2.07e-62 | 207 |
| MsG0180000520.01.T02 | AT1G18070 | 35.435 | 333 | 207 | 5 | 2 | 329 | 144 | 473 | 2.07e-62 | 207 |
| MsG0180000520.01.T02 | AT1G18070 | 34.593 | 344 | 206 | 6 | 2 | 329 | 144 | 484 | 2.11e-59 | 200 |
| MsG0180000520.01.T02 | AT4G02930 | 34.146 | 287 | 161 | 8 | 12 | 288 | 105 | 373 | 4.85e-37 | 138 |
| MsG0180000520.01.T02 | AT4G20360 | 35.472 | 265 | 148 | 6 | 12 | 265 | 117 | 369 | 5.49e-34 | 130 |
| MsG0180000520.01.T02 | AT4G20360 | 35.472 | 265 | 148 | 6 | 12 | 265 | 117 | 369 | 5.49e-34 | 130 |
| MsG0180000520.01.T02 | AT1G35550 | 80.000 | 45 | 9 | 0 | 287 | 331 | 1 | 45 | 4.94e-19 | 81.6 |
| MsG0180000520.01.T04 | AT1G07930 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 2.49e-111 | 321 |
| MsG0180000520.01.T04 | AT5G60390 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 6.08e-111 | 322 |
| MsG0180000520.01.T04 | AT5G60390 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 6.08e-111 | 322 |
| MsG0180000520.01.T04 | AT5G60390 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 6.08e-111 | 322 |
| MsG0180000520.01.T04 | AT1G07920 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 6.08e-111 | 322 |
| MsG0180000520.01.T04 | AT1G07940 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 6.08e-111 | 322 |
| MsG0180000520.01.T04 | AT1G07940 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 6.08e-111 | 322 |
| MsG0180000520.01.T04 | AT1G07940 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 6.08e-111 | 322 |
| MsG0180000520.01.T04 | AT1G07940 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 6.08e-111 | 322 |
| MsG0180000520.01.T04 | AT1G07930 | 98.710 | 155 | 2 | 0 | 1 | 155 | 1 | 155 | 6.08e-111 | 322 |
| MsG0180000520.01.T04 | AT5G10630 | 47.333 | 150 | 78 | 1 | 7 | 155 | 239 | 388 | 7.71e-46 | 158 |
| MsG0180000520.01.T04 | AT5G10630 | 47.333 | 150 | 78 | 1 | 7 | 155 | 240 | 389 | 7.77e-46 | 158 |
| MsG0180000520.01.T04 | AT5G10630 | 47.333 | 150 | 78 | 1 | 7 | 155 | 240 | 389 | 7.77e-46 | 158 |
| MsG0180000520.01.T04 | AT5G10630 | 47.333 | 150 | 78 | 1 | 7 | 155 | 310 | 459 | 8.17e-46 | 159 |
| MsG0180000520.01.T04 | AT5G10630 | 47.333 | 150 | 78 | 1 | 7 | 155 | 315 | 464 | 8.39e-46 | 159 |
| MsG0180000520.01.T04 | AT1G18070 | 44.737 | 152 | 84 | 0 | 4 | 155 | 98 | 249 | 9.40e-43 | 148 |
| MsG0180000520.01.T04 | AT1G18070 | 44.737 | 152 | 84 | 0 | 4 | 155 | 98 | 249 | 9.40e-43 | 148 |
| MsG0180000520.01.T04 | AT1G18070 | 44.737 | 152 | 84 | 0 | 4 | 155 | 98 | 249 | 1.10e-42 | 148 |
| MsG0180000520.01.T04 | AT4G20360 | 36.842 | 152 | 74 | 2 | 3 | 154 | 75 | 204 | 2.98e-26 | 103 |
| MsG0180000520.01.T04 | AT4G20360 | 36.842 | 152 | 74 | 2 | 3 | 154 | 75 | 204 | 2.98e-26 | 103 |
| MsG0180000520.01.T04 | AT4G02930 | 36.601 | 153 | 75 | 3 | 3 | 155 | 63 | 193 | 1.08e-24 | 99.0 |
Find 36 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1:+7345566 | MsG0180000520.01.T01:CDS |
| TTCATTAAGAACATGATTAC+TGG | 0.308905 | 1:+7345449 | MsG0180000520.01.T01:CDS |
| CACATTAACATTGTTGTCAT+TGG | 0.329838 | 1:+7345176 | MsG0180000520.01.T01:CDS |
| GTCATTGGCCATGTCGACTC+TGG | 0.395247 | 1:+7345191 | MsG0180000520.01.T01:CDS |
| AGGACAAATGGGTAAGGAAA+AGG | 0.440646 | 1:+7345151 | None:intergenic |
| CTTAATGAAATCCCTATGTC+CGG | 0.451972 | 1:-7345435 | None:intergenic |
| AGCTTCAAAACCACCGGTAG+TGG | 0.453289 | 1:-7345510 | None:intergenic |
| AGCGTTCATTCAAGTATGCT+TGG | 0.463969 | 1:+7345309 | MsG0180000520.01.T01:CDS |
| CTGATCATTGATTCCACTAC+CGG | 0.486115 | 1:+7345497 | MsG0180000520.01.T01:CDS |
| GCGTTCATTCAAGTATGCTT+GGG | 0.490294 | 1:+7345310 | MsG0180000520.01.T01:CDS |
| CAGAACAGCACAATCAGCTT+GGG | 0.510396 | 1:-7345477 | None:intergenic |
| TTAATGAAATCCCTATGTCC+GGG | 0.515722 | 1:-7345434 | None:intergenic |
| GAAGCTGGTATTTCAAAGGA+TGG | 0.516473 | 1:+7345527 | MsG0180000520.01.T01:CDS |
| TCAGAACAGCACAATCAGCT+TGG | 0.519259 | 1:-7345478 | None:intergenic |
| CTCAAAGCTGAACGTGAAAG+AGG | 0.531334 | 1:+7345344 | MsG0180000520.01.T01:CDS |
| TCATTGGCCATGTCGACTCT+GGG | 0.536467 | 1:+7345192 | MsG0180000520.01.T01:CDS |
| TGCACTGTCATCGATGCCCC+CGG | 0.544770 | 1:+7345416 | MsG0180000520.01.T01:CDS |
| CACTTGATCTACAAGCTTGG+AGG | 0.548237 | 1:+7345233 | MsG0180000520.01.T01:CDS |
| TTGATAAGCGTGTGATTGAG+AGG | 0.552905 | 1:+7345258 | MsG0180000520.01.T01:CDS |
| AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1:-7345556 | None:intergenic |
| GGTCACTTGATCTACAAGCT+TGG | 0.563562 | 1:+7345230 | MsG0180000520.01.T01:CDS |
| AAGCTGGTATTTCAAAGGAT+GGG | 0.564820 | 1:+7345528 | MsG0180000520.01.T01:CDS |
| TCTGGGAAGTCAACCACCAC+CGG | 0.571267 | 1:+7345209 | MsG0180000520.01.T01:CDS |
| AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1:-7345555 | None:intergenic |
| GTAGATCAAGTGACCGGTGG+TGG | 0.594900 | 1:-7345222 | None:intergenic |
| TTGACTTCCCAGAGTCGACA+TGG | 0.602118 | 1:-7345199 | None:intergenic |
| TAATGAAATCCCTATGTCCG+GGG | 0.614881 | 1:-7345433 | None:intergenic |
| GTTCAGCTTTGAGCTTGTCG+AGG | 0.615570 | 1:-7345334 | None:intergenic |
| ATCATTGATTCCACTACCGG+TGG | 0.618310 | 1:+7345500 | MsG0180000520.01.T01:CDS |
| TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1:-7345571 | None:intergenic |
| AAGCTTGTAGATCAAGTGAC+CGG | 0.624860 | 1:-7345228 | None:intergenic |
| AATGATTTGTTGCTGCAACA+AGG | 0.628678 | 1:+7345598 | MsG0180000520.01.T01:CDS |
| AATACCAGCTTCAAAACCAC+CGG | 0.642728 | 1:-7345516 | None:intergenic |
| AATGAAATCCCTATGTCCGG+GGG | 0.681259 | 1:-7345432 | None:intergenic |
| CTTGTAGATCAAGTGACCGG+TGG | 0.685001 | 1:-7345225 | None:intergenic |
| TCACAATTGACATTGCTCTG+TGG | 0.708352 | 1:+7345369 | MsG0180000520.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTCATTAAGAACATGATTAC+TGG | + | Chr1:7345449-7345468 | MsG0180000520.01.T01:CDS | 25.0% |
| AGTTTCATCCTATTTGAAGA+AGG | + | Chr1:7345770-7345789 | MsG0180000520.01.T01:CDS | 30.0% | |
| CACATTAACATTGTTGTCAT+TGG | + | Chr1:7345176-7345195 | MsG0180000520.01.T01:CDS | 30.0% | |
| TAGGTATGAAGAAATTGTGA+AGG | + | Chr1:7345746-7345765 | MsG0180000520.01.T01:CDS | 30.0% | |
| !!! | TTTTGAAGCTGGTATTTCAA+AGG | + | Chr1:7345523-7345542 | MsG0180000520.01.T01:CDS | 30.0% |
| AAGCTGGTATTTCAAAGGAT+GGG | + | Chr1:7345528-7345547 | MsG0180000520.01.T01:CDS | 35.0% | |
| ACAAATCTTGACTGGTACAA+GGG | + | Chr1:7345867-7345886 | MsG0180000520.01.T01:CDS | 35.0% | |
| AGCAAATTTGACAGCAATGT+GGG | - | Chr1:7346315-7346334 | None:intergenic | 35.0% | |
| ATAATCAGATGCACCTTCAA+AGG | - | Chr1:7345641-7345660 | None:intergenic | 35.0% | |
| ATAGCCAACCTTCTTCAAAT+AGG | - | Chr1:7345781-7345800 | None:intergenic | 35.0% | |
| ATTAAATCCCACATTGTCAC+CGG | - | Chr1:7346129-7346148 | None:intergenic | 35.0% | |
| CTTAATGAAATCCCTATGTC+CGG | - | Chr1:7345438-7345457 | None:intergenic | 35.0% | |
| TAATCAGATGCACCTTCAAA+GGG | - | Chr1:7345640-7345659 | None:intergenic | 35.0% | |
| TACAAATCTTGACTGGTACA+AGG | + | Chr1:7345866-7345885 | MsG0180000520.01.T01:CDS | 35.0% | |
| TCATCCTATTTGAAGAAGGT+TGG | + | Chr1:7345774-7345793 | MsG0180000520.01.T01:CDS | 35.0% | |
| TCTACAAGATTGGAGGAATT+GGG | + | Chr1:7345973-7345992 | MsG0180000520.01.T01:CDS | 35.0% | |
| TTAATGAAATCCCTATGTCC+GGG | - | Chr1:7345437-7345456 | None:intergenic | 35.0% | |
| ! | GAACAAACGGAATTTTGTCT+GGG | - | Chr1:7345806-7345825 | None:intergenic | 35.0% |
| ! | TGTTAAGAACGTTGCTGTTA+AGG | + | Chr1:7346148-7346167 | MsG0180000520.01.T01:CDS | 35.0% |
| !! | AATGATTTGTTGCTGCAACA+AGG | + | Chr1:7345598-7345617 | MsG0180000520.01.T01:CDS | 35.0% |
| !! | AGCTTGTTACTAAGATTGAC+AGG | + | Chr1:7346336-7346355 | MsG0180000520.01.T01:CDS | 35.0% |
| !! | TTAACGTTTTAGCCCTTTGA+AGG | + | Chr1:7345625-7345644 | MsG0180000520.01.T01:intron | 35.0% |
| AAACCAGAGATGGGAACAAA+CGG | - | Chr1:7345819-7345838 | None:intergenic | 40.0% | |
| AAATTTGACAGCAATGTGGG+AGG | - | Chr1:7346312-7346331 | None:intergenic | 40.0% | |
| AAGCTTGTAGATCAAGTGAC+CGG | - | Chr1:7345231-7345250 | None:intergenic | 40.0% | |
| AATACCAGCTTCAAAACCAC+CGG | - | Chr1:7345519-7345538 | None:intergenic | 40.0% | |
| AGCGTTCATTCAAGTATGCT+TGG | + | Chr1:7345309-7345328 | MsG0180000520.01.T01:CDS | 40.0% | |
| AGTGATCATCATGAATCACC+CGG | + | Chr1:7346244-7346263 | MsG0180000520.01.T01:CDS | 40.0% | |
| ATCTTGTAGACATCCTGAAG+TGG | - | Chr1:7345963-7345982 | None:intergenic | 40.0% | |
| CAGCAAATTTGACAGCAATG+TGG | - | Chr1:7346316-7346335 | None:intergenic | 40.0% | |
| CTTCAGGATGTCTACAAGAT+TGG | + | Chr1:7345963-7345982 | MsG0180000520.01.T01:CDS | 40.0% | |
| GAAGCTGGTATTTCAAAGGA+TGG | + | Chr1:7345527-7345546 | MsG0180000520.01.T01:CDS | 40.0% | |
| GCGTTCATTCAAGTATGCTT+GGG | + | Chr1:7345310-7345329 | MsG0180000520.01.T01:CDS | 40.0% | |
| GTCTACAAGATTGGAGGAAT+TGG | + | Chr1:7345972-7345991 | MsG0180000520.01.T01:CDS | 40.0% | |
| TAATGAAATCCCTATGTCCG+GGG | - | Chr1:7345436-7345455 | None:intergenic | 40.0% | |
| TCACAATTGACATTGCTCTG+TGG | + | Chr1:7345369-7345388 | MsG0180000520.01.T01:CDS | 40.0% | |
| TTAAATCCCACATTGTCACC+GGG | - | Chr1:7346128-7346147 | None:intergenic | 40.0% | |
| TTATGTTGCCTCAAACTCCA+AGG | + | Chr1:7346184-7346203 | MsG0180000520.01.T01:CDS | 40.0% | |
| TTGATAAGCGTGTGATTGAG+AGG | + | Chr1:7345258-7345277 | MsG0180000520.01.T01:CDS | 40.0% | |
| ! | ATACCTACCTTTCGAGTACT+TGG | - | Chr1:7345733-7345752 | None:intergenic | 40.0% |
| ! | GGAACAAACGGAATTTTGTC+TGG | - | Chr1:7345807-7345826 | None:intergenic | 40.0% |
| ! | TACCTACCTTTCGAGTACTT+GGG | - | Chr1:7345732-7345751 | None:intergenic | 40.0% |
| ! | TTCTGGAAAGGAGATTGAGA+AGG | + | Chr1:7346361-7346380 | MsG0180000520.01.T01:CDS | 40.0% |
| !! | CTGATCATTGATTCCACTAC+CGG | + | Chr1:7345497-7345516 | MsG0180000520.01.T01:CDS | 40.0% |
| !! | TGGTGTCATAAAACCTGGAA+TGG | + | Chr1:7346022-7346041 | MsG0180000520.01.T01:CDS | 40.0% |
| AATGAAATCCCTATGTCCGG+GGG | - | Chr1:7345435-7345454 | None:intergenic | 45.0% | |
| ACCAAATCAACGAGCCTAAG+AGG | + | Chr1:7345913-7345932 | MsG0180000520.01.T01:CDS | 45.0% | |
| ACTAAGATTGACAGGCGTTC+TGG | + | Chr1:7346344-7346363 | MsG0180000520.01.T01:CDS | 45.0% | |
| ACTACACCCAAGTACTCGAA+AGG | + | Chr1:7345723-7345742 | MsG0180000520.01.T01:CDS | 45.0% | |
| ACTTCAGTTGTCAGTCCAGT+AGG | - | Chr1:7346062-7346081 | None:intergenic | 45.0% | |
| AGACATCCTGAAGTGGTAGT+CGG | - | Chr1:7345956-7345975 | None:intergenic | 45.0% | |
| AGCGCTCTACAAATCTTGAC+TGG | + | Chr1:7345859-7345878 | MsG0180000520.01.T01:CDS | 45.0% | |
| ATCTCCCTCAAAACCAGAGA+TGG | - | Chr1:7345829-7345848 | None:intergenic | 45.0% | |
| ATTCCGTTTGTTCCCATCTC+TGG | + | Chr1:7345813-7345832 | MsG0180000520.01.T01:CDS | 45.0% | |
| CACTTGATCTACAAGCTTGG+AGG | + | Chr1:7345233-7345252 | MsG0180000520.01.T01:CDS | 45.0% | |
| CAGAACAGCACAATCAGCTT+GGG | - | Chr1:7345480-7345499 | None:intergenic | 45.0% | |
| CAGGATGTCTACAAGATTGG+AGG | + | Chr1:7345966-7345985 | MsG0180000520.01.T01:CDS | 45.0% | |
| CTCAAAGCTGAACGTGAAAG+AGG | + | Chr1:7345344-7345363 | MsG0180000520.01.T01:CDS | 45.0% | |
| CTTCAGTTGTCAGTCCAGTA+GGG | - | Chr1:7346061-7346080 | None:intergenic | 45.0% | |
| GACAACTGAAGTGAAGTCTG+TGG | + | Chr1:7346070-7346089 | MsG0180000520.01.T01:CDS | 45.0% | |
| GCAAAAGTGACAACCATTCC+AGG | - | Chr1:7346038-7346057 | None:intergenic | 45.0% | |
| GGTCACTTGATCTACAAGCT+TGG | + | Chr1:7345230-7345249 | MsG0180000520.01.T01:CDS | 45.0% | |
| GTGATCATCATGAATCACCC+GGG | + | Chr1:7346245-7346264 | MsG0180000520.01.T01:CDS | 45.0% | |
| TCACACCAAGAGTGAAAGCA+AGG | - | Chr1:7345574-7345593 | None:intergenic | 45.0% | |
| TCAGAACAGCACAATCAGCT+TGG | - | Chr1:7345481-7345500 | None:intergenic | 45.0% | |
| TCTCCCTCAAAACCAGAGAT+GGG | - | Chr1:7345828-7345847 | None:intergenic | 45.0% | |
| TGTAAAGTTAGCAGCCTCCT+TGG | - | Chr1:7346219-7346238 | None:intergenic | 45.0% | |
| TTCAGTTGTCAGTCCAGTAG+GGG | - | Chr1:7346060-7346079 | None:intergenic | 45.0% | |
| TTGGTCAAGAGCCTCAAGAA+GGG | - | Chr1:7345898-7345917 | None:intergenic | 45.0% | |
| TTTGGTCAAGAGCCTCAAGA+AGG | - | Chr1:7345899-7345918 | None:intergenic | 45.0% | |
| ! | AAGCAAGGAGAGCATGTTCA+CGG | - | Chr1:7345559-7345578 | None:intergenic | 45.0% |
| ! | GTCTTGCTATCGTGAACAGA+TGG | + | Chr1:7345695-7345714 | MsG0180000520.01.T01:intron | 45.0% |
| ! | TTTCGAGTACTTGGGTGTAG+TGG | - | Chr1:7345724-7345743 | None:intergenic | 45.0% |
| !! | ATCATTGATTCCACTACCGG+TGG | + | Chr1:7345500-7345519 | MsG0180000520.01.T01:CDS | 45.0% |
| !! | GAGACTGGTGTCATAAAACC+TGG | + | Chr1:7346017-7346036 | MsG0180000520.01.T01:CDS | 45.0% |
| !!! | GTTCCCATCTCTGGTTTTGA+GGG | + | Chr1:7345822-7345841 | MsG0180000520.01.T01:CDS | 45.0% |
| !!! | TGTTCCCATCTCTGGTTTTG+AGG | + | Chr1:7345821-7345840 | MsG0180000520.01.T01:CDS | 45.0% |
| AGCTTCAAAACCACCGGTAG+TGG | - | Chr1:7345513-7345532 | None:intergenic | 50.0% | |
| AGGGTCATCCTTGGAGTTTG+AGG | - | Chr1:7346195-7346214 | None:intergenic | 50.0% | |
| AGGTGTGGCAGTCAAGAACA+GGG | - | Chr1:7346292-7346311 | None:intergenic | 50.0% | |
| ATCCTGAAGTGGTAGTCGGA+GGG | - | Chr1:7345952-7345971 | None:intergenic | 50.0% | |
| CACCCAAGTACTCGAAAGGT+AGG | + | Chr1:7345727-7345746 | MsG0180000520.01.T01:CDS | 50.0% | |
| CTTGTAGATCAAGTGACCGG+TGG | - | Chr1:7345228-7345247 | None:intergenic | 50.0% | |
| GCATCATGAAGCTCTCACTG+AGG | + | Chr1:7346097-7346116 | MsG0180000520.01.T01:CDS | 50.0% | |
| GCTCTCCTTGCTTTCACTCT+TGG | + | Chr1:7345566-7345585 | MsG0180000520.01.T01:CDS | 50.0% | |
| GCTGTTAAGGATCTCAAGCG+TGG | + | Chr1:7346161-7346180 | MsG0180000520.01.T01:CDS | 50.0% | |
| GGGCATAGCCATTTCCAATC+TGG | - | Chr1:7346271-7346290 | None:intergenic | 50.0% | |
| TAGCCATTTCCAATCTGGCC+CGG | - | Chr1:7346266-7346285 | None:intergenic | 50.0% | |
| TCAAGAGCCTCAAGAAGGGT+TGG | - | Chr1:7345894-7345913 | None:intergenic | 50.0% | |
| TTGACTTCCCAGAGTCGACA+TGG | - | Chr1:7345202-7345221 | None:intergenic | 50.0% | |
| ! | AGCAAGGAGAGCATGTTCAC+GGG | - | Chr1:7345558-7345577 | None:intergenic | 50.0% |
| ! | GCCTCTTAGGCTCGTTGATT+TGG | - | Chr1:7345917-7345936 | None:intergenic | 50.0% |
| !! | GATTGACAGGCGTTCTGGAA+AGG | + | Chr1:7346349-7346368 | MsG0180000520.01.T01:CDS | 50.0% |
| !! | GTTCAGCTTTGAGCTTGTCG+AGG | - | Chr1:7345337-7345356 | None:intergenic | 50.0% |
| !! | TCATTGGCCATGTCGACTCT+GGG | + | Chr1:7345192-7345211 | MsG0180000520.01.T01:CDS | 50.0% |
| !!! | ACTACCGGTGGTTTTGAAGC+TGG | + | Chr1:7345512-7345531 | MsG0180000520.01.T01:CDS | 50.0% |
| !!! | GTTGTCACTTTTGCCCCTAC+TGG | + | Chr1:7346044-7346063 | MsG0180000520.01.T01:CDS | 50.0% |
| AAGTTAGCAGCCTCCTTGGC+AGG | - | Chr1:7346215-7346234 | None:intergenic | 55.0% | |
| AGCCATTTCCAATCTGGCCC+GGG | - | Chr1:7346265-7346284 | None:intergenic | 55.0% | |
| AGGAATTGGGACTGTGCCTG+TGG | + | Chr1:7345986-7346005 | MsG0180000520.01.T01:CDS | 55.0% | |
| AGTTAGCAGCCTCCTTGGCA+GGG | - | Chr1:7346214-7346233 | None:intergenic | 55.0% | |
| ATGAATCACCCGGGCCAGAT+TGG | + | Chr1:7346254-7346273 | MsG0180000520.01.T01:CDS | 55.0% | |
| CAAGGGTCCAACCCTTCTTG+AGG | + | Chr1:7345884-7345903 | MsG0180000520.01.T01:CDS | 55.0% | |
| CATCCTGAAGTGGTAGTCGG+AGG | - | Chr1:7345953-7345972 | None:intergenic | 55.0% | |
| GAATTGGGACTGTGCCTGTG+GGG | + | Chr1:7345988-7346007 | MsG0180000520.01.T01:CDS | 55.0% | |
| GAGGTGTGGCAGTCAAGAAC+AGG | - | Chr1:7346293-7346312 | None:intergenic | 55.0% | |
| GCTCTTCCCGGTGACAATGT+GGG | + | Chr1:7346119-7346138 | MsG0180000520.01.T01:CDS | 55.0% | |
| GGAATTGGGACTGTGCCTGT+GGG | + | Chr1:7345987-7346006 | MsG0180000520.01.T01:CDS | 55.0% | |
| GGTGTGGCAGTCAAGAACAG+GGG | - | Chr1:7346291-7346310 | None:intergenic | 55.0% | |
| GTAGATCAAGTGACCGGTGG+TGG | - | Chr1:7345225-7345244 | None:intergenic | 55.0% | |
| TCCTGAAGTGGTAGTCGGAG+GGG | - | Chr1:7345951-7345970 | None:intergenic | 55.0% | |
| TCTGGGAAGTCAACCACCAC+CGG | + | Chr1:7345209-7345228 | MsG0180000520.01.T01:CDS | 55.0% | |
| TGACAGCAATGTGGGAGGTG+TGG | - | Chr1:7346307-7346326 | None:intergenic | 55.0% | |
| !! | GTCATTGGCCATGTCGACTC+TGG | + | Chr1:7345191-7345210 | MsG0180000520.01.T01:CDS | 55.0% |
| CAAGGATGACCCTGCCAAGG+AGG | + | Chr1:7346202-7346221 | MsG0180000520.01.T01:CDS | 60.0% | |
| CACCCGGGCCAGATTGGAAA+TGG | + | Chr1:7346260-7346279 | MsG0180000520.01.T01:CDS | 60.0% | |
| CATCGATGCCCCCGGACATA+GGG | + | Chr1:7345424-7345443 | MsG0180000520.01.T01:CDS | 60.0% | |
| CTCCAAGGATGACCCTGCCA+AGG | + | Chr1:7346199-7346218 | MsG0180000520.01.T01:CDS | 60.0% | |
| CTCCTTGGCAGGGTCATCCT+TGG | - | Chr1:7346204-7346223 | None:intergenic | 60.0% | |
| GCTCTCACTGAGGCTCTTCC+CGG | + | Chr1:7346107-7346126 | MsG0180000520.01.T01:CDS | 60.0% | |
| GGCTCTTCCCGGTGACAATG+TGG | + | Chr1:7346118-7346137 | MsG0180000520.01.T01:CDS | 60.0% | |
| TCATCGATGCCCCCGGACAT+AGG | + | Chr1:7345423-7345442 | MsG0180000520.01.T01:CDS | 60.0% | |
| TGCACTGTCATCGATGCCCC+CGG | + | Chr1:7345416-7345435 | MsG0180000520.01.T01:CDS | 60.0% | |
| TGGTAGTCGGAGGGGCTTGT+CGG | - | Chr1:7345943-7345962 | None:intergenic | 60.0% | |
| AGTCGGAGGGGCTTGTCGGA+GGG | - | Chr1:7345939-7345958 | None:intergenic | 65.0% | |
| GCCCCTCCGACTACCACTTC+AGG | + | Chr1:7345947-7345966 | MsG0180000520.01.T01:CDS | 65.0% | |
| GGCTTGTCGGAGGGCCTCTT+AGG | - | Chr1:7345930-7345949 | None:intergenic | 65.0% | |
| TAGTCGGAGGGGCTTGTCGG+AGG | - | Chr1:7345940-7345959 | None:intergenic | 65.0% | |
| CCAGTCTCGACACGCCCCAC+AGG | - | Chr1:7346005-7346024 | None:intergenic | 70.0% | |
| CCTGTGGGGCGTGTCGAGAC+TGG | + | Chr1:7346002-7346021 | MsG0180000520.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 7345158 | 7346397 | 7345158 | ID=MsG0180000520.01;Name=MsG0180000520.01 |
| Chr1 | mRNA | 7345158 | 7346397 | 7345158 | ID=MsG0180000520.01.T01;Parent=MsG0180000520.01;Name=MsG0180000520.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|381 |
| Chr1 | exon | 7345158 | 7345619 | 7345158 | ID=MsG0180000520.01.T01:exon:27745;Parent=MsG0180000520.01.T01 |
| Chr1 | CDS | 7345158 | 7345619 | 7345158 | ID=MsG0180000520.01.T01:cds;Parent=MsG0180000520.01.T01 |
| Chr1 | CDS | 7345714 | 7346397 | 7345714 | ID=MsG0180000520.01.T01:cds;Parent=MsG0180000520.01.T01 |
| Chr1 | mRNA | 7345302 | 7346397 | 7345302 | ID=MsG0180000520.01.T02;Parent=MsG0180000520.01;Name=MsG0180000520.01.T02;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|0.5|2|0|333 |
| Chr1 | exon | 7345302 | 7345619 | 7345302 | ID=MsG0180000520.01.T02:exon:27747;Parent=MsG0180000520.01.T02 |
| Chr1 | CDS | 7345302 | 7345619 | 7345302 | ID=MsG0180000520.01.T02:cds;Parent=MsG0180000520.01.T02 |
| Chr1 | CDS | 7345714 | 7346397 | 7345714 | ID=MsG0180000520.01.T02:cds;Parent=MsG0180000520.01.T02 |
| Chr1 | mRNA | 7345461 | 7346397 | 7345461 | ID=MsG0180000520.01.T03;Parent=MsG0180000520.01;Name=MsG0180000520.01.T03;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|0.5|2|0|280 |
| Chr1 | exon | 7345461 | 7345619 | 7345461 | ID=MsG0180000520.01.T03:exon:27748;Parent=MsG0180000520.01.T03 |
| Chr1 | CDS | 7345461 | 7345619 | 7345461 | ID=MsG0180000520.01.T03:cds;Parent=MsG0180000520.01.T03 |
| Chr1 | CDS | 7345714 | 7346397 | 7345714 | ID=MsG0180000520.01.T03:cds;Parent=MsG0180000520.01.T03 |
| Chr1 | mRNA | 7345158 | 7345628 | 7345158 | ID=MsG0180000520.01.T04;Parent=MsG0180000520.01;Name=MsG0180000520.01.T04;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|156 |
| Chr1 | exon | 7345158 | 7345628 | 7345158 | ID=MsG0180000520.01.T04:exon:27749;Parent=MsG0180000520.01.T04 |
| Chr1 | CDS | 7345158 | 7345628 | 7345158 | ID=MsG0180000520.01.T04:cds;Parent=MsG0180000520.01.T04 |
| Gene Sequence |
| Protein sequence |
