Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007139.01.T01 | XP_003594095.2 | 99.229 | 389 | 3 | 0 | 1 | 389 | 48 | 436 | 0 | 787 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007139.01.T01 | Q9ZT91 | 85.641 | 390 | 55 | 1 | 1 | 389 | 65 | 454 | 0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007139.01.T01 | G7IKE0 | 99.229 | 389 | 3 | 0 | 1 | 389 | 48 | 436 | 0.0 | 787 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007139.01.T01 | MTR_2g021300 | 99.229 | 389 | 3 | 0 | 1 | 389 | 48 | 436 | 0.0 | 787 |
| MsG0280007139.01.T01 | MTR_7g094460 | 84.319 | 389 | 61 | 0 | 1 | 389 | 61 | 449 | 0.0 | 659 |
| MsG0280007139.01.T01 | MTR_3g076660 | 62.531 | 403 | 132 | 4 | 1 | 388 | 90 | 488 | 1.10e-163 | 468 |
| MsG0280007139.01.T01 | MTR_3g072130 | 73.820 | 233 | 38 | 3 | 158 | 389 | 101 | 311 | 1.02e-107 | 319 |
| MsG0280007139.01.T01 | MTR_3g072130 | 81.132 | 53 | 10 | 0 | 8 | 60 | 49 | 101 | 1.93e-14 | 73.9 |
| MsG0280007139.01.T01 | MTR_4g014810 | 29.519 | 437 | 246 | 12 | 1 | 387 | 5 | 429 | 3.11e-42 | 154 |
| MsG0280007139.01.T01 | MTR_1g495705 | 29.519 | 437 | 246 | 12 | 1 | 387 | 5 | 429 | 3.58e-41 | 151 |
| MsG0280007139.01.T01 | MTR_1g095650 | 29.519 | 437 | 246 | 12 | 1 | 387 | 5 | 429 | 3.58e-41 | 151 |
| MsG0280007139.01.T01 | MTR_1g095703 | 29.291 | 437 | 247 | 12 | 1 | 387 | 5 | 429 | 5.50e-41 | 150 |
| MsG0280007139.01.T01 | MTR_6g021800 | 29.291 | 437 | 247 | 12 | 1 | 387 | 5 | 429 | 5.75e-41 | 150 |
| MsG0280007139.01.T01 | MTR_6g021805 | 29.291 | 437 | 247 | 12 | 1 | 387 | 5 | 429 | 5.75e-41 | 150 |
| MsG0280007139.01.T01 | MTR_1g085410 | 34.277 | 318 | 173 | 8 | 1 | 289 | 5 | 315 | 3.73e-39 | 145 |
| MsG0280007139.01.T01 | MTR_1g013680 | 29.252 | 441 | 245 | 14 | 1 | 387 | 5 | 432 | 4.58e-36 | 137 |
| MsG0280007139.01.T01 | MTR_1g101870 | 27.945 | 433 | 253 | 13 | 1 | 387 | 5 | 424 | 1.53e-32 | 130 |
| MsG0280007139.01.T01 | MTR_8g087950 | 29.464 | 336 | 201 | 8 | 3 | 307 | 275 | 605 | 2.11e-32 | 129 |
| MsG0280007139.01.T01 | MTR_1g101870 | 28.111 | 434 | 251 | 14 | 1 | 387 | 5 | 424 | 2.15e-32 | 129 |
| MsG0280007139.01.T01 | MTR_8g087950 | 29.464 | 336 | 201 | 8 | 3 | 307 | 348 | 678 | 2.26e-32 | 129 |
| MsG0280007139.01.T01 | MTR_1g024175 | 26.279 | 430 | 263 | 11 | 4 | 387 | 8 | 429 | 3.27e-31 | 124 |
| MsG0280007139.01.T01 | MTR_2g082730 | 31.546 | 317 | 170 | 10 | 1 | 289 | 5 | 302 | 5.38e-30 | 121 |
| MsG0280007139.01.T01 | MTR_8g014590 | 27.928 | 444 | 240 | 15 | 4 | 387 | 8 | 431 | 2.46e-29 | 118 |
| MsG0280007139.01.T01 | MTR_8g008740 | 28.990 | 307 | 186 | 6 | 10 | 289 | 15 | 316 | 4.08e-29 | 118 |
| MsG0280007139.01.T01 | MTR_8g106700 | 29.275 | 345 | 192 | 13 | 1 | 307 | 44 | 374 | 2.06e-27 | 113 |
| MsG0280007139.01.T01 | MTR_8g106700 | 29.275 | 345 | 192 | 13 | 1 | 307 | 50 | 380 | 2.63e-27 | 113 |
| MsG0280007139.01.T01 | MTR_8g106700 | 29.275 | 345 | 192 | 13 | 1 | 307 | 71 | 401 | 3.23e-27 | 113 |
| MsG0280007139.01.T01 | MTR_6g080420 | 30.029 | 343 | 192 | 14 | 1 | 307 | 89 | 419 | 3.32e-27 | 113 |
| MsG0280007139.01.T01 | MTR_5g037350 | 30.916 | 262 | 162 | 6 | 41 | 289 | 107 | 362 | 3.49e-26 | 110 |
| MsG0280007139.01.T01 | MTR_2g037420 | 28.146 | 302 | 170 | 7 | 1 | 287 | 5 | 274 | 3.63e-23 | 100 |
| MsG0280007139.01.T01 | MTR_1g095650 | 27.941 | 340 | 198 | 11 | 83 | 387 | 1 | 328 | 3.83e-23 | 99.8 |
| MsG0280007139.01.T01 | MTR_2g082665 | 29.524 | 315 | 153 | 11 | 1 | 289 | 5 | 276 | 1.20e-21 | 97.1 |
| MsG0280007139.01.T01 | MTR_2g080210 | 27.653 | 311 | 167 | 9 | 1 | 287 | 7 | 283 | 5.69e-21 | 94.4 |
| MsG0280007139.01.T01 | MTR_1g089520 | 26.230 | 427 | 257 | 13 | 1 | 387 | 6 | 414 | 8.96e-21 | 94.4 |
| MsG0280007139.01.T01 | MTR_4g079360 | 28.926 | 242 | 154 | 7 | 5 | 236 | 59 | 292 | 5.91e-18 | 86.3 |
| MsG0280007139.01.T01 | MTR_1g101880 | 32.667 | 150 | 73 | 4 | 4 | 128 | 8 | 154 | 1.89e-16 | 79.0 |
| MsG0280007139.01.T01 | MTR_8g013910 | 24.924 | 329 | 190 | 10 | 1 | 291 | 5 | 314 | 3.44e-15 | 77.0 |
| MsG0280007139.01.T01 | MTR_2g075870 | 24.831 | 443 | 243 | 17 | 4 | 382 | 33 | 449 | 6.04e-15 | 76.6 |
| MsG0280007139.01.T01 | MTR_2g069440 | 24.523 | 367 | 199 | 14 | 4 | 314 | 210 | 554 | 9.25e-15 | 76.3 |
| MsG0280007139.01.T01 | MTR_2g069440 | 24.523 | 367 | 199 | 14 | 4 | 314 | 33 | 377 | 1.16e-14 | 75.5 |
| MsG0280007139.01.T01 | MTR_1g024165 | 33.094 | 139 | 69 | 4 | 4 | 119 | 12 | 149 | 5.40e-13 | 66.6 |
| MsG0280007139.01.T01 | MTR_3g097250 | 27.386 | 241 | 150 | 8 | 5 | 240 | 85 | 305 | 5.19e-12 | 67.8 |
| MsG0280007139.01.T01 | MTR_1g052535 | 25.847 | 236 | 172 | 3 | 5 | 239 | 84 | 317 | 6.82e-12 | 67.0 |
| MsG0280007139.01.T01 | MTR_1g052535 | 25.847 | 236 | 172 | 3 | 5 | 239 | 84 | 317 | 7.00e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007139.01.T01 | AT4G02930 | 85.641 | 390 | 55 | 1 | 1 | 389 | 65 | 454 | 0.0 | 661 |
| MsG0280007139.01.T01 | AT4G20360 | 63.275 | 403 | 129 | 4 | 1 | 388 | 77 | 475 | 5.17e-170 | 484 |
| MsG0280007139.01.T01 | AT4G20360 | 63.275 | 403 | 129 | 4 | 1 | 388 | 77 | 475 | 5.17e-170 | 484 |
| MsG0280007139.01.T01 | AT5G60390 | 29.398 | 432 | 253 | 11 | 1 | 387 | 5 | 429 | 2.53e-41 | 151 |
| MsG0280007139.01.T01 | AT5G60390 | 29.398 | 432 | 253 | 11 | 1 | 387 | 5 | 429 | 2.53e-41 | 151 |
| MsG0280007139.01.T01 | AT5G60390 | 29.398 | 432 | 253 | 11 | 1 | 387 | 5 | 429 | 2.53e-41 | 151 |
| MsG0280007139.01.T01 | AT1G07920 | 29.398 | 432 | 253 | 11 | 1 | 387 | 5 | 429 | 2.53e-41 | 151 |
| MsG0280007139.01.T01 | AT1G07940 | 29.398 | 432 | 253 | 11 | 1 | 387 | 5 | 429 | 2.53e-41 | 151 |
| MsG0280007139.01.T01 | AT1G07940 | 29.398 | 432 | 253 | 11 | 1 | 387 | 5 | 429 | 2.53e-41 | 151 |
| MsG0280007139.01.T01 | AT1G07940 | 29.398 | 432 | 253 | 11 | 1 | 387 | 5 | 429 | 2.53e-41 | 151 |
| MsG0280007139.01.T01 | AT1G07940 | 29.398 | 432 | 253 | 11 | 1 | 387 | 5 | 429 | 2.53e-41 | 151 |
| MsG0280007139.01.T01 | AT1G07930 | 29.398 | 432 | 253 | 11 | 1 | 387 | 5 | 429 | 2.53e-41 | 151 |
| MsG0280007139.01.T01 | AT1G07930 | 33.858 | 254 | 136 | 6 | 1 | 225 | 5 | 255 | 9.06e-33 | 126 |
| MsG0280007139.01.T01 | AT5G10630 | 29.154 | 319 | 191 | 8 | 3 | 291 | 239 | 552 | 3.19e-32 | 128 |
| MsG0280007139.01.T01 | AT5G10630 | 29.154 | 319 | 191 | 8 | 3 | 291 | 240 | 553 | 3.20e-32 | 128 |
| MsG0280007139.01.T01 | AT5G10630 | 29.154 | 319 | 191 | 8 | 3 | 291 | 240 | 553 | 3.20e-32 | 128 |
| MsG0280007139.01.T01 | AT5G10630 | 29.154 | 319 | 191 | 8 | 3 | 291 | 315 | 628 | 3.78e-32 | 128 |
| MsG0280007139.01.T01 | AT5G10630 | 29.154 | 319 | 191 | 8 | 3 | 291 | 310 | 623 | 4.20e-32 | 128 |
| MsG0280007139.01.T01 | AT1G18070 | 25.771 | 454 | 247 | 16 | 1 | 389 | 99 | 527 | 1.80e-27 | 114 |
| MsG0280007139.01.T01 | AT1G18070 | 25.771 | 454 | 247 | 16 | 1 | 389 | 99 | 527 | 1.80e-27 | 114 |
| MsG0280007139.01.T01 | AT1G18070 | 25.161 | 465 | 247 | 17 | 1 | 389 | 99 | 538 | 1.27e-24 | 105 |
| MsG0280007139.01.T01 | AT2G18720 | 26.062 | 353 | 199 | 12 | 4 | 309 | 39 | 376 | 3.48e-20 | 92.4 |
| MsG0280007139.01.T01 | AT2G18720 | 26.062 | 353 | 199 | 12 | 4 | 309 | 39 | 376 | 3.48e-20 | 92.4 |
| MsG0280007139.01.T01 | AT2G31060 | 29.889 | 271 | 168 | 8 | 5 | 264 | 61 | 320 | 1.86e-19 | 90.9 |
| MsG0280007139.01.T01 | AT2G31060 | 29.818 | 275 | 167 | 9 | 5 | 264 | 61 | 324 | 1.47e-18 | 88.2 |
| MsG0280007139.01.T01 | AT4G18330 | 25.895 | 363 | 199 | 12 | 4 | 314 | 40 | 384 | 3.93e-18 | 86.3 |
| MsG0280007139.01.T01 | AT2G18720 | 27.698 | 278 | 165 | 10 | 55 | 309 | 21 | 285 | 4.34e-16 | 79.7 |
| MsG0280007139.01.T01 | AT1G04170 | 25.344 | 363 | 201 | 13 | 4 | 314 | 34 | 378 | 2.69e-15 | 77.8 |
| MsG0280007139.01.T01 | AT1G04170 | 25.344 | 363 | 201 | 13 | 4 | 314 | 34 | 378 | 2.69e-15 | 77.8 |
| MsG0280007139.01.T01 | AT4G18330 | 27.126 | 247 | 131 | 8 | 4 | 219 | 40 | 268 | 4.18e-14 | 72.8 |
| MsG0280007139.01.T01 | AT5G08650 | 27.426 | 237 | 147 | 8 | 5 | 236 | 88 | 304 | 8.91e-12 | 67.0 |
| MsG0280007139.01.T01 | AT5G08650 | 27.426 | 237 | 147 | 8 | 5 | 236 | 88 | 304 | 1.12e-11 | 67.0 |
Find 90 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGTTAATGTTGGCACTAT+TGG | 0.273823 | 2:+11114576 | MsG0280007139.01.T01:CDS |
| TGCTCCTTTGTTTGAGGCAT+TGG | 0.279738 | 2:-11115306 | None:intergenic |
| ATCAGGTAGTTGAACCTTTC+CGG | 0.286605 | 2:-11116606 | None:intergenic |
| GAAAGCTATCTTGGAACTAA+TGG | 0.286713 | 2:+11115730 | MsG0280007139.01.T01:CDS |
| CGGTAATGTCTGCAGTCTTC+AGG | 0.305535 | 2:-11116586 | None:intergenic |
| TCAACAAGTTCAAGTAAATC+TGG | 0.310000 | 2:-11115487 | None:intergenic |
| CTTACTTTCTACAAATTTCC+TGG | 0.320937 | 2:+11115638 | MsG0280007139.01.T01:CDS |
| TTTACTTGAACTTGTTGAAA+TGG | 0.357731 | 2:+11115492 | MsG0280007139.01.T01:CDS |
| GCTCCTTTGTTTGAGGCATT+GGG | 0.373215 | 2:-11115305 | None:intergenic |
| TTTAAGAAAACTATGGATAA+AGG | 0.383765 | 2:+11116173 | MsG0280007139.01.T01:CDS |
| ACTTGGAAAGAAAGCTATCT+TGG | 0.400190 | 2:+11115721 | MsG0280007139.01.T01:CDS |
| CGACAAGGCTCCCGAGGAAA+AGG | 0.423140 | 2:+11114782 | MsG0280007139.01.T01:CDS |
| CTGAAGACTGCAGACATTAC+CGG | 0.427219 | 2:+11116587 | MsG0280007139.01.T01:CDS |
| ATAGAGAAAATATCTTCTAT+TGG | 0.430558 | 2:-11115812 | None:intergenic |
| GGAAACATTTAAGAAAACTA+TGG | 0.435000 | 2:+11116166 | MsG0280007139.01.T01:CDS |
| GTAGGTTGGTGTGCCATCAC+TGG | 0.437293 | 2:+11115429 | MsG0280007139.01.T01:intron |
| CAAGGGACTAATCATGAACT+TGG | 0.440080 | 2:+11115704 | MsG0280007139.01.T01:CDS |
| AAATTACAGAACATGATAAC+TGG | 0.440965 | 2:+11115234 | MsG0280007139.01.T01:intron |
| GCATATACTCCTTGCTCGTC+AGG | 0.444530 | 2:+11115326 | MsG0280007139.01.T01:CDS |
| GGTGAAGAGGTTGAAATACT+AGG | 0.446514 | 2:+11116023 | MsG0280007139.01.T01:CDS |
| AGTATATGCTCCTTTGTTTG+AGG | 0.452004 | 2:-11115312 | None:intergenic |
| TGAAATACTAGGATTGAAAC+AGG | 0.456486 | 2:+11116034 | MsG0280007139.01.T01:CDS |
| GATAACTGGAGCTGCACAAA+TGG | 0.460078 | 2:+11115248 | MsG0280007139.01.T01:CDS |
| CTTGTGGTTTCTGCTGCAGA+TGG | 0.460316 | 2:+11115282 | MsG0280007139.01.T01:CDS |
| TTACCTTGTTCAAGAGGAAA+AGG | 0.465622 | 2:-11116686 | None:intergenic |
| ATAACCATCTTGACATCATC+AGG | 0.466290 | 2:-11116623 | None:intergenic |
| TTAACATAGTCTGCATGTCC+TGG | 0.467569 | 2:-11115020 | None:intergenic |
| GTCATCAAAAGCAATGGCCT+TGG | 0.471491 | 2:-11114757 | None:intergenic |
| ATGGTTTATGTGAAGGGGCG+TGG | 0.480125 | 2:+11115957 | MsG0280007139.01.T01:intron |
| AGAGCTGAACCTCTCACAAT+TGG | 0.486621 | 2:-11115671 | None:intergenic |
| TCAGCTCTGCATGCCTTGCA+AGG | 0.497966 | 2:+11115686 | MsG0280007139.01.T01:CDS |
| ACAATTGGAATCTCATCTCC+AGG | 0.500833 | 2:-11115656 | None:intergenic |
| CATGTCCTGGGCAATCAACA+TGG | 0.508718 | 2:-11115007 | None:intergenic |
| TAATGCTTACCTTGTTCAAG+AGG | 0.521132 | 2:-11116692 | None:intergenic |
| TATGCCCATGTTGATTGCCC+AGG | 0.523077 | 2:+11115002 | MsG0280007139.01.T01:CDS |
| TTTAGAAAGCAGACCAGTGA+TGG | 0.525766 | 2:-11115442 | None:intergenic |
| AGGACATGCAGACTATGTTA+AGG | 0.526183 | 2:+11115022 | MsG0280007139.01.T01:CDS |
| GAACAAGGTACTATCAAAGT+TGG | 0.530652 | 2:+11116002 | MsG0280007139.01.T01:CDS |
| AAGATTCTAGGAAAGCACTT+TGG | 0.530832 | 2:-11117019 | None:intergenic |
| CTAGTTACAGTAGTCTTCAA+AGG | 0.531189 | 2:-11116140 | None:intergenic |
| AGGTTTGTCAAGCTGTCGCA+CGG | 0.532214 | 2:-11115780 | None:intergenic |
| CAATAGTGCCAACATTAACA+TGG | 0.533603 | 2:-11114575 | None:intergenic |
| AGAGAAGGAGGCCGGACAGT+TGG | 0.538182 | 2:+11116982 | MsG0280007139.01.T01:CDS |
| CAACTCCTTGTCCAACTGTC+CGG | 0.540482 | 2:-11116993 | None:intergenic |
| TTATAGGTTATCGCCAAGCC+TGG | 0.541194 | 2:+11116458 | MsG0280007139.01.T01:intron |
| CTTGTTGAAATGGAGCTTCG+CGG | 0.541276 | 2:+11115502 | MsG0280007139.01.T01:CDS |
| CAGCTCTGCATGCCTTGCAA+GGG | 0.545545 | 2:+11115687 | MsG0280007139.01.T01:CDS |
| AGAAAGCCCCATGTTAATGT+TGG | 0.547639 | 2:+11114567 | None:intergenic |
| TATGTCCTCTCAAAAGATGA+AGG | 0.549372 | 2:+11116518 | MsG0280007139.01.T01:CDS |
| TACTATCAAAGTTGGTGAAG+AGG | 0.550506 | 2:+11116010 | MsG0280007139.01.T01:CDS |
| GGGCGTGGAACTGTTGCCAC+TGG | 0.553588 | 2:+11115972 | MsG0280007139.01.T01:CDS |
| TGGCCCAATGCCTCAAACAA+AGG | 0.557322 | 2:+11115302 | MsG0280007139.01.T01:CDS |
| TAACATAGTCTGCATGTCCT+GGG | 0.560024 | 2:-11115019 | None:intergenic |
| ACCTTGTTCAACACGACCAG+TGG | 0.569555 | 2:-11115988 | None:intergenic |
| ACTATTGGTCATGTGGATCA+TGG | 0.571616 | 2:+11114591 | MsG0280007139.01.T01:CDS |
| ACTACCTGATGATGTCAAGA+TGG | 0.576546 | 2:+11116619 | MsG0280007139.01.T01:CDS |
| GGAGGCCGGACAGTTGGACA+AGG | 0.577816 | 2:+11116988 | MsG0280007139.01.T01:CDS |
| TAAGCGTGGTGATGTGCAGA+GGG | 0.582220 | 2:+11116327 | MsG0280007139.01.T01:CDS |
| GTCGATGTCATCAAAAGCAA+TGG | 0.585110 | 2:-11114763 | None:intergenic |
| TGTTGGCACTATTGGTCATG+TGG | 0.602592 | 2:+11114584 | MsG0280007139.01.T01:CDS |
| TTCATGATTAGTCCCTTGCA+AGG | 0.604536 | 2:-11115699 | None:intergenic |
| TTGAGTATGAGACAGAAAAG+AGG | 0.610425 | 2:+11114976 | MsG0280007139.01.T01:CDS |
| GATGAGATTCCAATTGTGAG+AGG | 0.611787 | 2:+11115662 | MsG0280007139.01.T01:CDS |
| GGTTTGTCAAGCTGTCGCAC+GGG | 0.612457 | 2:-11115779 | None:intergenic |
| GACTGCAGACATTACCGGAA+AGG | 0.613327 | 2:+11116592 | MsG0280007139.01.T01:CDS |
| AGCTGGTGAAGGTAAAGCCA+AGG | 0.614596 | 2:+11114740 | MsG0280007139.01.T01:CDS |
| AATAGTGCCAACATTAACAT+GGG | 0.617734 | 2:-11114574 | None:intergenic |
| TGGTGATGTGCAGAGGGGAA+TGG | 0.620920 | 2:+11116333 | MsG0280007139.01.T01:CDS |
| CTTGGAACTAATGGATGCTG+TGG | 0.623312 | 2:+11115739 | MsG0280007139.01.T01:CDS |
| ACTAACTGCTGCAATTACAA+AGG | 0.625000 | 2:+11114623 | MsG0280007139.01.T01:CDS |
| AATGGATGGTGGAATTCTTG+TGG | 0.628519 | 2:+11115266 | MsG0280007139.01.T01:CDS |
| TTAAGCGTGGTGATGTGCAG+AGG | 0.632346 | 2:+11116326 | MsG0280007139.01.T01:CDS |
| ACTGGAGCTGCACAAATGGA+TGG | 0.633142 | 2:+11115252 | MsG0280007139.01.T01:CDS |
| TTTGTGGAACAGGTACTAGC+TGG | 0.640072 | 2:+11114723 | MsG0280007139.01.T01:intron |
| GAAGACTACTGTAACTAGTG+TGG | 0.641310 | 2:+11116145 | MsG0280007139.01.T01:CDS |
| TGACATCGACAAGGCTCCCG+AGG | 0.641600 | 2:+11114776 | MsG0280007139.01.T01:CDS |
| GCCACTGGTCGTGTTGAACA+AGG | 0.641693 | 2:+11115987 | MsG0280007139.01.T01:CDS |
| GATGTCAAGATGGTTATGCC+TGG | 0.641755 | 2:+11116629 | MsG0280007139.01.T01:CDS |
| AACTACGAACCTGACGAGCA+AGG | 0.644339 | 2:-11115335 | None:intergenic |
| CTTCTACGAGGTCTTAAGCG+TGG | 0.657789 | 2:+11116313 | MsG0280007139.01.T01:CDS |
| ATGTCCTGGGCAATCAACAT+GGG | 0.662675 | 2:-11115006 | None:intergenic |
| GAACAGGTACTAGCTGGTGA+AGG | 0.663577 | 2:+11114729 | MsG0280007139.01.T01:intron |
| GTTGCAGTCACATTATCACC+AGG | 0.669023 | 2:-11116647 | None:intergenic |
| GGAGCTGCACAAATGGATGG+TGG | 0.671654 | 2:+11115255 | MsG0280007139.01.T01:CDS |
| GTCCTCTCAAAAGATGAAGG+TGG | 0.689205 | 2:+11116521 | MsG0280007139.01.T01:CDS |
| GCAGTCTTCAGGTAAAATTG+AGG | 0.692319 | 2:-11116575 | None:intergenic |
| GCTCCCGAGGAAAAGGCGAG+AGG | 0.707764 | 2:+11114789 | MsG0280007139.01.T01:CDS |
| ATAGTGCCAACATTAACATG+GGG | 0.732274 | 2:-11114573 | None:intergenic |
| AAGCGTGGTGATGTGCAGAG+GGG | 0.748666 | 2:+11116328 | MsG0280007139.01.T01:CDS |
| AATGTAGGACTTCTTCTACG+AGG | 0.791049 | 2:+11116301 | MsG0280007139.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTATATGATTATATTG+TGG | - | Chr2:11116928-11116947 | None:intergenic | 15.0% |
| !! | TCTATCAATCAAATTAAAAT+TGG | + | Chr2:11116799-11116818 | MsG0280007139.01.T01:intron | 15.0% |
| !! | TTTATGTATTTGTATTTATC+AGG | + | Chr2:11116098-11116117 | MsG0280007139.01.T01:intron | 15.0% |
| !!! | ACAATCATTTTATTATTAAC+AGG | + | Chr2:11116943-11116962 | MsG0280007139.01.T01:intron | 15.0% |
| !!! | TTCATTTTCATAAAATGAAA+TGG | - | Chr2:11116394-11116413 | None:intergenic | 15.0% |
| !! | ATAGAGAAAATATCTTCTAT+TGG | - | Chr2:11115815-11115834 | None:intergenic | 20.0% |
| !! | TTTAAGAAAACTATGGATAA+AGG | + | Chr2:11116173-11116192 | MsG0280007139.01.T01:CDS | 20.0% |
| !!! | CTATAATTTTCATCAAAAGA+AGG | - | Chr2:11116444-11116463 | None:intergenic | 20.0% |
| !!! | CTTCTTTTGATGAAAATTAT+AGG | + | Chr2:11116442-11116461 | MsG0280007139.01.T01:intron | 20.0% |
| !!! | GTCCTTATTTTTAGTTTTTA+CGG | + | Chr2:11115209-11115228 | MsG0280007139.01.T01:intron | 20.0% |
| !!! | TCAAAAGAAGGTTTTTAAAA+CGG | - | Chr2:11116432-11116451 | None:intergenic | 20.0% |
| !!! | TCTTATAGTTTTTTGCTTTA+TGG | + | Chr2:11116075-11116094 | MsG0280007139.01.T01:intron | 20.0% |
| ! | AAAAAAGTAGAGGATAGTAA+AGG | - | Chr2:11116221-11116240 | None:intergenic | 25.0% |
| ! | AAATTACAGAACATGATAAC+TGG | + | Chr2:11115234-11115253 | MsG0280007139.01.T01:intron | 25.0% |
| ! | AACCTACAAAGAGAAATTTA+TGG | - | Chr2:11115416-11115435 | None:intergenic | 25.0% |
| ! | ATAAATTTCTCTTTGTAGGT+TGG | + | Chr2:11115415-11115434 | MsG0280007139.01.T01:intron | 25.0% |
| ! | CAAATAAAAATAAGACTACG+AGG | - | Chr2:11115541-11115560 | None:intergenic | 25.0% |
| ! | CACCGTAAAAACTAAAAATA+AGG | - | Chr2:11115214-11115233 | None:intergenic | 25.0% |
| ! | GATAATGTATTCCATTACTT+TGG | + | Chr2:11115141-11115160 | MsG0280007139.01.T01:intron | 25.0% |
| ! | GGAAACATTTAAGAAAACTA+TGG | + | Chr2:11116166-11116185 | MsG0280007139.01.T01:CDS | 25.0% |
| ! | TAATAATCCATCTCAAACTA+TGG | - | Chr2:11115077-11115096 | None:intergenic | 25.0% |
| ! | TCTTCTATTGGCATTAAAAA+AGG | - | Chr2:11115803-11115822 | None:intergenic | 25.0% |
| !! | AAGAGAAATTTATGGTCTTA+TGG | - | Chr2:11115408-11115427 | None:intergenic | 25.0% |
| !! | AGAAGATATTTTCTCTATTC+AGG | + | Chr2:11115817-11115836 | MsG0280007139.01.T01:CDS | 25.0% |
| !! | CACATGTATAATAAGTATTG+TGG | - | Chr2:11114692-11114711 | None:intergenic | 25.0% |
| !! | TATGATTATATTGTGGATTG+TGG | - | Chr2:11116921-11116940 | None:intergenic | 25.0% |
| !! | TGAGTGAGAATAATTTTGTA+AGG | - | Chr2:11115860-11115879 | None:intergenic | 25.0% |
| !! | TTATATGTTTTCAATGTACC+AGG | - | Chr2:11116479-11116498 | None:intergenic | 25.0% |
| !!! | AATTTATGGTCTTATGGTTT+TGG | - | Chr2:11115402-11115421 | None:intergenic | 25.0% |
| !!! | ATGTGAATTGATTGATTTTG+TGG | + | Chr2:11114707-11114726 | MsG0280007139.01.T01:intron | 25.0% |
| !!! | CAAAAATTTGCTTTTAGAGA+AGG | + | Chr2:11116967-11116986 | MsG0280007139.01.T01:CDS | 25.0% |
| !!! | GTATTATGTGTCCATTTTTA+GGG | + | Chr2:11116271-11116290 | MsG0280007139.01.T01:intron | 25.0% |
| !!! | TCATATGTCCAACATTTTTT+GGG | + | Chr2:11116890-11116909 | MsG0280007139.01.T01:intron | 25.0% |
| !!! | TGTATTATGTGTCCATTTTT+AGG | + | Chr2:11116270-11116289 | MsG0280007139.01.T01:intron | 25.0% |
| !!! | TTTACTTGAACTTGTTGAAA+TGG | + | Chr2:11115492-11115511 | MsG0280007139.01.T01:CDS | 25.0% |
| AAATTTGTGTGACTCAGTTT+AGG | + | Chr2:11114656-11114675 | MsG0280007139.01.T01:intron | 30.0% | |
| AAGGTAAGCATTATCTATGA+TGG | + | Chr2:11116702-11116721 | MsG0280007139.01.T01:intron | 30.0% | |
| AATAGTGCCAACATTAACAT+GGG | - | Chr2:11114577-11114596 | None:intergenic | 30.0% | |
| ACTATCTATGGTTTATGTGA+AGG | + | Chr2:11115950-11115969 | MsG0280007139.01.T01:intron | 30.0% | |
| CTAAAAATAAGGACAAGACT+CGG | - | Chr2:11115203-11115222 | None:intergenic | 30.0% | |
| CTATCTATGGTTTATGTGAA+GGG | + | Chr2:11115951-11115970 | MsG0280007139.01.T01:intron | 30.0% | |
| CTTACTTTCTACAAATTTCC+TGG | + | Chr2:11115638-11115657 | MsG0280007139.01.T01:CDS | 30.0% | |
| GACCATAAATTTCTCTTTGT+AGG | + | Chr2:11115411-11115430 | MsG0280007139.01.T01:intron | 30.0% | |
| TAAAAATAAGGACAAGACTC+GGG | - | Chr2:11115202-11115221 | None:intergenic | 30.0% | |
| TAAAACGGAGAAGGAAAAAT+TGG | - | Chr2:11116417-11116436 | None:intergenic | 30.0% | |
| TAGAGAAAAATGCAGTATGA+CGG | - | Chr2:11116547-11116566 | None:intergenic | 30.0% | |
| TATCTATGGTTTATGTGAAG+GGG | + | Chr2:11115952-11115971 | MsG0280007139.01.T01:intron | 30.0% | |
| TCAACAAGTTCAAGTAAATC+TGG | - | Chr2:11115490-11115509 | None:intergenic | 30.0% | |
| TGAAATACTAGGATTGAAAC+AGG | + | Chr2:11116034-11116053 | MsG0280007139.01.T01:CDS | 30.0% | |
| TTCACATAAACCATAGATAG+TGG | - | Chr2:11115951-11115970 | None:intergenic | 30.0% | |
| ! | CATTTTGTAAAATCTCCTAG+TGG | + | Chr2:11114887-11114906 | MsG0280007139.01.T01:intron | 30.0% |
| ! | TAAGCATTCTAAGAGAGAAA+AGG | - | Chr2:11116756-11116775 | None:intergenic | 30.0% |
| !! | AAATTTGCTTTTAGAGAAGG+AGG | + | Chr2:11116970-11116989 | MsG0280007139.01.T01:CDS | 30.0% |
| !! | ATTGATTGATTTTGTGGAAC+AGG | + | Chr2:11114713-11114732 | MsG0280007139.01.T01:intron | 30.0% |
| !!! | CTTTTTTTTTCCTCGCTATT+TGG | + | Chr2:11116234-11116253 | MsG0280007139.01.T01:intron | 30.0% |
| !!! | GTCATATGTCCAACATTTTT+TGG | + | Chr2:11116889-11116908 | MsG0280007139.01.T01:intron | 30.0% |
| AAGTTTACGAAATCTCCACT+AGG | - | Chr2:11114905-11114924 | None:intergenic | 35.0% | |
| ACTAACTGCTGCAATTACAA+AGG | + | Chr2:11114623-11114642 | MsG0280007139.01.T01:CDS | 35.0% | |
| ACTTGGAAAGAAAGCTATCT+TGG | + | Chr2:11115721-11115740 | MsG0280007139.01.T01:CDS | 35.0% | |
| AGCGAGGAAAAAAAAAGTAG+AGG | - | Chr2:11116231-11116250 | None:intergenic | 35.0% | |
| ATAACCATCTTGACATCATC+AGG | - | Chr2:11116626-11116645 | None:intergenic | 35.0% | |
| ATAGTGCCAACATTAACATG+GGG | - | Chr2:11114576-11114595 | None:intergenic | 35.0% | |
| CAATAGTGCCAACATTAACA+TGG | - | Chr2:11114578-11114597 | None:intergenic | 35.0% | |
| CATGTTAATGTTGGCACTAT+TGG | + | Chr2:11114576-11114595 | MsG0280007139.01.T01:CDS | 35.0% | |
| CATTATCACCACCCTAAAAA+TGG | - | Chr2:11116285-11116304 | None:intergenic | 35.0% | |
| CTAGTTACAGTAGTCTTCAA+AGG | - | Chr2:11116143-11116162 | None:intergenic | 35.0% | |
| GAAAGCTATCTTGGAACTAA+TGG | + | Chr2:11115730-11115749 | MsG0280007139.01.T01:CDS | 35.0% | |
| TAATGCTTACCTTGTTCAAG+AGG | - | Chr2:11116695-11116714 | None:intergenic | 35.0% | |
| TATAGTGCCATAGTTTGAGA+TGG | + | Chr2:11115067-11115086 | MsG0280007139.01.T01:intron | 35.0% | |
| TATGTCCTCTCAAAAGATGA+AGG | + | Chr2:11116518-11116537 | MsG0280007139.01.T01:CDS | 35.0% | |
| TCGTACAATCTCCAAAGTAA+TGG | - | Chr2:11115155-11115174 | None:intergenic | 35.0% | |
| TTACCTTGTTCAAGAGGAAA+AGG | - | Chr2:11116689-11116708 | None:intergenic | 35.0% | |
| TTGAGTATGAGACAGAAAAG+AGG | + | Chr2:11114976-11114995 | MsG0280007139.01.T01:CDS | 35.0% | |
| ! | AGTATATGCTCCTTTGTTTG+AGG | - | Chr2:11115315-11115334 | None:intergenic | 35.0% |
| ! | CATTCTAAGAGAGAAAAGGA+TGG | - | Chr2:11116752-11116771 | None:intergenic | 35.0% |
| ! | GAACAAGGTACTATCAAAGT+TGG | + | Chr2:11116002-11116021 | MsG0280007139.01.T01:CDS | 35.0% |
| ! | TGCTGCAATTACAAAGGTTT+TGG | + | Chr2:11114629-11114648 | MsG0280007139.01.T01:intron | 35.0% |
| ! | TTACCTTTTCCTCTTGAACA+AGG | + | Chr2:11116683-11116702 | MsG0280007139.01.T01:CDS | 35.0% |
| !! | CATAAACCATAGATAGTGGA+AGG | - | Chr2:11115947-11115966 | None:intergenic | 35.0% |
| !! | TACTATCAAAGTTGGTGAAG+AGG | + | Chr2:11116010-11116029 | MsG0280007139.01.T01:CDS | 35.0% |
| !! | TTATGTGTCCATTTTTAGGG+TGG | + | Chr2:11116274-11116293 | MsG0280007139.01.T01:intron | 35.0% |
| !!! | GAAGGTTTTTAAAACGGAGA+AGG | - | Chr2:11116426-11116445 | None:intergenic | 35.0% |
| !!! | TTTTAGGGTGGTGATAATGT+AGG | + | Chr2:11116286-11116305 | MsG0280007139.01.T01:intron | 35.0% |
| AATGTAGGACTTCTTCTACG+AGG | + | Chr2:11116301-11116320 | MsG0280007139.01.T01:CDS | 40.0% | |
| ACAATTGGAATCTCATCTCC+AGG | - | Chr2:11115659-11115678 | None:intergenic | 40.0% | |
| ACTATTGGTCATGTGGATCA+TGG | + | Chr2:11114591-11114610 | MsG0280007139.01.T01:CDS | 40.0% | |
| AGGACATGCAGACTATGTTA+AGG | + | Chr2:11115022-11115041 | MsG0280007139.01.T01:CDS | 40.0% | |
| ATCAGGTAGTTGAACCTTTC+CGG | - | Chr2:11116609-11116628 | None:intergenic | 40.0% | |
| CAAGGGACTAATCATGAACT+TGG | + | Chr2:11115704-11115723 | MsG0280007139.01.T01:CDS | 40.0% | |
| CACTATAAGCTTGATCGTCA+AGG | - | Chr2:11115054-11115073 | None:intergenic | 40.0% | |
| CAGGAAGTTCACAACATATG+TGG | - | Chr2:11115919-11115938 | None:intergenic | 40.0% | |
| GAAGACTACTGTAACTAGTG+TGG | + | Chr2:11116145-11116164 | MsG0280007139.01.T01:CDS | 40.0% | |
| GATGAGATTCCAATTGTGAG+AGG | + | Chr2:11115662-11115681 | MsG0280007139.01.T01:CDS | 40.0% | |
| GATGTTCCTTCCACTATCTA+TGG | + | Chr2:11115938-11115957 | MsG0280007139.01.T01:intron | 40.0% | |
| GCAGTCTTCAGGTAAAATTG+AGG | - | Chr2:11116578-11116597 | None:intergenic | 40.0% | |
| GGTGAAGAGGTTGAAATACT+AGG | + | Chr2:11116023-11116042 | MsG0280007139.01.T01:CDS | 40.0% | |
| GTCGATGTCATCAAAAGCAA+TGG | - | Chr2:11114766-11114785 | None:intergenic | 40.0% | |
| TAACATAGTCTGCATGTCCT+GGG | - | Chr2:11115022-11115041 | None:intergenic | 40.0% | |
| TTAACATAGTCTGCATGTCC+TGG | - | Chr2:11115023-11115042 | None:intergenic | 40.0% | |
| TTTAGAAAGCAGACCAGTGA+TGG | - | Chr2:11115445-11115464 | None:intergenic | 40.0% | |
| ! | ACTACCTGATGATGTCAAGA+TGG | + | Chr2:11116619-11116638 | MsG0280007139.01.T01:CDS | 40.0% |
| ! | ATCTTGCTGATTGTTCTTGC+AGG | + | Chr2:11114947-11114966 | MsG0280007139.01.T01:intron | 40.0% |
| ! | TGTTTTCAATGTACCAGGCT+TGG | - | Chr2:11116474-11116493 | None:intergenic | 40.0% |
| ! | TTATCAGGCTTTTGTGTGCA+GGG | + | Chr2:11116113-11116132 | MsG0280007139.01.T01:intron | 40.0% |
| ! | TTCATGATTAGTCCCTTGCA+AGG | - | Chr2:11115702-11115721 | None:intergenic | 40.0% |
| ! | TTTATCAGGCTTTTGTGTGC+AGG | + | Chr2:11116112-11116131 | MsG0280007139.01.T01:intron | 40.0% |
| ! | TTTTTCCTCGCTATTTGGAC+TGG | + | Chr2:11116239-11116258 | MsG0280007139.01.T01:intron | 40.0% |
| !! | AATGGATGGTGGAATTCTTG+TGG | + | Chr2:11115266-11115285 | MsG0280007139.01.T01:CDS | 40.0% |
| !! | TAGATAGTGGAAGGAACATC+AGG | - | Chr2:11115938-11115957 | None:intergenic | 40.0% |
| !! | TGCTTTTGATGACATCGACA+AGG | + | Chr2:11114767-11114786 | MsG0280007139.01.T01:CDS | 40.0% |
| !! | TTGGTGTCGTATGAGAAAGT+TGG | + | Chr2:11116818-11116837 | MsG0280007139.01.T01:intron | 40.0% |
| AGAGCTGAACCTCTCACAAT+TGG | - | Chr2:11115674-11115693 | None:intergenic | 45.0% | |
| ATGTCCTGGGCAATCAACAT+GGG | - | Chr2:11115009-11115028 | None:intergenic | 45.0% | |
| CTGAAGACTGCAGACATTAC+CGG | + | Chr2:11116587-11116606 | MsG0280007139.01.T01:CDS | 45.0% | |
| CTTGTTGAAATGGAGCTTCG+CGG | + | Chr2:11115502-11115521 | MsG0280007139.01.T01:CDS | 45.0% | |
| GATAACTGGAGCTGCACAAA+TGG | + | Chr2:11115248-11115267 | MsG0280007139.01.T01:CDS | 45.0% | |
| GATGTCAAGATGGTTATGCC+TGG | + | Chr2:11116629-11116648 | MsG0280007139.01.T01:CDS | 45.0% | |
| GTCATCAAAAGCAATGGCCT+TGG | - | Chr2:11114760-11114779 | None:intergenic | 45.0% | |
| GTCCTCTCAAAAGATGAAGG+TGG | + | Chr2:11116521-11116540 | MsG0280007139.01.T01:CDS | 45.0% | |
| GTTGCAGTCACATTATCACC+AGG | - | Chr2:11116650-11116669 | None:intergenic | 45.0% | |
| TGGTCGCACCCAAAAAATGT+TGG | - | Chr2:11116901-11116920 | None:intergenic | 45.0% | |
| TGTTGGCACTATTGGTCATG+TGG | + | Chr2:11114584-11114603 | MsG0280007139.01.T01:CDS | 45.0% | |
| TTATAGGTTATCGCCAAGCC+TGG | + | Chr2:11116458-11116477 | MsG0280007139.01.T01:intron | 45.0% | |
| TTTGTGGAACAGGTACTAGC+TGG | + | Chr2:11114723-11114742 | MsG0280007139.01.T01:intron | 45.0% | |
| ! | AATTCCTCTCGCCTTTTCCT+CGG | - | Chr2:11114796-11114815 | None:intergenic | 45.0% |
| ! | CTTGGAACTAATGGATGCTG+TGG | + | Chr2:11115739-11115758 | MsG0280007139.01.T01:CDS | 45.0% |
| ! | GCTCCTTTGTTTGAGGCATT+GGG | - | Chr2:11115308-11115327 | None:intergenic | 45.0% |
| ! | TGCTCCTTTGTTTGAGGCAT+TGG | - | Chr2:11115309-11115328 | None:intergenic | 45.0% |
| !! | TTGCTTTTAGAGAAGGAGGC+CGG | + | Chr2:11116974-11116993 | MsG0280007139.01.T01:CDS | 45.0% |
| AACTACGAACCTGACGAGCA+AGG | - | Chr2:11115338-11115357 | None:intergenic | 50.0% | |
| ACCTTGTTCAACACGACCAG+TGG | - | Chr2:11115991-11116010 | None:intergenic | 50.0% | |
| ACTGGAGCTGCACAAATGGA+TGG | + | Chr2:11115252-11115271 | MsG0280007139.01.T01:CDS | 50.0% | |
| AGCTGGTGAAGGTAAAGCCA+AGG | + | Chr2:11114740-11114759 | MsG0280007139.01.T01:CDS | 50.0% | |
| AGGTTTGTCAAGCTGTCGCA+CGG | - | Chr2:11115783-11115802 | None:intergenic | 50.0% | |
| ATCCACCAGTCCAAATAGCG+AGG | - | Chr2:11116247-11116266 | None:intergenic | 50.0% | |
| ATGGTTTATGTGAAGGGGCG+TGG | + | Chr2:11115957-11115976 | MsG0280007139.01.T01:intron | 50.0% | |
| CAACTCCTTGTCCAACTGTC+CGG | - | Chr2:11116996-11117015 | None:intergenic | 50.0% | |
| CATGTCCTGGGCAATCAACA+TGG | - | Chr2:11115010-11115029 | None:intergenic | 50.0% | |
| CGGTAATGTCTGCAGTCTTC+AGG | - | Chr2:11116589-11116608 | None:intergenic | 50.0% | |
| CTTCTACGAGGTCTTAAGCG+TGG | + | Chr2:11116313-11116332 | MsG0280007139.01.T01:CDS | 50.0% | |
| CTTGTGGTTTCTGCTGCAGA+TGG | + | Chr2:11115282-11115301 | MsG0280007139.01.T01:CDS | 50.0% | |
| GAACAGGTACTAGCTGGTGA+AGG | + | Chr2:11114729-11114748 | MsG0280007139.01.T01:intron | 50.0% | |
| GACTGCAGACATTACCGGAA+AGG | + | Chr2:11116592-11116611 | MsG0280007139.01.T01:CDS | 50.0% | |
| GCATATACTCCTTGCTCGTC+AGG | + | Chr2:11115326-11115345 | MsG0280007139.01.T01:CDS | 50.0% | |
| TGGCCCAATGCCTCAAACAA+AGG | + | Chr2:11115302-11115321 | MsG0280007139.01.T01:CDS | 50.0% | |
| ! | ATTCCTCTCGCCTTTTCCTC+GGG | - | Chr2:11114795-11114814 | None:intergenic | 50.0% |
| ! | GGCCACCTTCATCTTTTGAG+AGG | - | Chr2:11116526-11116545 | None:intergenic | 50.0% |
| ! | TAAGCGTGGTGATGTGCAGA+GGG | + | Chr2:11116327-11116346 | MsG0280007139.01.T01:CDS | 50.0% |
| ! | TATGCCCATGTTGATTGCCC+AGG | + | Chr2:11115002-11115021 | MsG0280007139.01.T01:CDS | 50.0% |
| ! | TTAAGCGTGGTGATGTGCAG+AGG | + | Chr2:11116326-11116345 | MsG0280007139.01.T01:CDS | 50.0% |
| ! | TTCCTCGCTATTTGGACTGG+TGG | + | Chr2:11116242-11116261 | MsG0280007139.01.T01:intron | 50.0% |
| CAGCTCTGCATGCCTTGCAA+GGG | + | Chr2:11115687-11115706 | MsG0280007139.01.T01:CDS | 55.0% | |
| GCCACTGGTCGTGTTGAACA+AGG | + | Chr2:11115987-11116006 | MsG0280007139.01.T01:CDS | 55.0% | |
| GGAGCTGCACAAATGGATGG+TGG | + | Chr2:11115255-11115274 | MsG0280007139.01.T01:CDS | 55.0% | |
| GGTTTGTCAAGCTGTCGCAC+GGG | - | Chr2:11115782-11115801 | None:intergenic | 55.0% | |
| TCAGCTCTGCATGCCTTGCA+AGG | + | Chr2:11115686-11115705 | MsG0280007139.01.T01:CDS | 55.0% | |
| ! | AAGCGTGGTGATGTGCAGAG+GGG | + | Chr2:11116328-11116347 | MsG0280007139.01.T01:CDS | 55.0% |
| ! | TGGTGATGTGCAGAGGGGAA+TGG | + | Chr2:11116333-11116352 | MsG0280007139.01.T01:CDS | 55.0% |
| !! | GTAGGTTGGTGTGCCATCAC+TGG | + | Chr2:11115429-11115448 | MsG0280007139.01.T01:intron | 55.0% |
| AGAGAAGGAGGCCGGACAGT+TGG | + | Chr2:11116982-11117001 | MsG0280007139.01.T01:CDS | 60.0% | |
| CGACAAGGCTCCCGAGGAAA+AGG | + | Chr2:11114782-11114801 | MsG0280007139.01.T01:CDS | 60.0% | |
| TGACATCGACAAGGCTCCCG+AGG | + | Chr2:11114776-11114795 | MsG0280007139.01.T01:CDS | 60.0% | |
| GCTCCCGAGGAAAAGGCGAG+AGG | + | Chr2:11114789-11114808 | MsG0280007139.01.T01:CDS | 65.0% | |
| GGAGGCCGGACAGTTGGACA+AGG | + | Chr2:11116988-11117007 | MsG0280007139.01.T01:CDS | 65.0% | |
| GGGCGTGGAACTGTTGCCAC+TGG | + | Chr2:11115972-11115991 | MsG0280007139.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 11114570 | 11117035 | 11114570 | ID=MsG0280007139.01;Name=MsG0280007139.01 |
| Chr2 | mRNA | 11114570 | 11117035 | 11114570 | ID=MsG0280007139.01.T01;Parent=MsG0280007139.01;Name=MsG0280007139.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|0.9|0.72|11|0|389 |
| Chr2 | exon | 11114570 | 11114644 | 11114570 | ID=MsG0280007139.01.T01:exon:2633;Parent=MsG0280007139.01.T01 |
| Chr2 | exon | 11114735 | 11114827 | 11114735 | ID=MsG0280007139.01.T01:exon:2634;Parent=MsG0280007139.01.T01 |
| Chr2 | exon | 11114969 | 11115043 | 11114969 | ID=MsG0280007139.01.T01:exon:2635;Parent=MsG0280007139.01.T01 |
| Chr2 | exon | 11115243 | 11115347 | 11115243 | ID=MsG0280007139.01.T01:exon:2636;Parent=MsG0280007139.01.T01 |
| Chr2 | exon | 11115433 | 11115523 | 11115433 | ID=MsG0280007139.01.T01:exon:2637;Parent=MsG0280007139.01.T01 |
| Chr2 | exon | 11115633 | 11115838 | 11115633 | ID=MsG0280007139.01.T01:exon:2638;Parent=MsG0280007139.01.T01 |
| Chr2 | exon | 11115972 | 11116055 | 11115972 | ID=MsG0280007139.01.T01:exon:2639;Parent=MsG0280007139.01.T01 |
| Chr2 | exon | 11116134 | 11116199 | 11116134 | ID=MsG0280007139.01.T01:exon:2640;Parent=MsG0280007139.01.T01 |
| Chr2 | exon | 11116292 | 11116354 | 11116292 | ID=MsG0280007139.01.T01:exon:2641;Parent=MsG0280007139.01.T01 |
| Chr2 | exon | 11116464 | 11116704 | 11116464 | ID=MsG0280007139.01.T01:exon:2642;Parent=MsG0280007139.01.T01 |
| Chr2 | exon | 11116965 | 11117035 | 11116965 | ID=MsG0280007139.01.T01:exon:2643;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11114570 | 11114644 | 11114570 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11114735 | 11114827 | 11114735 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11114969 | 11115043 | 11114969 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11115243 | 11115347 | 11115243 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11115433 | 11115523 | 11115433 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11115633 | 11115838 | 11115633 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11115972 | 11116055 | 11115972 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11116134 | 11116199 | 11116134 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11116292 | 11116354 | 11116292 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11116464 | 11116704 | 11116464 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Chr2 | CDS | 11116965 | 11117035 | 11116965 | ID=MsG0280007139.01.T01:cds;Parent=MsG0280007139.01.T01 |
| Gene Sequence |
| Protein sequence |
