AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000525.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000525.01.T01 MTR_1g013760 96.591 264 8 1 43 305 22 285 0.0 533
MsG0180000525.01.T01 MTR_3g106060 59.480 269 85 8 43 296 27 286 1.00e-93 280
MsG0180000525.01.T01 MTR_2g105060 46.494 271 111 5 45 296 58 313 1.86e-66 211
MsG0180000525.01.T01 MTR_2g105060 45.238 252 104 5 64 296 2 238 5.69e-59 189
MsG0180000525.01.T01 MTR_4g007060 41.489 282 131 8 38 296 10 280 2.32e-52 173
MsG0180000525.01.T01 MTR_4g007060 41.971 274 126 7 46 296 51 314 4.30e-51 171
MsG0180000525.01.T01 MTR_1g013790 39.113 248 120 7 67 297 5 238 1.40e-41 144
MsG0180000525.01.T01 MTR_7g110720 29.126 309 155 7 45 295 99 401 2.30e-28 113
MsG0180000525.01.T01 MTR_2g023930 31.984 247 120 6 16 217 119 362 3.07e-28 114
MsG0180000525.01.T01 MTR_4g007060 42.857 161 77 2 46 200 51 202 3.46e-28 109
MsG0180000525.01.T01 MTR_7g110720 29.085 306 132 7 45 295 99 374 1.24e-27 111
MsG0180000525.01.T01 MTR_4g132430 31.169 231 107 7 37 226 108 327 8.65e-25 104
MsG0180000525.01.T01 MTR_3g053330 32.536 209 83 5 145 295 236 444 1.96e-24 102
MsG0180000525.01.T01 MTR_4g094412 52.564 78 37 0 140 217 223 300 1.56e-23 100
MsG0180000525.01.T01 MTR_4g094412 52.564 78 37 0 140 217 214 291 1.69e-23 100
MsG0180000525.01.T01 MTR_4g107970 56.000 75 33 0 143 217 238 312 3.02e-23 100
MsG0180000525.01.T01 MTR_4g107970 56.000 75 33 0 143 217 161 235 3.07e-23 100
MsG0180000525.01.T01 MTR_7g009730 46.739 92 49 0 143 234 202 293 6.88e-23 99.0
MsG0180000525.01.T01 MTR_2g088000 48.889 90 46 0 145 234 334 423 7.87e-23 99.0
MsG0180000525.01.T01 MTR_2g045360 32.323 198 87 6 112 268 156 347 3.27e-22 96.3
MsG0180000525.01.T01 MTR_4g132430 50.000 82 41 0 145 226 112 193 6.22e-22 94.7
MsG0180000525.01.T01 MTR_4g049790 31.621 253 122 9 1 236 170 388 2.85e-20 91.3
MsG0180000525.01.T01 MTR_4g049760 34.177 158 79 4 71 217 204 347 5.42e-20 90.5
MsG0180000525.01.T01 MTR_1g086790 41.667 96 51 2 144 239 146 236 4.90e-19 86.3
MsG0180000525.01.T01 MTR_5g094430 57.895 57 23 1 161 217 231 286 5.81e-19 87.0
MsG0180000525.01.T01 MTR_5g094430 57.895 57 23 1 161 217 253 308 5.88e-19 87.0
MsG0180000525.01.T01 MTR_5g016610 54.386 57 26 0 161 217 200 256 6.85e-19 84.7
MsG0180000525.01.T01 MTR_5g094430 57.895 57 23 1 161 217 365 420 7.11e-19 87.0
MsG0180000525.01.T01 MTR_7g109800 58.333 60 24 1 158 217 143 201 7.46e-19 85.1
MsG0180000525.01.T01 MTR_3g056100 39.286 112 59 4 112 217 219 327 9.75e-19 86.7
MsG0180000525.01.T01 MTR_3g056100 39.286 112 59 4 112 217 206 314 1.01e-18 86.3
MsG0180000525.01.T01 MTR_5g097490 52.703 74 32 2 145 218 239 309 1.01e-18 85.9
MsG0180000525.01.T01 MTR_3g056100 39.286 112 59 4 112 217 350 458 1.19e-18 86.7
MsG0180000525.01.T01 MTR_3g056100 39.286 112 59 4 112 217 363 471 1.20e-18 86.7
MsG0180000525.01.T01 MTR_4g094908 50.769 65 32 0 161 225 267 331 1.53e-18 85.1
MsG0180000525.01.T01 MTR_5g091390 47.297 74 34 2 144 217 145 213 1.65e-18 84.3
MsG0180000525.01.T01 MTR_1g070455 49.315 73 35 1 148 218 279 351 1.84e-18 85.1
MsG0180000525.01.T01 MTR_4g094588 57.895 57 23 1 161 217 179 234 2.49e-18 84.3
MsG0180000525.01.T01 MTR_5g043880 42.308 104 48 4 120 217 83 180 2.51e-18 83.6
MsG0180000525.01.T01 MTR_1g009613 36.538 104 55 1 114 217 227 319 8.82e-18 82.8
MsG0180000525.01.T01 MTR_7g100510 50.746 67 32 1 151 217 352 417 1.41e-17 83.2
MsG0180000525.01.T01 MTR_7g100510 53.333 75 26 4 161 228 190 262 5.28e-16 78.2
MsG0180000525.01.T01 MTR_5g074400 47.945 73 35 2 145 217 407 476 1.56e-17 83.2
MsG0180000525.01.T01 MTR_5g074400 50.877 57 26 2 161 217 244 298 4.30e-13 70.1
MsG0180000525.01.T01 MTR_3g104750 44.737 76 39 2 142 217 88 160 1.71e-17 78.6
MsG0180000525.01.T01 MTR_4g082580 46.341 82 38 3 136 217 259 334 1.82e-17 82.4
MsG0180000525.01.T01 MTR_5g042920 45.122 82 39 3 136 217 301 376 1.82e-17 82.8
MsG0180000525.01.T01 MTR_5g042920 54.386 57 24 2 161 217 152 206 1.01e-13 71.6
MsG0180000525.01.T01 MTR_2g033820 47.297 74 34 2 144 217 191 259 1.88e-17 82.4
MsG0180000525.01.T01 MTR_7g011820 34.677 124 75 3 94 217 349 466 5.89e-17 81.3
MsG0180000525.01.T01 MTR_7g011820 49.123 57 27 2 161 217 229 283 5.39e-11 63.5
MsG0180000525.01.T01 MTR_7g062220 49.333 75 37 1 161 235 125 198 7.27e-17 80.1
MsG0180000525.01.T01 MTR_8g087000 51.724 58 28 0 161 218 78 135 1.48e-16 77.8
MsG0180000525.01.T01 MTR_8g087000 51.724 58 28 0 161 218 77 134 1.61e-16 77.8
MsG0180000525.01.T01 MTR_3g031220 46.575 73 36 2 145 217 352 421 1.79e-16 80.1
MsG0180000525.01.T01 MTR_3g031220 52.632 57 25 2 161 217 199 253 2.88e-13 70.5
MsG0180000525.01.T01 MTR_1g015140 50.877 57 27 1 161 217 103 158 3.79e-16 75.1
MsG0180000525.01.T01 MTR_0117s0040 52.632 57 27 0 161 217 75 131 4.08e-16 76.6
MsG0180000525.01.T01 MTR_4g013260 41.304 92 48 3 126 217 307 392 4.82e-16 78.6
MsG0180000525.01.T01 MTR_4g013260 49.123 57 28 1 161 217 185 240 7.20e-13 69.3
MsG0180000525.01.T01 MTR_2g016770 49.123 57 29 0 161 217 36 92 6.68e-16 75.5
MsG0180000525.01.T01 MTR_4g127040 50.000 58 29 0 161 218 246 303 8.03e-16 77.0
MsG0180000525.01.T01 MTR_7g079010 54.098 61 27 1 161 221 142 201 8.33e-16 75.5
MsG0180000525.01.T01 MTR_2g016770 49.123 57 29 0 161 217 28 84 8.37e-16 75.1
MsG0180000525.01.T01 MTR_3g009470 34.921 126 70 4 145 261 482 604 8.54e-16 78.2
MsG0180000525.01.T01 MTR_3g009470 50.877 57 26 2 161 217 281 335 1.42e-11 65.5
MsG0180000525.01.T01 MTR_3g108960 52.632 57 27 0 161 217 315 371 9.04e-16 77.4
MsG0180000525.01.T01 MTR_7g028415 52.459 61 28 1 161 221 94 153 1.55e-15 73.6
MsG0180000525.01.T01 MTR_7g028710 52.459 61 28 1 161 221 94 153 1.55e-15 73.6
MsG0180000525.01.T01 MTR_1g077780 41.026 78 43 2 140 217 44 118 1.93e-15 72.4
MsG0180000525.01.T01 MTR_7g080000 44.737 76 39 2 142 217 416 488 2.09e-15 77.0
MsG0180000525.01.T01 MTR_7g071120 45.205 73 37 2 145 217 311 380 2.18e-15 76.6
MsG0180000525.01.T01 MTR_7g071120 49.123 57 27 2 161 217 167 221 3.83e-11 63.9
MsG0180000525.01.T01 MTR_2g024350 33.607 122 74 3 161 275 9 130 2.19e-15 74.3
MsG0180000525.01.T01 MTR_3g095080 52.632 57 26 1 161 217 145 200 2.55e-15 73.9
MsG0180000525.01.T01 MTR_8g092140 52.632 57 26 1 161 217 161 216 2.93e-15 73.9
MsG0180000525.01.T01 MTR_3g095080 52.632 57 26 1 161 217 169 224 3.12e-15 74.3
MsG0180000525.01.T01 MTR_7g080020 32.911 158 88 7 134 283 472 619 5.31e-15 75.9
MsG0180000525.01.T01 MTR_8g007270 52.632 57 26 1 161 217 155 210 5.50e-15 73.2
MsG0180000525.01.T01 MTR_4g122530 45.205 73 37 2 145 217 195 264 6.16e-15 75.1
MsG0180000525.01.T01 MTR_2g083870 52.632 57 27 0 161 217 81 137 6.68e-15 73.6
MsG0180000525.01.T01 MTR_8g096730 45.161 62 33 1 161 222 71 131 2.07e-14 69.7
MsG0180000525.01.T01 MTR_2g032030 42.857 77 39 1 146 217 248 324 2.92e-14 73.2
MsG0180000525.01.T01 MTR_2g032030 42.857 77 39 1 146 217 248 324 3.15e-14 73.2
MsG0180000525.01.T01 MTR_4g130900 49.123 57 28 1 161 217 360 415 4.33e-14 72.8
MsG0180000525.01.T01 MTR_8g098945 47.458 59 31 0 159 217 128 186 4.99e-14 71.2
MsG0180000525.01.T01 MTR_2g024380 32.773 119 73 3 161 272 252 370 1.00e-13 71.6
MsG0180000525.01.T01 MTR_3g095040 49.123 57 28 1 161 217 119 174 1.09e-13 68.9
MsG0180000525.01.T01 MTR_3g031220 52.632 57 25 2 161 217 199 253 1.99e-13 70.5
MsG0180000525.01.T01 MTR_8g028565 45.614 57 31 0 161 217 156 212 2.22e-13 70.1
MsG0180000525.01.T01 MTR_7g109600 47.368 57 30 0 161 217 54 110 3.02e-13 68.9
MsG0180000525.01.T01 MTR_8g092010 45.614 57 30 1 161 217 109 164 3.05e-13 67.4
MsG0180000525.01.T01 MTR_7g079040 47.368 57 30 0 161 217 155 211 3.78e-13 69.3
MsG0180000525.01.T01 MTR_4g047580 35.870 92 59 0 145 236 266 357 4.60e-13 69.7
MsG0180000525.01.T01 MTR_6g086555 39.773 88 47 4 132 218 182 264 5.41e-13 69.3
MsG0180000525.01.T01 MTR_1g078260 37.234 94 53 4 126 218 217 305 1.67e-12 68.2
MsG0180000525.01.T01 MTR_1g099600 36.842 76 48 0 161 236 186 261 2.72e-12 66.6
MsG0180000525.01.T01 MTR_3g009470 50.877 57 26 2 161 217 281 335 1.34e-11 65.5
MsG0180000525.01.T01 MTR_5g097500 46.479 71 36 2 147 217 218 286 1.75e-11 64.3
MsG0180000525.01.T01 MTR_8g099350 50.877 57 26 1 161 215 133 189 2.32e-11 64.3
MsG0180000525.01.T01 MTR_3g090860 50.877 57 26 1 161 215 134 190 2.81e-11 63.9
MsG0180000525.01.T01 MTR_5g067680 49.123 57 27 1 161 215 203 259 3.37e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000525.01.T01 AT1G80840 41.695 295 134 9 33 299 16 300 4.61e-65 207
MsG0180000525.01.T01 AT4G31800 42.958 284 137 9 33 299 33 308 2.54e-60 195
MsG0180000525.01.T01 AT2G25000 41.516 277 114 8 34 299 30 269 3.13e-60 193
MsG0180000525.01.T01 AT2G25000 42.205 263 107 7 45 299 1 226 7.66e-59 188
MsG0180000525.01.T01 AT2G25000 42.205 263 107 7 45 299 1 226 7.66e-59 188
MsG0180000525.01.T01 AT2G25000 41.825 263 108 7 45 299 23 248 4.74e-58 187
MsG0180000525.01.T01 AT4G31800 54.706 170 67 4 132 299 82 243 1.46e-52 173
MsG0180000525.01.T01 AT4G31800 40.860 186 84 5 33 197 33 213 7.37e-33 121
MsG0180000525.01.T01 AT4G04450 48.913 92 47 0 145 236 183 274 4.48e-24 101
MsG0180000525.01.T01 AT4G04450 48.913 92 47 0 145 236 277 368 8.96e-24 101
MsG0180000525.01.T01 AT1G68150 49.485 97 48 1 136 231 210 306 9.69e-24 100
MsG0180000525.01.T01 AT4G01720 33.173 208 106 4 38 217 94 296 1.55e-23 100
MsG0180000525.01.T01 AT4G22070 54.795 73 33 0 145 217 282 354 1.46e-22 98.2
MsG0180000525.01.T01 AT4G22070 54.795 73 33 0 145 217 282 354 1.46e-22 98.2
MsG0180000525.01.T01 AT4G22070 54.795 73 33 0 145 217 282 354 1.46e-22 98.2
MsG0180000525.01.T01 AT4G22070 54.795 73 33 0 145 217 282 354 1.46e-22 98.2
MsG0180000525.01.T01 AT1G62300 54.795 73 33 0 145 217 297 369 2.34e-22 97.4
MsG0180000525.01.T01 AT5G15130 52.703 74 35 0 161 234 186 259 5.45e-22 96.3
MsG0180000525.01.T01 AT5G15130 52.703 74 35 0 161 234 228 301 8.00e-22 95.9
MsG0180000525.01.T01 AT1G18860 64.912 57 20 0 161 217 240 296 3.07e-21 94.0
MsG0180000525.01.T01 AT1G64000 57.377 61 25 1 161 221 115 174 9.40e-19 82.8
MsG0180000525.01.T01 AT4G18170 53.333 60 27 1 158 217 170 228 1.41e-18 84.7
MsG0180000525.01.T01 AT1G29860 53.333 60 27 1 158 217 134 192 1.56e-18 84.3
MsG0180000525.01.T01 AT2G04880 57.627 59 24 1 159 217 282 339 3.32e-18 85.1
MsG0180000525.01.T01 AT5G26170 50.877 57 27 1 161 217 114 169 3.78e-18 80.9
MsG0180000525.01.T01 AT2G04880 57.627 59 24 1 159 217 306 363 3.83e-18 85.1
MsG0180000525.01.T01 AT5G41570 57.377 61 25 1 161 221 99 158 3.87e-18 80.9
MsG0180000525.01.T01 AT2G47260 55.000 60 26 1 158 217 172 230 3.97e-18 84.0
MsG0180000525.01.T01 AT5G07100 38.614 101 58 3 117 217 101 197 6.82e-18 81.3
MsG0180000525.01.T01 AT5G07100 46.479 71 37 1 147 217 11 80 7.06e-14 70.1
MsG0180000525.01.T01 AT5G07100 38.614 101 58 3 117 217 101 197 6.82e-18 81.3
MsG0180000525.01.T01 AT5G07100 46.479 71 37 1 147 217 11 80 7.06e-14 70.1
MsG0180000525.01.T01 AT5G07100 38.614 101 58 3 117 217 101 197 6.82e-18 81.3
MsG0180000525.01.T01 AT5G07100 46.479 71 37 1 147 217 11 80 7.06e-14 70.1
MsG0180000525.01.T01 AT5G07100 38.614 101 58 3 117 217 101 197 6.82e-18 81.3
MsG0180000525.01.T01 AT5G07100 46.479 71 37 1 147 217 11 80 7.06e-14 70.1
MsG0180000525.01.T01 AT4G26640 49.315 73 34 2 145 217 192 261 6.98e-18 83.6
MsG0180000525.01.T01 AT4G26640 49.315 73 34 2 145 217 192 261 6.98e-18 83.6
MsG0180000525.01.T01 AT4G26640 49.315 73 34 2 145 217 192 261 6.98e-18 83.6
MsG0180000525.01.T01 AT4G26640 49.315 73 34 2 145 217 192 261 6.98e-18 83.6
MsG0180000525.01.T01 AT1G13960 45.122 82 39 3 136 217 237 312 8.94e-18 83.2
MsG0180000525.01.T01 AT1G13960 52.632 57 25 2 161 217 77 131 9.29e-13 68.6
MsG0180000525.01.T01 AT4G26640 49.315 73 34 2 145 217 296 365 1.28e-17 83.2
MsG0180000525.01.T01 AT4G26640 56.140 57 24 1 161 217 342 397 1.33e-17 83.6
MsG0180000525.01.T01 AT4G26640 56.140 57 24 1 161 217 382 437 1.36e-17 83.6
MsG0180000525.01.T01 AT2G30590 54.386 57 26 0 161 217 314 370 1.60e-17 82.4
MsG0180000525.01.T01 AT2G03340 45.122 82 39 3 136 217 396 471 1.91e-17 82.8
MsG0180000525.01.T01 AT2G03340 52.632 57 25 2 161 217 251 305 2.10e-13 70.9
MsG0180000525.01.T01 AT5G49520 47.222 72 34 2 161 229 222 292 2.03e-17 82.4
MsG0180000525.01.T01 AT1G13960 47.945 73 35 2 145 217 396 465 2.03e-17 82.8
MsG0180000525.01.T01 AT1G13960 52.632 57 25 2 161 217 230 284 1.39e-12 68.6
MsG0180000525.01.T01 AT5G46350 47.222 72 33 2 146 217 173 239 2.05e-17 81.6
MsG0180000525.01.T01 AT4G31550 52.632 57 27 0 161 217 247 303 2.07e-17 81.6
MsG0180000525.01.T01 AT4G31550 52.632 57 27 0 161 217 246 302 2.22e-17 81.6
MsG0180000525.01.T01 AT1G69810 50.000 74 36 1 145 217 130 203 4.65e-17 80.9
MsG0180000525.01.T01 AT5G07100 38.614 101 58 3 117 217 194 290 4.65e-17 80.5
MsG0180000525.01.T01 AT5G07100 46.479 71 37 1 147 217 104 173 3.11e-13 69.3
MsG0180000525.01.T01 AT1G69810 50.000 74 36 1 145 217 188 261 6.00e-17 80.9
MsG0180000525.01.T01 AT1G69310 54.386 57 25 1 161 217 148 203 7.20e-17 79.7
MsG0180000525.01.T01 AT1G69310 54.386 57 25 1 161 217 148 203 7.20e-17 79.7
MsG0180000525.01.T01 AT1G69310 54.386 57 25 1 161 217 148 203 7.20e-17 79.7
MsG0180000525.01.T01 AT3G62340 51.562 64 30 1 154 217 112 174 9.68e-17 79.0
MsG0180000525.01.T01 AT2G23320 49.123 57 29 0 161 217 241 297 9.99e-17 79.7
MsG0180000525.01.T01 AT5G56270 47.945 73 35 2 145 217 474 543 1.24e-16 80.9
MsG0180000525.01.T01 AT5G56270 30.137 146 94 4 72 217 191 328 3.53e-11 64.3
MsG0180000525.01.T01 AT5G13080 53.226 62 28 1 161 222 68 128 1.35e-16 75.9
MsG0180000525.01.T01 AT2G24570 52.632 57 27 0 161 217 244 300 1.43e-16 79.3
MsG0180000525.01.T01 AT3G01080 46.575 73 36 2 145 217 293 362 1.84e-16 79.7
MsG0180000525.01.T01 AT5G28650 45.833 72 37 1 148 217 248 319 1.94e-16 79.0
MsG0180000525.01.T01 AT3G01080 46.575 73 36 2 145 217 331 400 2.21e-16 79.7
MsG0180000525.01.T01 AT1G29280 50.877 57 28 0 161 217 75 131 2.64e-16 77.4
MsG0180000525.01.T01 AT4G24240 48.276 58 30 0 161 218 282 339 3.64e-16 78.2
MsG0180000525.01.T01 AT3G04670 44.444 72 38 1 148 217 248 319 4.29e-16 77.8
MsG0180000525.01.T01 AT2G38470 45.205 73 37 2 145 217 349 418 7.49e-16 78.2
MsG0180000525.01.T01 AT2G38470 52.632 57 25 2 161 217 185 239 2.20e-13 70.9
MsG0180000525.01.T01 AT4G30935 45.455 66 35 1 152 217 323 387 3.01e-15 76.3
MsG0180000525.01.T01 AT2G44745 52.632 57 26 1 161 217 146 201 3.19e-15 73.6
MsG0180000525.01.T01 AT3G01970 49.180 61 30 1 161 221 66 125 5.67e-15 71.2
MsG0180000525.01.T01 AT2G30250 45.205 73 37 2 145 217 315 384 5.84e-15 75.1
MsG0180000525.01.T01 AT2G30250 46.479 71 34 3 161 231 167 233 4.51e-11 63.5
MsG0180000525.01.T01 AT1G55600 50.000 62 30 1 161 222 308 368 1.21e-14 74.3
MsG0180000525.01.T01 AT2G37260 45.588 68 36 1 150 217 259 325 1.46e-14 73.6
MsG0180000525.01.T01 AT2G37260 39.362 94 50 3 147 235 72 163 3.01e-14 72.8
MsG0180000525.01.T01 AT2G37260 45.588 68 36 1 150 217 257 323 1.52e-14 73.6
MsG0180000525.01.T01 AT2G37260 39.362 94 50 3 147 235 70 161 3.14e-14 72.8
MsG0180000525.01.T01 AT2G37260 45.588 68 36 1 150 217 339 405 1.59e-14 73.9
MsG0180000525.01.T01 AT2G37260 39.362 94 50 3 147 235 152 243 2.97e-14 73.2
MsG0180000525.01.T01 AT2G21900 38.298 94 52 3 147 239 95 183 2.25e-14 70.9
MsG0180000525.01.T01 AT2G34830 47.692 65 34 0 153 217 208 272 2.62e-14 73.2
MsG0180000525.01.T01 AT2G34830 47.692 65 34 0 153 217 217 281 2.81e-14 73.2
MsG0180000525.01.T01 AT4G39410 50.877 57 27 1 161 217 224 279 4.11e-14 72.0
MsG0180000525.01.T01 AT1G30650 47.692 65 34 0 153 217 210 274 5.10e-14 72.4
MsG0180000525.01.T01 AT3G58710 49.123 57 29 0 161 217 71 127 5.68e-14 71.2
MsG0180000525.01.T01 AT3G58710 49.123 57 29 0 161 217 72 128 5.86e-14 71.2
MsG0180000525.01.T01 AT2G46130 50.877 57 27 1 161 217 31 86 2.02e-13 65.9
MsG0180000525.01.T01 AT5G64810 45.614 57 30 1 161 217 111 166 2.04e-13 68.2
MsG0180000525.01.T01 AT5G43290 40.789 76 43 2 142 217 97 170 2.72e-13 69.3
MsG0180000525.01.T01 AT4G01250 45.614 57 31 0 161 217 129 185 2.87e-13 69.3
MsG0180000525.01.T01 AT5G52830 49.123 57 29 0 161 217 166 222 3.76e-13 69.3
MsG0180000525.01.T01 AT4G26440 43.836 73 38 2 145 217 359 428 4.57e-13 70.1
MsG0180000525.01.T01 AT1G69310 50.877 57 23 2 161 217 148 199 1.67e-12 67.0
MsG0180000525.01.T01 AT5G45050 34.951 103 64 1 115 217 1110 1209 1.70e-12 68.6
MsG0180000525.01.T01 AT5G45050 34.951 103 64 1 115 217 1138 1237 1.77e-12 68.6
MsG0180000525.01.T01 AT5G45050 34.951 103 64 1 115 217 999 1098 2.10e-12 68.2
MsG0180000525.01.T01 AT4G23550 30.000 140 89 3 159 296 139 271 4.30e-12 66.2
MsG0180000525.01.T01 AT2G46400 43.836 73 37 2 145 215 91 161 7.31e-12 65.1

Find 60 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTATTTCTGGAAGAATTT+TGG 0.107436 1:+7408997 MsG0180000525.01.T01:CDS
GCACTTGCCACTGCTATTTC+TGG 0.167473 1:+7408986 MsG0180000525.01.T01:CDS
AATTGCTGGATAGATGATTT+TGG 0.173303 1:-7408911 None:intergenic
TGGAACATTATCAAGCTTAA+TGG 0.220468 1:-7408891 None:intergenic
TTCCTCACCTAAGGCTTATA+AGG 0.237117 1:+7407798 MsG0180000525.01.T01:CDS
ATGGAGGAGGGAGGGGATTC+TGG 0.238340 1:+7405950 MsG0180000525.01.T01:CDS
TCTTTCTTGATTGTTGTGTT+TGG 0.315541 1:-7407648 None:intergenic
GCAAGTGCTGTAGTGAAATT+AGG 0.319456 1:-7408971 None:intergenic
CAAAGTGAAGAAGCTCCTTT+AGG 0.328438 1:+7408818 MsG0180000525.01.T01:CDS
GGATATCAATGGAGGAAATA+TGG 0.328462 1:+7408033 MsG0180000525.01.T01:CDS
AATATGTTTGATACTGTTAG+AGG 0.330331 1:+7407697 MsG0180000525.01.T01:CDS
ATTTGTTCTTATTAGAAGTA+TGG 0.343403 1:-7409021 None:intergenic
TTATGTGCAGGACGAAGTTT+TGG 0.348061 1:+7407501 MsG0180000525.01.T01:intron
CCTCTCCTAGAGCTTACTTT+AGG 0.371319 1:+7408079 MsG0180000525.01.T01:CDS
TATGTTGCAACTAGTATAGT+AGG 0.404321 1:-7408740 None:intergenic
ATGAAGAATCATTAATCAAA+AGG 0.454669 1:+7407761 MsG0180000525.01.T01:CDS
GACGAAGATGGAGGAGGGAG+GGG 0.460517 1:+7405943 MsG0180000525.01.T01:CDS
TGATGCGAAGTCGACGAAGA+TGG 0.470627 1:+7405931 MsG0180000525.01.T01:CDS
CTAAAGGAGCTTCTTCACTT+TGG 0.478227 1:-7408817 None:intergenic
ATACTTCTAATAAGAACAAA+TGG 0.482703 1:+7409023 MsG0180000525.01.T01:CDS
GGAGGGAGGGGATTCTGGCG+AGG 0.483980 1:+7405955 MsG0180000525.01.T01:CDS
ATGGAGGAAATATGGTCAAA+AGG 0.485930 1:+7408041 MsG0180000525.01.T01:CDS
ACAAGAACCTTATAAGCCTT+AGG 0.486641 1:-7407805 None:intergenic
ACATTATCAAGCTTAATGGT+TGG 0.490629 1:-7408887 None:intergenic
CATTAATCAAAAGGCCATGT+AGG 0.493040 1:+7407770 MsG0180000525.01.T01:CDS
ATACTAGTTGCAACATATGA+AGG 0.494693 1:+7408746 MsG0180000525.01.T01:CDS
TAGGGATATTTCCTCACCTA+AGG 0.500791 1:+7407789 MsG0180000525.01.T01:CDS
AACTGGGCAGCTTGGAGCAT+AGG 0.506437 1:-7408106 None:intergenic
CGACGAAGATGGAGGAGGGA+GGG 0.507349 1:+7405942 MsG0180000525.01.T01:CDS
GAGCACCTAAAGTAAGCTCT+AGG 0.538868 1:-7408084 None:intergenic
ATTAATCAAAAGGCCATGTA+GGG 0.538909 1:+7407771 MsG0180000525.01.T01:CDS
CCTAAAGTAAGCTCTAGGAG+AGG 0.548395 1:-7408079 None:intergenic
CTCATAGTTCTCACACATGT+TGG 0.554828 1:-7407578 None:intergenic
AGACAGTGCTAGTGAAGAGG+TGG 0.556783 1:+7405978 MsG0180000525.01.T01:CDS
TGGTGCGAAGTCGACAGAGA+TGG 0.558959 1:+7405894 MsG0180000525.01.T01:CDS
GTAACATGAACTGAACCTAA+AGG 0.560432 1:-7408833 None:intergenic
CTAAAGTAAGCTCTAGGAGA+GGG 0.569732 1:-7408078 None:intergenic
TCGACGAAGATGGAGGAGGG+AGG 0.571572 1:+7405941 MsG0180000525.01.T01:CDS
GAAGTCGACGAAGATGGAGG+AGG 0.572260 1:+7405937 MsG0180000525.01.T01:CDS
GTCTCAGTTCTGAGAACAAG+AGG 0.575865 1:+7407539 MsG0180000525.01.T01:CDS
GAAGTCGACAGAGATGGAGG+AGG 0.581351 1:+7405900 MsG0180000525.01.T01:CDS
TTTCAGCTTTCTCATGACCA+TGG 0.582497 1:-7408778 None:intergenic
TCGACAGACAATGATGAGAC+TGG 0.590884 1:+7405874 None:intergenic
GGTATAAAGTATGTGATGGA+TGG 0.592987 1:+7408012 MsG0180000525.01.T01:intron
ATGTGATGGATGGATATCAA+TGG 0.593080 1:+7408022 MsG0180000525.01.T01:CDS
TTGTGGTATAAAGTATGTGA+TGG 0.595565 1:+7408008 MsG0180000525.01.T01:intron
AGGAGACAGTGCTAGTGAAG+AGG 0.601565 1:+7405975 MsG0180000525.01.T01:CDS
ATGTTGCAACTAGTATAGTA+GGG 0.601976 1:-7408739 None:intergenic
TGCGAAGTCGACGAAGATGG+AGG 0.603320 1:+7405934 MsG0180000525.01.T01:CDS
AAGTCGACAGAGATGGAGGA+GGG 0.616669 1:+7405901 MsG0180000525.01.T01:CDS
AAGTCGACGAAGATGGAGGA+GGG 0.617822 1:+7405938 MsG0180000525.01.T01:CDS
GGTGAGGAAATATCCCTACA+TGG 0.620508 1:-7407784 None:intergenic
TGCGAAGTCGACAGAGATGG+AGG 0.628545 1:+7405897 MsG0180000525.01.T01:CDS
GTTCTTTGAATAATTTGTTG+AGG 0.631715 1:-7408860 None:intergenic
TCGACAGAGATGGAGGAGGG+AGG 0.636382 1:+7405904 MsG0180000525.01.T01:CDS
AACCTTATAAGCCTTAGGTG+AGG 0.658225 1:-7407800 None:intergenic
TAAAGTAAGCTCTAGGAGAG+GGG 0.664718 1:-7408077 None:intergenic
TGATGGATGGATATCAATGG+AGG 0.669535 1:+7408025 MsG0180000525.01.T01:CDS
AATTCTTCCAGAAATAGCAG+TGG 0.680346 1:-7408993 None:intergenic
TATGAAGGAGAGCACAACCA+TGG 0.694590 1:+7408761 MsG0180000525.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAATATACAATACTTA+GGG - Chr1:7407312-7407331 None:intergenic 10.0%
!! GATTATATGTAAAAAATTAA+AGG - Chr1:7406402-7406421 None:intergenic 10.0%
!! TAATAAATACAAATGAAATA+AGG + Chr1:7406749-7406768 MsG0180000525.01.T01:intron 10.0%
!! TATATTAATTTCACTAAAAA+TGG + Chr1:7407321-7407340 MsG0180000525.01.T01:intron 10.0%
!!! ATATTACAATAATTTTTAGT+AGG + Chr1:7408259-7408278 MsG0180000525.01.T01:intron 10.0%
!!! TTGATTTGAAAAAAATAATT+CGG + Chr1:7408416-7408435 MsG0180000525.01.T01:intron 10.0%
!! AAAATATATCAAATTGTTGT+TGG - Chr1:7406472-7406491 None:intergenic 15.0%
!! ATAAAAATATATAACGACAA+AGG + Chr1:7406434-7406453 MsG0180000525.01.T01:intron 15.0%
!! GAAATTAATATACAATACTT+AGG - Chr1:7407313-7407332 None:intergenic 15.0%
!! TAAAAATATATAACGACAAA+GGG + Chr1:7406435-7406454 MsG0180000525.01.T01:intron 15.0%
!! TAATTCAATAATGTTGAAAT+TGG + Chr1:7407344-7407363 MsG0180000525.01.T01:intron 15.0%
!! TACAAATTCAAAATTAATCA+AGG - Chr1:7407987-7408006 None:intergenic 15.0%
!! TACATATCTGAATTAAAATT+TGG + Chr1:7406135-7406154 MsG0180000525.01.T01:intron 15.0%
!!! ATCAAAATTTGATTTTGTTT+GGG - Chr1:7408677-7408696 None:intergenic 15.0%
!!! TAATTTTGAATTTGTATTTG+TGG + Chr1:7407991-7408010 MsG0180000525.01.T01:intron 15.0%
!! AATACTTAGGGATATAATAA+AGG - Chr1:7407300-7407319 None:intergenic 20.0%
!! AGAAACAAAAGTAAAAAGAT+AGG + Chr1:7408547-7408566 MsG0180000525.01.T01:intron 20.0%
!! ATACTTAGGGATATAATAAA+GGG - Chr1:7407299-7407318 None:intergenic 20.0%
!! ATACTTCTAATAAGAACAAA+TGG + Chr1:7409023-7409042 MsG0180000525.01.T01:CDS 20.0%
!! ATGAAGAATCATTAATCAAA+AGG + Chr1:7407761-7407780 MsG0180000525.01.T01:CDS 20.0%
!! ATTTGTTCTTATTAGAAGTA+TGG - Chr1:7409024-7409043 None:intergenic 20.0%
!! CTCTTATGTCATTATTAATT+AGG + Chr1:7408697-7408716 MsG0180000525.01.T01:intron 20.0%
!! GTTAAAAAAAATTAAAGAGC+AGG + Chr1:7406157-7406176 MsG0180000525.01.T01:intron 20.0%
!! TATATAAATATAGGTGTGAA+AGG - Chr1:7406925-7406944 None:intergenic 20.0%
!! TCGTGGATATATATAAATAT+AGG - Chr1:7406934-7406953 None:intergenic 20.0%
!!! AATGTCATTCTAAGAAATTT+AGG - Chr1:7407474-7407493 None:intergenic 20.0%
!!! AGATGATTTTAAAACTTAGA+AGG - Chr1:7408447-7408466 None:intergenic 20.0%
!!! ATGTCATTCTAAGAAATTTA+GGG - Chr1:7407473-7407492 None:intergenic 20.0%
!!! ATTATTACCTTCTTTTTAAC+TGG - Chr1:7408126-7408145 None:intergenic 20.0%
!!! CGTTTTTTGAAAAAAACTAA+CGG + Chr1:7406261-7406280 MsG0180000525.01.T01:intron 20.0%
!!! GATCAAAATTTGATTTTGTT+TGG - Chr1:7408678-7408697 None:intergenic 20.0%
!!! TCAATATCTTTATAGTCTTT+TGG + Chr1:7406670-7406689 MsG0180000525.01.T01:intron 20.0%
!!! TGTTAACATACCATTTTTTT+GGG + Chr1:7406698-7406717 MsG0180000525.01.T01:intron 20.0%
!!! TTATTACCTTCTTTTTAACT+GGG - Chr1:7408125-7408144 None:intergenic 20.0%
!!! TTTTAATTCAGATATGTATC+AGG - Chr1:7406133-7406152 None:intergenic 20.0%
!!! TTTTCAAAAAACGTTAACTT+TGG - Chr1:7406254-7406273 None:intergenic 20.0%
! AAACATCAAGAACAATTTGA+TGG + Chr1:7407149-7407168 MsG0180000525.01.T01:intron 25.0%
! AATATGCATGTCTTAAATCT+TGG - Chr1:7406585-7406604 None:intergenic 25.0%
! AATATGTTTGATACTGTTAG+AGG + Chr1:7407697-7407716 MsG0180000525.01.T01:CDS 25.0%
! AGTCTTTATATGAAAAGATG+TGG - Chr1:7408298-7408317 None:intergenic 25.0%
! ATTGAGACAGTTAAAAGTTA+AGG + Chr1:7406326-7406345 MsG0180000525.01.T01:intron 25.0%
! CAGTTAATGAAGTAAAATTG+TGG + Chr1:7407941-7407960 MsG0180000525.01.T01:intron 25.0%
! CATGTTTACCAACAATATAT+TGG - Chr1:7408368-7408387 None:intergenic 25.0%
! GAAACGCAAAAATAAGTTAA+GGG + Chr1:7406358-7406377 MsG0180000525.01.T01:intron 25.0%
! GAAAGAAATTAAAATGGTAG+AGG - Chr1:7406964-7406983 None:intergenic 25.0%
! TAATACACAATGTCGTATTT+AGG - Chr1:7407216-7407235 None:intergenic 25.0%
! TACTTAGACCAATATATTGT+TGG + Chr1:7408357-7408376 MsG0180000525.01.T01:intron 25.0%
! TAGGAGAAAAAAATAAGCAT+AGG - Chr1:7406789-7406808 None:intergenic 25.0%
! TCTTGAATCAAAATCATGAA+TGG - Chr1:7408650-7408669 None:intergenic 25.0%
! TGAAACGCAAAAATAAGTTA+AGG + Chr1:7406357-7406376 MsG0180000525.01.T01:intron 25.0%
! TTGAGACAGTTAAAAGTTAA+GGG + Chr1:7406327-7406346 MsG0180000525.01.T01:intron 25.0%
! TTTCGATAGAGATTACTAAT+CGG - Chr1:7408238-7408257 None:intergenic 25.0%
! TTTGAAAAAAACTAACGGAA+GGG + Chr1:7406266-7406285 MsG0180000525.01.T01:intron 25.0%
!! AAGATTTAAGACATGCATAT+TGG + Chr1:7406584-7406603 MsG0180000525.01.T01:intron 25.0%
!! ACATTGAAAATTTTATGTGC+AGG + Chr1:7407489-7407508 MsG0180000525.01.T01:intron 25.0%
!! AGTATTTCTACCCAAAAAAA+TGG - Chr1:7406711-7406730 None:intergenic 25.0%
!! TGATTCTAAAGGAAAATTGA+AGG - Chr1:7406889-7406908 None:intergenic 25.0%
!!! AACTTTTAACTGTCTCAATT+TGG - Chr1:7406325-7406344 None:intergenic 25.0%
!!! CTGTTAACATACCATTTTTT+TGG + Chr1:7406697-7406716 MsG0180000525.01.T01:intron 25.0%
!!! CTTATTTTTGCGTTTCATTT+TGG - Chr1:7406354-7406373 None:intergenic 25.0%
!!! GTTCTTTGAATAATTTGTTG+AGG - Chr1:7408863-7408882 None:intergenic 25.0%
!!! TTTTGAAAAAAACTAACGGA+AGG + Chr1:7406265-7406284 MsG0180000525.01.T01:intron 25.0%
AAACAATATACTTCAGGTAG+AGG - Chr1:7406524-7406543 None:intergenic 30.0%
ACATTATCAAGCTTAATGGT+TGG - Chr1:7408890-7408909 None:intergenic 30.0%
ATAAACGGAGAGATACTTAT+GGG + Chr1:7406298-7406317 MsG0180000525.01.T01:intron 30.0%
ATAAATATAGGTGTGAAAGG+TGG - Chr1:7406922-7406941 None:intergenic 30.0%
ATACTAGTTGCAACATATGA+AGG + Chr1:7408746-7408765 MsG0180000525.01.T01:CDS 30.0%
ATATATAACGACAAAGGGAA+AGG + Chr1:7406440-7406459 MsG0180000525.01.T01:intron 30.0%
ATCGTTTAAGAAGAGAGAAA+CGG + Chr1:7406025-7406044 MsG0180000525.01.T01:intron 30.0%
ATGCATATTGGTATTTGTCT+TGG + Chr1:7406596-7406615 MsG0180000525.01.T01:intron 30.0%
ATGTTGCAACTAGTATAGTA+GGG - Chr1:7408742-7408761 None:intergenic 30.0%
ATTAATCAAAAGGCCATGTA+GGG + Chr1:7407771-7407790 MsG0180000525.01.T01:CDS 30.0%
ATTCAGATATGTATCAGGAA+AGG - Chr1:7406128-7406147 None:intergenic 30.0%
GAAGAAGACTTTGATTCTAA+AGG - Chr1:7406900-7406919 None:intergenic 30.0%
GCTGCTGAAAGAAATTAAAA+TGG - Chr1:7406970-7406989 None:intergenic 30.0%
GTCTTCAAACAATATACTTC+AGG - Chr1:7406530-7406549 None:intergenic 30.0%
TAAAGGGTAAATACAGACTT+TGG - Chr1:7406385-7406404 None:intergenic 30.0%
TATATAACGACAAAGGGAAA+GGG + Chr1:7406441-7406460 MsG0180000525.01.T01:intron 30.0%
TATGAAAAGATGTGGTTGAT+AGG - Chr1:7408290-7408309 None:intergenic 30.0%
TATGTTGCAACTAGTATAGT+AGG - Chr1:7408743-7408762 None:intergenic 30.0%
TCTTTCTTGATTGTTGTGTT+TGG - Chr1:7407651-7407670 None:intergenic 30.0%
TGGAACATTATCAAGCTTAA+TGG - Chr1:7408894-7408913 None:intergenic 30.0%
TTGTGGTATAAAGTATGTGA+TGG + Chr1:7408008-7408027 MsG0180000525.01.T01:intron 30.0%
TTTGTTGAACCAAAAATTGC+TGG - Chr1:7408928-7408947 None:intergenic 30.0%
! AATTGCTGGATAGATGATTT+TGG - Chr1:7408914-7408933 None:intergenic 30.0%
! ATCATCTATCCAGCAATTTT+TGG + Chr1:7408916-7408935 MsG0180000525.01.T01:CDS 30.0%
!!! GCAATTTTTGGTTCAACAAA+TGG + Chr1:7408928-7408947 MsG0180000525.01.T01:CDS 30.0%
!!! TGCTATTTCTGGAAGAATTT+TGG + Chr1:7408997-7409016 MsG0180000525.01.T01:CDS 30.0%
AAAAAACGTTAACTTTGGCC+AGG - Chr1:7406249-7406268 None:intergenic 35.0%
AATTCTTCCAGAAATAGCAG+TGG - Chr1:7408996-7409015 None:intergenic 35.0%
ACAAGAACCTTATAAGCCTT+AGG - Chr1:7407808-7407827 None:intergenic 35.0%
AGATGACGACATATTTGAGT+AGG + Chr1:7406843-7406862 MsG0180000525.01.T01:intron 35.0%
AGATTACTAATCGGTGAAGT+AGG - Chr1:7408229-7408248 None:intergenic 35.0%
ATCAGATGCATGTGATTGAT+CGG + Chr1:7406192-7406211 MsG0180000525.01.T01:intron 35.0%
ATGGAGGAAATATGGTCAAA+AGG + Chr1:7408041-7408060 MsG0180000525.01.T01:CDS 35.0%
CATTAATCAAAAGGCCATGT+AGG + Chr1:7407770-7407789 MsG0180000525.01.T01:CDS 35.0%
CTTTCAGCAGCAAATAACAA+TGG + Chr1:7406979-7406998 MsG0180000525.01.T01:intron 35.0%
GATAAACGGAGAGATACTTA+TGG + Chr1:7406297-7406316 MsG0180000525.01.T01:intron 35.0%
GGATATCAATGGAGGAAATA+TGG + Chr1:7408033-7408052 MsG0180000525.01.T01:CDS 35.0%
GTAACATGAACTGAACCTAA+AGG - Chr1:7408836-7408855 None:intergenic 35.0%
TAGTGCTTCTTCTATACTCA+AGG + Chr1:7407039-7407058 MsG0180000525.01.T01:intron 35.0%
TATCTCTCCGTTTATCAAAG+TGG - Chr1:7406293-7406312 None:intergenic 35.0%
TCATTTGCATGGCGTATATT+AGG - Chr1:7406816-7406835 None:intergenic 35.0%
! ATCTTGTTTCGTCATTTGCA+TGG - Chr1:7406827-7406846 None:intergenic 35.0%
! GGTATAAAGTATGTGATGGA+TGG + Chr1:7408012-7408031 MsG0180000525.01.T01:intron 35.0%
! TTGATGGTAATAACCCACTT+AGG + Chr1:7407165-7407184 MsG0180000525.01.T01:intron 35.0%
!! ATGTGATGGATGGATATCAA+TGG + Chr1:7408022-7408041 MsG0180000525.01.T01:CDS 35.0%
AAATTAAAGAGCAGGACACG+TGG + Chr1:7406165-7406184 MsG0180000525.01.T01:intron 40.0%
AACAATGGAATCAACATGCG+TGG + Chr1:7406994-7407013 MsG0180000525.01.T01:intron 40.0%
AACCTTATAAGCCTTAGGTG+AGG - Chr1:7407803-7407822 None:intergenic 40.0%
AAGCTGCCCAGTTAAAAAGA+AGG + Chr1:7408116-7408135 MsG0180000525.01.T01:CDS 40.0%
AGGAAAGGAAAAGATTGTCC+TGG - Chr1:7406113-7406132 None:intergenic 40.0%
ATGGTAGAGGTTAAAGTTCG+TGG - Chr1:7406951-7406970 None:intergenic 40.0%
CAAAGTGAAGAAGCTCCTTT+AGG + Chr1:7408818-7408837 MsG0180000525.01.T01:CDS 40.0%
CTAAAGGAGCTTCTTCACTT+TGG - Chr1:7408820-7408839 None:intergenic 40.0%
CTCATAGTTCTCACACATGT+TGG - Chr1:7407581-7407600 None:intergenic 40.0%
GAAAATGGATGTCCTGGATT+CGG + Chr1:7406630-7406649 MsG0180000525.01.T01:intron 40.0%
GAAGGGACCACTTTGATAAA+CGG + Chr1:7406283-7406302 MsG0180000525.01.T01:intron 40.0%
GGAAAGGAAAAGATTGTCCT+GGG - Chr1:7406112-7406131 None:intergenic 40.0%
TAAGAAGAGAGAAACGGTGT+TGG + Chr1:7406031-7406050 MsG0180000525.01.T01:intron 40.0%
TAGGGATATTTCCTCACCTA+AGG + Chr1:7407789-7407808 MsG0180000525.01.T01:CDS 40.0%
TGGTAATAACCCACTTAGGT+TGG + Chr1:7407169-7407188 MsG0180000525.01.T01:intron 40.0%
TTACTAATCGGTGAAGTAGG+TGG - Chr1:7408226-7408245 None:intergenic 40.0%
TTCCTCACCTAAGGCTTATA+AGG + Chr1:7407798-7407817 MsG0180000525.01.T01:CDS 40.0%
TTGGCCTAATGGTATTAGCT+TGG + Chr1:7407188-7407207 MsG0180000525.01.T01:intron 40.0%
TTTCAGCTTTCTCATGACCA+TGG - Chr1:7408781-7408800 None:intergenic 40.0%
! GCAAGTGCTGTAGTGAAATT+AGG - Chr1:7408974-7408993 None:intergenic 40.0%
! GTGGGATCATTTCTGGAAAA+TGG + Chr1:7406083-7406102 MsG0180000525.01.T01:intron 40.0%
! TGATGGATGGATATCAATGG+AGG + Chr1:7408025-7408044 MsG0180000525.01.T01:CDS 40.0%
! TGGCCTAATGGTATTAGCTT+GGG + Chr1:7407189-7407208 MsG0180000525.01.T01:intron 40.0%
! TTATGTGCAGGACGAAGTTT+TGG + Chr1:7407501-7407520 MsG0180000525.01.T01:intron 40.0%
! TTTCTGGAAAATGGATTCCC+AGG + Chr1:7406092-7406111 MsG0180000525.01.T01:intron 40.0%
!! CTAAAGTAAGCTCTAGGAGA+GGG - Chr1:7408081-7408100 None:intergenic 40.0%
!! TAAAGTAAGCTCTAGGAGAG+GGG - Chr1:7408080-7408099 None:intergenic 40.0%
!! TTCTTTTTAACTGGGCAGCT+TGG - Chr1:7408117-7408136 None:intergenic 40.0%
AACGATTCCTCCATCACAGA+CGG - Chr1:7406011-7406030 None:intergenic 45.0%
ACCATTAGGCCAACCTAAGT+GGG - Chr1:7407181-7407200 None:intergenic 45.0%
CCTCTCCTAGAGCTTACTTT+AGG + Chr1:7408079-7408098 MsG0180000525.01.T01:CDS 45.0%
GAGCACCTAAAGTAAGCTCT+AGG - Chr1:7408087-7408106 None:intergenic 45.0%
GATGCATGTGATTGATCGGA+CGG + Chr1:7406196-7406215 MsG0180000525.01.T01:intron 45.0%
GGTCCCAAGCTAATACCATT+AGG - Chr1:7407195-7407214 None:intergenic 45.0%
GGTGAGGAAATATCCCTACA+TGG - Chr1:7407787-7407806 None:intergenic 45.0%
TACCATTAGGCCAACCTAAG+TGG - Chr1:7407182-7407201 None:intergenic 45.0%
TGTGGAGAAAATGGATGTCC+TGG + Chr1:7406624-7406643 MsG0180000525.01.T01:intron 45.0%
! TATGAAGGAGAGCACAACCA+TGG + Chr1:7408761-7408780 MsG0180000525.01.T01:CDS 45.0%
!! CCTAAAGTAAGCTCTAGGAG+AGG - Chr1:7408082-7408101 None:intergenic 45.0%
!! GTCTCAGTTCTGAGAACAAG+AGG + Chr1:7407539-7407558 MsG0180000525.01.T01:CDS 45.0%
!! ATTATATGTAAAAAATTAAA+GGG - Chr1:7406401-7406420 None:intergenic 5.0%
AAGTCGACAGAGATGGAGGA+GGG + Chr1:7405901-7405920 MsG0180000525.01.T01:CDS 50.0%
AAGTCGACGAAGATGGAGGA+GGG + Chr1:7405938-7405957 MsG0180000525.01.T01:CDS 50.0%
AGACAGTGCTAGTGAAGAGG+TGG + Chr1:7405978-7405997 MsG0180000525.01.T01:CDS 50.0%
AGGAGACAGTGCTAGTGAAG+AGG + Chr1:7405975-7405994 MsG0180000525.01.T01:CDS 50.0%
ATGGCGTATATTAGGCGCGT+AGG - Chr1:7406808-7406827 None:intergenic 50.0%
ATGTGATTGATCGGACGGAC+CGG + Chr1:7406201-7406220 MsG0180000525.01.T01:intron 50.0%
GTATTTGTCTTGGCGCAGTG+TGG + Chr1:7406606-7406625 MsG0180000525.01.T01:intron 50.0%
TGAAGAGCAAGTCCGAATCC+AGG - Chr1:7406645-7406664 None:intergenic 50.0%
TGATGCGAAGTCGACGAAGA+TGG + Chr1:7405931-7405950 MsG0180000525.01.T01:CDS 50.0%
TTGGCGCAGTGTGGAGAAAA+TGG + Chr1:7406615-7406634 MsG0180000525.01.T01:intron 50.0%
! GAAGAGAGAAACGGTGTTGG+TGG + Chr1:7406034-7406053 MsG0180000525.01.T01:intron 50.0%
!! ACCCACTTAGGTTGGCCTAA+TGG + Chr1:7407177-7407196 MsG0180000525.01.T01:intron 50.0%
!! GCACTTGCCACTGCTATTTC+TGG + Chr1:7408986-7409005 MsG0180000525.01.T01:CDS 50.0%
AACTGGGCAGCTTGGAGCAT+AGG - Chr1:7408109-7408128 None:intergenic 55.0%
AAGACGACCGTCTGTGATGG+AGG + Chr1:7406001-7406020 MsG0180000525.01.T01:intron 55.0%
GAAGTCGACAGAGATGGAGG+AGG + Chr1:7405900-7405919 MsG0180000525.01.T01:CDS 55.0%
GAAGTCGACGAAGATGGAGG+AGG + Chr1:7405937-7405956 MsG0180000525.01.T01:CDS 55.0%
TGCGAAGTCGACAGAGATGG+AGG + Chr1:7405897-7405916 MsG0180000525.01.T01:CDS 55.0%
TGCGAAGTCGACGAAGATGG+AGG + Chr1:7405934-7405953 MsG0180000525.01.T01:CDS 55.0%
TGGAAGACGACCGTCTGTGA+TGG + Chr1:7405998-7406017 MsG0180000525.01.T01:intron 55.0%
TGGTGCGAAGTCGACAGAGA+TGG + Chr1:7405894-7405913 MsG0180000525.01.T01:CDS 55.0%
AGAAATGATCCCACCGCCGC+CGG - Chr1:7406077-7406096 None:intergenic 60.0%
AGCCCACGTGGAAGCTTACC+TGG + Chr1:7406228-7406247 MsG0180000525.01.T01:intron 60.0%
ATGGAGGAGGGAGGGGATTC+TGG + Chr1:7405950-7405969 MsG0180000525.01.T01:CDS 60.0%
CGACGAAGATGGAGGAGGGA+GGG + Chr1:7405942-7405961 MsG0180000525.01.T01:CDS 60.0%
GACGAAGATGGAGGAGGGAG+GGG + Chr1:7405943-7405962 MsG0180000525.01.T01:CDS 60.0%
GCTTCCACGTGGGCTCAATC+CGG - Chr1:7406223-7406242 None:intergenic 60.0%
GGCCAGGTAAGCTTCCACGT+GGG - Chr1:7406233-7406252 None:intergenic 60.0%
GGTGCGCTGCCTCTATATGC+CGG + Chr1:7406055-7406074 MsG0180000525.01.T01:intron 60.0%
TCGACAGAGATGGAGGAGGG+AGG + Chr1:7405904-7405923 MsG0180000525.01.T01:CDS 60.0%
TCGACGAAGATGGAGGAGGG+AGG + Chr1:7405941-7405960 MsG0180000525.01.T01:CDS 60.0%
TGGCCAGGTAAGCTTCCACG+TGG - Chr1:7406234-7406253 None:intergenic 60.0%
CTCTATATGCCGGCGGCGGT+GGG + Chr1:7406065-7406084 MsG0180000525.01.T01:intron 65.0%
CTGCCTCTATATGCCGGCGG+CGG + Chr1:7406061-7406080 MsG0180000525.01.T01:intron 65.0%
GCGCTGCCTCTATATGCCGG+CGG + Chr1:7406058-7406077 MsG0180000525.01.T01:intron 65.0%
GGCGGCGGTGGGATCATTTC+TGG + Chr1:7406076-7406095 MsG0180000525.01.T01:intron 65.0%
CCACCGCCGCCGGCATATAG+AGG - Chr1:7406067-7406086 None:intergenic 70.0%
CCTCTATATGCCGGCGGCGG+TGG + Chr1:7406064-7406083 MsG0180000525.01.T01:intron 70.0%
CGGACCGGATTGAGCCCACG+TGG + Chr1:7406216-7406235 MsG0180000525.01.T01:intron 70.0%
GGAGGGAGGGGATTCTGGCG+AGG + Chr1:7405955-7405974 MsG0180000525.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 7405884 7409048 7405884 ID=MsG0180000525.01;Name=MsG0180000525.01
Chr1 mRNA 7405884 7409048 7405884 ID=MsG0180000525.01.T01;Parent=MsG0180000525.01;Name=MsG0180000525.01.T01;_AED=0.50;_eAED=0.57;_QI=0|0|0|1|1|1|4|0|305
Chr1 exon 7405884 7406009 7405884 ID=MsG0180000525.01.T01:exon:27718;Parent=MsG0180000525.01.T01
Chr1 exon 7407511 7407855 7407511 ID=MsG0180000525.01.T01:exon:27717;Parent=MsG0180000525.01.T01
Chr1 exon 7408021 7408137 7408021 ID=MsG0180000525.01.T01:exon:27716;Parent=MsG0180000525.01.T01
Chr1 exon 7408719 7409048 7408719 ID=MsG0180000525.01.T01:exon:27715;Parent=MsG0180000525.01.T01
Chr1 CDS 7405884 7406009 7405884 ID=MsG0180000525.01.T01:cds;Parent=MsG0180000525.01.T01
Chr1 CDS 7407511 7407855 7407511 ID=MsG0180000525.01.T01:cds;Parent=MsG0180000525.01.T01
Chr1 CDS 7408021 7408137 7408021 ID=MsG0180000525.01.T01:cds;Parent=MsG0180000525.01.T01
Chr1 CDS 7408719 7409048 7408719 ID=MsG0180000525.01.T01:cds;Parent=MsG0180000525.01.T01
Gene Sequence

>MsG0180000525.01.T01

ATGATGAGACTGGTGCGAAGTCGACAGAGATGGAGGAGGGAGGAGACTGATGCGAAGTCGACGAAGATGGAGGAGGGAGGGGATTCTGGCGAGGAGACAGTGCTAGTGAAGAGGTGGAAGACGACCGACGAAGTTTTGGTTGAAGAGTTACATCGTCTCAGTTCTGAGAACAAGAGGCTAAATGAAACATTGACCAACATGTGTGAGAACTATGAGACTATGCAAAAGCAATTGAATCAATTGATGAATCAAAATTTTGAACACCAAACACAACAATCAAGAAAGAGAAAAGCTGAGAGTGAAAGTTGCATCAATATGTTTGATACTGTTAGAGGCATTAATATTATCAATAATAATGAGTGCAGCACTGTTACTGATGAAGAATCATTAATCAAAAGGCCATGTAGGGATATTTCCTCACCTAAGGCTTATAAGGTTCTTGTGAAGACAGAAGCATCTAGTAATAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTTACTAGAGATAACCCCTCTCCTAGAGCTTACTTTAGGTGCTCCTATGCTCCAAGCTGCCCAGTTAAAAAGAAGGTGCAAAAAAGTTTAGAAGACCCTACTATACTAGTTGCAACATATGAAGGAGAGCACAACCATGGTCATGAGAAAGCTGAAATATCAATGATATCAAGCCAAAGTGAAGAAGCTCCTTTAGGTTCAGTTCATGTTACTTCACCTCAACAAATTATTCAAAGAACATGTCCAACCATTAAGCTTGATAATGTTCCAAAATCATCTATCCAGCAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAATGATCCTAATTTCACTACAGCACTTGCCACTGCTATTTCTGGAAGAATTTTGGACCATACTTCTAATAAGAACAAATGGTGA
Protein sequence

>MsG0180000525.01.T01

MMRLVRSRQRWRREETDAKSTKMEEGGDSGEETVLVKRWKTTDEVLVEELHRLSSENKRLNETLTNMCENYETMQKQLNQLMNQNFEHQTQQSRKRKAESESCINMFDTVRGINIINNNECSTVTDEESLIKRPCRDISSPKAYKVLVKTEASSNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSYAPSCPVKKKVQKSLEDPTILVATYEGEHNHGHEKAEISMISSQSEEAPLGSVHVTSPQQIIQRTCPTIKLDNVPKSSIQQFLVQQMATSLTNDPNFTTALATAISGRILDHTSNKNKW*