Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039433.01.T01 | XP_003623638.1 | 95.053 | 283 | 13 | 1 | 1 | 282 | 1 | 283 | 0 | 559 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039433.01.T01 | K4BIZ9 | 38 | 200 | 105 | 5 | 6 | 199 | 5 | 191 | 1.82E-36 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000525.01 | MsG0780039433.01 | 0.833016 | 6.791691e-56 | 7.723824e-53 |
| MsG0180000526.01 | MsG0780039433.01 | 0.846906 | 1.617757e-59 | 2.826657e-56 |
| MsG0180000649.01 | MsG0780039433.01 | 0.806734 | 7.122251e-50 | 3.895254e-47 |
| MsG0180000650.01 | MsG0780039433.01 | 0.818935 | 1.511477e-52 | 1.147182e-49 |
| MsG0180000653.01 | MsG0780039433.01 | 0.821597 | 3.709666e-53 | 3.031356e-50 |
| MsG0180004765.01 | MsG0780039433.01 | 0.844385 | 7.810607e-59 | 1.258793e-55 |
| MsG0180004766.01 | MsG0780039433.01 | 0.859985 | 2.830345e-63 | 7.617908e-60 |
| MsG0180005279.01 | MsG0780039433.01 | 0.828095 | 1.087864e-54 | 1.070578e-51 |
| MsG0280011163.01 | MsG0780039433.01 | 0.811665 | 6.249435e-51 | 3.891415e-48 |
| MsG0680035580.01 | MsG0780039433.01 | 0.839653 | 1.393076e-57 | 1.936464e-54 |
| MsG0480020167.01 | MsG0780039433.01 | 0.824601 | 7.389888e-54 | 6.577286e-51 |
| MsG0480020887.01 | MsG0780039433.01 | 0.845380 | 4.210313e-59 | 7.003290e-56 |
| MsG0480022572.01 | MsG0780039433.01 | 0.809513 | 1.823428e-50 | 1.072712e-47 |
| MsG0480022575.01 | MsG0780039433.01 | 0.810670 | 1.027150e-50 | 6.230149e-48 |
| MsG0480022579.01 | MsG0780039433.01 | 0.818927 | 1.518515e-52 | 1.152240e-49 |
| MsG0580025739.01 | MsG0780039433.01 | 0.803202 | 3.900702e-49 | 1.948333e-46 |
| MsG0380015165.01 | MsG0780039433.01 | 0.800306 | 1.533226e-48 | 7.115552e-46 |
| MsG0380016708.01 | MsG0780039433.01 | 0.819968 | 8.790434e-53 | 6.865634e-50 |
| MsG0680030694.01 | MsG0780039433.01 | 0.803979 | 2.691980e-49 | 1.371785e-46 |
| MsG0280007547.01 | MsG0780039433.01 | 0.823580 | 1.282829e-53 | 1.109029e-50 |
| MsG0780038401.01 | MsG0780039433.01 | 0.814126 | 1.805767e-51 | 1.201432e-48 |
| MsG0780039432.01 | MsG0780039433.01 | 0.900151 | 9.753719e-78 | 1.244996e-73 |
| MsG0780039433.01 | MsG0780039847.01 | 0.827465 | 1.541231e-54 | 1.489149e-51 |
| MsG0780039433.01 | MsG0780041475.01 | 0.862327 | 5.481512e-64 | 1.598985e-60 |
| MsG0780039433.01 | MsG0880042434.01 | 0.832942 | 7.088035e-56 | 8.042368e-53 |
| MsG0780039433.01 | MsG0880042656.01 | 0.827566 | 1.457808e-54 | 1.412522e-51 |
| MsG0780039433.01 | MsG0880045765.01 | 0.810688 | 1.017625e-50 | 6.175342e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039433.01.T01 | MTR_7g073430 | 95.053 | 283 | 13 | 1 | 1 | 282 | 1 | 283 | 0.0 | 559 |
| MsG0780039433.01.T01 | MTR_7g073380 | 84.014 | 294 | 35 | 3 | 1 | 282 | 1 | 294 | 0.0 | 505 |
| MsG0780039433.01.T01 | MTR_0002s1250 | 47.321 | 224 | 105 | 5 | 12 | 229 | 5 | 221 | 1.45e-62 | 198 |
| MsG0780039433.01.T01 | MTR_8g005750 | 42.182 | 275 | 134 | 7 | 13 | 276 | 4 | 264 | 1.60e-60 | 193 |
| MsG0780039433.01.T01 | MTR_8g032510 | 46.262 | 214 | 102 | 4 | 13 | 218 | 7 | 215 | 7.80e-56 | 182 |
| MsG0780039433.01.T01 | MTR_2g075690 | 39.683 | 252 | 117 | 7 | 10 | 229 | 12 | 260 | 1.22e-47 | 161 |
| MsG0780039433.01.T01 | MTR_2g075700 | 40.316 | 253 | 122 | 5 | 6 | 229 | 7 | 259 | 2.25e-44 | 153 |
| MsG0780039433.01.T01 | MTR_2g075680 | 39.179 | 268 | 126 | 7 | 10 | 241 | 12 | 278 | 3.62e-42 | 147 |
| MsG0780039433.01.T01 | MTR_5g067700 | 39.241 | 237 | 106 | 13 | 5 | 237 | 4 | 206 | 1.63e-38 | 135 |
| MsG0780039433.01.T01 | MTR_3g093830 | 42.623 | 183 | 83 | 7 | 20 | 189 | 23 | 196 | 1.49e-35 | 130 |
| MsG0780039433.01.T01 | MTR_2g075750 | 56.436 | 101 | 43 | 1 | 106 | 205 | 13 | 113 | 6.52e-34 | 122 |
| MsG0780039433.01.T01 | MTR_2g075610 | 55.340 | 103 | 45 | 1 | 106 | 207 | 14 | 116 | 2.48e-33 | 120 |
| MsG0780039433.01.T01 | MTR_7g117200 | 35.870 | 184 | 89 | 5 | 11 | 180 | 9 | 177 | 1.77e-27 | 108 |
| MsG0780039433.01.T01 | MTR_3g090860 | 33.990 | 203 | 101 | 4 | 9 | 185 | 2 | 197 | 1.85e-26 | 106 |
| MsG0780039433.01.T01 | MTR_8g099350 | 32.828 | 198 | 104 | 5 | 4 | 180 | 2 | 191 | 2.02e-24 | 101 |
| MsG0780039433.01.T01 | MTR_8g027860 | 52.941 | 85 | 32 | 1 | 104 | 180 | 111 | 195 | 2.16e-23 | 98.2 |
| MsG0780039433.01.T01 | MTR_5g067680 | 40.000 | 115 | 63 | 2 | 67 | 180 | 152 | 261 | 1.29e-18 | 84.7 |
| MsG0780039433.01.T01 | MTR_7g028415 | 54.839 | 62 | 25 | 1 | 121 | 182 | 93 | 151 | 7.61e-16 | 73.9 |
| MsG0780039433.01.T01 | MTR_7g028710 | 54.839 | 62 | 25 | 1 | 121 | 182 | 93 | 151 | 7.61e-16 | 73.9 |
| MsG0780039433.01.T01 | MTR_5g073620 | 41.333 | 75 | 43 | 1 | 117 | 190 | 668 | 742 | 5.09e-14 | 72.4 |
| MsG0780039433.01.T01 | MTR_8g092140 | 49.153 | 59 | 27 | 1 | 121 | 179 | 160 | 215 | 1.29e-13 | 68.9 |
| MsG0780039433.01.T01 | MTR_5g043880 | 37.634 | 93 | 54 | 2 | 121 | 212 | 124 | 213 | 1.79e-13 | 69.3 |
| MsG0780039433.01.T01 | MTR_1g086790 | 50.847 | 59 | 26 | 1 | 121 | 179 | 158 | 213 | 2.26e-13 | 69.7 |
| MsG0780039433.01.T01 | MTR_7g079010 | 47.692 | 65 | 29 | 2 | 121 | 183 | 141 | 202 | 2.98e-13 | 67.8 |
| MsG0780039433.01.T01 | MTR_3g095080 | 49.153 | 59 | 27 | 1 | 121 | 179 | 168 | 223 | 4.04e-13 | 67.8 |
| MsG0780039433.01.T01 | MTR_8g028565 | 44.872 | 78 | 39 | 2 | 104 | 179 | 136 | 211 | 5.02e-13 | 68.6 |
| MsG0780039433.01.T01 | MTR_2g088000 | 36.449 | 107 | 65 | 2 | 96 | 202 | 325 | 428 | 5.67e-13 | 69.3 |
| MsG0780039433.01.T01 | MTR_3g095080 | 49.153 | 59 | 27 | 1 | 121 | 179 | 144 | 199 | 5.85e-13 | 67.0 |
| MsG0780039433.01.T01 | MTR_8g096730 | 43.284 | 67 | 35 | 1 | 121 | 187 | 70 | 133 | 6.33e-13 | 65.5 |
| MsG0780039433.01.T01 | MTR_7g109800 | 50.847 | 59 | 26 | 1 | 121 | 179 | 145 | 200 | 6.70e-13 | 67.8 |
| MsG0780039433.01.T01 | MTR_7g110720 | 39.655 | 116 | 66 | 3 | 65 | 178 | 158 | 271 | 8.48e-13 | 68.6 |
| MsG0780039433.01.T01 | MTR_4g049790 | 31.902 | 163 | 89 | 5 | 48 | 206 | 251 | 395 | 1.15e-12 | 68.2 |
| MsG0780039433.01.T01 | MTR_4g094588 | 51.724 | 58 | 25 | 1 | 121 | 178 | 178 | 232 | 1.59e-12 | 67.0 |
| MsG0780039433.01.T01 | MTR_3g053330 | 43.210 | 81 | 44 | 1 | 122 | 202 | 252 | 330 | 2.01e-12 | 67.4 |
| MsG0780039433.01.T01 | MTR_5g091390 | 50.000 | 58 | 26 | 1 | 121 | 178 | 157 | 211 | 2.31e-12 | 66.6 |
| MsG0780039433.01.T01 | MTR_8g007270 | 48.276 | 58 | 27 | 1 | 121 | 178 | 154 | 208 | 7.16e-12 | 63.9 |
| MsG0780039433.01.T01 | MTR_2g033820 | 47.458 | 59 | 28 | 1 | 121 | 179 | 203 | 258 | 9.39e-12 | 65.1 |
| MsG0780039433.01.T01 | MTR_4g122530 | 44.828 | 58 | 29 | 1 | 121 | 178 | 208 | 262 | 1.37e-11 | 64.7 |
| MsG0780039433.01.T01 | MTR_4g082580 | 36.364 | 88 | 53 | 1 | 121 | 208 | 278 | 362 | 1.51e-11 | 64.7 |
| MsG0780039433.01.T01 | MTR_8g087000 | 48.438 | 64 | 31 | 1 | 115 | 178 | 71 | 132 | 1.57e-11 | 63.5 |
| MsG0780039433.01.T01 | MTR_2g032030 | 37.963 | 108 | 53 | 3 | 83 | 178 | 217 | 322 | 1.71e-11 | 64.3 |
| MsG0780039433.01.T01 | MTR_8g087000 | 48.438 | 64 | 31 | 1 | 115 | 178 | 70 | 131 | 1.82e-11 | 63.2 |
| MsG0780039433.01.T01 | MTR_7g110720 | 46.753 | 77 | 36 | 3 | 103 | 178 | 172 | 244 | 2.11e-11 | 64.3 |
| MsG0780039433.01.T01 | MTR_2g032030 | 37.963 | 108 | 53 | 3 | 83 | 178 | 217 | 322 | 2.12e-11 | 64.3 |
| MsG0780039433.01.T01 | MTR_3g104750 | 47.458 | 59 | 28 | 1 | 121 | 179 | 104 | 159 | 2.59e-11 | 61.2 |
| MsG0780039433.01.T01 | MTR_7g062220 | 51.724 | 58 | 25 | 1 | 121 | 178 | 124 | 178 | 2.70e-11 | 63.5 |
| MsG0780039433.01.T01 | MTR_1g015140 | 31.200 | 125 | 70 | 3 | 66 | 179 | 38 | 157 | 3.23e-11 | 60.8 |
| MsG0780039433.01.T01 | MTR_2g023930 | 38.384 | 99 | 50 | 2 | 80 | 178 | 273 | 360 | 3.51e-11 | 63.5 |
| MsG0780039433.01.T01 | MTR_1g009613 | 36.842 | 95 | 56 | 3 | 85 | 178 | 226 | 317 | 5.14e-11 | 62.8 |
| MsG0780039433.01.T01 | MTR_2g016770 | 39.785 | 93 | 52 | 3 | 87 | 178 | 1 | 90 | 9.06e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039433.01.T01 | AT3G56400 | 40.102 | 197 | 92 | 5 | 13 | 196 | 10 | 193 | 4.14e-37 | 133 |
| MsG0780039433.01.T01 | AT2G46400 | 34.715 | 193 | 91 | 6 | 14 | 194 | 8 | 177 | 4.93e-27 | 107 |
| MsG0780039433.01.T01 | AT1G66550 | 32.510 | 243 | 137 | 9 | 13 | 248 | 8 | 230 | 1.57e-26 | 104 |
| MsG0780039433.01.T01 | AT2G40750 | 34.450 | 209 | 105 | 6 | 3 | 180 | 4 | 211 | 5.57e-26 | 105 |
| MsG0780039433.01.T01 | AT1G66550 | 33.500 | 200 | 110 | 6 | 13 | 210 | 8 | 186 | 1.81e-25 | 101 |
| MsG0780039433.01.T01 | AT4G11070 | 34.536 | 194 | 102 | 4 | 11 | 180 | 8 | 200 | 2.93e-24 | 100 |
| MsG0780039433.01.T01 | AT1G66560 | 35.088 | 171 | 96 | 4 | 14 | 183 | 9 | 165 | 7.30e-24 | 97.4 |
| MsG0780039433.01.T01 | AT5G22570 | 31.760 | 233 | 131 | 8 | 13 | 230 | 9 | 228 | 1.45e-23 | 97.4 |
| MsG0780039433.01.T01 | AT5G01900 | 34.637 | 179 | 98 | 4 | 13 | 184 | 7 | 173 | 2.05e-23 | 96.7 |
| MsG0780039433.01.T01 | AT1G66600 | 34.444 | 180 | 87 | 7 | 13 | 183 | 8 | 165 | 3.85e-22 | 92.8 |
| MsG0780039433.01.T01 | AT4G11070 | 36.517 | 178 | 88 | 5 | 11 | 180 | 8 | 168 | 1.42e-21 | 92.0 |
| MsG0780039433.01.T01 | AT2G40740 | 30.890 | 191 | 105 | 5 | 15 | 180 | 44 | 232 | 1.37e-20 | 89.7 |
| MsG0780039433.01.T01 | AT2G40740 | 30.890 | 191 | 105 | 5 | 15 | 180 | 53 | 241 | 1.80e-20 | 89.4 |
| MsG0780039433.01.T01 | AT1G80590 | 29.648 | 199 | 102 | 5 | 12 | 208 | 7 | 169 | 7.00e-20 | 86.7 |
| MsG0780039433.01.T01 | AT4G23810 | 49.412 | 85 | 35 | 1 | 104 | 180 | 133 | 217 | 9.98e-20 | 87.8 |
| MsG0780039433.01.T01 | AT5G24110 | 31.638 | 177 | 106 | 3 | 11 | 185 | 14 | 177 | 1.64e-19 | 86.7 |
| MsG0780039433.01.T01 | AT5G45260 | 40.000 | 105 | 58 | 2 | 79 | 178 | 1161 | 1265 | 1.02e-14 | 74.7 |
| MsG0780039433.01.T01 | AT1G69310 | 36.434 | 129 | 64 | 5 | 68 | 186 | 89 | 209 | 2.29e-14 | 72.0 |
| MsG0780039433.01.T01 | AT1G69310 | 36.434 | 129 | 64 | 5 | 68 | 186 | 89 | 209 | 2.29e-14 | 72.0 |
| MsG0780039433.01.T01 | AT1G69310 | 36.434 | 129 | 64 | 5 | 68 | 186 | 89 | 209 | 2.29e-14 | 72.0 |
| MsG0780039433.01.T01 | AT4G04450 | 37.719 | 114 | 68 | 2 | 90 | 202 | 166 | 277 | 5.82e-14 | 72.0 |
| MsG0780039433.01.T01 | AT4G04450 | 37.719 | 114 | 68 | 2 | 90 | 202 | 260 | 371 | 8.41e-14 | 71.6 |
| MsG0780039433.01.T01 | AT5G13080 | 47.761 | 67 | 32 | 1 | 121 | 187 | 67 | 130 | 1.25e-13 | 67.4 |
| MsG0780039433.01.T01 | AT5G41570 | 49.231 | 65 | 28 | 2 | 121 | 183 | 98 | 159 | 1.72e-13 | 67.8 |
| MsG0780039433.01.T01 | AT5G49520 | 45.455 | 66 | 33 | 1 | 121 | 186 | 221 | 283 | 3.50e-13 | 69.3 |
| MsG0780039433.01.T01 | AT4G18170 | 37.391 | 115 | 56 | 3 | 84 | 185 | 122 | 233 | 7.14e-13 | 68.2 |
| MsG0780039433.01.T01 | AT3G01970 | 50.847 | 59 | 26 | 1 | 121 | 179 | 65 | 120 | 8.68e-13 | 65.1 |
| MsG0780039433.01.T01 | AT1G64000 | 50.000 | 58 | 26 | 1 | 121 | 178 | 114 | 168 | 9.40e-13 | 65.9 |
| MsG0780039433.01.T01 | AT2G34830 | 35.246 | 122 | 65 | 3 | 62 | 178 | 167 | 279 | 1.04e-12 | 68.2 |
| MsG0780039433.01.T01 | AT2G34830 | 35.246 | 122 | 65 | 3 | 62 | 178 | 158 | 270 | 1.06e-12 | 68.2 |
| MsG0780039433.01.T01 | AT2G47260 | 50.847 | 59 | 26 | 1 | 121 | 179 | 174 | 229 | 1.30e-12 | 67.4 |
| MsG0780039433.01.T01 | AT1G29860 | 48.387 | 62 | 29 | 1 | 121 | 182 | 136 | 194 | 1.91e-12 | 66.6 |
| MsG0780039433.01.T01 | AT2G37260 | 46.970 | 66 | 32 | 1 | 121 | 186 | 349 | 411 | 1.94e-12 | 67.4 |
| MsG0780039433.01.T01 | AT5G46350 | 46.154 | 65 | 32 | 1 | 121 | 185 | 183 | 244 | 2.36e-12 | 66.6 |
| MsG0780039433.01.T01 | AT2G37260 | 46.970 | 66 | 32 | 1 | 121 | 186 | 267 | 329 | 2.56e-12 | 66.6 |
| MsG0780039433.01.T01 | AT2G37260 | 46.970 | 66 | 32 | 1 | 121 | 186 | 269 | 331 | 2.58e-12 | 66.6 |
| MsG0780039433.01.T01 | AT2G46130 | 46.552 | 58 | 28 | 1 | 121 | 178 | 30 | 84 | 2.90e-12 | 62.4 |
| MsG0780039433.01.T01 | AT2G44745 | 43.373 | 83 | 42 | 2 | 96 | 178 | 122 | 199 | 2.98e-12 | 65.1 |
| MsG0780039433.01.T01 | AT1G62300 | 48.649 | 74 | 35 | 2 | 106 | 178 | 296 | 367 | 5.38e-12 | 66.2 |
| MsG0780039433.01.T01 | AT4G39410 | 40.964 | 83 | 38 | 3 | 96 | 178 | 206 | 277 | 5.56e-12 | 65.5 |
| MsG0780039433.01.T01 | AT2G23320 | 38.462 | 104 | 53 | 3 | 83 | 178 | 195 | 295 | 1.04e-11 | 64.7 |
| MsG0780039433.01.T01 | AT4G01250 | 36.364 | 110 | 62 | 3 | 71 | 178 | 80 | 183 | 1.24e-11 | 64.3 |
| MsG0780039433.01.T01 | AT1G29280 | 37.500 | 88 | 47 | 2 | 97 | 178 | 44 | 129 | 1.87e-11 | 63.5 |
| MsG0780039433.01.T01 | AT5G52830 | 51.724 | 58 | 26 | 1 | 122 | 179 | 166 | 221 | 2.13e-11 | 63.9 |
| MsG0780039433.01.T01 | AT3G62340 | 50.847 | 59 | 26 | 1 | 121 | 179 | 118 | 173 | 3.60e-11 | 62.8 |
| MsG0780039433.01.T01 | AT4G22070 | 54.386 | 57 | 24 | 1 | 122 | 178 | 298 | 352 | 4.57e-11 | 63.5 |
| MsG0780039433.01.T01 | AT4G22070 | 54.386 | 57 | 24 | 1 | 122 | 178 | 298 | 352 | 4.57e-11 | 63.5 |
| MsG0780039433.01.T01 | AT4G22070 | 54.386 | 57 | 24 | 1 | 122 | 178 | 298 | 352 | 4.57e-11 | 63.5 |
| MsG0780039433.01.T01 | AT4G22070 | 54.386 | 57 | 24 | 1 | 122 | 178 | 298 | 352 | 4.57e-11 | 63.5 |
| MsG0780039433.01.T01 | AT5G26170 | 44.828 | 58 | 29 | 1 | 121 | 178 | 113 | 167 | 4.60e-11 | 60.8 |
| MsG0780039433.01.T01 | AT5G64810 | 30.286 | 175 | 93 | 7 | 38 | 196 | 24 | 185 | 8.06e-11 | 60.5 |
| MsG0780039433.01.T01 | AT2G03340 | 33.000 | 100 | 59 | 3 | 89 | 184 | 214 | 309 | 8.80e-11 | 62.4 |
Find 81 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGGTTGGCTACCTTTAA+TGG | 0.150825 | 7:+64033144 | None:intergenic |
| TTGAAATCTTAGGTAGATTT+TGG | 0.210442 | 7:+64035809 | None:intergenic |
| TTTAAGAAAGAGGCCAATTA+AGG | 0.247289 | 7:+64033364 | None:intergenic |
| GTGGATCCTCTTGAATTCTT+TGG | 0.257451 | 7:+64033712 | None:intergenic |
| TAAGTATCATTCATTGAAAA+TGG | 0.278557 | 7:+64032969 | None:intergenic |
| CACCAAATCTGAAGACTCTT+TGG | 0.292085 | 7:-64035539 | MsG0780039433.01.T01:CDS |
| GTTGGTTGGCTACCTTTAAT+GGG | 0.301437 | 7:+64033145 | None:intergenic |
| CATACATGATATCAGAAATA+TGG | 0.313913 | 7:+64033394 | None:intergenic |
| TTCCAAAGAGTCTTCAGATT+TGG | 0.321094 | 7:+64035537 | None:intergenic |
| CTTCACAAGACCACCTATTC+TGG | 0.322872 | 7:-64033687 | MsG0780039433.01.T01:CDS |
| GGTTATTGTTCAAGAACAAT+AGG | 0.331883 | 7:+64035590 | None:intergenic |
| TGATTTGCAGGAACTATTAC+AGG | 0.348849 | 7:-64033779 | MsG0780039433.01.T01:intron |
| TGTATGATGATGTCCTTAAT+TGG | 0.354460 | 7:-64033377 | MsG0780039433.01.T01:CDS |
| TTGCAAGAGTTCCATTGTTA+AGG | 0.357033 | 7:-64035509 | MsG0780039433.01.T01:CDS |
| ACTAATCTCAATCGAAAATC+TGG | 0.363566 | 7:+64033123 | None:intergenic |
| ATATATATACCTTGGAAAAT+CGG | 0.379995 | 7:+64034636 | None:intergenic |
| AGAAAGGTGAGACCCATTAA+AGG | 0.392937 | 7:-64033157 | MsG0780039433.01.T01:three_prime_UTR |
| ATGCTTGTATTCATCATGTA+AGG | 0.393760 | 7:-64033203 | MsG0780039433.01.T01:three_prime_UTR |
| GGTCATCAGTGGAGAAAGTA+TGG | 0.398881 | 7:-64034679 | MsG0780039433.01.T01:CDS |
| TGATGAATACAAGCATAGTT+TGG | 0.400205 | 7:+64033210 | None:intergenic |
| CATTCAGAATATTTCTAAGT+TGG | 0.405861 | 7:+64035701 | None:intergenic |
| CCTTCAAATGATTACCTCTC+TGG | 0.419974 | 7:-64033489 | MsG0780039433.01.T01:CDS |
| GAATAATCCACTATGATCTC+AGG | 0.420288 | 7:+64033636 | None:intergenic |
| CTCGGGAGGTTAGATAAATA+TGG | 0.426312 | 7:-64033038 | MsG0780039433.01.T01:three_prime_UTR |
| GTTATTGTTCAAGAACAATA+GGG | 0.426826 | 7:+64035591 | None:intergenic |
| GTAGTTGATGAGTTGTTAAG+AGG | 0.428242 | 7:-64035739 | MsG0780039433.01.T01:CDS |
| CAGTCTTGTTTGGCTGGTGT+TGG | 0.428837 | 7:+64033570 | None:intergenic |
| GAGAAAAGGACAGTCTTGTT+TGG | 0.431212 | 7:+64033560 | None:intergenic |
| CACTGATGACCATCTTCCTC+AGG | 0.442178 | 7:+64034691 | None:intergenic |
| AGTCTTGTTTGGCTGGTGTT+GGG | 0.452762 | 7:+64033571 | None:intergenic |
| AAAGGAGGAGTGCAAGGAAG+AGG | 0.462606 | 7:-64033529 | MsG0780039433.01.T01:CDS |
| CCAGAGAGGTAATCATTTGA+AGG | 0.464626 | 7:+64033489 | None:intergenic |
| ACAAGTATGATGGCCAGAAT+AGG | 0.467595 | 7:+64033674 | None:intergenic |
| AAAGGACAGTCTTGTTTGGC+TGG | 0.470880 | 7:+64033564 | None:intergenic |
| TAATCATTTGAAGGAGGAGG+AGG | 0.475507 | 7:+64033498 | None:intergenic |
| AATCTAGCTCATGGTGGCCG+TGG | 0.480166 | 7:-64035766 | MsG0780039433.01.T01:CDS |
| AGAAATATTCTGAATGAAAG+TGG | 0.485810 | 7:-64035694 | MsG0780039433.01.T01:CDS |
| AATCAGATCCCTCCGAAGTA+GGG | 0.492030 | 7:+64035569 | None:intergenic |
| AAATCAGATCCCTCCGAAGT+AGG | 0.493350 | 7:+64035568 | None:intergenic |
| AGGTAATCATTTGAAGGAGG+AGG | 0.500051 | 7:+64033495 | None:intergenic |
| GGTTTCATGTTTGAACTCGA+TGG | 0.511813 | 7:-64033182 | MsG0780039433.01.T01:three_prime_UTR |
| CTTGATTCTCATGATCACTT+AGG | 0.514163 | 7:-64033420 | MsG0780039433.01.T01:CDS |
| CAATCGAAAATCTGGTTGGT+TGG | 0.529763 | 7:+64033131 | None:intergenic |
| GAACAATAGGGAATTAGTAA+AGG | 0.532955 | 7:+64035603 | None:intergenic |
| GAAGAGGCTGTTACAAAAGA+AGG | 0.533769 | 7:-64035483 | MsG0780039433.01.T01:intron |
| GGTGATATTGATAATAATGA+TGG | 0.535663 | 7:-64035673 | MsG0780039433.01.T01:CDS |
| TCGGAGCAGCCTGAGGAAGA+TGG | 0.538270 | 7:-64034700 | MsG0780039433.01.T01:CDS |
| TTTGAACTCGATGGATAGAA+AGG | 0.540931 | 7:-64033173 | MsG0780039433.01.T01:three_prime_UTR |
| ATCTCAATCGAAAATCTGGT+TGG | 0.548129 | 7:+64033127 | None:intergenic |
| AGCTCATGGTGGCCGTGGAA+AGG | 0.548511 | 7:-64035761 | MsG0780039433.01.T01:CDS |
| GGAAATGAAAATCTAGCTCA+TGG | 0.549115 | 7:-64035775 | MsG0780039433.01.T01:CDS |
| ATTGCGTAACAAGGTTATGT+TGG | 0.551540 | 7:-64033241 | MsG0780039433.01.T01:three_prime_UTR |
| AACAATAACCCTACTTCGGA+GGG | 0.555672 | 7:-64035577 | MsG0780039433.01.T01:CDS |
| GCCTCTTCGTTCCTTAACAA+TGG | 0.560157 | 7:+64035498 | None:intergenic |
| CAATAGGGAATTAGTAAAGG+TGG | 0.561256 | 7:+64035606 | None:intergenic |
| TGCACTCACAAACATGATCA+AGG | 0.563442 | 7:-64033756 | MsG0780039433.01.T01:CDS |
| CTTGAACAATAACCCTACTT+CGG | 0.567689 | 7:-64035581 | MsG0780039433.01.T01:CDS |
| TGATATTTGCATCAATAACA+TGG | 0.571810 | 7:-64033085 | MsG0780039433.01.T01:three_prime_UTR |
| TTGCGCATCATTGCGTAACA+AGG | 0.573406 | 7:-64033250 | MsG0780039433.01.T01:three_prime_UTR |
| ACAAGTCCAAAGAATTCAAG+AGG | 0.583618 | 7:-64033718 | MsG0780039433.01.T01:CDS |
| CACTCTAAGAAAACAAAGGA+TGG | 0.587211 | 7:+64033309 | None:intergenic |
| GAACAATAACCCTACTTCGG+AGG | 0.592529 | 7:-64035578 | MsG0780039433.01.T01:CDS |
| AATTTCACAAACATGGGAGA+AGG | 0.598123 | 7:-64034725 | MsG0780039433.01.T01:CDS |
| TAGGTGGTCTTGTGAAGAGG+TGG | 0.603726 | 7:+64033693 | None:intergenic |
| GAAGGAGTCGGAGCAGCCTG+AGG | 0.605036 | 7:-64034707 | MsG0780039433.01.T01:CDS |
| GCAAAACCCTGAGATCATAG+TGG | 0.609874 | 7:-64033643 | MsG0780039433.01.T01:CDS |
| ACAAACATGGGAGAAGGAGT+CGG | 0.610498 | 7:-64034719 | MsG0780039433.01.T01:CDS |
| GAATAGGTGGTCTTGTGAAG+AGG | 0.611087 | 7:+64033690 | None:intergenic |
| AATAATCCACTATGATCTCA+GGG | 0.616679 | 7:+64033637 | None:intergenic |
| AGTATGATGGCCAGAATAGG+TGG | 0.622911 | 7:+64033677 | None:intergenic |
| AGATTGTGGAAGATGTAACT+CGG | 0.627580 | 7:-64033056 | MsG0780039433.01.T01:three_prime_UTR |
| GATTGTGGAAGATGTAACTC+GGG | 0.631128 | 7:-64033055 | MsG0780039433.01.T01:three_prime_UTR |
| GTTGTCAAAACTAAGAAACA+TGG | 0.631802 | 7:+64033599 | None:intergenic |
| GAGAGGTAATCATTTGAAGG+AGG | 0.645608 | 7:+64033492 | None:intergenic |
| TCCATTGTTAAGGAACGAAG+AGG | 0.645691 | 7:-64035499 | MsG0780039433.01.T01:CDS |
| ACTCATCAACTACCTTTCCA+CGG | 0.650310 | 7:+64035749 | None:intergenic |
| AACACACTCTAAGAAAACAA+AGG | 0.662230 | 7:+64033305 | None:intergenic |
| CTGAGGAAGATGGTCATCAG+TGG | 0.675639 | 7:-64034690 | MsG0780039433.01.T01:CDS |
| TGTGGAAGATGTAACTCGGG+AGG | 0.676675 | 7:-64033052 | MsG0780039433.01.T01:three_prime_UTR |
| CATCAAAAGTTAGTCCAGAG+AGG | 0.687787 | 7:+64033475 | None:intergenic |
| AATGAAAATCTAGCTCATGG+TGG | 0.743865 | 7:-64035772 | MsG0780039433.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTATTATTATTATTT+TGG | - | Chr7:64033714-64033733 | MsG0780039433.01.T01:CDS | 0.0% |
| !! | CATAATAAATATATTCATTT+AGG | + | Chr7:64034951-64034970 | None:intergenic | 10.0% |
| !!! | ATAATAACAAAAGTATTAAT+TGG | + | Chr7:64033678-64033697 | None:intergenic | 10.0% |
| !!! | GTGTATTTTTTTTTTTTTTT+TGG | - | Chr7:64035814-64035833 | MsG0780039433.01.T01:five_prime_UTR | 10.0% |
| !!! | TTACTATATAGTTTTTTTTT+AGG | - | Chr7:64033488-64033507 | MsG0780039433.01.T01:CDS | 10.0% |
| !! | AATTAATTTATTAGCATCTT+AGG | - | Chr7:64034720-64034739 | MsG0780039433.01.T01:CDS | 15.0% |
| !! | ATCATTTAGGTATTAATTTA+AGG | - | Chr7:64034493-64034512 | MsG0780039433.01.T01:intron | 15.0% |
| !! | ATTAATTTATTAGCATCTTA+GGG | - | Chr7:64034721-64034740 | MsG0780039433.01.T01:CDS | 15.0% |
| !! | GTTAGTTAATTTATTGAATT+AGG | + | Chr7:64034228-64034247 | None:intergenic | 15.0% |
| !! | TTCTTAGAAAAAAAAAAAGA+AGG | + | Chr7:64033530-64033549 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTTTTTTTTGAAG+AGG | + | Chr7:64034851-64034870 | None:intergenic | 15.0% |
| !!! | ATAATCAAATTTTAAGAAAG+AGG | + | Chr7:64035399-64035418 | None:intergenic | 15.0% |
| !!! | TCTAAGAAAATGTTTTATTT+TGG | - | Chr7:64033542-64033561 | MsG0780039433.01.T01:CDS | 15.0% |
| !!! | TGTTTTGAAAATTAATTAAC+CGG | + | Chr7:64034606-64034625 | None:intergenic | 15.0% |
| !!! | TTTCTAAAGTTTGTTAATTA+TGG | - | Chr7:64033861-64033880 | MsG0780039433.01.T01:intron | 15.0% |
| !! | AAATGTGGATATAGATATAT+TGG | + | Chr7:64033444-64033463 | None:intergenic | 20.0% |
| !! | AAGATTTCAAAACCAAAAAT+GGG | - | Chr7:64032954-64032973 | MsG0780039433.01.T01:three_prime_UTR | 20.0% |
| !! | AATGTGGATATAGATATATT+GGG | + | Chr7:64033443-64033462 | None:intergenic | 20.0% |
| !! | ATATATATACCTTGGAAAAT+CGG | + | Chr7:64034117-64034136 | None:intergenic | 20.0% |
| !! | TAAGATTTCAAAACCAAAAA+TGG | - | Chr7:64032953-64032972 | MsG0780039433.01.T01:three_prime_UTR | 20.0% |
| !! | TAAGTATCATTCATTGAAAA+TGG | + | Chr7:64035784-64035803 | None:intergenic | 20.0% |
| !! | TACATTAGTCAATAAATAAG+TGG | + | Chr7:64033583-64033602 | None:intergenic | 20.0% |
| !! | TCGTATAAATATATATACCT+TGG | + | Chr7:64034125-64034144 | None:intergenic | 20.0% |
| !!! | ATATATTTTTTCAAACACAC+TGG | - | Chr7:64033394-64033413 | MsG0780039433.01.T01:CDS | 20.0% |
| !!! | ATATTTATTATGTGATTTGC+AGG | - | Chr7:64034959-64034978 | MsG0780039433.01.T01:intron | 20.0% |
| !!! | ATTTTTGGTTTTGAAATCTT+AGG | + | Chr7:64032954-64032973 | None:intergenic | 20.0% |
| !!! | GATTAAATCTTATTTACCAA+AGG | + | Chr7:64034432-64034451 | None:intergenic | 20.0% |
| !!! | TATTGATCAATAAGAAGTAT+AGG | + | Chr7:64034908-64034927 | None:intergenic | 20.0% |
| !!! | TTCACTTATATTTGAACTTT+TGG | - | Chr7:64033605-64033624 | MsG0780039433.01.T01:CDS | 20.0% |
| ! | AAAAGAAGTCAACTCTTAAA+TGG | + | Chr7:64033371-64033390 | None:intergenic | 25.0% |
| ! | AAACGAGCAAATTAATTAAG+AGG | + | Chr7:64033844-64033863 | None:intergenic | 25.0% |
| ! | AAATTGTAGATGTAGAAATG+TGG | + | Chr7:64033459-64033478 | None:intergenic | 25.0% |
| ! | AAGGACTATGTTATATGATT+AGG | - | Chr7:64033813-64033832 | MsG0780039433.01.T01:intron | 25.0% |
| ! | AATATATCTCTTCTATGCTA+TGG | - | Chr7:64034924-64034943 | MsG0780039433.01.T01:intron | 25.0% |
| ! | ACAGAAAAATTTCACAAACA+TGG | - | Chr7:64034018-64034037 | MsG0780039433.01.T01:intron | 25.0% |
| ! | AGAAATATTCTGAATGAAAG+TGG | - | Chr7:64033056-64033075 | MsG0780039433.01.T01:three_prime_UTR | 25.0% |
| ! | ATATATCTCTTCTATGCTAT+GGG | - | Chr7:64034925-64034944 | MsG0780039433.01.T01:intron | 25.0% |
| ! | ATGATGAACAATAATTGATG+GGG | + | Chr7:64033788-64033807 | None:intergenic | 25.0% |
| ! | CACACATATATATCATTTCT+TGG | - | Chr7:64033936-64033955 | MsG0780039433.01.T01:intron | 25.0% |
| ! | CAGAAAAATTTCACAAACAT+GGG | - | Chr7:64034019-64034038 | MsG0780039433.01.T01:intron | 25.0% |
| ! | CATACATGATATCAGAAATA+TGG | + | Chr7:64035359-64035378 | None:intergenic | 25.0% |
| ! | CCAATATTACTCATATGTAA+AGG | + | Chr7:64033764-64033783 | None:intergenic | 25.0% |
| ! | CCTTTACATATGAGTAATAT+TGG | - | Chr7:64033761-64033780 | MsG0780039433.01.T01:CDS | 25.0% |
| ! | GATGATGAACAATAATTGAT+GGG | + | Chr7:64033789-64033808 | None:intergenic | 25.0% |
| ! | GTTATTGTTCAAGAACAATA+GGG | + | Chr7:64033162-64033181 | None:intergenic | 25.0% |
| ! | TAACATGGTTAAAAAGATTG+TGG | - | Chr7:64035680-64035699 | MsG0780039433.01.T01:CDS | 25.0% |
| ! | TAATTGAATGACCTTGTAAA+AGG | + | Chr7:64034559-64034578 | None:intergenic | 25.0% |
| ! | TGATATTTGCATCAATAACA+TGG | - | Chr7:64035665-64035684 | MsG0780039433.01.T01:CDS | 25.0% |
| ! | TTATTGTTCATCATCATTGA+AGG | - | Chr7:64033794-64033813 | MsG0780039433.01.T01:intron | 25.0% |
| !! | AGATTTTCATTTCCCATTTT+TGG | + | Chr7:64032969-64032988 | None:intergenic | 25.0% |
| !! | CATTCAGAATATTTCTAAGT+TGG | + | Chr7:64033052-64033071 | None:intergenic | 25.0% |
| !! | GGTGATATTGATAATAATGA+TGG | - | Chr7:64033077-64033096 | MsG0780039433.01.T01:three_prime_UTR | 25.0% |
| !! | TATATTTGAACTTTTGGATG+AGG | - | Chr7:64033611-64033630 | MsG0780039433.01.T01:CDS | 25.0% |
| !! | TGATGATGAACAATAATTGA+TGG | + | Chr7:64033790-64033809 | None:intergenic | 25.0% |
| !! | TTCAAAAGATTTTCAGCAAA+TGG | + | Chr7:64033113-64033132 | None:intergenic | 25.0% |
| !! | TTGAAATCTTAGGTAGATTT+TGG | + | Chr7:64032944-64032963 | None:intergenic | 25.0% |
| !!! | ATTTGCTGAAAATCTTTTGA+AGG | - | Chr7:64033112-64033131 | MsG0780039433.01.T01:three_prime_UTR | 25.0% |
| !!! | GAGTTTTTTTTTGTTACAGT+TGG | - | Chr7:64033961-64033980 | MsG0780039433.01.T01:intron | 25.0% |
| !!! | TAGAAACTCCCTTTTAAAAA+TGG | + | Chr7:64034165-64034184 | None:intergenic | 25.0% |
| AATAATCCACTATGATCTCA+GGG | + | Chr7:64035116-64035135 | None:intergenic | 30.0% | |
| ACTAATCTCAATCGAAAATC+TGG | + | Chr7:64035630-64035649 | None:intergenic | 30.0% | |
| ATAGATATATTGGGAGAGTA+AGG | + | Chr7:64033434-64033453 | None:intergenic | 30.0% | |
| ATGCTTGTATTCATCATGTA+AGG | - | Chr7:64035547-64035566 | MsG0780039433.01.T01:CDS | 30.0% | |
| GAACAATAGGGAATTAGTAA+AGG | + | Chr7:64033150-64033169 | None:intergenic | 30.0% | |
| GGACAAACAATAACAAAGTA+TGG | + | Chr7:64033743-64033762 | None:intergenic | 30.0% | |
| GGTTATTGTTCAAGAACAAT+AGG | + | Chr7:64033163-64033182 | None:intergenic | 30.0% | |
| GTTGTCAAAACTAAGAAACA+TGG | + | Chr7:64035154-64035173 | None:intergenic | 30.0% | |
| TAGATATATTGGGAGAGTAA+GGG | + | Chr7:64033433-64033452 | None:intergenic | 30.0% | |
| TGATGAATACAAGCATAGTT+TGG | + | Chr7:64035543-64035562 | None:intergenic | 30.0% | |
| TGATGTTCAAACTATGTTGA+AGG | - | Chr7:64034796-64034815 | MsG0780039433.01.T01:intron | 30.0% | |
| TTTAAGAAAGAGGCCAATTA+AGG | + | Chr7:64035389-64035408 | None:intergenic | 30.0% | |
| ! | AACACACTCTAAGAAAACAA+AGG | + | Chr7:64035448-64035467 | None:intergenic | 30.0% |
| ! | CTTACAAATGACCTTTTACA+AGG | - | Chr7:64034545-64034564 | MsG0780039433.01.T01:intron | 30.0% |
| ! | GCAAGATTTTACAAGTATGA+TGG | + | Chr7:64035089-64035108 | None:intergenic | 30.0% |
| ! | TGTATGATGATGTCCTTAAT+TGG | - | Chr7:64035373-64035392 | MsG0780039433.01.T01:intron | 30.0% |
| !! | AACTTTTGATGATCCAGAAA+AGG | - | Chr7:64035287-64035306 | MsG0780039433.01.T01:intron | 30.0% |
| !! | CCTTTTAAAAATGGTTTGTG+CGG | + | Chr7:64034156-64034175 | None:intergenic | 30.0% |
| !! | CGCACAAACCATTTTTAAAA+GGG | - | Chr7:64034154-64034173 | MsG0780039433.01.T01:intron | 30.0% |
| !! | TTTTATTTCATCGACACCTT+TGG | - | Chr7:64034413-64034432 | MsG0780039433.01.T01:intron | 30.0% |
| !! | TTTTTCAAACACACTGGTTA+GGG | - | Chr7:64033400-64033419 | MsG0780039433.01.T01:CDS | 30.0% |
| !!! | TTTTTTCAAACACACTGGTT+AGG | - | Chr7:64033399-64033418 | MsG0780039433.01.T01:CDS | 30.0% |
| AATTTCACAAACATGGGAGA+AGG | - | Chr7:64034025-64034044 | MsG0780039433.01.T01:intron | 35.0% | |
| ACAAGTCCAAAGAATTCAAG+AGG | - | Chr7:64035032-64035051 | MsG0780039433.01.T01:intron | 35.0% | |
| AGATTGTGGAAGATGTAACT+CGG | - | Chr7:64035694-64035713 | MsG0780039433.01.T01:CDS | 35.0% | |
| ATCTCAATCGAAAATCTGGT+TGG | + | Chr7:64035626-64035645 | None:intergenic | 35.0% | |
| ATTGCGTAACAAGGTTATGT+TGG | - | Chr7:64035509-64035528 | MsG0780039433.01.T01:CDS | 35.0% | |
| CAATAGGGAATTAGTAAAGG+TGG | + | Chr7:64033147-64033166 | None:intergenic | 35.0% | |
| CACTATTTGTACAGATTGTC+CGG | - | Chr7:64034584-64034603 | MsG0780039433.01.T01:intron | 35.0% | |
| CTTGAACAATAACCCTACTT+CGG | - | Chr7:64033169-64033188 | MsG0780039433.01.T01:three_prime_UTR | 35.0% | |
| CTTGATTCTCATGATCACTT+AGG | - | Chr7:64035330-64035349 | MsG0780039433.01.T01:intron | 35.0% | |
| GAATAATCCACTATGATCTC+AGG | + | Chr7:64035117-64035136 | None:intergenic | 35.0% | |
| TTCCAAAGAGTCTTCAGATT+TGG | + | Chr7:64033216-64033235 | None:intergenic | 35.0% | |
| TTGAGTAGGTCAAGTGATTT+AGG | - | Chr7:64034744-64034763 | MsG0780039433.01.T01:intron | 35.0% | |
| TTGCAAGAGTTCCATTGTTA+AGG | - | Chr7:64033241-64033260 | MsG0780039433.01.T01:three_prime_UTR | 35.0% | |
| TTTGAACTCGATGGATAGAA+AGG | - | Chr7:64035577-64035596 | MsG0780039433.01.T01:CDS | 35.0% | |
| ! | AATGAAAATCTAGCTCATGG+TGG | - | Chr7:64032978-64032997 | MsG0780039433.01.T01:three_prime_UTR | 35.0% |
| ! | CACTCTAAGAAAACAAAGGA+TGG | + | Chr7:64035444-64035463 | None:intergenic | 35.0% |
| ! | GGAAATGAAAATCTAGCTCA+TGG | - | Chr7:64032975-64032994 | MsG0780039433.01.T01:three_prime_UTR | 35.0% |
| ! | TGATTTGCAGGAACTATTAC+AGG | - | Chr7:64034971-64034990 | MsG0780039433.01.T01:intron | 35.0% |
| ! | TTGTTAATTATGGACTGAGC+TGG | - | Chr7:64033871-64033890 | MsG0780039433.01.T01:intron | 35.0% |
| !! | CCGCACAAACCATTTTTAAA+AGG | - | Chr7:64034153-64034172 | MsG0780039433.01.T01:intron | 35.0% |
| !! | GTAGTTGATGAGTTGTTAAG+AGG | - | Chr7:64033011-64033030 | MsG0780039433.01.T01:three_prime_UTR | 35.0% |
| AACAATAACCCTACTTCGGA+GGG | - | Chr7:64033173-64033192 | MsG0780039433.01.T01:three_prime_UTR | 40.0% | |
| ACAAGTATGATGGCCAGAAT+AGG | + | Chr7:64035079-64035098 | None:intergenic | 40.0% | |
| ACTCATCAACTACCTTTCCA+CGG | + | Chr7:64033004-64033023 | None:intergenic | 40.0% | |
| AGAAAGGTGAGACCCATTAA+AGG | - | Chr7:64035593-64035612 | MsG0780039433.01.T01:CDS | 40.0% | |
| AGGTAATCATTTGAAGGAGG+AGG | + | Chr7:64035258-64035277 | None:intergenic | 40.0% | |
| CAATCGAAAATCTGGTTGGT+TGG | + | Chr7:64035622-64035641 | None:intergenic | 40.0% | |
| CACCAAATCTGAAGACTCTT+TGG | - | Chr7:64033211-64033230 | MsG0780039433.01.T01:three_prime_UTR | 40.0% | |
| CATCAAAAGTTAGTCCAGAG+AGG | + | Chr7:64035278-64035297 | None:intergenic | 40.0% | |
| CCAGAGAGGTAATCATTTGA+AGG | + | Chr7:64035264-64035283 | None:intergenic | 40.0% | |
| CCTTCAAATGATTACCTCTC+TGG | - | Chr7:64035261-64035280 | MsG0780039433.01.T01:intron | 40.0% | |
| CTCGGGAGGTTAGATAAATA+TGG | - | Chr7:64035712-64035731 | MsG0780039433.01.T01:CDS | 40.0% | |
| GAAGAGGCTGTTACAAAAGA+AGG | - | Chr7:64033267-64033286 | MsG0780039433.01.T01:three_prime_UTR | 40.0% | |
| GAGAGGTAATCATTTGAAGG+AGG | + | Chr7:64035261-64035280 | None:intergenic | 40.0% | |
| GATTGTGGAAGATGTAACTC+GGG | - | Chr7:64035695-64035714 | MsG0780039433.01.T01:CDS | 40.0% | |
| GGTCAAGTGATTTAGGTCAA+AGG | - | Chr7:64034751-64034770 | MsG0780039433.01.T01:intron | 40.0% | |
| GGTTTCATGTTTGAACTCGA+TGG | - | Chr7:64035568-64035587 | MsG0780039433.01.T01:CDS | 40.0% | |
| GTGGATCCTCTTGAATTCTT+TGG | + | Chr7:64035041-64035060 | None:intergenic | 40.0% | |
| TAATCATTTGAAGGAGGAGG+AGG | + | Chr7:64035255-64035274 | None:intergenic | 40.0% | |
| TCCATTGTTAAGGAACGAAG+AGG | - | Chr7:64033251-64033270 | MsG0780039433.01.T01:three_prime_UTR | 40.0% | |
| TGCACTCACAAACATGATCA+AGG | - | Chr7:64034994-64035013 | MsG0780039433.01.T01:intron | 40.0% | |
| TTAGCATCTTAGGGTTGAGT+AGG | - | Chr7:64034730-64034749 | MsG0780039433.01.T01:CDS | 40.0% | |
| ! | ACAAGACTGTCCTTTTCTCT+CGG | - | Chr7:64035194-64035213 | MsG0780039433.01.T01:intron | 40.0% |
| ! | GTTGGTTGGCTACCTTTAAT+GGG | + | Chr7:64035608-64035627 | None:intergenic | 40.0% |
| ! | TCCTTTTCTCTCGGTGAAAA+AGG | - | Chr7:64035203-64035222 | MsG0780039433.01.T01:intron | 40.0% |
| ! | TTTTCTCTCGGTGAAAAAGG+AGG | - | Chr7:64035206-64035225 | MsG0780039433.01.T01:intron | 40.0% |
| !! | GAGAAAAGGACAGTCTTGTT+TGG | + | Chr7:64035193-64035212 | None:intergenic | 40.0% |
| !! | TCCTTTTTCACCGAGAGAAA+AGG | + | Chr7:64035207-64035226 | None:intergenic | 40.0% |
| !!! | CGGTGTGCAAGATCTTTTTT+TGG | + | Chr7:64034097-64034116 | None:intergenic | 40.0% |
| AAATCAGATCCCTCCGAAGT+AGG | + | Chr7:64033185-64033204 | None:intergenic | 45.0% | |
| AATCAGATCCCTCCGAAGTA+GGG | + | Chr7:64033184-64033203 | None:intergenic | 45.0% | |
| ACAAACATGGGAGAAGGAGT+CGG | - | Chr7:64034031-64034050 | MsG0780039433.01.T01:intron | 45.0% | |
| AGTATGATGGCCAGAATAGG+TGG | + | Chr7:64035076-64035095 | None:intergenic | 45.0% | |
| CTTCACAAGACCACCTATTC+TGG | - | Chr7:64035063-64035082 | MsG0780039433.01.T01:intron | 45.0% | |
| GAACAATAACCCTACTTCGG+AGG | - | Chr7:64033172-64033191 | MsG0780039433.01.T01:three_prime_UTR | 45.0% | |
| GCAAAACCCTGAGATCATAG+TGG | - | Chr7:64035107-64035126 | MsG0780039433.01.T01:intron | 45.0% | |
| GCCTCTTCGTTCCTTAACAA+TGG | + | Chr7:64033255-64033274 | None:intergenic | 45.0% | |
| GGTCATCAGTGGAGAAAGTA+TGG | - | Chr7:64034071-64034090 | MsG0780039433.01.T01:intron | 45.0% | |
| TTGCGCATCATTGCGTAACA+AGG | - | Chr7:64035500-64035519 | MsG0780039433.01.T01:CDS | 45.0% | |
| ! | GCTAGTGTGACATCCTTTTC+TGG | + | Chr7:64035303-64035322 | None:intergenic | 45.0% |
| ! | GGTTGGTTGGCTACCTTTAA+TGG | + | Chr7:64035609-64035628 | None:intergenic | 45.0% |
| !! | AAAGGACAGTCTTGTTTGGC+TGG | + | Chr7:64035189-64035208 | None:intergenic | 45.0% |
| !! | AGTCTTGTTTGGCTGGTGTT+GGG | + | Chr7:64035182-64035201 | None:intergenic | 45.0% |
| !! | GAATAGGTGGTCTTGTGAAG+AGG | + | Chr7:64035063-64035082 | None:intergenic | 45.0% |
| !!! | TCTTGCACACCGATTTTCCA+AGG | - | Chr7:64034105-64034124 | MsG0780039433.01.T01:intron | 45.0% |
| !!! | AAAATATATTTTTACATAAT+TGG | + | Chr7:64035753-64035772 | None:intergenic | 5.0% |
| !!! | TGTATTTTTTTTTTTTTTTT+GGG | - | Chr7:64035815-64035834 | MsG0780039433.01.T01:five_prime_UTR | 5.0% |
| !!! | TTTTAAAAAAAAAATCATTT+AGG | - | Chr7:64034480-64034499 | MsG0780039433.01.T01:intron | 5.0% |
| CACTGATGACCATCTTCCTC+AGG | + | Chr7:64034062-64034081 | None:intergenic | 50.0% | |
| CTGAGGAAGATGGTCATCAG+TGG | - | Chr7:64034060-64034079 | MsG0780039433.01.T01:intron | 50.0% | |
| TGTGGAAGATGTAACTCGGG+AGG | - | Chr7:64035698-64035717 | MsG0780039433.01.T01:CDS | 50.0% | |
| ! | AAAGGAGGAGTGCAAGGAAG+AGG | - | Chr7:64035221-64035240 | MsG0780039433.01.T01:intron | 50.0% |
| ! | GGTGAAAAAGGAGGAGTGCA+AGG | - | Chr7:64035215-64035234 | MsG0780039433.01.T01:intron | 50.0% |
| !! | CAGTCTTGTTTGGCTGGTGT+TGG | + | Chr7:64035183-64035202 | None:intergenic | 50.0% |
| !! | TAGGTGGTCTTGTGAAGAGG+TGG | + | Chr7:64035060-64035079 | None:intergenic | 50.0% |
| ! | AATCTAGCTCATGGTGGCCG+TGG | - | Chr7:64032984-64033003 | MsG0780039433.01.T01:three_prime_UTR | 55.0% |
| AGCTCATGGTGGCCGTGGAA+AGG | - | Chr7:64032989-64033008 | MsG0780039433.01.T01:three_prime_UTR | 60.0% | |
| TCGGAGCAGCCTGAGGAAGA+TGG | - | Chr7:64034050-64034069 | MsG0780039433.01.T01:intron | 60.0% | |
| GAAGGAGTCGGAGCAGCCTG+AGG | - | Chr7:64034043-64034062 | MsG0780039433.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 64032902 | 64035870 | 64032902 | ID=MsG0780039433.01;Name=MsG0780039433.01 |
| Chr7 | mRNA | 64032902 | 64035870 | 64032902 | ID=MsG0780039433.01.T01;Parent=MsG0780039433.01;Name=MsG0780039433.01.T01;_AED=0.47;_eAED=0.47;_QI=70|1|1|1|1|1|3|463|282 |
| Chr7 | exon | 64035484 | 64035870 | 64035484 | ID=MsG0780039433.01.T01:exon:15846;Parent=MsG0780039433.01.T01 |
| Chr7 | exon | 64034646 | 64034750 | 64034646 | ID=MsG0780039433.01.T01:exon:15847;Parent=MsG0780039433.01.T01 |
| Chr7 | exon | 64032902 | 64033791 | 64032902 | ID=MsG0780039433.01.T01:exon:15848;Parent=MsG0780039433.01.T01 |
| Chr7 | five_prime_UTR | 64035801 | 64035870 | 64035801 | ID=MsG0780039433.01.T01:five_prime_utr;Parent=MsG0780039433.01.T01 |
| Chr7 | CDS | 64035484 | 64035800 | 64035484 | ID=MsG0780039433.01.T01:cds;Parent=MsG0780039433.01.T01 |
| Chr7 | CDS | 64034646 | 64034750 | 64034646 | ID=MsG0780039433.01.T01:cds;Parent=MsG0780039433.01.T01 |
| Chr7 | CDS | 64033365 | 64033791 | 64033365 | ID=MsG0780039433.01.T01:cds;Parent=MsG0780039433.01.T01 |
| Chr7 | three_prime_UTR | 64032902 | 64033364 | 64032902 | ID=MsG0780039433.01.T01:three_prime_utr;Parent=MsG0780039433.01.T01 |
| Gene Sequence |
| Protein sequence |
