AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000665.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000665.01.T01 MTR_1g010120 74.066 455 5 5 2 346 25 476 0.0 622
MsG0180000665.01.T01 MTR_3g108600 54.725 455 73 6 2 345 30 462 3.21e-154 441
MsG0180000665.01.T01 MTR_4g124440 44.573 433 126 7 1 322 26 455 6.76e-106 319
MsG0180000665.01.T01 MTR_1g053320 39.565 460 159 7 3 343 27 486 7.61e-105 316
MsG0180000665.01.T01 MTR_4g112025 40.000 460 157 7 2 345 30 486 2.77e-102 311
MsG0180000665.01.T01 MTR_6g032820 44.952 416 111 6 2 302 25 437 3.85e-102 308
MsG0180000665.01.T01 MTR_8g092070 42.750 400 146 4 24 340 83 482 4.33e-100 307
MsG0180000665.01.T01 MTR_7g085390 41.447 456 149 6 2 345 25 474 8.89e-100 303
MsG0180000665.01.T01 MTR_3g095050 42.239 393 146 5 24 336 82 473 4.94e-99 301
MsG0180000665.01.T01 MTR_2g027560 40.559 429 142 7 4 322 29 454 1.81e-94 290
MsG0180000665.01.T01 MTR_4g134280 42.582 364 126 4 63 345 2 363 9.36e-87 266
MsG0180000665.01.T01 MTR_3g031770 33.636 440 176 9 4 335 28 459 2.19e-67 220
MsG0180000665.01.T01 MTR_4g069940 29.067 375 170 12 35 318 90 459 8.08e-32 124
MsG0180000665.01.T01 MTR_4g088155 27.411 394 187 13 24 322 72 461 1.53e-31 124
MsG0180000665.01.T01 MTR_6g088885 27.344 384 185 12 24 318 76 454 3.52e-31 123
MsG0180000665.01.T01 MTR_4g084480 36.683 199 116 7 24 218 74 266 2.19e-27 111
MsG0180000665.01.T01 MTR_4g084480 36.683 199 116 7 24 218 81 273 2.61e-27 111
MsG0180000665.01.T01 MTR_4g084480 36.683 199 116 7 24 218 81 273 3.42e-27 110
MsG0180000665.01.T01 MTR_8g102340 26.042 384 192 11 20 318 42 418 4.07e-27 111
MsG0180000665.01.T01 MTR_2g034440 31.837 245 134 5 24 238 71 312 6.59e-27 108
MsG0180000665.01.T01 MTR_8g085720 25.065 383 190 11 24 318 75 448 2.19e-26 109
MsG0180000665.01.T01 MTR_2g034470 31.837 245 134 5 24 238 44 285 3.36e-25 104
MsG0180000665.01.T01 MTR_2g034470 31.837 245 134 5 24 238 79 320 3.61e-25 104
MsG0180000665.01.T01 MTR_8g012400 27.179 390 188 14 24 322 78 462 3.77e-25 105
MsG0180000665.01.T01 MTR_1g007810 36.869 198 114 7 24 218 66 255 6.64e-25 103
MsG0180000665.01.T01 MTR_3g116510 26.371 383 190 12 23 318 77 454 1.71e-24 103
MsG0180000665.01.T01 MTR_4g076255 33.061 245 121 9 24 237 74 306 7.34e-24 100
MsG0180000665.01.T01 MTR_7g053500 26.221 389 188 13 24 318 75 458 1.28e-23 101
MsG0180000665.01.T01 MTR_7g053500 26.234 385 185 13 28 318 2 381 1.34e-23 100
MsG0180000665.01.T01 MTR_1g052430 31.837 245 131 7 24 237 81 320 2.89e-23 100
MsG0180000665.01.T01 MTR_4g010200 37.245 196 112 7 26 216 84 273 4.90e-23 99.4
MsG0180000665.01.T01 MTR_4g076500 31.579 247 127 8 24 237 127 364 9.62e-23 98.2
MsG0180000665.01.T01 MTR_4g076430 32.627 236 118 7 34 238 80 305 1.54e-22 97.1
MsG0180000665.01.T01 MTR_7g081350 30.522 249 130 9 24 238 76 315 2.66e-22 96.3
MsG0180000665.01.T01 MTR_2g034480 31.174 247 133 7 24 238 76 317 6.76e-22 95.5
MsG0180000665.01.T01 MTR_7g081370 30.932 236 133 9 24 238 77 303 1.14e-21 94.4
MsG0180000665.01.T01 MTR_2g019345 33.824 204 124 7 24 223 73 269 1.22e-21 95.1
MsG0180000665.01.T01 MTR_4g114850 32.016 253 127 9 24 237 75 321 2.18e-21 94.4
MsG0180000665.01.T01 MTR_3g083580 22.812 377 204 12 24 318 75 446 2.54e-21 95.1
MsG0180000665.01.T01 MTR_8g012400 35.204 196 117 8 28 218 2 192 2.78e-21 94.0
MsG0180000665.01.T01 MTR_4g114850 32.016 253 127 9 24 237 75 321 2.92e-21 94.0
MsG0180000665.01.T01 MTR_4g114850 32.016 253 127 9 24 237 75 321 3.19e-21 93.6
MsG0180000665.01.T01 MTR_1g077990 31.500 200 127 6 25 220 81 274 4.36e-21 94.0
MsG0180000665.01.T01 MTR_3g116510 26.708 322 147 10 84 318 1 320 1.17e-20 91.7
MsG0180000665.01.T01 MTR_5g078200 24.802 379 195 14 24 318 39 411 1.34e-20 93.2
MsG0180000665.01.T01 MTR_5g078200 24.802 379 195 14 24 318 72 444 1.38e-20 93.2
MsG0180000665.01.T01 MTR_4g076470 31.858 226 115 7 42 238 90 305 2.17e-20 90.9
MsG0180000665.01.T01 MTR_4g076440 30.085 236 125 8 32 238 81 305 5.18e-20 89.7
MsG0180000665.01.T01 MTR_4g076570 30.204 245 135 7 24 237 71 310 9.09e-20 89.4
MsG0180000665.01.T01 MTR_1g031900 34.146 205 124 7 24 222 73 272 1.08e-18 87.4
MsG0180000665.01.T01 MTR_3g080410 30.709 254 129 10 24 237 75 321 1.39e-18 86.3
MsG0180000665.01.T01 MTR_1g031900 34.146 205 124 7 24 222 73 272 1.57e-18 87.0
MsG0180000665.01.T01 MTR_4g052970 30.279 251 131 10 25 237 79 323 2.08e-18 85.9
MsG0180000665.01.T01 MTR_1g022160 29.046 241 130 7 34 237 84 320 2.92e-18 85.9
MsG0180000665.01.T01 MTR_1g022160 29.046 241 130 7 34 237 84 320 3.25e-18 85.9
MsG0180000665.01.T01 MTR_1g022160 29.046 241 130 7 34 237 84 320 3.30e-18 85.9
MsG0180000665.01.T01 MTR_1g022160 29.046 241 130 7 34 237 84 320 4.04e-18 85.1
MsG0180000665.01.T01 MTR_4g076490 30.837 227 117 8 42 238 164 380 3.47e-17 82.4
MsG0180000665.01.T01 MTR_1g056640 27.668 253 140 9 24 238 87 334 9.75e-17 81.6
MsG0180000665.01.T01 MTR_2g086530 28.125 256 130 11 25 238 79 322 1.27e-15 77.8
MsG0180000665.01.T01 MTR_2g086530 28.125 256 130 11 25 238 58 301 1.33e-15 77.4
MsG0180000665.01.T01 MTR_5g085580 31.863 204 124 8 24 220 74 269 1.80e-15 77.4
MsG0180000665.01.T01 MTR_3g065460 28.571 203 134 7 24 220 73 270 4.89e-14 73.2
MsG0180000665.01.T01 MTR_4g083500 31.492 181 115 5 41 218 111 285 9.96e-13 69.3
MsG0180000665.01.T01 MTR_4g132280 27.619 210 141 8 24 227 94 298 1.96e-12 68.6
MsG0180000665.01.T01 MTR_5g081720 29.187 209 136 8 24 226 86 288 2.20e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000665.01.T01 AT4G31140 51.542 454 108 5 2 346 26 476 4.79e-151 434
MsG0180000665.01.T01 AT5G58090 51.508 431 95 5 4 323 23 450 9.88e-137 397
MsG0180000665.01.T01 AT5G20870 43.636 440 128 8 2 324 29 465 2.16e-99 303
MsG0180000665.01.T01 AT1G64760 41.801 433 136 6 2 322 24 452 4.44e-97 296
MsG0180000665.01.T01 AT1G64760 41.801 433 136 6 2 322 24 452 4.44e-97 296
MsG0180000665.01.T01 AT2G19440 42.032 433 135 6 2 322 20 448 7.62e-97 295
MsG0180000665.01.T01 AT2G19440 42.032 433 135 6 2 322 20 448 7.62e-97 295
MsG0180000665.01.T01 AT5G64790 38.761 436 153 5 2 326 27 459 1.09e-95 293
MsG0180000665.01.T01 AT3G24330 40.045 442 147 8 4 331 40 477 2.21e-95 292
MsG0180000665.01.T01 AT3G04010 40.547 439 144 6 2 327 32 466 5.26e-95 291
MsG0180000665.01.T01 AT5G18220 39.655 464 152 8 4 345 31 488 3.44e-94 289
MsG0180000665.01.T01 AT4G17180 38.263 426 145 7 4 320 26 442 8.40e-84 262
MsG0180000665.01.T01 AT5G58480 33.645 428 173 9 4 324 27 450 1.36e-68 223
MsG0180000665.01.T01 AT3G57270 33.333 249 129 7 24 241 76 318 1.44e-28 113
MsG0180000665.01.T01 AT3G07320 27.249 389 182 15 24 318 74 455 2.77e-28 114
MsG0180000665.01.T01 AT5G55180 26.166 386 189 13 24 318 76 456 3.33e-27 111
MsG0180000665.01.T01 AT3G57260 34.599 237 115 8 32 238 90 316 3.63e-27 109
MsG0180000665.01.T01 AT3G57260 34.599 237 115 8 32 238 106 332 4.18e-27 110
MsG0180000665.01.T01 AT5G56590 25.773 388 192 12 21 318 72 453 6.74e-27 111
MsG0180000665.01.T01 AT3G55430 26.247 381 186 15 24 318 78 449 2.74e-26 108
MsG0180000665.01.T01 AT5G55180 26.316 380 184 13 24 312 76 450 2.90e-26 109
MsG0180000665.01.T01 AT4G26830 26.042 384 189 13 24 318 78 455 1.52e-25 107
MsG0180000665.01.T01 AT4G26830 26.042 384 189 13 24 318 74 451 1.55e-25 107
MsG0180000665.01.T01 AT4G14080 26.410 390 185 15 24 318 91 473 5.28e-25 105
MsG0180000665.01.T01 AT2G05790 27.543 403 176 16 24 318 74 468 1.24e-24 104
MsG0180000665.01.T01 AT3G13560 25.575 391 182 13 21 318 72 446 3.32e-24 103
MsG0180000665.01.T01 AT3G13560 25.575 391 182 13 21 318 72 446 3.32e-24 103
MsG0180000665.01.T01 AT3G13560 25.575 391 182 13 21 318 72 446 3.32e-24 103
MsG0180000665.01.T01 AT3G13560 25.575 391 182 13 21 318 72 446 3.32e-24 103
MsG0180000665.01.T01 AT3G13560 25.575 391 182 13 21 318 72 446 3.32e-24 103
MsG0180000665.01.T01 AT3G15800 35.714 196 120 6 24 216 92 284 4.12e-24 102
MsG0180000665.01.T01 AT5G20390 34.518 197 118 5 24 218 83 270 5.41e-24 101
MsG0180000665.01.T01 AT4G18340 33.000 200 122 7 24 218 83 275 6.37e-24 101
MsG0180000665.01.T01 AT4G18340 33.000 200 122 7 24 218 83 275 8.50e-24 101
MsG0180000665.01.T01 AT4G16260 30.769 247 132 7 24 238 44 283 1.28e-23 99.8
MsG0180000665.01.T01 AT4G16260 30.769 247 132 7 24 238 73 312 1.30e-23 100
MsG0180000665.01.T01 AT1G33220 33.511 188 115 5 32 218 93 271 2.72e-23 99.0
MsG0180000665.01.T01 AT1G30080 30.508 236 120 8 40 237 101 330 3.90e-23 99.8
MsG0180000665.01.T01 AT1G30080 30.508 236 120 8 40 237 101 330 4.78e-23 99.4
MsG0180000665.01.T01 AT3G23770 25.255 392 190 15 24 318 86 471 1.10e-22 99.0
MsG0180000665.01.T01 AT5G20340 34.043 188 114 5 32 218 102 280 1.13e-22 97.8
MsG0180000665.01.T01 AT5G20330 36.000 175 102 5 45 218 106 271 1.37e-22 97.4
MsG0180000665.01.T01 AT2G39640 27.177 379 181 16 24 320 79 444 3.81e-22 97.8
MsG0180000665.01.T01 AT1G66250 25.464 377 194 14 24 318 81 452 1.86e-21 95.5
MsG0180000665.01.T01 AT5G24318 24.479 384 195 12 24 319 80 456 3.43e-21 94.7
MsG0180000665.01.T01 AT2G26600 29.249 253 134 9 24 237 83 329 1.06e-20 92.4
MsG0180000665.01.T01 AT3G57240 29.796 245 129 7 24 237 84 316 1.28e-20 91.7
MsG0180000665.01.T01 AT2G01630 32.547 212 124 7 24 225 72 274 2.77e-20 91.7
MsG0180000665.01.T01 AT2G01630 32.547 212 124 7 24 225 72 274 3.36e-20 91.3
MsG0180000665.01.T01 AT2G01630 32.547 212 124 7 24 225 72 274 3.46e-20 91.7
MsG0180000665.01.T01 AT4G34480 26.016 369 182 11 34 318 86 447 1.03e-19 90.5
MsG0180000665.01.T01 AT1G32860 30.000 200 130 6 25 220 79 272 1.16e-19 89.7
MsG0180000665.01.T01 AT5G24318 24.403 377 190 12 24 312 80 449 1.48e-19 89.7
MsG0180000665.01.T01 AT2G16230 24.934 381 195 11 24 318 74 449 4.34e-19 88.6
MsG0180000665.01.T01 AT2G26600 28.631 241 128 8 35 237 1 235 9.05e-19 85.9
MsG0180000665.01.T01 AT5G42720 33.333 243 115 11 35 237 87 322 2.44e-18 85.9
MsG0180000665.01.T01 AT5G24318 29.949 197 129 7 24 218 80 269 2.91e-18 85.5
MsG0180000665.01.T01 AT2G27500 31.156 199 126 8 25 218 1 193 7.41e-18 83.6
MsG0180000665.01.T01 AT4G34480 26.254 339 161 10 64 318 3 336 9.35e-18 84.0
MsG0180000665.01.T01 AT2G27500 31.156 199 126 8 25 218 79 271 1.64e-17 83.2
MsG0180000665.01.T01 AT2G27500 31.156 199 126 8 25 218 79 271 2.20e-17 82.8
MsG0180000665.01.T01 AT5G20560 30.964 197 126 5 24 218 84 272 3.33e-17 82.0
MsG0180000665.01.T01 AT4G29360 27.273 253 138 10 24 237 86 331 6.77e-17 82.0
MsG0180000665.01.T01 AT4G29360 27.273 253 138 10 24 237 76 321 8.08e-17 82.0
MsG0180000665.01.T01 AT5G42100 32.240 183 112 7 42 218 94 270 3.07e-16 79.7
MsG0180000665.01.T01 AT3G61810 28.638 213 113 7 61 238 140 348 3.68e-16 79.3
MsG0180000665.01.T01 AT5G42100 32.240 183 112 7 42 218 94 270 3.77e-16 79.3
MsG0180000665.01.T01 AT4G34480 31.276 243 121 8 34 237 86 321 5.68e-16 78.6
MsG0180000665.01.T01 AT1G77780 31.915 188 118 4 34 220 84 262 1.02e-15 77.8
MsG0180000665.01.T01 AT1G11820 27.103 214 137 8 24 227 93 297 6.36e-14 73.2
MsG0180000665.01.T01 AT1G11820 27.103 214 137 8 24 227 93 297 7.58e-14 72.8
MsG0180000665.01.T01 AT1G77790 28.351 194 128 5 32 223 88 272 8.30e-14 72.0
MsG0180000665.01.T01 AT1G11820 27.536 207 131 8 24 220 93 290 1.10e-13 72.0
MsG0180000665.01.T01 AT3G55780 25.248 202 137 7 24 218 84 278 1.51e-12 68.6
MsG0180000665.01.T01 AT3G46570 31.313 198 122 7 26 218 80 268 1.16e-11 65.5

Find 74 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCATAGTCGACTGGAAAAT+TGG 0.169551 1:+9465210 None:intergenic
ACCGATCTCTCCAACAATTA+TGG 0.179022 1:+9465069 None:intergenic
ATCTTTCCGTTGTCGTTTAA+AGG 0.202599 1:+9465166 None:intergenic
CGCTCTTATAAAAGCTGGTT+TGG 0.202719 1:-9465419 MsG0180000665.01.T01:CDS
GCCATAGTATAAAGCAAATT+TGG 0.205966 1:+9467265 None:intergenic
GACTAGTGCAGTCTGCATTT+TGG 0.234926 1:+9464692 None:intergenic
ACCAAATTTGCTTTATACTA+TGG 0.262527 1:-9467266 MsG0180000665.01.T01:CDS
GGATAAATGTTCACGGTAAA+TGG 0.262811 1:+9465256 None:intergenic
CTAACTATGATACTCTAGTA+TGG 0.317827 1:-9465123 MsG0180000665.01.T01:CDS
AATCAGTTTGGATCATGATT+TGG 0.323082 1:+9464509 None:intergenic
TTCTCCTCGCGGAATCAGTT+TGG 0.344088 1:+9464497 None:intergenic
TCTTCATAAAGACTAATAAA+AGG 0.350618 1:+9465235 None:intergenic
GTGCAACTTGATCACTGTTC+AGG 0.355760 1:+9464734 None:intergenic
GCGTTGAATAAGAATGGTTT+TGG 0.368555 1:-9465100 MsG0180000665.01.T01:CDS
CATCTGGTGGAGTAGATATC+AGG 0.372328 1:-9467186 MsG0180000665.01.T01:intron
CCGATCTCTCCAACAATTAT+GGG 0.378662 1:+9465070 None:intergenic
GTTTCAGCTCATGTTTCATC+TGG 0.386117 1:-9467202 MsG0180000665.01.T01:CDS
ACCCTTCCGATGGCGACTTT+AGG 0.386656 1:-9465336 MsG0180000665.01.T01:CDS
GTGTTGGAAGTGGGTGGAAT+TGG 0.404650 1:-9467442 MsG0180000665.01.T01:CDS
TGGGTGGAATTGGAGTGAAC+TGG 0.429113 1:-9467432 MsG0180000665.01.T01:CDS
TCCATTGAGACCTGGTCCTA+TGG 0.429507 1:-9464955 MsG0180000665.01.T01:CDS
CCCATAATTGTTGGAGAGAT+CGG 0.432044 1:-9465070 MsG0180000665.01.T01:intron
GATGGCGCTTGCAAATTTCC+CGG 0.432957 1:-9464580 MsG0180000665.01.T01:CDS
GCATAGTCGACTGGAAAATT+GGG 0.440341 1:+9465211 None:intergenic
GCTCTTATAAAAGCTGGTTT+GGG 0.442512 1:-9465418 MsG0180000665.01.T01:CDS
GGTAACATGCCCATAATTGT+TGG 0.454864 1:-9465079 MsG0180000665.01.T01:CDS
CAAAACGCTCTTATAAAAGC+TGG 0.455309 1:-9465424 MsG0180000665.01.T01:CDS
TGCGTTTAATAGCTACTATC+AGG 0.464738 1:-9464617 MsG0180000665.01.T01:CDS
CAGGTGAATGATCAGGTTGA+TGG 0.470214 1:-9464598 MsG0180000665.01.T01:CDS
TCAGCTCATGTTTCATCTGG+TGG 0.473275 1:-9467199 MsG0180000665.01.T01:CDS
GATGTGTATCAGAGCTCATC+AGG 0.478752 1:-9465361 MsG0180000665.01.T01:CDS
CTACTATCAGGTGAATGATC+AGG 0.483380 1:-9464605 MsG0180000665.01.T01:CDS
TGATACACATCAGCATTTGA+AGG 0.486649 1:+9465373 None:intergenic
GTCAGTGACAGTAGAAAGAC+CGG 0.491584 1:+9464561 None:intergenic
TGACAGAGATCCTTCAACTC+AGG 0.492465 1:-9464542 MsG0180000665.01.T01:CDS
AATGCAGACTGCACTAGTCT+TGG 0.500089 1:-9464688 MsG0180000665.01.T01:CDS
GTATGGGCGTTGAATAAGAA+TGG 0.500864 1:-9465106 MsG0180000665.01.T01:CDS
ACCACAGTAGATGGTGGTAA+TGG 0.502268 1:+9467392 None:intergenic
TCCATAGGACCAGGTCTCAA+TGG 0.502603 1:+9464954 None:intergenic
CAATCTGAACCATGAGATCA+TGG 0.502886 1:+9465305 None:intergenic
GTCCTAAAGTCGCCATCGGA+AGG 0.521014 1:+9465334 None:intergenic
TGGAAGTGTTGTGGCTTCAA+AGG 0.524842 1:+9465462 None:intergenic
TACAAGAGCTGGAAGTGTTG+TGG 0.534283 1:+9465453 None:intergenic
GACAGACATCCATGATCTCA+TGG 0.543777 1:-9465314 MsG0180000665.01.T01:CDS
GGCTATGGAACTTCGTGTGG+CGG 0.546145 1:-9464667 MsG0180000665.01.T01:CDS
TCTGGGATTCAGGTTATGGT+TGG 0.558368 1:-9467292 MsG0180000665.01.T01:intron
AATAAAAGGATAAATGTTCA+CGG 0.560448 1:+9465249 None:intergenic
AATGTGCAACCCTGAGTTGA+AGG 0.566126 1:+9464532 None:intergenic
GGGTGGAATTGGAGTGAACT+GGG 0.569061 1:-9467431 MsG0180000665.01.T01:CDS
GACAGAGATCCTTCAACTCA+GGG 0.576853 1:-9464541 MsG0180000665.01.T01:CDS
GTCTGTCCTAAAGTCGCCAT+CGG 0.577196 1:+9465330 None:intergenic
TAACTATGATACTCTAGTAT+GGG 0.577250 1:-9465122 MsG0180000665.01.T01:CDS
CCGTTGTAAGTTGACAAGAA+AGG 0.578866 1:+9465487 None:intergenic
CTAAACAAGTATGCATCCAT+AGG 0.581623 1:+9464939 None:intergenic
GACTGCACTAGTCTTGGCTA+TGG 0.584565 1:-9464682 MsG0180000665.01.T01:CDS
CCTTTCTTGTCAACTTACAA+CGG 0.587520 1:-9465487 MsG0180000665.01.T01:CDS
TCCTAAAGTCGCCATCGGAA+GGG 0.589717 1:+9465335 None:intergenic
GATACACATCAGCATTTGAA+GGG 0.593720 1:+9465374 None:intergenic
TACATCATCAGTGTTGGAAG+TGG 0.598120 1:-9467452 None:intergenic
CTTGGCTATGGAACTTCGTG+TGG 0.608758 1:-9464670 MsG0180000665.01.T01:CDS
AGTGATCCTTTAAACGACAA+CGG 0.610182 1:-9465172 MsG0180000665.01.T01:CDS
TCATCAGTGTTGGAAGTGGG+TGG 0.622950 1:-9467448 None:intergenic
AAGTATGCATCCATAGGACC+AGG 0.624541 1:+9464945 None:intergenic
TCATCAGGTAACCCTTCCGA+TGG 0.628858 1:-9465346 MsG0180000665.01.T01:CDS
AAAGGGACTCCATTGAGACC+TGG 0.654522 1:-9464963 MsG0180000665.01.T01:intron
ACATCATCAGTGTTGGAAGT+GGG 0.655681 1:-9467451 None:intergenic
TGGCAAGCATAAGACACACT+CGG 0.661204 1:+9464712 None:intergenic
AAGAGATTCGATTCTCCTCG+CGG 0.664201 1:+9464486 None:intergenic
TCCATTACCACCATCTACTG+TGG 0.670093 1:-9467393 MsG0180000665.01.T01:intron
GACAACAAAAGCATTCAACC+AGG 0.676173 1:-9464903 MsG0180000665.01.T01:intron
TGTGGCGGTTTAGATATCCG+TGG 0.708567 1:-9464652 MsG0180000665.01.T01:CDS
TCAGTGACAGTAGAAAGACC+GGG 0.731431 1:+9464562 None:intergenic
ACGCATATGAGATGTTACCA+CGG 0.737125 1:+9464635 None:intergenic
TGATCCAAACTGATTCCGCG+AGG 0.757114 1:-9464501 MsG0180000665.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAGATAAAATTTATGTA+AGG - Chr1:9464939-9464958 MsG0180000665.01.T01:CDS 10.0%
!!! TATTTTACATCAATATAAAA+AGG + Chr1:9466178-9466197 None:intergenic 10.0%
!!! TTTTATATTGATGTAAAATA+CGG - Chr1:9466178-9466197 MsG0180000665.01.T01:intron 10.0%
!! TTTATATTGATGTAAAATAC+GGG - Chr1:9466179-9466198 MsG0180000665.01.T01:intron 15.0%
!!! AATACAATTTTGAAGATTAA+TGG - Chr1:9465578-9465597 MsG0180000665.01.T01:intron 15.0%
!!! ATTTCATGTAATTTTTTTCA+AGG - Chr1:9466353-9466372 MsG0180000665.01.T01:intron 15.0%
!!! GCAAAATTTTATTAAAAATC+AGG + Chr1:9465226-9465245 None:intergenic 15.0%
!!! GTAAAAAGTAAACTTTTTTA+TGG + Chr1:9464873-9464892 None:intergenic 15.0%
!!! GTTAAATATGATTTTACTTA+GGG + Chr1:9465137-9465156 None:intergenic 15.0%
!!! TATTTATTTATTCTGCATTT+TGG - Chr1:9464801-9464820 MsG0180000665.01.T01:intron 15.0%
!! AAACAAATAGAAAAACAAAC+AGG + Chr1:9465737-9465756 None:intergenic 20.0%
!! AATAAAAGGATAAATGTTCA+CGG + Chr1:9466638-9466657 None:intergenic 20.0%
!! ACAAATCATAGAAGAATATT+TGG - Chr1:9465819-9465838 MsG0180000665.01.T01:intron 20.0%
!! CATATTTAACCATCTATATA+CGG - Chr1:9465147-9465166 MsG0180000665.01.T01:CDS 20.0%
!! CTATATACAAGTAAAGTAAT+CGG - Chr1:9465273-9465292 MsG0180000665.01.T01:CDS 20.0%
!! GTGAAAATGTTAAAAGATAA+TGG - Chr1:9464513-9464532 MsG0180000665.01.T01:CDS 20.0%
!! TCTTCATAAAGACTAATAAA+AGG + Chr1:9466652-9466671 None:intergenic 20.0%
!! TTAATTAAAACATTGACAAC+AGG + Chr1:9465999-9466018 None:intergenic 20.0%
!!! AATAGTACTATTTGCTTTTT+TGG - Chr1:9467423-9467442 MsG0180000665.01.T01:CDS 20.0%
!!! AATCACTATTTTTCTTTTGT+AGG + Chr1:9464917-9464936 None:intergenic 20.0%
!!! ATCACTATTTTTCTTTTGTA+GGG + Chr1:9464916-9464935 None:intergenic 20.0%
!!! ATCATATATTTTTCCTTAAC+AGG + Chr1:9466064-9466083 None:intergenic 20.0%
!!! GATTTTTTCAACAACTTTTT+TGG - Chr1:9465850-9465869 MsG0180000665.01.T01:intron 20.0%
!!! GGTTAAATATGATTTTACTT+AGG + Chr1:9465138-9465157 None:intergenic 20.0%
!!! GTCAATGTTTTAATTAAATG+AGG - Chr1:9466002-9466021 MsG0180000665.01.T01:intron 20.0%
!!! TTTTCATTTCTTAATCTGTT+GGG - Chr1:9466243-9466262 MsG0180000665.01.T01:intron 20.0%
!!! TTTTTCATTTCTTAATCTGT+TGG - Chr1:9466242-9466261 MsG0180000665.01.T01:intron 20.0%
! AGTCATTTGTTTAACAGTTA+AGG + Chr1:9466282-9466301 None:intergenic 25.0%
! ATTTGTAGATGAAGAATCAA+GGG + Chr1:9465805-9465824 None:intergenic 25.0%
! GATTAAATTTAGCTGCAAAA+GGG - Chr1:9465924-9465943 MsG0180000665.01.T01:intron 25.0%
! TAACTATGATACTCTAGTAT+GGG - Chr1:9466762-9466781 MsG0180000665.01.T01:intron 25.0%
! TGATTAAATTTAGCTGCAAA+AGG - Chr1:9465923-9465942 MsG0180000665.01.T01:intron 25.0%
!! AAGTATTTTATTGGAAGGAA+GGG - Chr1:9465364-9465383 MsG0180000665.01.T01:CDS 25.0%
!! AATATGATTTTACTTAGGGA+AGG + Chr1:9465133-9465152 None:intergenic 25.0%
!! ACATCAAGTATTTTATTGGA+AGG - Chr1:9465359-9465378 MsG0180000665.01.T01:CDS 25.0%
!! ACCAAATTTGCTTTATACTA+TGG - Chr1:9464618-9464637 MsG0180000665.01.T01:CDS 25.0%
!! ATATGATTTTACTTAGGGAA+GGG + Chr1:9465132-9465151 None:intergenic 25.0%
!! ATATGTCTTCCTAACTTTTT+GGG - Chr1:9466120-9466139 MsG0180000665.01.T01:intron 25.0%
!! CAACACATCAAGTATTTTAT+TGG - Chr1:9465355-9465374 MsG0180000665.01.T01:CDS 25.0%
!! TGTGTTGAGTTTTTAATCTT+TGG - Chr1:9464744-9464763 MsG0180000665.01.T01:intron 25.0%
!! TTTAGTAAGAAAGTTTTTGC+AGG - Chr1:9465417-9465436 MsG0180000665.01.T01:CDS 25.0%
!! TTTTTGCAGGAACTTTTTAT+AGG - Chr1:9465430-9465449 MsG0180000665.01.T01:CDS 25.0%
!!! ATTTTTTTCAAGGTACATTG+CGG - Chr1:9466363-9466382 MsG0180000665.01.T01:intron 25.0%
!!! CTTTAAAGCATCAAGAATAT+TGG + Chr1:9464570-9464589 None:intergenic 25.0%
AATCAGTTTGGATCATGATT+TGG + Chr1:9467378-9467397 None:intergenic 30.0%
AGTGAAGACATATTTAACCA+AGG - Chr1:9464998-9465017 MsG0180000665.01.T01:intron 30.0%
AGTTATAATGTCTGCCAAAA+AGG - Chr1:9465773-9465792 MsG0180000665.01.T01:intron 30.0%
CTAACTATGATACTCTAGTA+TGG - Chr1:9466761-9466780 MsG0180000665.01.T01:intron 30.0%
GACAAGTAATTTCCATACAT+CGG + Chr1:9465647-9465666 None:intergenic 30.0%
GATTTGTAGATGAAGAATCA+AGG + Chr1:9465806-9465825 None:intergenic 30.0%
GCCATAGTATAAAGCAAATT+TGG + Chr1:9464622-9464641 None:intergenic 30.0%
GGTTATGATTGTTTCAAACT+AGG - Chr1:9464822-9464841 MsG0180000665.01.T01:intron 30.0%
GTGAAGACATATTTAACCAA+GGG - Chr1:9464999-9465018 MsG0180000665.01.T01:intron 30.0%
GTTGCATGCATAAAATCTAA+AGG - Chr1:9466094-9466113 MsG0180000665.01.T01:intron 30.0%
TTTCAAATACACCACTTCTT+GGG + Chr1:9467119-9467138 None:intergenic 30.0%
TTTGTAGATGAAGAATCAAG+GGG + Chr1:9465804-9465823 None:intergenic 30.0%
! CAAGTATTTTATTGGAAGGA+AGG - Chr1:9465363-9465382 MsG0180000665.01.T01:CDS 30.0%
! GATATGTCTTCCTAACTTTT+TGG - Chr1:9466119-9466138 MsG0180000665.01.T01:intron 30.0%
! GTTACAGAAAGTACAAACTA+GGG + Chr1:9465175-9465194 None:intergenic 30.0%
! TATGTCTTCCTAACTTTTTG+GGG - Chr1:9466121-9466140 MsG0180000665.01.T01:intron 30.0%
! TGTGTTTGAAATCATTGACT+AGG - Chr1:9465701-9465720 MsG0180000665.01.T01:intron 30.0%
! TGTTACAGAAAGTACAAACT+AGG + Chr1:9465176-9465195 None:intergenic 30.0%
! TTTTGGATATTTACAAGAGC+TGG + Chr1:9466445-9466464 None:intergenic 30.0%
!! CTTGATGCTTTAAAGAATCT+GGG - Chr1:9464575-9464594 MsG0180000665.01.T01:CDS 30.0%
!! GATTGTTTTATTACGATGGA+CGG - Chr1:9467024-9467043 MsG0180000665.01.T01:intron 30.0%
!! TCTTGATGCTTTAAAGAATC+TGG - Chr1:9464574-9464593 MsG0180000665.01.T01:CDS 30.0%
AATTTCACACTGACCTGTTA+AGG - Chr1:9466048-9466067 MsG0180000665.01.T01:intron 35.0%
ACTAAGATACTTCCGATGTA+TGG - Chr1:9465632-9465651 MsG0180000665.01.T01:intron 35.0%
AGGTAACTTTGAACGTCATT+GGG - Chr1:9467001-9467020 MsG0180000665.01.T01:intron 35.0%
AGTATGTATTGCTGTGAGTT+TGG - Chr1:9465520-9465539 MsG0180000665.01.T01:intron 35.0%
AGTGATCCTTTAAACGACAA+CGG - Chr1:9466712-9466731 MsG0180000665.01.T01:intron 35.0%
ATGTAAAATACGGGCAATTG+CGG - Chr1:9466188-9466207 MsG0180000665.01.T01:intron 35.0%
CAAAACGCTCTTATAAAAGC+TGG - Chr1:9466460-9466479 MsG0180000665.01.T01:intron 35.0%
CCTTTCTTGTCAACTTACAA+CGG - Chr1:9466397-9466416 MsG0180000665.01.T01:intron 35.0%
CTAAACAAGTATGCATCCAT+AGG + Chr1:9466948-9466967 None:intergenic 35.0%
GAAATTACTTGTCGTTCCTT+TGG - Chr1:9465654-9465673 MsG0180000665.01.T01:intron 35.0%
GATACACATCAGCATTTGAA+GGG + Chr1:9466513-9466532 None:intergenic 35.0%
GATTCCACTAAGTATTCCAA+AGG + Chr1:9465673-9465692 None:intergenic 35.0%
GGATAAATGTTCACGGTAAA+TGG + Chr1:9466631-9466650 None:intergenic 35.0%
GTTTCAAATACACCACTTCT+TGG + Chr1:9467120-9467139 None:intergenic 35.0%
GTTTGTACTTTCTGTAACAC+CGG - Chr1:9465177-9465196 MsG0180000665.01.T01:CDS 35.0%
TAAATCGAGTCATGAAACCT+TGG + Chr1:9466894-9466913 None:intergenic 35.0%
TCTCTTGAACAATTCGTCTT+TGG + Chr1:9465053-9465072 None:intergenic 35.0%
TGATACACATCAGCATTTGA+AGG + Chr1:9466514-9466533 None:intergenic 35.0%
TGATTGTTTCAAACTAGGAG+AGG - Chr1:9464827-9464846 MsG0180000665.01.T01:intron 35.0%
TGCGTTTAATAGCTACTATC+AGG - Chr1:9467267-9467286 MsG0180000665.01.T01:CDS 35.0%
TTCATGACTCGATTTATTGC+CGG - Chr1:9466898-9466917 MsG0180000665.01.T01:intron 35.0%
TTGAAAAATGCATAGTCGAC+TGG + Chr1:9466685-9466704 None:intergenic 35.0%
! AACATTTTCACCACAGTAGA+TGG + Chr1:9464504-9464523 None:intergenic 35.0%
! ATCTTTCCGTTGTCGTTTAA+AGG + Chr1:9466721-9466740 None:intergenic 35.0%
! ATGTCTTCCTAACTTTTTGG+GGG - Chr1:9466122-9466141 MsG0180000665.01.T01:intron 35.0%
! CTTTAAAGAATCTGGGATTC+AGG - Chr1:9464582-9464601 MsG0180000665.01.T01:CDS 35.0%
! GCGTTGAATAAGAATGGTTT+TGG - Chr1:9466784-9466803 MsG0180000665.01.T01:intron 35.0%
! GCTCTTATAAAAGCTGGTTT+GGG - Chr1:9466466-9466485 MsG0180000665.01.T01:intron 35.0%
! TGCAGGAACTTTTTATAGGA+TGG - Chr1:9465434-9465453 MsG0180000665.01.T01:CDS 35.0%
!! CAACAGGTTGATATTTGTAC+AGG + Chr1:9465983-9466002 None:intergenic 35.0%
!! GTCGACTATGCATTTTTCAA+CGG - Chr1:9466685-9466704 MsG0180000665.01.T01:intron 35.0%
!! TGGGGATTGTTTTATTACGA+TGG - Chr1:9467020-9467039 MsG0180000665.01.T01:intron 35.0%
!!! CAGCTTTTATAAGAGCGTTT+TGG + Chr1:9466462-9466481 None:intergenic 35.0%
ACCATTGGATCAAGAACCAA+CGG - Chr1:9467062-9467081 MsG0180000665.01.T01:intron 40.0%
ACCGATCTCTCCAACAATTA+TGG + Chr1:9466818-9466837 None:intergenic 40.0%
ACGCATATGAGATGTTACCA+CGG + Chr1:9467252-9467271 None:intergenic 40.0%
ACTCGATTTATTGCCGGAAA+GGG - Chr1:9466904-9466923 MsG0180000665.01.T01:intron 40.0%
CAATCTGAACCATGAGATCA+TGG + Chr1:9466582-9466601 None:intergenic 40.0%
CAATGACGTTCAAAGTTACC+TGG + Chr1:9467002-9467021 None:intergenic 40.0%
CAGGTAACTTTGAACGTCAT+TGG - Chr1:9467000-9467019 MsG0180000665.01.T01:intron 40.0%
CCCATAATTGTTGGAGAGAT+CGG - Chr1:9466814-9466833 MsG0180000665.01.T01:intron 40.0%
CCGATCTCTCCAACAATTAT+GGG + Chr1:9466817-9466836 None:intergenic 40.0%
CGCTCTTATAAAAGCTGGTT+TGG - Chr1:9466465-9466484 MsG0180000665.01.T01:intron 40.0%
CTACTATCAGGTGAATGATC+AGG - Chr1:9467279-9467298 MsG0180000665.01.T01:CDS 40.0%
GACAGCCAACCAAATTACAA+GGG - Chr1:9465106-9465125 MsG0180000665.01.T01:CDS 40.0%
GATATTTGTACAGGTGGACA+AGG + Chr1:9465974-9465993 None:intergenic 40.0%
GCATAGTCGACTGGAAAATT+GGG + Chr1:9466676-9466695 None:intergenic 40.0%
GGAGAGGTGAGAAATTATAG+TGG - Chr1:9464843-9464862 MsG0180000665.01.T01:intron 40.0%
GGTAACATGCCCATAATTGT+TGG - Chr1:9466805-9466824 MsG0180000665.01.T01:intron 40.0%
GGTAACTTTGAACGTCATTG+GGG - Chr1:9467002-9467021 MsG0180000665.01.T01:intron 40.0%
GTTTCAGCTCATGTTTCATC+TGG - Chr1:9464682-9464701 MsG0180000665.01.T01:CDS 40.0%
TAATTGTTGGAGAGATCGGT+TGG - Chr1:9466818-9466837 MsG0180000665.01.T01:intron 40.0%
TCGTCAAGCTGCTGAAAAAT+GGG - Chr1:9464648-9464667 MsG0180000665.01.T01:CDS 40.0%
TGACAGCCAACCAAATTACA+AGG - Chr1:9465105-9465124 MsG0180000665.01.T01:CDS 40.0%
TGCATAGTCGACTGGAAAAT+TGG + Chr1:9466677-9466696 None:intergenic 40.0%
TGTAAAATACGGGCAATTGC+GGG - Chr1:9466189-9466208 MsG0180000665.01.T01:intron 40.0%
TTCTTGATCCAATGGTGAGT+TGG + Chr1:9467058-9467077 None:intergenic 40.0%
! AGAATCTGGGATTCAGGTTA+TGG - Chr1:9464588-9464607 MsG0180000665.01.T01:CDS 40.0%
! ATTTTCACCACAGTAGATGG+TGG + Chr1:9464501-9464520 None:intergenic 40.0%
! CCGTTGTAAGTTGACAAGAA+AGG + Chr1:9466400-9466419 None:intergenic 40.0%
!! CAGGTTGATATTTGTACAGG+TGG + Chr1:9465980-9465999 None:intergenic 40.0%
!! CCAATGGTGAGTTGGTATTT+CGG + Chr1:9467050-9467069 None:intergenic 40.0%
!! CGTTCCTTTGGAATACTTAG+TGG - Chr1:9465666-9465685 MsG0180000665.01.T01:intron 40.0%
!! GACAACAAAAGCATTCAACC+AGG - Chr1:9466981-9467000 MsG0180000665.01.T01:intron 40.0%
!! GTATGGGCGTTGAATAAGAA+TGG - Chr1:9466778-9466797 MsG0180000665.01.T01:intron 40.0%
!! TTTTCAAGGTACATTGCGGT+TGG - Chr1:9466367-9466386 MsG0180000665.01.T01:intron 40.0%
AAGAGATTCGATTCTCCTCG+CGG + Chr1:9467401-9467420 None:intergenic 45.0%
AAGGGCCCTTGTAATTTGGT+TGG + Chr1:9465114-9465133 None:intergenic 45.0%
AAGTATGCATCCATAGGACC+AGG + Chr1:9466942-9466961 None:intergenic 45.0%
CATCTGGTGGAGTAGATATC+AGG - Chr1:9464698-9464717 MsG0180000665.01.T01:CDS 45.0%
CCATTGGATCAAGAACCAAC+GGG - Chr1:9467063-9467082 MsG0180000665.01.T01:intron 45.0%
CCGAAATACCAACTCACCAT+TGG - Chr1:9467047-9467066 MsG0180000665.01.T01:intron 45.0%
CCTCTCTTCTGCATTTGACT+CGG - Chr1:9465485-9465504 MsG0180000665.01.T01:CDS 45.0%
CGAGTCAAATGCAGAAGAGA+GGG + Chr1:9465487-9465506 None:intergenic 45.0%
CTTGCTTGCACTGAATTCAG+TGG - Chr1:9465893-9465912 MsG0180000665.01.T01:intron 45.0%
GACAGACATCCATGATCTCA+TGG - Chr1:9466570-9466589 MsG0180000665.01.T01:intron 45.0%
GACAGAGATCCTTCAACTCA+GGG - Chr1:9467343-9467362 MsG0180000665.01.T01:intron 45.0%
GACTCGATTTATTGCCGGAA+AGG - Chr1:9466903-9466922 MsG0180000665.01.T01:intron 45.0%
GAGTCAAATGCAGAAGAGAG+GGG + Chr1:9465486-9465505 None:intergenic 45.0%
GATGTGTATCAGAGCTCATC+AGG - Chr1:9466523-9466542 MsG0180000665.01.T01:intron 45.0%
GTAAAATACGGGCAATTGCG+GGG - Chr1:9466190-9466209 MsG0180000665.01.T01:intron 45.0%
GTACAGGTGGACAAGGATTT+AGG + Chr1:9465967-9465986 None:intergenic 45.0%
GTCAGTGACAGTAGAAAGAC+CGG + Chr1:9467326-9467345 None:intergenic 45.0%
GTCGTCAAGCTGCTGAAAAA+TGG - Chr1:9464647-9464666 MsG0180000665.01.T01:CDS 45.0%
GTGCAACTTGATCACTGTTC+AGG + Chr1:9467153-9467172 None:intergenic 45.0%
TAGCACATTTGCCCAAGAAG+TGG - Chr1:9467105-9467124 MsG0180000665.01.T01:intron 45.0%
TCAGCTCATGTTTCATCTGG+TGG - Chr1:9464685-9464704 MsG0180000665.01.T01:CDS 45.0%
TCAGTGACAGTAGAAAGACC+GGG + Chr1:9467325-9467344 None:intergenic 45.0%
TCCATTACCACCATCTACTG+TGG - Chr1:9464491-9464510 MsG0180000665.01.T01:CDS 45.0%
TGACAGAGATCCTTCAACTC+AGG - Chr1:9467342-9467361 MsG0180000665.01.T01:intron 45.0%
TGGCAAGCATAAGACACACT+CGG + Chr1:9467175-9467194 None:intergenic 45.0%
TGGTGGAGTAGATATCAGGT+TGG - Chr1:9464702-9464721 MsG0180000665.01.T01:CDS 45.0%
TGTATTGCTGTGAGTTTGGC+AGG - Chr1:9465524-9465543 MsG0180000665.01.T01:intron 45.0%
! AATGCAGACTGCACTAGTCT+TGG - Chr1:9467196-9467215 MsG0180000665.01.T01:CDS 45.0%
! AATGTGCAACCCTGAGTTGA+AGG + Chr1:9467355-9467374 None:intergenic 45.0%
! ACCACAGTAGATGGTGGTAA+TGG + Chr1:9464495-9464514 None:intergenic 45.0%
! GACTAGTGCAGTCTGCATTT+TGG + Chr1:9467195-9467214 None:intergenic 45.0%
! TCTGGGATTCAGGTTATGGT+TGG - Chr1:9464592-9464611 MsG0180000665.01.T01:CDS 45.0%
!! ATCAAGGGGCATGTCCTTTT+TGG + Chr1:9465790-9465809 None:intergenic 45.0%
!! CAGGTGAATGATCAGGTTGA+TGG - Chr1:9467286-9467305 MsG0180000665.01.T01:intron 45.0%
!! TACAAGAGCTGGAAGTGTTG+TGG + Chr1:9466434-9466453 None:intergenic 45.0%
!! TGGAAGTGTTGTGGCTTCAA+AGG + Chr1:9466425-9466444 None:intergenic 45.0%
AAAGGGACTCCATTGAGACC+TGG - Chr1:9466921-9466940 MsG0180000665.01.T01:intron 50.0%
ACCTGAGTTCGATTCCTGGT+TGG - Chr1:9465073-9465092 MsG0180000665.01.T01:CDS 50.0%
ACTTCTCGAGCTCAATCCCT+TGG + Chr1:9465018-9465037 None:intergenic 50.0%
AGGGAAGGGCCCTTGTAATT+TGG + Chr1:9465118-9465137 None:intergenic 50.0%
CACTCAGCCCCCAAAAAGTT+AGG + Chr1:9466132-9466151 None:intergenic 50.0%
CCGAGTCAAATGCAGAAGAG+AGG + Chr1:9465488-9465507 None:intergenic 50.0%
CCTACAGACGGAGACAGAAA+CGG - Chr1:9466841-9466860 MsG0180000665.01.T01:intron 50.0%
CCTGAGTTCGATTCCTGGTT+GGG - Chr1:9465074-9465093 MsG0180000665.01.T01:CDS 50.0%
CTTGGCTATGGAACTTCGTG+TGG - Chr1:9467214-9467233 MsG0180000665.01.T01:CDS 50.0%
GAGAACCTGAGTTCGATTCC+TGG - Chr1:9465069-9465088 MsG0180000665.01.T01:intron 50.0%
GATGGCGCTTGCAAATTTCC+CGG - Chr1:9467304-9467323 MsG0180000665.01.T01:intron 50.0%
GGGTGGAATTGGAGTGAACT+GGG - Chr1:9464453-9464472 MsG0180000665.01.T01:CDS 50.0%
GTCTCAATGGAGTCCCTTTC+CGG + Chr1:9466920-9466939 None:intergenic 50.0%
GTCTGTCCTAAAGTCGCCAT+CGG + Chr1:9466557-9466576 None:intergenic 50.0%
TCATCAGGTAACCCTTCCGA+TGG - Chr1:9466538-9466557 MsG0180000665.01.T01:intron 50.0%
TCCATAGGACCAGGTCTCAA+TGG + Chr1:9466933-9466952 None:intergenic 50.0%
TCCATTGAGACCTGGTCCTA+TGG - Chr1:9466929-9466948 MsG0180000665.01.T01:intron 50.0%
TCCTAAAGTCGCCATCGGAA+GGG + Chr1:9466552-9466571 None:intergenic 50.0%
TGCACAAGACGAACAGAGAC+CGG + Chr1:9465199-9465218 None:intergenic 50.0%
TGGGTGGAATTGGAGTGAAC+TGG - Chr1:9464452-9464471 MsG0180000665.01.T01:CDS 50.0%
TGTCAAGAATCGTCCCAACC+AGG + Chr1:9465090-9465109 None:intergenic 50.0%
TGTGGCGGTTTAGATATCCG+TGG - Chr1:9467232-9467251 MsG0180000665.01.T01:CDS 50.0%
TTCTCCTCGCGGAATCAGTT+TGG + Chr1:9467390-9467409 None:intergenic 50.0%
! ATCACTGTTCAGGTTCGCTG+AGG + Chr1:9467143-9467162 None:intergenic 50.0%
! CTTGGGCAAATGTGCTACTC+CGG + Chr1:9467102-9467121 None:intergenic 50.0%
! TCACTGTTCAGGTTCGCTGA+GGG + Chr1:9467142-9467161 None:intergenic 50.0%
! TGATCCAAACTGATTCCGCG+AGG - Chr1:9467383-9467402 MsG0180000665.01.T01:intron 50.0%
!! ACTAGGGCGCCGTATATAGA+TGG + Chr1:9465159-9465178 None:intergenic 50.0%
!! CCCGTTGGTTCTTGATCCAA+TGG + Chr1:9467066-9467085 None:intergenic 50.0%
!! CTCGCGCAACGTTTTAACCA+AGG - Chr1:9466874-9466893 MsG0180000665.01.T01:intron 50.0%
!! GACTGCACTAGTCTTGGCTA+TGG - Chr1:9467202-9467221 MsG0180000665.01.T01:CDS 50.0%
!! TCAAGAACCAACGGGCTAGT+AGG - Chr1:9467071-9467090 MsG0180000665.01.T01:intron 50.0%
ACCCTTCCGATGGCGACTTT+AGG - Chr1:9466548-9466567 MsG0180000665.01.T01:intron 55.0%
CCCAACCAGGAATCGAACTC+AGG + Chr1:9465077-9465096 None:intergenic 55.0%
CCGTTTCTGTCTCCGTCTGT+AGG + Chr1:9466844-9466863 None:intergenic 55.0%
GGCTATGGAACTTCGTGTGG+CGG - Chr1:9467217-9467236 MsG0180000665.01.T01:CDS 55.0%
GTCCTAAAGTCGCCATCGGA+AGG + Chr1:9466553-9466572 None:intergenic 55.0%
!! AACGGGCTAGTAGGTGCTAC+CGG - Chr1:9467080-9467099 MsG0180000665.01.T01:intron 55.0%
!! CTTTTTGGGGGCTGAGTGCA+TGG - Chr1:9466134-9466153 MsG0180000665.01.T01:intron 55.0%
!! GAGATCGGTTGGCCTACAGA+CGG - Chr1:9466829-9466848 MsG0180000665.01.T01:intron 55.0%
GGTAGCACCTACTAGCCCGT+TGG + Chr1:9467081-9467100 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 9464444 9467462 9464444 ID=MsG0180000665.01;Name=MsG0180000665.01
Chr1 mRNA 9464444 9467462 9464444 ID=MsG0180000665.01.T01;Parent=MsG0180000665.01;Name=MsG0180000665.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|0.75|0.6|5|0|346
Chr1 exon 9467394 9467462 9467394 ID=MsG0180000665.01.T01:exon:1701;Parent=MsG0180000665.01.T01
Chr1 exon 9467187 9467302 9467187 ID=MsG0180000665.01.T01:exon:1702;Parent=MsG0180000665.01.T01
Chr1 exon 9465071 9465531 9465071 ID=MsG0180000665.01.T01:exon:1703;Parent=MsG0180000665.01.T01
Chr1 exon 9464904 9464981 9464904 ID=MsG0180000665.01.T01:exon:1704;Parent=MsG0180000665.01.T01
Chr1 exon 9464444 9464760 9464444 ID=MsG0180000665.01.T01:exon:1705;Parent=MsG0180000665.01.T01
Chr1 CDS 9467394 9467462 9467394 ID=MsG0180000665.01.T01:cds;Parent=MsG0180000665.01.T01
Chr1 CDS 9467187 9467302 9467187 ID=MsG0180000665.01.T01:cds;Parent=MsG0180000665.01.T01
Chr1 CDS 9465071 9465531 9465071 ID=MsG0180000665.01.T01:cds;Parent=MsG0180000665.01.T01
Chr1 CDS 9464904 9464981 9464904 ID=MsG0180000665.01.T01:cds;Parent=MsG0180000665.01.T01
Chr1 CDS 9464444 9464760 9464444 ID=MsG0180000665.01.T01:cds;Parent=MsG0180000665.01.T01
Gene Sequence

>MsG0180000665.01.T01

GTTGGAAGTGGGTGGAATTGGAGTGAACTGGGAACACAGTCAACACATCCATTACCACCATCTACTGTGGTTATGGTTGGTATACCAAATTTGCTTTATACTATGGCTAATAGTCGTCAAGCTGCTGAAAAATGGGTTGCTAAGAATGTTTCAGCTCATGTTTCATCTGGTGGAGTAGATATCAGGTACATTGCGGTTGGAAATGAACCTTTCTTGTCAACTTACAACGGTACCTTTGAAGCCACAACACTTCCAGCTCTTGTAAATATCCAAAACGCTCTTATAAAAGCTGGTTTGGGAAGTTCAATCAAAGTCACTGTCCCTTCAAATGCTGATGTGTATCAGAGCTCATCAGGTAACCCTTCCGATGGCGACTTTAGGACAGACATCCATGATCTCATGGTTCAGATTGTCAAGTTTTTGAGTCAGAACAATGCTCCATTTACCGTGAACATTTATCCTTTTATTAGTCTTTATGAAGATCCCAATTTTCCAGTCGACTATGCATTTTTCAACGGTTTTAGTGATCCTTTAAACGACAACGGAAAGATCTACGACAATGTCTTTGATGCTAACTATGATACTCTAGTATGGGCGTTGAATAAGAATGGTTTTGGTAACATGCCCATAATTGTTGGAGAGATCGGGACTCCATTGAGACCTGGTCCTATGGATGCATACTTGTTTAGTTTAGTAGATGAAGACAACAAAAGCATTCAACCAGCGAACCTGAACAGTGATCAAGTTGCACCGAGTGTGTCTTATGCTTGCCAAAATGCAGACTGCACTAGTCTTGGCTATGGAACTTCGTGTGGCGGTTTAGATATCCGTGGTAACATCTCATATGCGTTTAATAGCTACTATCAGGTGAATGATCAGGTTGATGGCGCTTGCAAATTTCCCGGTCTTTCTACTGTCACTGACAGAGATCCTTCAACTCAGGGTTGCACATTCCAAATCATGATCCAAACTGATTCCGCGAGGAGAATCGAATCTCTTAGAATAGTACTATTTGCTTTTTTGGTTGTTGCTTTTTTGTAA
Protein sequence

>MsG0180000665.01.T01

VGSGWNWSELGTQSTHPLPPSTVVMVGIPNLLYTMANSRQAAEKWVAKNVSAHVSSGGVDIRYIAVGNEPFLSTYNGTFEATTLPALVNIQNALIKAGLGSSIKVTVPSNADVYQSSSGNPSDGDFRTDIHDLMVQIVKFLSQNNAPFTVNIYPFISLYEDPNFPVDYAFFNGFSDPLNDNGKIYDNVFDANYDTLVWALNKNGFGNMPIIVGEIGTPLRPGPMDAYLFSLVDEDNKSIQPANLNSDQVAPSVSYACQNADCTSLGYGTSCGGLDIRGNISYAFNSYYQVNDQVDGACKFPGLSTVTDRDPSTQGCTFQIMIQTDSARRIESLRIVLFAFLVVAFL*