Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000685.01.T01 | XP_013465761.1 | 85.256 | 312 | 14 | 2 | 2 | 284 | 25 | 333 | 0 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000685.01.T01 | Q9M088 | 63.057 | 314 | 84 | 2 | 2 | 286 | 26 | 336 | 2.22E-140 | 409 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000685.01.T01 | A0A072VDD5 | 85.256 | 312 | 14 | 2 | 2 | 284 | 25 | 333 | 0.0 | 525 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000665.01 | MsG0180000685.01 | 0.877675 | 5.196441e-69 | 2.635859e-65 |
| MsG0180000685.01 | MsG0180000698.01 | 0.903635 | 2.829143e-79 | 4.223199e-75 |
| MsG0180000685.01 | MsG0180005819.01 | 0.811205 | 7.866860e-51 | 4.839689e-48 |
| MsG0180000685.01 | MsG0180006183.01 | 0.803735 | 3.025324e-49 | 1.531946e-46 |
| MsG0180000685.01 | MsG0280006851.01 | 0.814671 | 1.368196e-51 | 9.238296e-49 |
| MsG0180000685.01 | MsG0280010617.01 | 0.806280 | 8.882988e-50 | 4.802031e-47 |
| MsG0180000685.01 | MsG0480018362.01 | 0.818119 | 2.314412e-52 | 1.717250e-49 |
| MsG0180000685.01 | MsG0480021486.01 | 0.804101 | 2.538630e-49 | 1.297660e-46 |
| MsG0180000685.01 | MsG0480021740.01 | 0.800193 | 1.616442e-48 | 7.479841e-46 |
| MsG0180000685.01 | MsG0580030141.01 | 0.802951 | 4.395655e-49 | 2.181507e-46 |
| MsG0180000685.01 | MsG0680033645.01 | 0.811469 | 6.894824e-51 | 4.271444e-48 |
| MsG0180000685.01 | MsG0880042392.01 | 0.801712 | 7.913079e-49 | 3.805135e-46 |
| MsG0180000685.01 | MsG0880045356.01 | 0.801989 | 6.939480e-49 | 3.360553e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000685.01.T01 | MTR_1g010120 | 85.256 | 312 | 14 | 2 | 2 | 284 | 25 | 333 | 0.0 | 525 |
| MsG0180000685.01.T01 | MTR_3g108600 | 64.331 | 314 | 61 | 4 | 2 | 286 | 30 | 321 | 3.62e-136 | 395 |
| MsG0180000685.01.T01 | MTR_6g032820 | 55.689 | 334 | 111 | 5 | 2 | 303 | 25 | 353 | 3.39e-119 | 350 |
| MsG0180000685.01.T01 | MTR_4g124440 | 52.484 | 322 | 121 | 2 | 1 | 293 | 26 | 344 | 3.08e-113 | 337 |
| MsG0180000685.01.T01 | MTR_7g085390 | 54.952 | 313 | 108 | 4 | 2 | 284 | 25 | 334 | 5.86e-109 | 326 |
| MsG0180000685.01.T01 | MTR_4g112025 | 51.911 | 314 | 117 | 4 | 2 | 284 | 30 | 340 | 4.57e-103 | 312 |
| MsG0180000685.01.T01 | MTR_1g053320 | 50.955 | 314 | 122 | 4 | 3 | 284 | 27 | 340 | 1.20e-102 | 310 |
| MsG0180000685.01.T01 | MTR_8g092070 | 48.632 | 329 | 137 | 2 | 2 | 301 | 33 | 358 | 1.89e-101 | 310 |
| MsG0180000685.01.T01 | MTR_2g027560 | 48.182 | 330 | 137 | 4 | 4 | 302 | 29 | 355 | 3.01e-101 | 306 |
| MsG0180000685.01.T01 | MTR_3g095050 | 49.518 | 311 | 125 | 3 | 2 | 284 | 33 | 339 | 1.73e-93 | 286 |
| MsG0180000685.01.T01 | MTR_4g134280 | 55.230 | 239 | 103 | 2 | 66 | 302 | 2 | 238 | 4.49e-91 | 276 |
| MsG0180000685.01.T01 | MTR_3g031770 | 40.777 | 309 | 151 | 4 | 4 | 284 | 28 | 332 | 3.26e-73 | 234 |
| MsG0180000685.01.T01 | MTR_4g069940 | 34.810 | 316 | 162 | 11 | 4 | 284 | 30 | 336 | 6.16e-44 | 157 |
| MsG0180000685.01.T01 | MTR_4g084480 | 32.063 | 315 | 171 | 11 | 4 | 284 | 26 | 331 | 1.01e-42 | 152 |
| MsG0180000685.01.T01 | MTR_4g084480 | 32.063 | 315 | 171 | 11 | 4 | 284 | 33 | 338 | 1.02e-42 | 152 |
| MsG0180000685.01.T01 | MTR_4g084480 | 32.698 | 315 | 169 | 12 | 4 | 284 | 33 | 338 | 1.04e-42 | 152 |
| MsG0180000685.01.T01 | MTR_1g077990 | 32.278 | 316 | 168 | 12 | 4 | 284 | 32 | 336 | 8.43e-40 | 144 |
| MsG0180000685.01.T01 | MTR_4g010200 | 35.430 | 302 | 152 | 11 | 19 | 284 | 46 | 340 | 2.06e-39 | 143 |
| MsG0180000685.01.T01 | MTR_4g088155 | 33.333 | 321 | 165 | 15 | 4 | 284 | 24 | 335 | 3.33e-39 | 144 |
| MsG0180000685.01.T01 | MTR_3g116510 | 33.333 | 309 | 165 | 10 | 11 | 284 | 33 | 335 | 2.25e-38 | 142 |
| MsG0180000685.01.T01 | MTR_2g019345 | 32.278 | 316 | 168 | 12 | 4 | 284 | 25 | 329 | 4.44e-38 | 140 |
| MsG0180000685.01.T01 | MTR_2g034440 | 31.034 | 290 | 166 | 6 | 23 | 284 | 39 | 322 | 5.20e-38 | 138 |
| MsG0180000685.01.T01 | MTR_1g052430 | 31.310 | 313 | 176 | 8 | 1 | 284 | 30 | 332 | 1.21e-37 | 139 |
| MsG0180000685.01.T01 | MTR_8g012400 | 32.704 | 318 | 169 | 13 | 4 | 284 | 30 | 339 | 1.29e-37 | 140 |
| MsG0180000685.01.T01 | MTR_1g007810 | 33.542 | 319 | 163 | 13 | 2 | 284 | 15 | 320 | 1.69e-37 | 137 |
| MsG0180000685.01.T01 | MTR_3g080410 | 33.333 | 318 | 164 | 14 | 4 | 284 | 27 | 333 | 2.49e-37 | 137 |
| MsG0180000685.01.T01 | MTR_4g076570 | 32.226 | 301 | 167 | 8 | 14 | 284 | 29 | 322 | 3.82e-37 | 136 |
| MsG0180000685.01.T01 | MTR_4g052970 | 31.329 | 316 | 172 | 13 | 4 | 284 | 30 | 335 | 4.16e-37 | 137 |
| MsG0180000685.01.T01 | MTR_2g034470 | 30.097 | 309 | 179 | 7 | 4 | 284 | 31 | 330 | 4.47e-36 | 134 |
| MsG0180000685.01.T01 | MTR_2g034470 | 31.034 | 290 | 166 | 6 | 23 | 284 | 12 | 295 | 4.48e-36 | 133 |
| MsG0180000685.01.T01 | MTR_4g114850 | 32.177 | 317 | 169 | 11 | 4 | 284 | 27 | 333 | 7.69e-36 | 133 |
| MsG0180000685.01.T01 | MTR_4g114850 | 32.177 | 317 | 169 | 11 | 4 | 284 | 27 | 333 | 8.29e-36 | 133 |
| MsG0180000685.01.T01 | MTR_4g114850 | 32.177 | 317 | 169 | 11 | 4 | 284 | 27 | 333 | 8.48e-36 | 133 |
| MsG0180000685.01.T01 | MTR_7g081350 | 31.410 | 312 | 173 | 11 | 2 | 284 | 26 | 325 | 1.14e-35 | 132 |
| MsG0180000685.01.T01 | MTR_4g076470 | 32.362 | 309 | 165 | 10 | 4 | 284 | 24 | 316 | 4.63e-35 | 130 |
| MsG0180000685.01.T01 | MTR_4g076255 | 33.562 | 292 | 151 | 13 | 22 | 284 | 41 | 318 | 5.08e-35 | 130 |
| MsG0180000685.01.T01 | MTR_2g086530 | 29.653 | 317 | 174 | 12 | 4 | 284 | 30 | 333 | 6.42e-35 | 131 |
| MsG0180000685.01.T01 | MTR_2g086530 | 29.653 | 317 | 174 | 12 | 4 | 284 | 9 | 312 | 6.81e-35 | 130 |
| MsG0180000685.01.T01 | MTR_6g088885 | 30.435 | 299 | 168 | 9 | 19 | 283 | 40 | 332 | 1.57e-34 | 132 |
| MsG0180000685.01.T01 | MTR_2g034480 | 30.225 | 311 | 176 | 8 | 4 | 284 | 28 | 327 | 2.61e-34 | 129 |
| MsG0180000685.01.T01 | MTR_5g085580 | 32.812 | 320 | 163 | 14 | 4 | 284 | 26 | 332 | 9.38e-34 | 129 |
| MsG0180000685.01.T01 | MTR_4g076500 | 30.547 | 311 | 173 | 9 | 4 | 284 | 79 | 376 | 6.57e-33 | 125 |
| MsG0180000685.01.T01 | MTR_1g056640 | 30.476 | 315 | 177 | 11 | 4 | 284 | 39 | 345 | 8.54e-33 | 127 |
| MsG0180000685.01.T01 | MTR_4g076430 | 30.195 | 308 | 173 | 8 | 4 | 284 | 24 | 316 | 2.10e-32 | 123 |
| MsG0180000685.01.T01 | MTR_1g022160 | 29.114 | 316 | 181 | 10 | 4 | 284 | 25 | 332 | 3.66e-32 | 124 |
| MsG0180000685.01.T01 | MTR_1g022160 | 29.114 | 316 | 181 | 10 | 4 | 284 | 25 | 332 | 6.39e-32 | 124 |
| MsG0180000685.01.T01 | MTR_1g022160 | 29.114 | 316 | 181 | 10 | 4 | 284 | 25 | 332 | 6.72e-32 | 124 |
| MsG0180000685.01.T01 | MTR_1g022160 | 29.114 | 316 | 181 | 10 | 4 | 284 | 25 | 332 | 8.23e-32 | 124 |
| MsG0180000685.01.T01 | MTR_7g053500 | 31.034 | 319 | 173 | 13 | 4 | 284 | 27 | 336 | 1.01e-31 | 124 |
| MsG0180000685.01.T01 | MTR_3g116510 | 38.350 | 206 | 114 | 8 | 87 | 284 | 1 | 201 | 1.69e-31 | 120 |
| MsG0180000685.01.T01 | MTR_7g081370 | 30.225 | 311 | 165 | 11 | 2 | 284 | 27 | 313 | 2.71e-31 | 120 |
| MsG0180000685.01.T01 | MTR_4g076440 | 28.896 | 308 | 177 | 9 | 4 | 284 | 24 | 316 | 5.10e-31 | 119 |
| MsG0180000685.01.T01 | MTR_8g102340 | 35.088 | 228 | 135 | 8 | 64 | 284 | 79 | 300 | 9.54e-31 | 121 |
| MsG0180000685.01.T01 | MTR_3g065460 | 31.023 | 303 | 169 | 13 | 18 | 284 | 35 | 333 | 6.63e-30 | 119 |
| MsG0180000685.01.T01 | MTR_4g076490 | 30.000 | 310 | 172 | 11 | 4 | 284 | 98 | 391 | 3.01e-29 | 116 |
| MsG0180000685.01.T01 | MTR_8g012400 | 35.065 | 231 | 135 | 10 | 64 | 284 | 34 | 259 | 3.79e-29 | 115 |
| MsG0180000685.01.T01 | MTR_7g026340 | 32.166 | 314 | 168 | 14 | 4 | 284 | 24 | 325 | 7.32e-29 | 115 |
| MsG0180000685.01.T01 | MTR_5g078200 | 30.363 | 303 | 171 | 12 | 18 | 284 | 1 | 299 | 1.99e-28 | 115 |
| MsG0180000685.01.T01 | MTR_5g078200 | 30.363 | 303 | 171 | 12 | 18 | 284 | 34 | 332 | 2.74e-28 | 115 |
| MsG0180000685.01.T01 | MTR_3g083580 | 27.333 | 300 | 177 | 9 | 21 | 284 | 41 | 335 | 3.05e-28 | 114 |
| MsG0180000685.01.T01 | MTR_1g031900 | 30.921 | 304 | 168 | 11 | 17 | 284 | 36 | 333 | 4.21e-28 | 114 |
| MsG0180000685.01.T01 | MTR_8g085720 | 26.911 | 327 | 190 | 10 | 10 | 296 | 30 | 347 | 6.80e-28 | 113 |
| MsG0180000685.01.T01 | MTR_1g031900 | 30.921 | 304 | 168 | 11 | 17 | 284 | 36 | 333 | 9.30e-28 | 113 |
| MsG0180000685.01.T01 | MTR_7g053500 | 35.345 | 232 | 133 | 11 | 64 | 284 | 34 | 259 | 6.71e-27 | 109 |
| MsG0180000685.01.T01 | MTR_4g083500 | 29.841 | 315 | 177 | 10 | 4 | 284 | 45 | 349 | 1.22e-25 | 107 |
| MsG0180000685.01.T01 | MTR_4g132280 | 27.010 | 311 | 186 | 11 | 10 | 284 | 49 | 354 | 3.25e-22 | 97.4 |
| MsG0180000685.01.T01 | MTR_5g081720 | 26.174 | 298 | 173 | 12 | 23 | 284 | 54 | 340 | 5.16e-18 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000685.01.T01 | AT4G31140 | 63.057 | 314 | 84 | 2 | 2 | 286 | 26 | 336 | 2.26e-141 | 409 |
| MsG0180000685.01.T01 | AT5G58090 | 61.290 | 310 | 88 | 2 | 4 | 284 | 23 | 329 | 3.11e-130 | 380 |
| MsG0180000685.01.T01 | AT5G20870 | 54.545 | 319 | 106 | 5 | 2 | 284 | 29 | 344 | 1.20e-109 | 328 |
| MsG0180000685.01.T01 | AT3G04010 | 49.425 | 348 | 137 | 5 | 2 | 319 | 32 | 370 | 2.23e-103 | 312 |
| MsG0180000685.01.T01 | AT1G64760 | 52.484 | 322 | 119 | 5 | 2 | 293 | 24 | 341 | 3.05e-103 | 311 |
| MsG0180000685.01.T01 | AT1G64760 | 52.484 | 322 | 119 | 5 | 2 | 293 | 24 | 341 | 3.05e-103 | 311 |
| MsG0180000685.01.T01 | AT5G18220 | 53.074 | 309 | 113 | 4 | 4 | 284 | 31 | 335 | 4.13e-103 | 311 |
| MsG0180000685.01.T01 | AT2G19440 | 52.174 | 322 | 120 | 5 | 2 | 293 | 20 | 337 | 2.01e-101 | 306 |
| MsG0180000685.01.T01 | AT2G19440 | 52.174 | 322 | 120 | 5 | 2 | 293 | 20 | 337 | 2.01e-101 | 306 |
| MsG0180000685.01.T01 | AT5G64790 | 50.321 | 312 | 123 | 3 | 2 | 284 | 27 | 335 | 1.07e-100 | 305 |
| MsG0180000685.01.T01 | AT3G24330 | 52.077 | 313 | 114 | 6 | 4 | 284 | 40 | 348 | 1.76e-98 | 300 |
| MsG0180000685.01.T01 | AT4G17180 | 50.163 | 307 | 122 | 4 | 4 | 284 | 26 | 327 | 2.95e-97 | 296 |
| MsG0180000685.01.T01 | AT5G58480 | 40.193 | 311 | 152 | 4 | 4 | 284 | 27 | 333 | 2.65e-73 | 234 |
| MsG0180000685.01.T01 | AT3G57270 | 31.935 | 310 | 172 | 9 | 4 | 284 | 28 | 327 | 9.32e-41 | 145 |
| MsG0180000685.01.T01 | AT5G20330 | 31.847 | 314 | 166 | 11 | 4 | 284 | 35 | 333 | 5.94e-40 | 144 |
| MsG0180000685.01.T01 | AT4G18340 | 32.075 | 318 | 167 | 14 | 4 | 284 | 35 | 340 | 9.02e-40 | 144 |
| MsG0180000685.01.T01 | AT4G18340 | 32.075 | 318 | 167 | 14 | 4 | 284 | 35 | 340 | 1.08e-39 | 144 |
| MsG0180000685.01.T01 | AT3G57260 | 33.548 | 310 | 161 | 11 | 4 | 284 | 33 | 326 | 1.60e-39 | 142 |
| MsG0180000685.01.T01 | AT3G57260 | 33.548 | 310 | 161 | 11 | 4 | 284 | 49 | 342 | 2.35e-39 | 142 |
| MsG0180000685.01.T01 | AT2G05790 | 34.783 | 299 | 152 | 12 | 23 | 285 | 42 | 333 | 5.45e-39 | 144 |
| MsG0180000685.01.T01 | AT4G16260 | 30.952 | 294 | 167 | 7 | 20 | 285 | 9 | 294 | 8.50e-39 | 140 |
| MsG0180000685.01.T01 | AT4G16260 | 30.323 | 310 | 177 | 8 | 4 | 285 | 25 | 323 | 1.13e-38 | 140 |
| MsG0180000685.01.T01 | AT1G30080 | 30.915 | 317 | 172 | 12 | 4 | 284 | 37 | 342 | 2.04e-38 | 140 |
| MsG0180000685.01.T01 | AT1G30080 | 30.915 | 317 | 172 | 12 | 4 | 284 | 37 | 342 | 2.06e-38 | 141 |
| MsG0180000685.01.T01 | AT4G26830 | 31.962 | 316 | 170 | 12 | 4 | 284 | 30 | 335 | 2.24e-38 | 142 |
| MsG0180000685.01.T01 | AT4G26830 | 31.962 | 316 | 170 | 12 | 4 | 284 | 26 | 331 | 2.29e-38 | 142 |
| MsG0180000685.01.T01 | AT1G33220 | 32.333 | 300 | 158 | 10 | 4 | 270 | 35 | 322 | 3.03e-38 | 139 |
| MsG0180000685.01.T01 | AT3G15800 | 32.595 | 316 | 170 | 11 | 4 | 284 | 44 | 351 | 2.69e-37 | 137 |
| MsG0180000685.01.T01 | AT5G55180 | 30.794 | 315 | 176 | 11 | 4 | 284 | 28 | 334 | 4.12e-37 | 138 |
| MsG0180000685.01.T01 | AT5G55180 | 30.794 | 315 | 176 | 11 | 4 | 284 | 28 | 334 | 4.38e-37 | 138 |
| MsG0180000685.01.T01 | AT1G32860 | 31.132 | 318 | 172 | 13 | 4 | 284 | 30 | 337 | 4.48e-37 | 137 |
| MsG0180000685.01.T01 | AT5G20390 | 31.290 | 310 | 173 | 10 | 4 | 284 | 34 | 332 | 7.73e-37 | 135 |
| MsG0180000685.01.T01 | AT5G42720 | 34.539 | 304 | 153 | 14 | 19 | 284 | 39 | 334 | 3.35e-36 | 135 |
| MsG0180000685.01.T01 | AT5G20340 | 31.210 | 314 | 168 | 11 | 4 | 284 | 44 | 342 | 5.31e-36 | 133 |
| MsG0180000685.01.T01 | AT3G07320 | 31.875 | 320 | 169 | 15 | 4 | 284 | 26 | 335 | 2.10e-34 | 131 |
| MsG0180000685.01.T01 | AT5G56590 | 30.592 | 304 | 168 | 10 | 17 | 284 | 38 | 334 | 2.90e-34 | 131 |
| MsG0180000685.01.T01 | AT5G24318 | 29.712 | 313 | 179 | 11 | 4 | 284 | 31 | 334 | 6.47e-34 | 128 |
| MsG0180000685.01.T01 | AT2G16230 | 32.558 | 301 | 162 | 9 | 19 | 284 | 38 | 332 | 1.09e-33 | 129 |
| MsG0180000685.01.T01 | AT2G26600 | 29.968 | 317 | 176 | 11 | 4 | 284 | 35 | 341 | 1.47e-33 | 127 |
| MsG0180000685.01.T01 | AT5G24318 | 29.712 | 313 | 179 | 11 | 4 | 284 | 31 | 334 | 2.24e-33 | 128 |
| MsG0180000685.01.T01 | AT5G24318 | 29.712 | 313 | 179 | 11 | 4 | 284 | 31 | 334 | 2.55e-33 | 128 |
| MsG0180000685.01.T01 | AT2G27500 | 30.094 | 319 | 177 | 12 | 2 | 284 | 28 | 336 | 3.81e-33 | 126 |
| MsG0180000685.01.T01 | AT2G27500 | 30.094 | 319 | 177 | 12 | 2 | 284 | 28 | 336 | 6.71e-33 | 125 |
| MsG0180000685.01.T01 | AT4G34480 | 32.390 | 318 | 167 | 11 | 4 | 284 | 27 | 333 | 8.10e-33 | 125 |
| MsG0180000685.01.T01 | AT3G23770 | 31.579 | 323 | 168 | 15 | 4 | 284 | 38 | 349 | 9.09e-33 | 127 |
| MsG0180000685.01.T01 | AT3G57240 | 29.677 | 310 | 174 | 8 | 4 | 285 | 36 | 329 | 1.46e-32 | 124 |
| MsG0180000685.01.T01 | AT4G34480 | 32.390 | 318 | 167 | 11 | 4 | 284 | 27 | 333 | 3.47e-32 | 125 |
| MsG0180000685.01.T01 | AT4G14080 | 30.094 | 319 | 175 | 13 | 4 | 284 | 43 | 351 | 5.10e-32 | 125 |
| MsG0180000685.01.T01 | AT2G01630 | 29.747 | 316 | 171 | 11 | 10 | 284 | 27 | 332 | 1.80e-31 | 122 |
| MsG0180000685.01.T01 | AT2G01630 | 29.747 | 316 | 171 | 11 | 10 | 284 | 27 | 332 | 3.27e-31 | 122 |
| MsG0180000685.01.T01 | AT2G01630 | 29.747 | 316 | 171 | 11 | 10 | 284 | 27 | 332 | 6.32e-31 | 122 |
| MsG0180000685.01.T01 | AT1G66250 | 29.276 | 304 | 172 | 10 | 18 | 284 | 43 | 340 | 1.20e-30 | 121 |
| MsG0180000685.01.T01 | AT5G42100 | 30.094 | 319 | 175 | 13 | 4 | 284 | 28 | 336 | 6.96e-30 | 118 |
| MsG0180000685.01.T01 | AT5G42100 | 30.094 | 319 | 175 | 13 | 4 | 284 | 28 | 336 | 8.05e-30 | 118 |
| MsG0180000685.01.T01 | AT2G26600 | 34.348 | 230 | 135 | 9 | 64 | 284 | 25 | 247 | 9.39e-30 | 115 |
| MsG0180000685.01.T01 | AT3G55430 | 31.429 | 315 | 169 | 14 | 4 | 284 | 30 | 331 | 1.76e-29 | 117 |
| MsG0180000685.01.T01 | AT1G77780 | 29.293 | 297 | 171 | 9 | 17 | 284 | 36 | 322 | 4.40e-29 | 115 |
| MsG0180000685.01.T01 | AT3G61810 | 29.375 | 320 | 171 | 12 | 4 | 284 | 56 | 359 | 8.60e-29 | 114 |
| MsG0180000685.01.T01 | AT5G20560 | 27.244 | 312 | 184 | 10 | 4 | 284 | 35 | 334 | 1.14e-28 | 113 |
| MsG0180000685.01.T01 | AT4G29360 | 29.195 | 298 | 167 | 11 | 23 | 284 | 54 | 343 | 2.54e-27 | 112 |
| MsG0180000685.01.T01 | AT2G39640 | 31.949 | 313 | 166 | 15 | 4 | 284 | 31 | 328 | 2.63e-27 | 112 |
| MsG0180000685.01.T01 | AT4G29360 | 29.195 | 298 | 167 | 11 | 23 | 284 | 44 | 333 | 2.79e-27 | 112 |
| MsG0180000685.01.T01 | AT1G11820 | 26.667 | 315 | 182 | 10 | 10 | 284 | 48 | 353 | 1.22e-26 | 108 |
| MsG0180000685.01.T01 | AT2G27500 | 32.627 | 236 | 143 | 10 | 58 | 284 | 30 | 258 | 3.51e-26 | 106 |
| MsG0180000685.01.T01 | AT1G11820 | 26.667 | 315 | 182 | 10 | 10 | 284 | 48 | 353 | 3.70e-26 | 108 |
| MsG0180000685.01.T01 | AT1G77790 | 28.239 | 301 | 172 | 10 | 17 | 284 | 42 | 331 | 4.11e-26 | 106 |
| MsG0180000685.01.T01 | AT1G11820 | 26.667 | 315 | 182 | 10 | 10 | 284 | 48 | 353 | 5.18e-26 | 108 |
| MsG0180000685.01.T01 | AT3G13560 | 27.245 | 323 | 188 | 12 | 10 | 293 | 30 | 344 | 5.56e-26 | 108 |
| MsG0180000685.01.T01 | AT3G13560 | 27.245 | 323 | 188 | 12 | 10 | 293 | 30 | 344 | 5.56e-26 | 108 |
| MsG0180000685.01.T01 | AT3G13560 | 27.245 | 323 | 188 | 12 | 10 | 293 | 30 | 344 | 5.56e-26 | 108 |
| MsG0180000685.01.T01 | AT3G13560 | 27.245 | 323 | 188 | 12 | 10 | 293 | 30 | 344 | 5.56e-26 | 108 |
| MsG0180000685.01.T01 | AT3G13560 | 27.245 | 323 | 188 | 12 | 10 | 293 | 30 | 344 | 5.56e-26 | 108 |
| MsG0180000685.01.T01 | AT4G34480 | 35.965 | 228 | 128 | 9 | 67 | 284 | 3 | 222 | 1.16e-24 | 103 |
| MsG0180000685.01.T01 | AT3G46570 | 31.230 | 317 | 170 | 12 | 4 | 284 | 28 | 332 | 1.60e-24 | 102 |
| MsG0180000685.01.T01 | AT5G24318 | 31.343 | 201 | 126 | 8 | 90 | 284 | 1 | 195 | 9.79e-23 | 97.1 |
| MsG0180000685.01.T01 | AT3G55780 | 26.882 | 279 | 174 | 10 | 26 | 284 | 73 | 341 | 1.11e-21 | 94.7 |
Find 85 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAAGCATCAAGAATATT+TGG | 0.159392 | 1:-9702000 | None:intergenic |
| TGCATAGTCGACTGGAAAAT+TGG | 0.169551 | 1:-9703998 | None:intergenic |
| ACCGATCTCTCCAACAATTA+TGG | 0.179022 | 1:-9704139 | None:intergenic |
| ATCTTTCCGTTGTCGTTTAA+AGG | 0.202599 | 1:-9704042 | None:intergenic |
| CGCTCTTATAAAAGCTGGTT+TGG | 0.202719 | 1:+9703789 | MsG0180000685.01.T01:CDS |
| CTTGATGCTTTAAAGAAATC+TGG | 0.226533 | 1:+9702009 | MsG0180000685.01.T01:CDS |
| TTTAAAGAAATCTGGGATTC+AGG | 0.256144 | 1:+9702017 | MsG0180000685.01.T01:CDS |
| GGATAAATGTTCACGGTAAA+TGG | 0.262811 | 1:-9703952 | None:intergenic |
| TCTCAATGGAGTCCCCTTTC+CGG | 0.272611 | 1:-9704241 | None:intergenic |
| TTTCAAAATACACCACTTCT+TGG | 0.304045 | 1:-9704443 | None:intergenic |
| CTAACTATGATACTCTAGTA+TGG | 0.317827 | 1:+9704085 | MsG0180000685.01.T01:CDS |
| TCTTCATAAAGACTAATAAA+AGG | 0.350618 | 1:-9703973 | None:intergenic |
| GTGCAACTTGATCACTGTTC+AGG | 0.355760 | 1:-9704477 | None:intergenic |
| CAGGTAACTTTGAACGTCAT+TGG | 0.361509 | 1:+9704325 | MsG0180000685.01.T01:CDS |
| AGGTAACTTTGAACGTCATT+GGG | 0.365853 | 1:+9704326 | MsG0180000685.01.T01:CDS |
| GCGTTGAATAAGAATGGTTT+TGG | 0.368555 | 1:+9704108 | MsG0180000685.01.T01:CDS |
| ATCTGGTGGAGTATGATATC+AGG | 0.369565 | 1:+9702134 | MsG0180000685.01.T01:CDS |
| CCGATCTCTCCAACAATTAT+GGG | 0.378662 | 1:-9704138 | None:intergenic |
| CCAATGGTGAGTTGGTATTT+CGG | 0.383764 | 1:-9704373 | None:intergenic |
| ACCCTTCCGATGGCGACTTT+AGG | 0.386656 | 1:+9703872 | MsG0180000685.01.T01:CDS |
| TTCATGACTCGATTTATTGC+CGG | 0.399249 | 1:+9704222 | MsG0180000685.01.T01:CDS |
| TTCAAAATACACCACTTCTT+GGG | 0.402891 | 1:-9704442 | None:intergenic |
| GTGAAAATGTTAAAAGATAA+TGG | 0.403732 | 1:+9701946 | MsG0180000685.01.T01:CDS |
| GTGTTGGAAGTGGGTGGAAT+TGG | 0.404650 | 1:+9701875 | None:intergenic |
| GGGTGGAATTGGAGTGAACT+GGG | 0.423782 | 1:+9701886 | MsG0180000685.01.T01:CDS |
| TGGGTGGAATTGGAGTGAAC+TGG | 0.426991 | 1:+9701885 | MsG0180000685.01.T01:CDS |
| ACTCGATTTATTGCCGGAAA+GGG | 0.427868 | 1:+9704228 | MsG0180000685.01.T01:CDS |
| TCCATTGAGACCTGGTCCTA+TGG | 0.429507 | 1:+9704254 | MsG0180000685.01.T01:CDS |
| CCCATAATTGTTGGAGAGAT+CGG | 0.432044 | 1:+9704138 | MsG0180000685.01.T01:CDS |
| GCATAGTCGACTGGAAAATT+GGG | 0.440341 | 1:-9703997 | None:intergenic |
| GCTCTTATAAAAGCTGGTTT+GGG | 0.442512 | 1:+9703790 | MsG0180000685.01.T01:CDS |
| TGTTCAGCTCATGTTTCATC+TGG | 0.444306 | 1:+9702117 | MsG0180000685.01.T01:intron |
| GGTAACATGCCCATAATTGT+TGG | 0.454864 | 1:+9704129 | MsG0180000685.01.T01:CDS |
| CAAAACGCTCTTATAAAAGC+TGG | 0.455309 | 1:+9703784 | MsG0180000685.01.T01:CDS |
| TTGATGCTTTAAAGAAATCT+GGG | 0.455709 | 1:+9702010 | MsG0180000685.01.T01:CDS |
| CCGTTTCTGTCTCCGTCTGT+AGG | 0.478583 | 1:-9704165 | None:intergenic |
| GATGTGTATCAGAGCTCATC+AGG | 0.478752 | 1:+9703847 | MsG0180000685.01.T01:CDS |
| TGATACACATCAGCATTTGA+AGG | 0.486649 | 1:-9703835 | None:intergenic |
| ACCACAGTAGAGTGTGGTAA+TGG | 0.489534 | 1:-9701925 | None:intergenic |
| CCGAAATACCAACTCACCAT+TGG | 0.493738 | 1:+9704373 | MsG0180000685.01.T01:CDS |
| TCAGCTCATGTTTCATCTGG+TGG | 0.496210 | 1:+9702120 | MsG0180000685.01.T01:intron |
| CCCGTTGGTTCTTGATCCAA+TGG | 0.499872 | 1:-9704389 | None:intergenic |
| GTATGGGCGTTGAATAAGAA+TGG | 0.500864 | 1:+9704102 | MsG0180000685.01.T01:CDS |
| TCCATAGGACCAGGTCTCAA+TGG | 0.502603 | 1:-9704255 | None:intergenic |
| CAATCTGAACCATGAGATCA+TGG | 0.502886 | 1:-9703903 | None:intergenic |
| GACTCGATTTATTGCCGGAA+AGG | 0.519224 | 1:+9704227 | MsG0180000685.01.T01:CDS |
| CAATGACGTTCAAAGTTACC+TGG | 0.520270 | 1:-9704324 | None:intergenic |
| GTCCTAAAGTCGCCATCGGA+AGG | 0.521014 | 1:-9703874 | None:intergenic |
| TCAAGAACCAACGGGCTAGT+AGG | 0.521826 | 1:+9704397 | MsG0180000685.01.T01:CDS |
| TGGAAGTGTTGTGGCTTCAA+AGG | 0.524842 | 1:-9703746 | None:intergenic |
| TACAAGAGCTGGAAGTGTTG+TGG | 0.534283 | 1:-9703755 | None:intergenic |
| GACAGACATCCATGATCTCA+TGG | 0.543777 | 1:+9703894 | MsG0180000685.01.T01:CDS |
| TTCTTGATCCAATGGTGAGT+TGG | 0.549706 | 1:-9704381 | None:intergenic |
| ATCACTGTTCAGGTTCGCTG+AGG | 0.550563 | 1:-9704467 | None:intergenic |
| AATAAAAGGATAAATGTTCA+CGG | 0.560448 | 1:-9703959 | None:intergenic |
| CTTGGGCAAATGTGCTACTC+CGG | 0.568572 | 1:-9704425 | None:intergenic |
| TAATTGTTGGAGAGATCGGT+TGG | 0.569155 | 1:+9704142 | MsG0180000685.01.T01:CDS |
| ACCATTGGATCAAGAACCAA+CGG | 0.573644 | 1:+9704388 | MsG0180000685.01.T01:CDS |
| CTACATATCAGTGTTGGAAG+TGG | 0.574658 | 1:+9701865 | None:intergenic |
| TAAATCGAGTCATGAAACCT+TGG | 0.576604 | 1:-9704215 | None:intergenic |
| GTCTGTCCTAAAGTCGCCAT+CGG | 0.577196 | 1:-9703878 | None:intergenic |
| TAACTATGATACTCTAGTAT+GGG | 0.577250 | 1:+9704086 | MsG0180000685.01.T01:CDS |
| CCGTTGTAAGTTGACAAGAA+AGG | 0.578866 | 1:-9703721 | None:intergenic |
| CTAAACAAGTATGCATCCAT+AGG | 0.581623 | 1:-9704270 | None:intergenic |
| CCTTTCTTGTCAACTTACAA+CGG | 0.587520 | 1:+9703721 | MsG0180000685.01.T01:CDS |
| TCCTAAAGTCGCCATCGGAA+GGG | 0.589717 | 1:-9703873 | None:intergenic |
| AACGGGCTAGTAGGTGCTAC+CGG | 0.592787 | 1:+9704406 | MsG0180000685.01.T01:CDS |
| GATACACATCAGCATTTGAA+GGG | 0.593720 | 1:-9703834 | None:intergenic |
| CTCGATTTATTGCCGGAAAG+GGG | 0.594300 | 1:+9704229 | MsG0180000685.01.T01:CDS |
| CCATTGGATCAAGAACCAAC+GGG | 0.594581 | 1:+9704389 | MsG0180000685.01.T01:CDS |
| CCTACAGACGGAGACAGAAA+CGG | 0.595732 | 1:+9704165 | MsG0180000685.01.T01:CDS |
| TCACTGTTCAGGTTCGCTGA+GGG | 0.597689 | 1:-9704466 | None:intergenic |
| ATATCAGTGTTGGAAGTGGG+TGG | 0.605575 | 1:+9701869 | None:intergenic |
| AGTGATCCTTTAAACGACAA+CGG | 0.610182 | 1:+9704036 | MsG0180000685.01.T01:CDS |
| TACATATCAGTGTTGGAAGT+GGG | 0.610648 | 1:+9701866 | None:intergenic |
| TAGCACATTTGCCCAAGAAG+TGG | 0.619134 | 1:+9704431 | MsG0180000685.01.T01:CDS |
| AAGTATGCATCCATAGGACC+AGG | 0.624541 | 1:-9704264 | None:intergenic |
| TCATCAGGTAACCCTTCCGA+TGG | 0.628858 | 1:+9703862 | MsG0180000685.01.T01:CDS |
| GAGATCGGTTGGCCTACAGA+CGG | 0.643611 | 1:+9704153 | MsG0180000685.01.T01:CDS |
| GGTAACTTTGAACGTCATTG+GGG | 0.647034 | 1:+9704327 | MsG0180000685.01.T01:CDS |
| TCCATTACCACACTCTACTG+TGG | 0.648419 | 1:+9701924 | MsG0180000685.01.T01:CDS |
| GGTAGCACCTACTAGCCCGT+TGG | 0.654363 | 1:-9704404 | None:intergenic |
| AAGGGGACTCCATTGAGACC+TGG | 0.654522 | 1:+9704246 | MsG0180000685.01.T01:CDS |
| GACAACAAAAGCATTCAACC+AGG | 0.676173 | 1:+9704306 | MsG0180000685.01.T01:CDS |
| GGTGGAATTGGAGTGAACTG+GGG | 0.692379 | 1:+9701887 | MsG0180000685.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTACATCAATATAAAA+AGG | - | Chr1:9703501-9703520 | None:intergenic | 10.0% |
| !!! | TTTAAATCTTTTTACATAAA+AGG | + | Chr1:9702313-9702332 | MsG0180000685.01.T01:intron | 10.0% |
| !!! | TTTTATATTGATGTAAAATA+CGG | + | Chr1:9703501-9703520 | MsG0180000685.01.T01:intron | 10.0% |
| !! | AAATTAGACAAAATTTATGT+AGG | + | Chr1:9702371-9702390 | MsG0180000685.01.T01:intron | 15.0% |
| !! | AATTAGACAAAATTTATGTA+GGG | + | Chr1:9702372-9702391 | MsG0180000685.01.T01:intron | 15.0% |
| !! | TTTATATTGATGTAAAATAC+GGG | + | Chr1:9703502-9703521 | MsG0180000685.01.T01:intron | 15.0% |
| !!! | AATACAATTTTGAAGATTAA+TGG | + | Chr1:9702902-9702921 | MsG0180000685.01.T01:intron | 15.0% |
| !!! | ATTTCATGTAATTTTTTTCA+AGG | + | Chr1:9703677-9703696 | MsG0180000685.01.T01:intron | 15.0% |
| !!! | GTTAAATATGATTTTACTTA+GGG | - | Chr1:9702570-9702589 | None:intergenic | 15.0% |
| !!! | TATTTATTTATTCTGCATTT+TGG | + | Chr1:9702237-9702256 | MsG0180000685.01.T01:intron | 15.0% |
| !! | AAACAAATAGAAAAACAAAC+AGG | - | Chr1:9703061-9703080 | None:intergenic | 20.0% |
| !! | AATAAAAGGATAAATGTTCA+CGG | - | Chr1:9703962-9703981 | None:intergenic | 20.0% |
| !! | GTGAAAATGTTAAAAGATAA+TGG | + | Chr1:9701946-9701965 | MsG0180000685.01.T01:CDS | 20.0% |
| !! | TCTACAAATCATAGAATATT+TGG | + | Chr1:9703142-9703161 | MsG0180000685.01.T01:intron | 20.0% |
| !! | TCTTCATAAAGACTAATAAA+AGG | - | Chr1:9703976-9703995 | None:intergenic | 20.0% |
| !! | TTAATTAAAACATTGACAAC+AGG | - | Chr1:9703322-9703341 | None:intergenic | 20.0% |
| !! | TTACTTTACTTGTATATAGA+TGG | - | Chr1:9702592-9702611 | None:intergenic | 20.0% |
| !!! | ATCATATATTTTTCCTTAAC+AGG | - | Chr1:9703387-9703406 | None:intergenic | 20.0% |
| !!! | GATTTTTTCAACAACTTTTT+TGG | + | Chr1:9703173-9703192 | MsG0180000685.01.T01:intron | 20.0% |
| !!! | GGTTAAATATGATTTTACTT+AGG | - | Chr1:9702571-9702590 | None:intergenic | 20.0% |
| !!! | GTCAATGTTTTAATTAAATG+AGG | + | Chr1:9703325-9703344 | MsG0180000685.01.T01:intron | 20.0% |
| !!! | TAAAAAGATTTAAAACAGTG+TGG | - | Chr1:9702307-9702326 | None:intergenic | 20.0% |
| !!! | TTTAAAGCATCAAGAATATT+TGG | - | Chr1:9702003-9702022 | None:intergenic | 20.0% |
| !!! | TTTTCATTTCTTAATCTGTT+GGG | + | Chr1:9703566-9703585 | MsG0180000685.01.T01:intron | 20.0% |
| !!! | TTTTTCATTTCTTAATCTGT+TGG | + | Chr1:9703565-9703584 | MsG0180000685.01.T01:intron | 20.0% |
| ! | AGTCATTTGTTTAACAGTTA+AGG | - | Chr1:9703605-9703624 | None:intergenic | 25.0% |
| ! | ATTTGTAGATGAAGAATCAA+GGG | - | Chr1:9703131-9703150 | None:intergenic | 25.0% |
| ! | CAAATGATTGCTTTATACTA+TGG | + | Chr1:9702055-9702074 | MsG0180000685.01.T01:intron | 25.0% |
| ! | CATAGTATAAAGCAATCATT+TGG | - | Chr1:9702057-9702076 | None:intergenic | 25.0% |
| ! | GATTAAATTTAGCTGCAAAA+GGG | + | Chr1:9703247-9703266 | MsG0180000685.01.T01:intron | 25.0% |
| ! | TAACTATGATACTCTAGTAT+GGG | + | Chr1:9704086-9704105 | MsG0180000685.01.T01:CDS | 25.0% |
| ! | TGATTAAATTTAGCTGCAAA+AGG | + | Chr1:9703246-9703265 | MsG0180000685.01.T01:intron | 25.0% |
| ! | TGGTTATGATGTTTCAAATT+AGG | + | Chr1:9702257-9702276 | MsG0180000685.01.T01:intron | 25.0% |
| !! | AAGTATTTTATTGGAAGGAA+AGG | + | Chr1:9702686-9702705 | MsG0180000685.01.T01:intron | 25.0% |
| !! | AATATGATTTTACTTAGGGA+AGG | - | Chr1:9702566-9702585 | None:intergenic | 25.0% |
| !! | ACATCAAGTATTTTATTGGA+AGG | + | Chr1:9702681-9702700 | MsG0180000685.01.T01:intron | 25.0% |
| !! | AGTATTTTATTGGAAGGAAA+GGG | + | Chr1:9702687-9702706 | MsG0180000685.01.T01:intron | 25.0% |
| !! | ATATGATTTTACTTAGGGAA+GGG | - | Chr1:9702565-9702584 | None:intergenic | 25.0% |
| !! | ATATGTCTTCCTAACTTTTT+GGG | + | Chr1:9703443-9703462 | MsG0180000685.01.T01:intron | 25.0% |
| !! | CAACACATCAAGTATTTTAT+TGG | + | Chr1:9702677-9702696 | MsG0180000685.01.T01:intron | 25.0% |
| !! | TGTGTTGAGTTTTTAATCTT+TGG | + | Chr1:9702180-9702199 | MsG0180000685.01.T01:intron | 25.0% |
| !! | TTTAGTAAGAAAGTTTTTGC+AGG | + | Chr1:9702739-9702758 | MsG0180000685.01.T01:intron | 25.0% |
| !! | TTTTTGCAGGAACTTTTTAT+AGG | + | Chr1:9702752-9702771 | MsG0180000685.01.T01:intron | 25.0% |
| !!! | ATTGTTTTTATTACGATGGA+CGG | + | Chr1:9704350-9704369 | MsG0180000685.01.T01:CDS | 25.0% |
| !!! | ATTTTTTTCAAGGTACATTG+CGG | + | Chr1:9703687-9703706 | MsG0180000685.01.T01:intron | 25.0% |
| !!! | TTGATGCTTTAAAGAAATCT+GGG | + | Chr1:9702010-9702029 | MsG0180000685.01.T01:CDS | 25.0% |
| AGTACTTGCAAAAGCAAAAT+AGG | + | Chr1:9702345-9702364 | MsG0180000685.01.T01:intron | 30.0% | |
| AGTGAAGACATATTTAACCA+AGG | + | Chr1:9702431-9702450 | MsG0180000685.01.T01:intron | 30.0% | |
| AGTTATAATGTCTGCCAAAA+AGG | + | Chr1:9703099-9703118 | MsG0180000685.01.T01:intron | 30.0% | |
| CTAACTATGATACTCTAGTA+TGG | + | Chr1:9704085-9704104 | MsG0180000685.01.T01:CDS | 30.0% | |
| GACAAGTAATTTCCATACAT+CGG | - | Chr1:9702971-9702990 | None:intergenic | 30.0% | |
| GATTTGTAGATGAAGAATCA+AGG | - | Chr1:9703132-9703151 | None:intergenic | 30.0% | |
| GTGAAGACATATTTAACCAA+GGG | + | Chr1:9702432-9702451 | MsG0180000685.01.T01:intron | 30.0% | |
| GTTGCATGCATAAAATCTAA+AGG | + | Chr1:9703417-9703436 | MsG0180000685.01.T01:intron | 30.0% | |
| TTCAAAATACACCACTTCTT+GGG | - | Chr1:9704445-9704464 | None:intergenic | 30.0% | |
| TTTCAAAATACACCACTTCT+TGG | - | Chr1:9704446-9704465 | None:intergenic | 30.0% | |
| TTTGTAGATGAAGAATCAAG+GGG | - | Chr1:9703130-9703149 | None:intergenic | 30.0% | |
| ! | GATATGTCTTCCTAACTTTT+TGG | + | Chr1:9703442-9703461 | MsG0180000685.01.T01:intron | 30.0% |
| ! | TATGTCTTCCTAACTTTTTG+GGG | + | Chr1:9703444-9703463 | MsG0180000685.01.T01:intron | 30.0% |
| ! | TGTGTTTGAAATCATTGACT+AGG | + | Chr1:9703025-9703044 | MsG0180000685.01.T01:intron | 30.0% |
| ! | TTTAAAGAAATCTGGGATTC+AGG | + | Chr1:9702017-9702036 | MsG0180000685.01.T01:CDS | 30.0% |
| ! | TTTTGGATATTTACAAGAGC+TGG | - | Chr1:9703769-9703788 | None:intergenic | 30.0% |
| !! | CTTGATGCTTTAAAGAAATC+TGG | + | Chr1:9702009-9702028 | MsG0180000685.01.T01:CDS | 30.0% |
| AATTTCACACTGACCTGTTA+AGG | + | Chr1:9703371-9703390 | MsG0180000685.01.T01:intron | 35.0% | |
| ACTAAGATACTTCCGATGTA+TGG | + | Chr1:9702956-9702975 | MsG0180000685.01.T01:intron | 35.0% | |
| AGGTAACTTTGAACGTCATT+GGG | + | Chr1:9704326-9704345 | MsG0180000685.01.T01:CDS | 35.0% | |
| AGTATGTATTGCTGTGAGTT+TGG | + | Chr1:9702844-9702863 | MsG0180000685.01.T01:intron | 35.0% | |
| AGTGATCCTTTAAACGACAA+CGG | + | Chr1:9704036-9704055 | MsG0180000685.01.T01:CDS | 35.0% | |
| ATGTAAAATACGGGCAATTG+CGG | + | Chr1:9703511-9703530 | MsG0180000685.01.T01:intron | 35.0% | |
| CAAAACGCTCTTATAAAAGC+TGG | + | Chr1:9703784-9703803 | MsG0180000685.01.T01:CDS | 35.0% | |
| CCTTTCTTGTCAACTTACAA+CGG | + | Chr1:9703721-9703740 | MsG0180000685.01.T01:CDS | 35.0% | |
| CTAAACAAGTATGCATCCAT+AGG | - | Chr1:9704273-9704292 | None:intergenic | 35.0% | |
| GAAATTACTTGTCGTTCCTT+TGG | + | Chr1:9702978-9702997 | MsG0180000685.01.T01:intron | 35.0% | |
| GATACACATCAGCATTTGAA+GGG | - | Chr1:9703837-9703856 | None:intergenic | 35.0% | |
| GATTCCACTAAGTATTCCAA+AGG | - | Chr1:9702997-9703016 | None:intergenic | 35.0% | |
| GGATAAATGTTCACGGTAAA+TGG | - | Chr1:9703955-9703974 | None:intergenic | 35.0% | |
| TAAATCGAGTCATGAAACCT+TGG | - | Chr1:9704218-9704237 | None:intergenic | 35.0% | |
| TCTCTTGAACAATTCGTCTT+TGG | - | Chr1:9702486-9702505 | None:intergenic | 35.0% | |
| TGATACACATCAGCATTTGA+AGG | - | Chr1:9703838-9703857 | None:intergenic | 35.0% | |
| TTCATGACTCGATTTATTGC+CGG | + | Chr1:9704222-9704241 | MsG0180000685.01.T01:CDS | 35.0% | |
| TTGAAAAATGCATAGTCGAC+TGG | - | Chr1:9704009-9704028 | None:intergenic | 35.0% | |
| ! | ATCTTTCCGTTGTCGTTTAA+AGG | - | Chr1:9704045-9704064 | None:intergenic | 35.0% |
| ! | ATGTCTTCCTAACTTTTTGG+GGG | + | Chr1:9703445-9703464 | MsG0180000685.01.T01:intron | 35.0% |
| ! | GCGTTGAATAAGAATGGTTT+TGG | + | Chr1:9704108-9704127 | MsG0180000685.01.T01:CDS | 35.0% |
| ! | GCTCTTATAAAAGCTGGTTT+GGG | + | Chr1:9703790-9703809 | MsG0180000685.01.T01:CDS | 35.0% |
| ! | TGCAGGAACTTTTTATAGGA+TGG | + | Chr1:9702756-9702775 | MsG0180000685.01.T01:intron | 35.0% |
| !! | CAACAGGTTGATATTTGTAC+AGG | - | Chr1:9703306-9703325 | None:intergenic | 35.0% |
| !! | GTCGACTATGCATTTTTCAA+CGG | + | Chr1:9704009-9704028 | MsG0180000685.01.T01:CDS | 35.0% |
| !!! | CAGCTTTTATAAGAGCGTTT+TGG | - | Chr1:9703786-9703805 | None:intergenic | 35.0% |
| !!! | GGGGATTGTTTTTATTACGA+TGG | + | Chr1:9704346-9704365 | MsG0180000685.01.T01:CDS | 35.0% |
| ACCATTGGATCAAGAACCAA+CGG | + | Chr1:9704388-9704407 | MsG0180000685.01.T01:CDS | 40.0% | |
| ACCGATCTCTCCAACAATTA+TGG | - | Chr1:9704142-9704161 | None:intergenic | 40.0% | |
| ACTCGATTTATTGCCGGAAA+GGG | + | Chr1:9704228-9704247 | MsG0180000685.01.T01:CDS | 40.0% | |
| AGGAGAGTGAGAAATTCTAG+TGG | + | Chr1:9702277-9702296 | MsG0180000685.01.T01:intron | 40.0% | |
| AGTCGTAAGCTGCTGAAAAT+GGG | + | Chr1:9702083-9702102 | MsG0180000685.01.T01:intron | 40.0% | |
| ATCTGGTGGAGTATGATATC+AGG | + | Chr1:9702134-9702153 | MsG0180000685.01.T01:CDS | 40.0% | |
| CAATCTGAACCATGAGATCA+TGG | - | Chr1:9703906-9703925 | None:intergenic | 40.0% | |
| CAATGACGTTCAAAGTTACC+TGG | - | Chr1:9704327-9704346 | None:intergenic | 40.0% | |
| CAGGTAACTTTGAACGTCAT+TGG | + | Chr1:9704325-9704344 | MsG0180000685.01.T01:CDS | 40.0% | |
| CCCATAATTGTTGGAGAGAT+CGG | + | Chr1:9704138-9704157 | MsG0180000685.01.T01:CDS | 40.0% | |
| CCGATCTCTCCAACAATTAT+GGG | - | Chr1:9704141-9704160 | None:intergenic | 40.0% | |
| CGCTCTTATAAAAGCTGGTT+TGG | + | Chr1:9703789-9703808 | MsG0180000685.01.T01:CDS | 40.0% | |
| GATATTTGTACAGGTGGACA+AGG | - | Chr1:9703297-9703316 | None:intergenic | 40.0% | |
| GCATAGTCGACTGGAAAATT+GGG | - | Chr1:9704000-9704019 | None:intergenic | 40.0% | |
| GGTAACATGCCCATAATTGT+TGG | + | Chr1:9704129-9704148 | MsG0180000685.01.T01:CDS | 40.0% | |
| GGTAACTTTGAACGTCATTG+GGG | + | Chr1:9704327-9704346 | MsG0180000685.01.T01:CDS | 40.0% | |
| TAATTGTTGGAGAGATCGGT+TGG | + | Chr1:9704142-9704161 | MsG0180000685.01.T01:CDS | 40.0% | |
| TAGTCGTAAGCTGCTGAAAA+TGG | + | Chr1:9702082-9702101 | MsG0180000685.01.T01:intron | 40.0% | |
| TGCATAGTCGACTGGAAAAT+TGG | - | Chr1:9704001-9704020 | None:intergenic | 40.0% | |
| TGTAAAATACGGGCAATTGC+GGG | + | Chr1:9703512-9703531 | MsG0180000685.01.T01:intron | 40.0% | |
| TGTTCAGCTCATGTTTCATC+TGG | + | Chr1:9702117-9702136 | MsG0180000685.01.T01:intron | 40.0% | |
| TTCTTGATCCAATGGTGAGT+TGG | - | Chr1:9704384-9704403 | None:intergenic | 40.0% | |
| ! | ATTTTCACCACAGTAGAGTG+TGG | - | Chr1:9701934-9701953 | None:intergenic | 40.0% |
| ! | CCGTTGTAAGTTGACAAGAA+AGG | - | Chr1:9703724-9703743 | None:intergenic | 40.0% |
| ! | GAAATCTGGGATTCAGGTTA+TGG | + | Chr1:9702023-9702042 | MsG0180000685.01.T01:intron | 40.0% |
| !! | CAGGTTGATATTTGTACAGG+TGG | - | Chr1:9703303-9703322 | None:intergenic | 40.0% |
| !! | CCAATGGTGAGTTGGTATTT+CGG | - | Chr1:9704376-9704395 | None:intergenic | 40.0% |
| !! | CGTTCCTTTGGAATACTTAG+TGG | + | Chr1:9702990-9703009 | MsG0180000685.01.T01:intron | 40.0% |
| !! | GACAACAAAAGCATTCAACC+AGG | + | Chr1:9704306-9704325 | MsG0180000685.01.T01:CDS | 40.0% |
| !! | GTATGGGCGTTGAATAAGAA+TGG | + | Chr1:9704102-9704121 | MsG0180000685.01.T01:CDS | 40.0% |
| !! | TTTTCAAGGTACATTGCGGT+TGG | + | Chr1:9703691-9703710 | MsG0180000685.01.T01:intron | 40.0% |
| AAGGGCCCTTGTAATTTGGT+TGG | - | Chr1:9702547-9702566 | None:intergenic | 45.0% | |
| AAGTATGCATCCATAGGACC+AGG | - | Chr1:9704267-9704286 | None:intergenic | 45.0% | |
| ACCACAGTAGAGTGTGGTAA+TGG | - | Chr1:9701928-9701947 | None:intergenic | 45.0% | |
| CCATTGGATCAAGAACCAAC+GGG | + | Chr1:9704389-9704408 | MsG0180000685.01.T01:CDS | 45.0% | |
| CCGAAATACCAACTCACCAT+TGG | + | Chr1:9704373-9704392 | MsG0180000685.01.T01:CDS | 45.0% | |
| CCTCTCTTCTGCATTTGACT+CGG | + | Chr1:9702807-9702826 | MsG0180000685.01.T01:intron | 45.0% | |
| CGAGTCAAATGCAGAAGAGA+GGG | - | Chr1:9702809-9702828 | None:intergenic | 45.0% | |
| CTCGATTTATTGCCGGAAAG+GGG | + | Chr1:9704229-9704248 | MsG0180000685.01.T01:CDS | 45.0% | |
| CTTGCTTGCACTGAATTCAG+TGG | + | Chr1:9703216-9703235 | MsG0180000685.01.T01:intron | 45.0% | |
| GACAGACATCCATGATCTCA+TGG | + | Chr1:9703894-9703913 | MsG0180000685.01.T01:CDS | 45.0% | |
| GACGGCCAACCAAATTACAA+GGG | + | Chr1:9702539-9702558 | MsG0180000685.01.T01:intron | 45.0% | |
| GACTCGATTTATTGCCGGAA+AGG | + | Chr1:9704227-9704246 | MsG0180000685.01.T01:CDS | 45.0% | |
| GAGTCAAATGCAGAAGAGAG+GGG | - | Chr1:9702808-9702827 | None:intergenic | 45.0% | |
| GATGTGTATCAGAGCTCATC+AGG | + | Chr1:9703847-9703866 | MsG0180000685.01.T01:CDS | 45.0% | |
| GGTGGAGTATGATATCAGGT+TGG | + | Chr1:9702138-9702157 | MsG0180000685.01.T01:intron | 45.0% | |
| GTAAAATACGGGCAATTGCG+GGG | + | Chr1:9703513-9703532 | MsG0180000685.01.T01:intron | 45.0% | |
| GTACAGGTGGACAAGGATTT+AGG | - | Chr1:9703290-9703309 | None:intergenic | 45.0% | |
| GTCGTAAGCTGCTGAAAATG+GGG | + | Chr1:9702084-9702103 | MsG0180000685.01.T01:intron | 45.0% | |
| TAGCACATTTGCCCAAGAAG+TGG | + | Chr1:9704431-9704450 | MsG0180000685.01.T01:CDS | 45.0% | |
| TCAGCTCATGTTTCATCTGG+TGG | + | Chr1:9702120-9702139 | MsG0180000685.01.T01:intron | 45.0% | |
| TCCATTACCACACTCTACTG+TGG | + | Chr1:9701924-9701943 | MsG0180000685.01.T01:CDS | 45.0% | |
| TGACGGCCAACCAAATTACA+AGG | + | Chr1:9702538-9702557 | MsG0180000685.01.T01:intron | 45.0% | |
| TGTATTGCTGTGAGTTTGGC+AGG | + | Chr1:9702848-9702867 | MsG0180000685.01.T01:intron | 45.0% | |
| ! | TCTGGGATTCAGGTTATGGT+TGG | + | Chr1:9702027-9702046 | MsG0180000685.01.T01:intron | 45.0% |
| !! | ACTTCTAGAGCTCAATCCCT+TGG | - | Chr1:9702451-9702470 | None:intergenic | 45.0% |
| !! | ATCAAGGGGCATGTCCTTTT+TGG | - | Chr1:9703116-9703135 | None:intergenic | 45.0% |
| !! | TACAAGAGCTGGAAGTGTTG+TGG | - | Chr1:9703758-9703777 | None:intergenic | 45.0% |
| !! | TGGAAGTGTTGTGGCTTCAA+AGG | - | Chr1:9703749-9703768 | None:intergenic | 45.0% |
| ACCTGAGTTCGATTCCTGGT+TGG | + | Chr1:9702506-9702525 | MsG0180000685.01.T01:intron | 50.0% | |
| AGGGAAGGGCCCTTGTAATT+TGG | - | Chr1:9702551-9702570 | None:intergenic | 50.0% | |
| CACTCAGCCCCCAAAAAGTT+AGG | - | Chr1:9703455-9703474 | None:intergenic | 50.0% | |
| CCGAGTCAAATGCAGAAGAG+AGG | - | Chr1:9702810-9702829 | None:intergenic | 50.0% | |
| CCTACAGACGGAGACAGAAA+CGG | + | Chr1:9704165-9704184 | MsG0180000685.01.T01:CDS | 50.0% | |
| CCTGAGTTCGATTCCTGGTT+GGG | + | Chr1:9702507-9702526 | MsG0180000685.01.T01:intron | 50.0% | |
| CTGGTTGGGACGATTCTTGA+CGG | + | Chr1:9702521-9702540 | MsG0180000685.01.T01:intron | 50.0% | |
| GAGAACCTGAGTTCGATTCC+TGG | + | Chr1:9702502-9702521 | MsG0180000685.01.T01:intron | 50.0% | |
| GGGTGGAATTGGAGTGAACT+GGG | + | Chr1:9701886-9701905 | MsG0180000685.01.T01:CDS | 50.0% | |
| GGTGGAATTGGAGTGAACTG+GGG | + | Chr1:9701887-9701906 | MsG0180000685.01.T01:CDS | 50.0% | |
| GTCTGTCCTAAAGTCGCCAT+CGG | - | Chr1:9703881-9703900 | None:intergenic | 50.0% | |
| TCATCAGGTAACCCTTCCGA+TGG | + | Chr1:9703862-9703881 | MsG0180000685.01.T01:CDS | 50.0% | |
| TCCATAGGACCAGGTCTCAA+TGG | - | Chr1:9704258-9704277 | None:intergenic | 50.0% | |
| TCCATTGAGACCTGGTCCTA+TGG | + | Chr1:9704254-9704273 | MsG0180000685.01.T01:CDS | 50.0% | |
| TCCTAAAGTCGCCATCGGAA+GGG | - | Chr1:9703876-9703895 | None:intergenic | 50.0% | |
| TCTCAATGGAGTCCCCTTTC+CGG | - | Chr1:9704244-9704263 | None:intergenic | 50.0% | |
| TGGGTGGAATTGGAGTGAAC+TGG | + | Chr1:9701885-9701904 | MsG0180000685.01.T01:CDS | 50.0% | |
| ! | CTTGGGCAAATGTGCTACTC+CGG | - | Chr1:9704428-9704447 | None:intergenic | 50.0% |
| ! | TCACTGTTCAGGTTCGCTGA+GGG | - | Chr1:9704469-9704488 | None:intergenic | 50.0% |
| !! | CCCGTTGGTTCTTGATCCAA+TGG | - | Chr1:9704392-9704411 | None:intergenic | 50.0% |
| !! | CTCGCGCAACGTTTTAACCA+AGG | + | Chr1:9704198-9704217 | MsG0180000685.01.T01:CDS | 50.0% |
| !! | TCAAGAACCAACGGGCTAGT+AGG | + | Chr1:9704397-9704416 | MsG0180000685.01.T01:CDS | 50.0% |
| AAGGGGACTCCATTGAGACC+TGG | + | Chr1:9704246-9704265 | MsG0180000685.01.T01:CDS | 55.0% | |
| ACCCTTCCGATGGCGACTTT+AGG | + | Chr1:9703872-9703891 | MsG0180000685.01.T01:CDS | 55.0% | |
| CCCAACCAGGAATCGAACTC+AGG | - | Chr1:9702510-9702529 | None:intergenic | 55.0% | |
| CCGTTTCTGTCTCCGTCTGT+AGG | - | Chr1:9704168-9704187 | None:intergenic | 55.0% | |
| CGTCAAGAATCGTCCCAACC+AGG | - | Chr1:9702523-9702542 | None:intergenic | 55.0% | |
| GTCCTAAAGTCGCCATCGGA+AGG | - | Chr1:9703877-9703896 | None:intergenic | 55.0% | |
| !! | AACGGGCTAGTAGGTGCTAC+CGG | + | Chr1:9704406-9704425 | MsG0180000685.01.T01:CDS | 55.0% |
| !! | CTTTTTGGGGGCTGAGTGCA+TGG | + | Chr1:9703457-9703476 | MsG0180000685.01.T01:intron | 55.0% |
| !! | GAGATCGGTTGGCCTACAGA+CGG | + | Chr1:9704153-9704172 | MsG0180000685.01.T01:CDS | 55.0% |
| GGTAGCACCTACTAGCCCGT+TGG | - | Chr1:9704407-9704426 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 9701877 | 9704488 | 9701877 | ID=MsG0180000685.01;Name=MsG0180000685.01 |
| Chr1 | mRNA | 9701877 | 9704488 | 9701877 | ID=MsG0180000685.01.T01;Parent=MsG0180000685.01;Name=MsG0180000685.01.T01;_AED=0.50;_eAED=0.52;_QI=0|0|0|1|1|1|3|0|327 |
| Chr1 | exon | 9701877 | 9702038 | 9701877 | ID=MsG0180000685.01.T01:exon:1796;Parent=MsG0180000685.01.T01 |
| Chr1 | exon | 9702124 | 9702155 | 9702124 | ID=MsG0180000685.01.T01:exon:1795;Parent=MsG0180000685.01.T01 |
| Chr1 | exon | 9703699 | 9704488 | 9703699 | ID=MsG0180000685.01.T01:exon:1794;Parent=MsG0180000685.01.T01 |
| Chr1 | CDS | 9701877 | 9702038 | 9701877 | ID=MsG0180000685.01.T01:cds;Parent=MsG0180000685.01.T01 |
| Chr1 | CDS | 9702124 | 9702155 | 9702124 | ID=MsG0180000685.01.T01:cds;Parent=MsG0180000685.01.T01 |
| Chr1 | CDS | 9703699 | 9704488 | 9703699 | ID=MsG0180000685.01.T01:cds;Parent=MsG0180000685.01.T01 |
| Gene Sequence |
| Protein sequence |
