Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000698.01.T01 | XP_013465761.1 | 75.122 | 410 | 15 | 6 | 2 | 327 | 25 | 431 | 0 | 579 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000698.01.T01 | Q9M088 | 55.122 | 410 | 96 | 7 | 2 | 327 | 26 | 431 | 5.20E-147 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000698.01.T01 | A0A072VDD5 | 75.122 | 410 | 15 | 6 | 2 | 327 | 25 | 431 | 0.0 | 579 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000096.01 | MsG0180000698.01 | 0.802971 | 4.355800e-49 | 2.162741e-46 |
| MsG0180000665.01 | MsG0180000698.01 | 0.920584 | 1.063495e-87 | 3.636602e-83 |
| MsG0180000685.01 | MsG0180000698.01 | 0.903635 | 2.829143e-79 | 4.223199e-75 |
| MsG0180000698.01 | MsG0180001588.01 | 0.814214 | 1.726726e-51 | 1.151566e-48 |
| MsG0180000698.01 | MsG0180004467.01 | 0.800941 | 1.137800e-48 | 5.366152e-46 |
| MsG0180000698.01 | MsG0180005819.01 | 0.823603 | 1.267334e-53 | 1.096319e-50 |
| MsG0180000698.01 | MsG0180006183.01 | 0.811267 | 7.624716e-51 | 4.698400e-48 |
| MsG0180000698.01 | MsG0280006851.01 | 0.812715 | 3.688341e-51 | 2.362249e-48 |
| MsG0180000698.01 | MsG0280010617.01 | 0.835227 | 1.896936e-56 | 2.305271e-53 |
| MsG0180000698.01 | MsG0280010825.01 | 0.801896 | 7.251500e-49 | 3.503593e-46 |
| MsG0180000698.01 | MsG0380012818.01 | 0.817734 | 2.828081e-52 | 2.076384e-49 |
| MsG0180000698.01 | MsG0380015402.01 | 0.821534 | 3.836203e-53 | 3.129305e-50 |
| MsG0180000698.01 | MsG0380015857.01 | 0.803376 | 3.590465e-49 | 1.801363e-46 |
| MsG0180000698.01 | MsG0380016031.01 | 0.836133 | 1.118466e-56 | 1.396711e-53 |
| MsG0180000698.01 | MsG0380016819.01 | 0.818309 | 2.096664e-52 | 1.563854e-49 |
| MsG0180000698.01 | MsG0480018362.01 | 0.835935 | 1.255639e-56 | 1.558482e-53 |
| MsG0180000698.01 | MsG0480021486.01 | 0.822767 | 1.986496e-53 | 1.678427e-50 |
| MsG0180000698.01 | MsG0480021740.01 | 0.844370 | 7.884225e-59 | 1.270052e-55 |
| MsG0180000698.01 | MsG0480023575.01 | 0.801891 | 7.270572e-49 | 3.512353e-46 |
| MsG0180000698.01 | MsG0480023626.01 | 0.828147 | 1.056606e-54 | 1.041387e-51 |
| MsG0180000698.01 | MsG0480023663.01 | 0.802429 | 5.633912e-49 | 2.759259e-46 |
| MsG0180000698.01 | MsG0480023774.01 | 0.815386 | 9.492712e-52 | 6.535440e-49 |
| MsG0180000698.01 | MsG0680033645.01 | 0.826885 | 2.121677e-54 | 2.015449e-51 |
| MsG0180000698.01 | MsG0680035905.01 | 0.802386 | 5.749497e-49 | 2.812846e-46 |
| MsG0180000698.01 | MsG0780038919.01 | 0.808937 | 2.423327e-50 | 1.403797e-47 |
| MsG0180000698.01 | MsG0880042392.01 | 0.836318 | 1.004091e-56 | 1.261019e-53 |
| MsG0180000698.01 | MsG0880045356.01 | 0.817371 | 3.413626e-52 | 2.481509e-49 |
| MsG0180000698.01 | MsG0880047090.01 | 0.824378 | 8.340205e-54 | 7.374358e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000698.01.T01 | MTR_1g010120 | 75.122 | 410 | 15 | 6 | 2 | 327 | 25 | 431 | 0.0 | 579 |
| MsG0180000698.01.T01 | MTR_3g108600 | 60.804 | 398 | 75 | 8 | 2 | 327 | 30 | 418 | 2.27e-158 | 452 |
| MsG0180000698.01.T01 | MTR_6g032820 | 46.988 | 415 | 126 | 8 | 2 | 326 | 25 | 435 | 4.40e-113 | 335 |
| MsG0180000698.01.T01 | MTR_4g124440 | 45.366 | 410 | 136 | 7 | 1 | 326 | 26 | 431 | 2.21e-107 | 323 |
| MsG0180000698.01.T01 | MTR_1g053320 | 43.826 | 413 | 142 | 8 | 3 | 326 | 27 | 438 | 1.43e-106 | 321 |
| MsG0180000698.01.T01 | MTR_7g085390 | 44.660 | 412 | 137 | 8 | 2 | 326 | 25 | 432 | 5.40e-106 | 319 |
| MsG0180000698.01.T01 | MTR_4g112025 | 44.068 | 413 | 139 | 8 | 2 | 326 | 30 | 438 | 2.21e-102 | 311 |
| MsG0180000698.01.T01 | MTR_8g092070 | 42.476 | 412 | 145 | 9 | 2 | 326 | 33 | 439 | 2.19e-98 | 303 |
| MsG0180000698.01.T01 | MTR_2g027560 | 41.565 | 409 | 148 | 7 | 4 | 326 | 29 | 432 | 3.20e-96 | 294 |
| MsG0180000698.01.T01 | MTR_4g134280 | 48.580 | 317 | 114 | 4 | 59 | 326 | 2 | 318 | 8.36e-96 | 289 |
| MsG0180000698.01.T01 | MTR_3g095050 | 41.220 | 410 | 151 | 10 | 2 | 326 | 33 | 437 | 3.48e-92 | 284 |
| MsG0180000698.01.T01 | MTR_3g031770 | 36.700 | 406 | 168 | 10 | 4 | 326 | 28 | 427 | 4.64e-75 | 239 |
| MsG0180000698.01.T01 | MTR_6g088885 | 29.455 | 404 | 182 | 18 | 19 | 326 | 40 | 436 | 4.94e-30 | 120 |
| MsG0180000698.01.T01 | MTR_8g102340 | 31.138 | 334 | 160 | 13 | 54 | 326 | 76 | 400 | 1.10e-29 | 119 |
| MsG0180000698.01.T01 | MTR_4g088155 | 27.979 | 386 | 189 | 17 | 23 | 326 | 61 | 439 | 1.14e-28 | 115 |
| MsG0180000698.01.T01 | MTR_4g069940 | 30.938 | 320 | 151 | 14 | 60 | 315 | 117 | 430 | 1.02e-25 | 107 |
| MsG0180000698.01.T01 | MTR_8g012400 | 25.653 | 421 | 205 | 16 | 4 | 326 | 30 | 440 | 3.66e-25 | 105 |
| MsG0180000698.01.T01 | MTR_4g076255 | 29.930 | 284 | 124 | 13 | 19 | 240 | 59 | 329 | 1.49e-23 | 99.8 |
| MsG0180000698.01.T01 | MTR_8g012400 | 27.463 | 335 | 166 | 13 | 59 | 326 | 36 | 360 | 5.59e-23 | 99.0 |
| MsG0180000698.01.T01 | MTR_1g031900 | 25.837 | 418 | 207 | 16 | 2 | 326 | 20 | 427 | 1.65e-22 | 98.6 |
| MsG0180000698.01.T01 | MTR_1g031900 | 25.837 | 418 | 207 | 16 | 2 | 326 | 20 | 427 | 2.63e-22 | 97.8 |
| MsG0180000698.01.T01 | MTR_7g053500 | 26.154 | 390 | 189 | 18 | 23 | 326 | 64 | 440 | 1.38e-21 | 95.5 |
| MsG0180000698.01.T01 | MTR_8g085720 | 24.700 | 417 | 198 | 16 | 10 | 326 | 30 | 430 | 5.56e-21 | 94.0 |
| MsG0180000698.01.T01 | MTR_7g053500 | 27.729 | 339 | 163 | 16 | 59 | 326 | 36 | 363 | 1.11e-20 | 92.4 |
| MsG0180000698.01.T01 | MTR_4g076430 | 32.018 | 228 | 100 | 7 | 59 | 240 | 109 | 327 | 1.39e-20 | 91.3 |
| MsG0180000698.01.T01 | MTR_1g052430 | 27.465 | 284 | 138 | 9 | 19 | 240 | 66 | 343 | 4.66e-20 | 90.9 |
| MsG0180000698.01.T01 | MTR_3g083580 | 25.893 | 336 | 177 | 16 | 60 | 335 | 114 | 437 | 2.36e-19 | 89.4 |
| MsG0180000698.01.T01 | MTR_1g056640 | 24.816 | 407 | 197 | 15 | 21 | 326 | 74 | 472 | 7.19e-19 | 87.8 |
| MsG0180000698.01.T01 | MTR_4g076440 | 30.263 | 228 | 104 | 8 | 59 | 240 | 109 | 327 | 2.08e-18 | 85.1 |
| MsG0180000698.01.T01 | MTR_2g034470 | 26.207 | 290 | 148 | 7 | 19 | 247 | 29 | 313 | 1.29e-17 | 82.8 |
| MsG0180000698.01.T01 | MTR_2g034470 | 26.207 | 290 | 148 | 7 | 19 | 247 | 64 | 348 | 1.31e-17 | 83.2 |
| MsG0180000698.01.T01 | MTR_7g081350 | 27.972 | 286 | 130 | 12 | 19 | 239 | 61 | 335 | 2.07e-17 | 82.4 |
| MsG0180000698.01.T01 | MTR_4g076570 | 27.208 | 283 | 138 | 9 | 19 | 239 | 56 | 332 | 2.72e-17 | 82.4 |
| MsG0180000698.01.T01 | MTR_1g007810 | 27.914 | 326 | 133 | 14 | 2 | 239 | 15 | 326 | 3.02e-17 | 82.0 |
| MsG0180000698.01.T01 | MTR_4g076490 | 27.305 | 282 | 133 | 11 | 19 | 239 | 131 | 401 | 5.54e-17 | 82.0 |
| MsG0180000698.01.T01 | MTR_2g034480 | 27.211 | 294 | 144 | 10 | 19 | 249 | 61 | 347 | 7.80e-17 | 80.9 |
| MsG0180000698.01.T01 | MTR_4g076500 | 29.412 | 272 | 117 | 11 | 35 | 240 | 126 | 388 | 1.43e-16 | 80.5 |
| MsG0180000698.01.T01 | MTR_2g034440 | 26.471 | 272 | 134 | 7 | 19 | 229 | 56 | 322 | 1.61e-16 | 79.7 |
| MsG0180000698.01.T01 | MTR_4g084480 | 27.077 | 325 | 147 | 14 | 4 | 243 | 33 | 352 | 2.09e-16 | 80.1 |
| MsG0180000698.01.T01 | MTR_4g084480 | 27.077 | 325 | 147 | 14 | 4 | 243 | 33 | 352 | 2.50e-16 | 79.7 |
| MsG0180000698.01.T01 | MTR_4g084480 | 27.077 | 325 | 147 | 14 | 4 | 243 | 26 | 345 | 2.65e-16 | 79.7 |
| MsG0180000698.01.T01 | MTR_4g076470 | 30.263 | 228 | 104 | 8 | 59 | 240 | 109 | 327 | 1.05e-15 | 77.4 |
| MsG0180000698.01.T01 | MTR_4g114850 | 26.935 | 323 | 143 | 13 | 4 | 239 | 27 | 343 | 1.14e-15 | 77.8 |
| MsG0180000698.01.T01 | MTR_4g114850 | 26.935 | 323 | 143 | 13 | 4 | 239 | 27 | 343 | 1.35e-15 | 77.4 |
| MsG0180000698.01.T01 | MTR_4g114850 | 26.935 | 323 | 143 | 13 | 4 | 239 | 27 | 343 | 1.59e-15 | 77.0 |
| MsG0180000698.01.T01 | MTR_5g078200 | 25.366 | 410 | 203 | 20 | 10 | 326 | 27 | 426 | 8.11e-15 | 75.9 |
| MsG0180000698.01.T01 | MTR_3g065460 | 25.410 | 366 | 187 | 17 | 36 | 326 | 73 | 427 | 1.11e-14 | 75.1 |
| MsG0180000698.01.T01 | MTR_5g078200 | 25.313 | 399 | 197 | 19 | 20 | 326 | 4 | 393 | 1.53e-14 | 75.1 |
| MsG0180000698.01.T01 | MTR_4g052970 | 28.523 | 298 | 130 | 14 | 37 | 264 | 79 | 363 | 4.19e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000698.01.T01 | AT4G31140 | 55.122 | 410 | 96 | 7 | 2 | 327 | 26 | 431 | 5.30e-148 | 426 |
| MsG0180000698.01.T01 | AT5G58090 | 52.078 | 409 | 108 | 7 | 4 | 327 | 23 | 428 | 1.38e-135 | 394 |
| MsG0180000698.01.T01 | AT1G64760 | 44.660 | 412 | 136 | 10 | 2 | 326 | 24 | 430 | 6.75e-104 | 313 |
| MsG0180000698.01.T01 | AT1G64760 | 44.660 | 412 | 136 | 10 | 2 | 326 | 24 | 430 | 6.75e-104 | 313 |
| MsG0180000698.01.T01 | AT3G04010 | 43.689 | 412 | 141 | 8 | 2 | 326 | 32 | 439 | 8.76e-104 | 314 |
| MsG0180000698.01.T01 | AT2G19440 | 44.903 | 412 | 135 | 10 | 2 | 326 | 20 | 426 | 4.33e-103 | 311 |
| MsG0180000698.01.T01 | AT2G19440 | 44.903 | 412 | 135 | 10 | 2 | 326 | 20 | 426 | 4.33e-103 | 311 |
| MsG0180000698.01.T01 | AT5G18220 | 44.526 | 411 | 136 | 9 | 4 | 326 | 31 | 437 | 3.01e-102 | 310 |
| MsG0180000698.01.T01 | AT5G64790 | 42.336 | 411 | 147 | 8 | 2 | 326 | 27 | 433 | 1.23e-100 | 305 |
| MsG0180000698.01.T01 | AT3G24330 | 44.660 | 412 | 134 | 11 | 4 | 326 | 40 | 446 | 4.21e-97 | 297 |
| MsG0180000698.01.T01 | AT5G20870 | 44.153 | 419 | 134 | 11 | 2 | 326 | 29 | 441 | 5.58e-96 | 294 |
| MsG0180000698.01.T01 | AT4G17180 | 42.289 | 402 | 148 | 8 | 4 | 326 | 26 | 422 | 9.24e-96 | 293 |
| MsG0180000698.01.T01 | AT5G58480 | 34.804 | 408 | 173 | 11 | 4 | 326 | 27 | 426 | 6.87e-68 | 221 |
| MsG0180000698.01.T01 | AT5G56590 | 28.460 | 383 | 188 | 15 | 21 | 326 | 62 | 435 | 6.82e-30 | 119 |
| MsG0180000698.01.T01 | AT3G55430 | 29.268 | 369 | 170 | 18 | 35 | 326 | 77 | 431 | 1.26e-28 | 115 |
| MsG0180000698.01.T01 | AT4G26830 | 26.969 | 419 | 199 | 17 | 4 | 326 | 26 | 433 | 4.85e-27 | 111 |
| MsG0180000698.01.T01 | AT4G26830 | 26.969 | 419 | 199 | 17 | 4 | 326 | 30 | 437 | 5.28e-27 | 111 |
| MsG0180000698.01.T01 | AT2G01630 | 26.747 | 415 | 191 | 16 | 10 | 326 | 27 | 426 | 1.68e-26 | 109 |
| MsG0180000698.01.T01 | AT2G01630 | 26.747 | 415 | 191 | 16 | 10 | 326 | 27 | 426 | 4.47e-26 | 108 |
| MsG0180000698.01.T01 | AT2G05790 | 27.569 | 399 | 185 | 17 | 22 | 326 | 62 | 450 | 1.66e-24 | 104 |
| MsG0180000698.01.T01 | AT3G07320 | 25.238 | 420 | 209 | 17 | 4 | 326 | 26 | 437 | 1.54e-23 | 101 |
| MsG0180000698.01.T01 | AT5G55180 | 24.691 | 405 | 215 | 15 | 21 | 343 | 63 | 459 | 5.37e-23 | 99.8 |
| MsG0180000698.01.T01 | AT5G55180 | 25.521 | 384 | 200 | 14 | 21 | 326 | 63 | 438 | 9.98e-23 | 99.0 |
| MsG0180000698.01.T01 | AT4G29360 | 25.641 | 390 | 183 | 14 | 36 | 326 | 86 | 467 | 1.50e-22 | 99.0 |
| MsG0180000698.01.T01 | AT4G29360 | 25.641 | 390 | 183 | 14 | 36 | 326 | 76 | 457 | 1.64e-22 | 99.0 |
| MsG0180000698.01.T01 | AT3G57270 | 30.035 | 283 | 130 | 10 | 19 | 239 | 61 | 337 | 4.78e-22 | 95.9 |
| MsG0180000698.01.T01 | AT3G23770 | 24.533 | 428 | 206 | 19 | 4 | 326 | 38 | 453 | 1.13e-21 | 96.3 |
| MsG0180000698.01.T01 | AT4G14080 | 26.844 | 339 | 165 | 14 | 59 | 326 | 129 | 455 | 1.18e-21 | 95.9 |
| MsG0180000698.01.T01 | AT2G39640 | 28.193 | 415 | 185 | 22 | 4 | 326 | 31 | 424 | 8.12e-21 | 94.0 |
| MsG0180000698.01.T01 | AT4G34480 | 28.012 | 332 | 158 | 15 | 60 | 326 | 3 | 318 | 1.32e-20 | 92.4 |
| MsG0180000698.01.T01 | AT4G34480 | 28.012 | 332 | 158 | 15 | 60 | 326 | 114 | 429 | 1.73e-20 | 92.8 |
| MsG0180000698.01.T01 | AT3G61810 | 29.104 | 268 | 116 | 10 | 40 | 239 | 108 | 369 | 5.47e-20 | 90.5 |
| MsG0180000698.01.T01 | AT3G57260 | 32.766 | 235 | 101 | 11 | 52 | 239 | 112 | 336 | 2.35e-19 | 88.2 |
| MsG0180000698.01.T01 | AT3G57260 | 32.766 | 235 | 101 | 11 | 52 | 239 | 128 | 352 | 2.73e-19 | 88.2 |
| MsG0180000698.01.T01 | AT5G24318 | 25.420 | 417 | 207 | 18 | 4 | 326 | 31 | 437 | 3.26e-19 | 88.6 |
| MsG0180000698.01.T01 | AT1G66250 | 24.750 | 400 | 197 | 15 | 20 | 326 | 46 | 434 | 3.33e-19 | 89.0 |
| MsG0180000698.01.T01 | AT5G24318 | 25.420 | 417 | 207 | 18 | 4 | 326 | 31 | 437 | 3.51e-19 | 88.6 |
| MsG0180000698.01.T01 | AT4G16260 | 27.397 | 292 | 140 | 11 | 19 | 247 | 29 | 311 | 2.17e-18 | 85.1 |
| MsG0180000698.01.T01 | AT4G16260 | 27.397 | 292 | 140 | 11 | 19 | 247 | 58 | 340 | 2.52e-18 | 85.1 |
| MsG0180000698.01.T01 | AT5G20340 | 28.195 | 266 | 126 | 9 | 35 | 239 | 92 | 353 | 1.88e-17 | 82.8 |
| MsG0180000698.01.T01 | AT5G20330 | 30.000 | 230 | 105 | 8 | 59 | 239 | 122 | 344 | 2.27e-17 | 82.4 |
| MsG0180000698.01.T01 | AT3G15800 | 27.019 | 322 | 145 | 12 | 4 | 239 | 44 | 361 | 2.68e-17 | 82.8 |
| MsG0180000698.01.T01 | AT2G01630 | 25.474 | 369 | 165 | 14 | 10 | 283 | 27 | 380 | 3.30e-17 | 82.4 |
| MsG0180000698.01.T01 | AT1G11820 | 23.430 | 414 | 206 | 17 | 10 | 326 | 48 | 447 | 4.21e-17 | 82.8 |
| MsG0180000698.01.T01 | AT1G11820 | 23.430 | 414 | 206 | 17 | 10 | 326 | 48 | 447 | 4.22e-17 | 82.4 |
| MsG0180000698.01.T01 | AT5G20390 | 26.498 | 317 | 145 | 12 | 4 | 239 | 34 | 343 | 6.12e-17 | 81.3 |
| MsG0180000698.01.T01 | AT3G13560 | 24.213 | 413 | 203 | 17 | 10 | 326 | 30 | 428 | 2.77e-16 | 80.1 |
| MsG0180000698.01.T01 | AT3G13560 | 24.213 | 413 | 203 | 17 | 10 | 326 | 30 | 428 | 2.77e-16 | 80.1 |
| MsG0180000698.01.T01 | AT3G13560 | 24.213 | 413 | 203 | 17 | 10 | 326 | 30 | 428 | 2.77e-16 | 80.1 |
| MsG0180000698.01.T01 | AT3G13560 | 24.213 | 413 | 203 | 17 | 10 | 326 | 30 | 428 | 2.77e-16 | 80.1 |
| MsG0180000698.01.T01 | AT3G13560 | 24.213 | 413 | 203 | 17 | 10 | 326 | 30 | 428 | 2.77e-16 | 80.1 |
| MsG0180000698.01.T01 | AT5G42720 | 31.970 | 269 | 112 | 14 | 60 | 268 | 114 | 371 | 3.19e-15 | 76.6 |
| MsG0180000698.01.T01 | AT1G33220 | 29.126 | 206 | 116 | 6 | 19 | 196 | 68 | 271 | 7.18e-15 | 75.1 |
| MsG0180000698.01.T01 | AT2G26600 | 28.000 | 275 | 121 | 12 | 36 | 239 | 83 | 351 | 1.10e-14 | 75.1 |
| MsG0180000698.01.T01 | AT2G26600 | 28.814 | 236 | 106 | 10 | 60 | 239 | 28 | 257 | 2.25e-14 | 73.2 |
| MsG0180000698.01.T01 | AT5G20560 | 26.378 | 254 | 124 | 7 | 36 | 229 | 84 | 334 | 1.04e-13 | 71.6 |
| MsG0180000698.01.T01 | AT3G57240 | 26.545 | 275 | 139 | 8 | 19 | 237 | 69 | 336 | 1.08e-13 | 71.6 |
| MsG0180000698.01.T01 | AT5G24318 | 25.776 | 322 | 149 | 13 | 4 | 241 | 31 | 346 | 1.20e-13 | 71.6 |
| MsG0180000698.01.T01 | AT1G32860 | 27.311 | 238 | 109 | 10 | 60 | 239 | 116 | 347 | 1.65e-12 | 68.6 |
| MsG0180000698.01.T01 | AT1G77780 | 25.455 | 275 | 133 | 9 | 36 | 246 | 73 | 339 | 9.59e-11 | 62.8 |
Find 86 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATAGTCGACTGGAAAAT+TGG | 0.169551 | 1:+9893714 | None:intergenic |
| ACCGATCTCTCCAACAATTA+TGG | 0.179022 | 1:+9893573 | None:intergenic |
| ATCTTTCCGTTGTCGTTTAA+AGG | 0.202599 | 1:+9893670 | None:intergenic |
| CGCTCTTATAAAAGCTGGTT+TGG | 0.202719 | 1:-9893922 | MsG0180000698.01.T01:CDS |
| AGTCGTCAAGCTGCTGAAAA+TGG | 0.223271 | 1:-9895682 | MsG0180000698.01.T01:CDS |
| CTTGATGCTTTAAAGAAATC+TGG | 0.226533 | 1:-9895756 | MsG0180000698.01.T01:intron |
| GACTAGTGCAGTCTGCATTT+TGG | 0.234926 | 1:+9893195 | None:intergenic |
| TGATGGCGCTTGCAAATTTC+CGG | 0.236098 | 1:-9893084 | MsG0180000698.01.T01:CDS |
| GGATAAATGTTCACGGTAAA+TGG | 0.262811 | 1:+9893760 | None:intergenic |
| AAATGATTTGCTTTATACTA+TGG | 0.263703 | 1:-9895710 | MsG0180000698.01.T01:CDS |
| TTTCAAAATACACCACTTCT+TGG | 0.304045 | 1:+9893271 | None:intergenic |
| CTAACTATGATACTCTAGTA+TGG | 0.317827 | 1:-9893627 | MsG0180000698.01.T01:CDS |
| AATCAGTTTGGATCATGATT+TGG | 0.323082 | 1:+9893013 | None:intergenic |
| TCTTCATAAAGACTAATAAA+AGG | 0.350618 | 1:+9893739 | None:intergenic |
| GTGCAACTTGATCACTGTTC+AGG | 0.355760 | 1:+9893237 | None:intergenic |
| CAGGTAACTTTGAACGTCAT+TGG | 0.361509 | 1:-9893388 | MsG0180000698.01.T01:CDS |
| AGGTAACTTTGAACGTCATT+GGG | 0.365853 | 1:-9893387 | MsG0180000698.01.T01:CDS |
| GCGTTGAATAAGAATGGTTT+TGG | 0.368555 | 1:-9893604 | MsG0180000698.01.T01:CDS |
| CCGATCTCTCCAACAATTAT+GGG | 0.378662 | 1:+9893574 | None:intergenic |
| CCAATGGTGAGTTGGTATTT+CGG | 0.383764 | 1:+9893341 | None:intergenic |
| TTCAAAATACACCACTTCTT+GGG | 0.402891 | 1:+9893272 | None:intergenic |
| GTGAAAATGTTAAAAGATAA+TGG | 0.403732 | 1:-9895818 | MsG0180000698.01.T01:intron |
| GTGTTGGAAGTGGGTGGAAT+TGG | 0.404650 | 1:-9895889 | MsG0180000698.01.T01:CDS |
| AGAAATCTGGGATTCAGTTA+TGG | 0.419324 | 1:-9895743 | MsG0180000698.01.T01:CDS |
| GGGTGGAATTGGAGTGAACT+GGG | 0.423782 | 1:-9895878 | MsG0180000698.01.T01:CDS |
| TGGGTGGAATTGGAGTGAAC+TGG | 0.426991 | 1:-9895879 | MsG0180000698.01.T01:CDS |
| TCCATTGAGACCTGGTCCTA+TGG | 0.429507 | 1:-9893459 | MsG0180000698.01.T01:CDS |
| CCCATAATTGTTGGAGAGAT+CGG | 0.432044 | 1:-9893574 | MsG0180000698.01.T01:intron |
| GCATAGTCGACTGGAAAATT+GGG | 0.440341 | 1:+9893715 | None:intergenic |
| GCTCTTATAAAAGCTGGTTT+GGG | 0.442512 | 1:-9893921 | MsG0180000698.01.T01:CDS |
| ATAGTATAAAGCAAATCATT+TGG | 0.452724 | 1:+9895712 | None:intergenic |
| GGTAACATGCCCATAATTGT+TGG | 0.454864 | 1:-9893583 | MsG0180000698.01.T01:CDS |
| CAAAACGCTCTTATAAAAGC+TGG | 0.455309 | 1:-9893927 | MsG0180000698.01.T01:CDS |
| TTGATGCTTTAAAGAAATCT+GGG | 0.455709 | 1:-9895755 | MsG0180000698.01.T01:intron |
| GTCGTCAAGCTGCTGAAAAT+GGG | 0.457739 | 1:-9895681 | MsG0180000698.01.T01:intron |
| TGCGTTTAATAGCTACTATC+AGG | 0.464738 | 1:-9893120 | MsG0180000698.01.T01:CDS |
| CAGGTGAATGATCAGGTTGA+TGG | 0.470214 | 1:-9893101 | MsG0180000698.01.T01:CDS |
| GATGTGTATCAGAGCTCATC+AGG | 0.478752 | 1:-9893864 | MsG0180000698.01.T01:intron |
| CTACTATCAGGTGAATGATC+AGG | 0.483380 | 1:-9893108 | MsG0180000698.01.T01:CDS |
| TGATACACATCAGCATTTGA+AGG | 0.486649 | 1:+9893876 | None:intergenic |
| TGACAGAGATCCTTCAACTC+AGG | 0.492465 | 1:-9893046 | MsG0180000698.01.T01:CDS |
| CCGAAATACCAACTCACCAT+TGG | 0.493738 | 1:-9893341 | MsG0180000698.01.T01:CDS |
| CCCGTTGGTTCTTGATCCAA+TGG | 0.499872 | 1:+9893325 | None:intergenic |
| AATGCAGACTGCACTAGTCT+TGG | 0.500089 | 1:-9893191 | MsG0180000698.01.T01:CDS |
| GTATGGGCGTTGAATAAGAA+TGG | 0.500864 | 1:-9893610 | MsG0180000698.01.T01:CDS |
| ACCACAGTAGATGGTGGTAA+TGG | 0.502268 | 1:+9895839 | None:intergenic |
| TCCATAGGACCAGGTCTCAA+TGG | 0.502603 | 1:+9893458 | None:intergenic |
| CAATGACGTTCAAAGTTACC+TGG | 0.520270 | 1:+9893389 | None:intergenic |
| TCAAGAACCAACGGGCTAGT+AGG | 0.521826 | 1:-9893317 | MsG0180000698.01.T01:CDS |
| TGGAAGTGTTGTGGCTTCAA+AGG | 0.524842 | 1:+9893965 | None:intergenic |
| TACAAGAGCTGGAAGTGTTG+TGG | 0.534283 | 1:+9893956 | None:intergenic |
| ATCTGGGATTCAGTTATGGT+TGG | 0.534348 | 1:-9895739 | MsG0180000698.01.T01:CDS |
| GTCAGTGACAGTAGAAAGAC+CGG | 0.539991 | 1:+9893065 | None:intergenic |
| GGCTATGGAACTTCGTGTGG+CGG | 0.546145 | 1:-9893170 | MsG0180000698.01.T01:CDS |
| TTCTTGATCCAATGGTGAGT+TGG | 0.549706 | 1:+9893333 | None:intergenic |
| ATCACTGTTCAGGTTCGCTG+AGG | 0.550563 | 1:+9893247 | None:intergenic |
| AATAAAAGGATAAATGTTCA+CGG | 0.560448 | 1:+9893753 | None:intergenic |
| AATGTGCAACCCTGAGTTGA+AGG | 0.566126 | 1:+9893036 | None:intergenic |
| CTTGGGCAAATGTGCTACTC+CGG | 0.568572 | 1:+9893289 | None:intergenic |
| ACCATTGGATCAAGAACCAA+CGG | 0.573644 | 1:-9893326 | MsG0180000698.01.T01:CDS |
| GACAGAGATCCTTCAACTCA+GGG | 0.576853 | 1:-9893045 | MsG0180000698.01.T01:CDS |
| TAACTATGATACTCTAGTAT+GGG | 0.577250 | 1:-9893626 | MsG0180000698.01.T01:CDS |
| CCGTTGTAAGTTGACAAGAA+AGG | 0.578866 | 1:+9893990 | None:intergenic |
| CTAAACAAGTATGCATCCAT+AGG | 0.581623 | 1:+9893443 | None:intergenic |
| GACTGCACTAGTCTTGGCTA+TGG | 0.584565 | 1:-9893185 | MsG0180000698.01.T01:CDS |
| CCTTTCTTGTCAACTTACAA+CGG | 0.587520 | 1:-9893990 | MsG0180000698.01.T01:CDS |
| AACGGGCTAGTAGGTGCTAC+CGG | 0.592787 | 1:-9893308 | MsG0180000698.01.T01:CDS |
| GATACACATCAGCATTTGAA+GGG | 0.593720 | 1:+9893877 | None:intergenic |
| CCATTGGATCAAGAACCAAC+GGG | 0.594581 | 1:-9893325 | MsG0180000698.01.T01:CDS |
| TCACTGTTCAGGTTCGCTGA+GGG | 0.597689 | 1:+9893248 | None:intergenic |
| TACATCATCAGTGTTGGAAG+TGG | 0.598120 | 1:-9895899 | None:intergenic |
| CTTGGCTATGGAACTTCGTG+TGG | 0.608758 | 1:-9893173 | MsG0180000698.01.T01:CDS |
| AGTGATCCTTTAAACGACAA+CGG | 0.610182 | 1:-9893676 | MsG0180000698.01.T01:CDS |
| TAGCACATTTGCCCAAGAAG+TGG | 0.619134 | 1:-9893283 | MsG0180000698.01.T01:CDS |
| TCATCAGTGTTGGAAGTGGG+TGG | 0.622950 | 1:-9895895 | None:intergenic |
| AAGTATGCATCCATAGGACC+AGG | 0.624541 | 1:+9893449 | None:intergenic |
| GGTAACTTTGAACGTCATTG+GGG | 0.647034 | 1:-9893386 | MsG0180000698.01.T01:CDS |
| GGTAGCACCTACTAGCCCGT+TGG | 0.654363 | 1:+9893310 | None:intergenic |
| AAAGGGACTCCATTGAGACC+TGG | 0.654522 | 1:-9893467 | MsG0180000698.01.T01:intron |
| ACATCATCAGTGTTGGAAGT+GGG | 0.655681 | 1:-9895898 | None:intergenic |
| TGGCAAGCATAAGACACACT+CGG | 0.661204 | 1:+9893215 | None:intergenic |
| TCCATTACCACCATCTACTG+TGG | 0.670093 | 1:-9895840 | MsG0180000698.01.T01:CDS |
| GACAACAAAAGCATTCAACC+AGG | 0.676173 | 1:-9893407 | MsG0180000698.01.T01:CDS |
| GGTGGAATTGGAGTGAACTG+GGG | 0.692379 | 1:-9895877 | MsG0180000698.01.T01:CDS |
| TGTGGCGGTTTAGATATCCG+TGG | 0.708567 | 1:-9893155 | MsG0180000698.01.T01:CDS |
| ACGCATATGAGATGTTACCA+CGG | 0.737125 | 1:+9893138 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATATTGATGTAAATA+CGG | - | Chr1:9894706-9894725 | MsG0180000698.01.T01:intron | 10.0% |
| !! | AATTAGACAAAATTTATGTA+AGG | - | Chr1:9893519-9893538 | MsG0180000698.01.T01:intron | 15.0% |
| !! | GTATTTACATCAATATAAAA+AGG | + | Chr1:9894707-9894726 | None:intergenic | 15.0% |
| !!! | AATACAATTTTGAAGATTAA+TGG | - | Chr1:9894110-9894129 | MsG0180000698.01.T01:intron | 15.0% |
| !!! | ATGTAAAAAGTACTTTTTTA+TGG | + | Chr1:9893456-9893475 | None:intergenic | 15.0% |
| !!! | ATTTCATGTAATTTTTTTCA+AGG | - | Chr1:9894878-9894897 | MsG0180000698.01.T01:intron | 15.0% |
| !!! | GTTAAATATGATTTTACTTA+GGG | + | Chr1:9893716-9893735 | None:intergenic | 15.0% |
| !!! | TATTTATTTATTCTGCATTT+TGG | - | Chr1:9893384-9893403 | MsG0180000698.01.T01:CDS | 15.0% |
| !!! | TTTTATATTGATGTAAATAC+GGG | - | Chr1:9894707-9894726 | MsG0180000698.01.T01:intron | 15.0% |
| !! | AAAACAAATAGAAAACAAAC+AGG | + | Chr1:9894269-9894288 | None:intergenic | 20.0% |
| !! | AATAAAAGGATAAATGTTCA+CGG | + | Chr1:9895162-9895181 | None:intergenic | 20.0% |
| !! | ACAAATCATAGAAGAATATT+TGG | - | Chr1:9894352-9894371 | MsG0180000698.01.T01:intron | 20.0% |
| !! | ATAGTATAAAGCAAATCATT+TGG | + | Chr1:9893203-9893222 | None:intergenic | 20.0% |
| !! | CATATTTAACCATCTATATA+CGG | - | Chr1:9893726-9893745 | MsG0180000698.01.T01:CDS | 20.0% |
| !! | GAATCAGATTATTAAAAATC+AGG | + | Chr1:9893779-9893798 | None:intergenic | 20.0% |
| !! | GTGAAAATGTTAAAAGATAA+TGG | - | Chr1:9893094-9893113 | MsG0180000698.01.T01:CDS | 20.0% |
| !! | TCTTCATAAAGACTAATAAA+AGG | + | Chr1:9895176-9895195 | None:intergenic | 20.0% |
| !! | TTAATTAAAACATTGACAAC+AGG | + | Chr1:9894529-9894548 | None:intergenic | 20.0% |
| !! | TTACTTTACTTGTATATAGA+TGG | + | Chr1:9893803-9893822 | None:intergenic | 20.0% |
| !!! | AAATGATTTGCTTTATACTA+TGG | - | Chr1:9893202-9893221 | MsG0180000698.01.T01:CDS | 20.0% |
| !!! | AATCACTATTTTCTTTTGTA+GGG | + | Chr1:9893497-9893516 | None:intergenic | 20.0% |
| !!! | AATCATATATTTTTCCTAAC+AGG | + | Chr1:9894594-9894613 | None:intergenic | 20.0% |
| !!! | AGATTTTTTCAACAACTTTT+TGG | - | Chr1:9894382-9894401 | MsG0180000698.01.T01:intron | 20.0% |
| !!! | GGTTAAATATGATTTTACTT+AGG | + | Chr1:9893717-9893736 | None:intergenic | 20.0% |
| !!! | GTCAATGTTTTAATTAAATG+AGG | - | Chr1:9894532-9894551 | MsG0180000698.01.T01:intron | 20.0% |
| !!! | TAATCACTATTTTCTTTTGT+AGG | + | Chr1:9893498-9893517 | None:intergenic | 20.0% |
| !!! | TTTTCATTTCTTAATCTGTT+GGG | - | Chr1:9894769-9894788 | MsG0180000698.01.T01:intron | 20.0% |
| !!! | TTTTTCATTTCTTAATCTGT+TGG | - | Chr1:9894768-9894787 | MsG0180000698.01.T01:intron | 20.0% |
| ! | AGTCATTTGTTTAACAGTTA+AGG | + | Chr1:9894808-9894827 | None:intergenic | 25.0% |
| ! | ATTTGTAGATGAAGAATCAA+GGG | + | Chr1:9894338-9894357 | None:intergenic | 25.0% |
| ! | TAACTATGATACTCTAGTAT+GGG | - | Chr1:9895286-9895305 | MsG0180000698.01.T01:intron | 25.0% |
| ! | TTGATTAATTTAGCTGCAAA+AGG | - | Chr1:9894454-9894473 | MsG0180000698.01.T01:intron | 25.0% |
| !! | AAATATGATTTTACTTAGGG+AGG | + | Chr1:9893713-9893732 | None:intergenic | 25.0% |
| !! | AAGTATTTTATTGGAAGGAA+AGG | - | Chr1:9893894-9893913 | MsG0180000698.01.T01:CDS | 25.0% |
| !! | AATATGATTTTACTTAGGGA+GGG | + | Chr1:9893712-9893731 | None:intergenic | 25.0% |
| !! | ACATCAAGTATTTTATTGGA+AGG | - | Chr1:9893889-9893908 | MsG0180000698.01.T01:CDS | 25.0% |
| !! | AGTATTTTATTGGAAGGAAA+GGG | - | Chr1:9893895-9893914 | MsG0180000698.01.T01:CDS | 25.0% |
| !! | ATATGTCTTCCTAACTTTTT+GGG | - | Chr1:9894649-9894668 | MsG0180000698.01.T01:intron | 25.0% |
| !! | CAACACATCAAGTATTTTAT+TGG | - | Chr1:9893885-9893904 | MsG0180000698.01.T01:CDS | 25.0% |
| !! | TGTGTTGAGTTTTTAATCTT+TGG | - | Chr1:9893327-9893346 | MsG0180000698.01.T01:CDS | 25.0% |
| !! | TTTAGTAAGAAAGTTTTTGC+AGG | - | Chr1:9893947-9893966 | MsG0180000698.01.T01:CDS | 25.0% |
| !! | TTTTTGCAGGAACTTTTTAT+AGG | - | Chr1:9893960-9893979 | MsG0180000698.01.T01:CDS | 25.0% |
| !!! | ATTTTTTTCAAGGTACATTG+CGG | - | Chr1:9894888-9894907 | MsG0180000698.01.T01:intron | 25.0% |
| !!! | CTTTAAAGCATCAAGAATAT+TGG | + | Chr1:9893151-9893170 | None:intergenic | 25.0% |
| !!! | TTGATGCTTTAAAGAAATCT+GGG | - | Chr1:9893157-9893176 | MsG0180000698.01.T01:CDS | 25.0% |
| AAGTGAAGACATATTTAACC+AGG | - | Chr1:9893577-9893596 | MsG0180000698.01.T01:CDS | 30.0% | |
| AGTGAAGACATATTTAACCA+GGG | - | Chr1:9893578-9893597 | MsG0180000698.01.T01:CDS | 30.0% | |
| AGTTATAATGTCTGCCAAAA+AGG | - | Chr1:9894306-9894325 | MsG0180000698.01.T01:intron | 30.0% | |
| CTAACTATGATACTCTAGTA+TGG | - | Chr1:9895285-9895304 | MsG0180000698.01.T01:intron | 30.0% | |
| GACAAGTAATTTCCATACAT+CGG | + | Chr1:9894179-9894198 | None:intergenic | 30.0% | |
| GATTTGTAGATGAAGAATCA+AGG | + | Chr1:9894339-9894358 | None:intergenic | 30.0% | |
| GGTTATGATTGTTTCAAACT+AGG | - | Chr1:9893405-9893424 | MsG0180000698.01.T01:CDS | 30.0% | |
| GTTGCATGCATAAAATCTAA+AGG | - | Chr1:9894623-9894642 | MsG0180000698.01.T01:intron | 30.0% | |
| TTCAAAATACACCACTTCTT+GGG | + | Chr1:9895643-9895662 | None:intergenic | 30.0% | |
| TTTCAAAATACACCACTTCT+TGG | + | Chr1:9895644-9895663 | None:intergenic | 30.0% | |
| TTTGTAGATGAAGAATCAAG+GGG | + | Chr1:9894337-9894356 | None:intergenic | 30.0% | |
| ! | GATATGTCTTCCTAACTTTT+TGG | - | Chr1:9894648-9894667 | MsG0180000698.01.T01:intron | 30.0% |
| ! | TATGTCTTCCTAACTTTTTG+GGG | - | Chr1:9894650-9894669 | MsG0180000698.01.T01:intron | 30.0% |
| ! | TGTGTTTGAAATCATTGACT+AGG | - | Chr1:9894233-9894252 | MsG0180000698.01.T01:intron | 30.0% |
| ! | TTTTGGATATTTACAAGAGC+TGG | + | Chr1:9894970-9894989 | None:intergenic | 30.0% |
| !! | CTTGATGCTTTAAAGAAATC+TGG | - | Chr1:9893156-9893175 | MsG0180000698.01.T01:CDS | 30.0% |
| !! | GATTGTTTTATTACGATGGA+CGG | - | Chr1:9895548-9895567 | MsG0180000698.01.T01:intron | 30.0% |
| AAATTTCACACTGACCTGTT+AGG | - | Chr1:9894577-9894596 | MsG0180000698.01.T01:intron | 35.0% | |
| ACTAAGATACTTCCGATGTA+TGG | - | Chr1:9894164-9894183 | MsG0180000698.01.T01:intron | 35.0% | |
| AGGTAACTTTGAACGTCATT+GGG | - | Chr1:9895525-9895544 | MsG0180000698.01.T01:intron | 35.0% | |
| AGTATGTATTGCTGTGAGTT+TGG | - | Chr1:9894052-9894071 | MsG0180000698.01.T01:intron | 35.0% | |
| AGTGATCCTTTAAACGACAA+CGG | - | Chr1:9895236-9895255 | MsG0180000698.01.T01:intron | 35.0% | |
| CAAAACGCTCTTATAAAAGC+TGG | - | Chr1:9894985-9895004 | MsG0180000698.01.T01:intron | 35.0% | |
| CCTTTCTTGTCAACTTACAA+CGG | - | Chr1:9894922-9894941 | MsG0180000698.01.T01:intron | 35.0% | |
| CTAAACAAGTATGCATCCAT+AGG | + | Chr1:9895472-9895491 | None:intergenic | 35.0% | |
| GAAATTACTTGTCGTTCCTT+TGG | - | Chr1:9894186-9894205 | MsG0180000698.01.T01:intron | 35.0% | |
| GATACACATCAGCATTTGAA+GGG | + | Chr1:9895038-9895057 | None:intergenic | 35.0% | |
| GATTCCACTAAGTATTCCAA+AGG | + | Chr1:9894205-9894224 | None:intergenic | 35.0% | |
| GGATAAATGTTCACGGTAAA+TGG | + | Chr1:9895155-9895174 | None:intergenic | 35.0% | |
| TAAATCGAGTCATGAAACCT+TGG | + | Chr1:9895418-9895437 | None:intergenic | 35.0% | |
| TCTCTTGAACAATTCGTCTT+TGG | + | Chr1:9893633-9893652 | None:intergenic | 35.0% | |
| TGATACACATCAGCATTTGA+AGG | + | Chr1:9895039-9895058 | None:intergenic | 35.0% | |
| TGATTGTTTCAAACTAGGAG+AGG | - | Chr1:9893410-9893429 | MsG0180000698.01.T01:CDS | 35.0% | |
| TGCGTTTAATAGCTACTATC+AGG | - | Chr1:9895792-9895811 | MsG0180000698.01.T01:intron | 35.0% | |
| TTCATGACTCGATTTATTGC+CGG | - | Chr1:9895422-9895441 | MsG0180000698.01.T01:intron | 35.0% | |
| TTGAAAAATGCATAGTCGAC+TGG | + | Chr1:9895209-9895228 | None:intergenic | 35.0% | |
| ! | AACATTTTCACCACAGTAGA+TGG | + | Chr1:9893085-9893104 | None:intergenic | 35.0% |
| ! | AGAAATCTGGGATTCAGTTA+TGG | - | Chr1:9893169-9893188 | MsG0180000698.01.T01:CDS | 35.0% |
| ! | ATCTTTCCGTTGTCGTTTAA+AGG | + | Chr1:9895245-9895264 | None:intergenic | 35.0% |
| ! | ATGTCTTCCTAACTTTTTGG+GGG | - | Chr1:9894651-9894670 | MsG0180000698.01.T01:intron | 35.0% |
| ! | GCGTTGAATAAGAATGGTTT+TGG | - | Chr1:9895308-9895327 | MsG0180000698.01.T01:intron | 35.0% |
| ! | GCTCTTATAAAAGCTGGTTT+GGG | - | Chr1:9894991-9895010 | MsG0180000698.01.T01:intron | 35.0% |
| ! | TGCAGGAACTTTTTATAGGA+TGG | - | Chr1:9893964-9893983 | MsG0180000698.01.T01:CDS | 35.0% |
| !! | CAACAGGTTGATATTTGTAC+AGG | + | Chr1:9894513-9894532 | None:intergenic | 35.0% |
| !! | GTCGACTATGCATTTTTCAA+CGG | - | Chr1:9895209-9895228 | MsG0180000698.01.T01:intron | 35.0% |
| !! | TGGGGATTGTTTTATTACGA+TGG | - | Chr1:9895544-9895563 | MsG0180000698.01.T01:intron | 35.0% |
| !!! | CAGCTTTTATAAGAGCGTTT+TGG | + | Chr1:9894987-9895006 | None:intergenic | 35.0% |
| ACCATTGGATCAAGAACCAA+CGG | - | Chr1:9895586-9895605 | MsG0180000698.01.T01:intron | 40.0% | |
| ACCGATCTCTCCAACAATTA+TGG | + | Chr1:9895342-9895361 | None:intergenic | 40.0% | |
| ACGCATATGAGATGTTACCA+CGG | + | Chr1:9895777-9895796 | None:intergenic | 40.0% | |
| ACTCGATTTATTGCCGGAAA+GGG | - | Chr1:9895428-9895447 | MsG0180000698.01.T01:intron | 40.0% | |
| ATGTAAATACGGGCAATTGC+GGG | - | Chr1:9894717-9894736 | MsG0180000698.01.T01:intron | 40.0% | |
| CAATCTGAACCATGAGATCA+TGG | + | Chr1:9895107-9895126 | None:intergenic | 40.0% | |
| CAATGACGTTCAAAGTTACC+TGG | + | Chr1:9895526-9895545 | None:intergenic | 40.0% | |
| CAGGTAACTTTGAACGTCAT+TGG | - | Chr1:9895524-9895543 | MsG0180000698.01.T01:intron | 40.0% | |
| CCCATAATTGTTGGAGAGAT+CGG | - | Chr1:9895338-9895357 | MsG0180000698.01.T01:intron | 40.0% | |
| CCGATCTCTCCAACAATTAT+GGG | + | Chr1:9895341-9895360 | None:intergenic | 40.0% | |
| CGCTCTTATAAAAGCTGGTT+TGG | - | Chr1:9894990-9895009 | MsG0180000698.01.T01:intron | 40.0% | |
| CTACTATCAGGTGAATGATC+AGG | - | Chr1:9895804-9895823 | MsG0180000698.01.T01:intron | 40.0% | |
| GACGAACAGAGATTGTACTA+GGG | + | Chr1:9893752-9893771 | None:intergenic | 40.0% | |
| GATATTTGTACAGGTGGACA+AGG | + | Chr1:9894504-9894523 | None:intergenic | 40.0% | |
| GATGTAAATACGGGCAATTG+CGG | - | Chr1:9894716-9894735 | MsG0180000698.01.T01:intron | 40.0% | |
| GCATAGTCGACTGGAAAATT+GGG | + | Chr1:9895200-9895219 | None:intergenic | 40.0% | |
| GGAGAGGTGAGAAATTATAG+TGG | - | Chr1:9893426-9893445 | MsG0180000698.01.T01:CDS | 40.0% | |
| GGTAACATGCCCATAATTGT+TGG | - | Chr1:9895329-9895348 | MsG0180000698.01.T01:intron | 40.0% | |
| GGTAACTTTGAACGTCATTG+GGG | - | Chr1:9895526-9895545 | MsG0180000698.01.T01:intron | 40.0% | |
| GTTTCAGCTCATGTTTCATC+TGG | - | Chr1:9893265-9893284 | MsG0180000698.01.T01:CDS | 40.0% | |
| TAATTGTTGGAGAGATCGGT+TGG | - | Chr1:9895342-9895361 | MsG0180000698.01.T01:intron | 40.0% | |
| TGACGAACAGAGATTGTACT+AGG | + | Chr1:9893753-9893772 | None:intergenic | 40.0% | |
| TGCATAGTCGACTGGAAAAT+TGG | + | Chr1:9895201-9895220 | None:intergenic | 40.0% | |
| TTCTTGATCCAATGGTGAGT+TGG | + | Chr1:9895582-9895601 | None:intergenic | 40.0% | |
| ! | ATCTGGGATTCAGTTATGGT+TGG | - | Chr1:9893173-9893192 | MsG0180000698.01.T01:CDS | 40.0% |
| ! | ATTTTCACCACAGTAGATGG+TGG | + | Chr1:9893082-9893101 | None:intergenic | 40.0% |
| ! | CCGTTGTAAGTTGACAAGAA+AGG | + | Chr1:9894925-9894944 | None:intergenic | 40.0% |
| !! | CAGGTTGATATTTGTACAGG+TGG | + | Chr1:9894510-9894529 | None:intergenic | 40.0% |
| !! | CCAATGGTGAGTTGGTATTT+CGG | + | Chr1:9895574-9895593 | None:intergenic | 40.0% |
| !! | CGTTCCTTTGGAATACTTAG+TGG | - | Chr1:9894198-9894217 | MsG0180000698.01.T01:intron | 40.0% |
| !! | GACAACAAAAGCATTCAACC+AGG | - | Chr1:9895505-9895524 | MsG0180000698.01.T01:intron | 40.0% |
| !! | GTATGGGCGTTGAATAAGAA+TGG | - | Chr1:9895302-9895321 | MsG0180000698.01.T01:intron | 40.0% |
| !! | TTTTCAAGGTACATTGCGGT+TGG | - | Chr1:9894892-9894911 | MsG0180000698.01.T01:intron | 40.0% |
| AAGTATGCATCCATAGGACC+AGG | + | Chr1:9895466-9895485 | None:intergenic | 45.0% | |
| AGTCAAATGCAGAAGAGAGG+GGG | + | Chr1:9894016-9894035 | None:intergenic | 45.0% | |
| AGTCGTCAAGCTGCTGAAAA+TGG | - | Chr1:9893230-9893249 | MsG0180000698.01.T01:CDS | 45.0% | |
| CATCTGGTGGAGTAGATATC+AGG | - | Chr1:9893281-9893300 | MsG0180000698.01.T01:CDS | 45.0% | |
| CCATTGGATCAAGAACCAAC+GGG | - | Chr1:9895587-9895606 | MsG0180000698.01.T01:intron | 45.0% | |
| CCGAAATACCAACTCACCAT+TGG | - | Chr1:9895571-9895590 | MsG0180000698.01.T01:intron | 45.0% | |
| CCTCTCTTCTGCATTTGACT+CGG | - | Chr1:9894016-9894035 | MsG0180000698.01.T01:intron | 45.0% | |
| CGAGTCAAATGCAGAAGAGA+GGG | + | Chr1:9894018-9894037 | None:intergenic | 45.0% | |
| CTTGCTTGCACTGAATTCAG+TGG | - | Chr1:9894425-9894444 | MsG0180000698.01.T01:intron | 45.0% | |
| GACAGACATCCATGATCTCA+TGG | - | Chr1:9895095-9895114 | MsG0180000698.01.T01:intron | 45.0% | |
| GACAGAGATCCTTCAACTCA+GGG | - | Chr1:9895867-9895886 | MsG0180000698.01.T01:CDS | 45.0% | |
| GACAGCCACCCAAATTACAA+GGG | - | Chr1:9893686-9893705 | MsG0180000698.01.T01:CDS | 45.0% | |
| GACTCGATTTATTGCCGGAA+AGG | - | Chr1:9895427-9895446 | MsG0180000698.01.T01:intron | 45.0% | |
| GAGTCAAATGCAGAAGAGAG+GGG | + | Chr1:9894017-9894036 | None:intergenic | 45.0% | |
| GATGTGTATCAGAGCTCATC+AGG | - | Chr1:9895048-9895067 | MsG0180000698.01.T01:intron | 45.0% | |
| GTACAGGTGGACAAGGATTT+AGG | + | Chr1:9894497-9894516 | None:intergenic | 45.0% | |
| GTACTAGGGCCGTATATAGA+TGG | + | Chr1:9893738-9893757 | None:intergenic | 45.0% | |
| GTCAGTGACAGTAGAAAGAC+CGG | + | Chr1:9895850-9895869 | None:intergenic | 45.0% | |
| GTCGTCAAGCTGCTGAAAAT+GGG | - | Chr1:9893231-9893250 | MsG0180000698.01.T01:CDS | 45.0% | |
| GTGCAACTTGATCACTGTTC+AGG | + | Chr1:9895678-9895697 | None:intergenic | 45.0% | |
| TAGCACATTTGCCCAAGAAG+TGG | - | Chr1:9895629-9895648 | MsG0180000698.01.T01:intron | 45.0% | |
| TCAGCTCATGTTTCATCTGG+TGG | - | Chr1:9893268-9893287 | MsG0180000698.01.T01:CDS | 45.0% | |
| TCCATTACCACCATCTACTG+TGG | - | Chr1:9893072-9893091 | MsG0180000698.01.T01:CDS | 45.0% | |
| TGACAGAGATCCTTCAACTC+AGG | - | Chr1:9895866-9895885 | MsG0180000698.01.T01:CDS | 45.0% | |
| TGACAGCCACCCAAATTACA+AGG | - | Chr1:9893685-9893704 | MsG0180000698.01.T01:CDS | 45.0% | |
| TGGCAAGCATAAGACACACT+CGG | + | Chr1:9895700-9895719 | None:intergenic | 45.0% | |
| TGGTGGAGTAGATATCAGGT+TGG | - | Chr1:9893285-9893304 | MsG0180000698.01.T01:CDS | 45.0% | |
| TGTAAATACGGGCAATTGCG+GGG | - | Chr1:9894718-9894737 | MsG0180000698.01.T01:intron | 45.0% | |
| TGTATTGCTGTGAGTTTGGC+AGG | - | Chr1:9894056-9894075 | MsG0180000698.01.T01:intron | 45.0% | |
| ! | AATGCAGACTGCACTAGTCT+TGG | - | Chr1:9895721-9895740 | MsG0180000698.01.T01:CDS | 45.0% |
| ! | AATGTGCAACCCTGAGTTGA+AGG | + | Chr1:9895879-9895898 | None:intergenic | 45.0% |
| ! | ACCACAGTAGATGGTGGTAA+TGG | + | Chr1:9893076-9893095 | None:intergenic | 45.0% |
| ! | GACTAGTGCAGTCTGCATTT+TGG | + | Chr1:9895720-9895739 | None:intergenic | 45.0% |
| ! | TGATGGCGCTTGCAAATTTC+CGG | - | Chr1:9895828-9895847 | MsG0180000698.01.T01:CDS | 45.0% |
| !! | ATCAAGGGGCATGTCCTTTT+TGG | + | Chr1:9894323-9894342 | None:intergenic | 45.0% |
| !! | CAGGTGAATGATCAGGTTGA+TGG | - | Chr1:9895811-9895830 | MsG0180000698.01.T01:intron | 45.0% |
| !! | TACAAGAGCTGGAAGTGTTG+TGG | + | Chr1:9894959-9894978 | None:intergenic | 45.0% |
| !! | TGGAAGTGTTGTGGCTTCAA+AGG | + | Chr1:9894950-9894969 | None:intergenic | 45.0% |
| AAAGGGACTCCATTGAGACC+TGG | - | Chr1:9895445-9895464 | MsG0180000698.01.T01:intron | 50.0% | |
| ACCTGAGTTCGATTCCTGGT+TGG | - | Chr1:9893653-9893672 | MsG0180000698.01.T01:CDS | 50.0% | |
| AGGGAGGGCCCTTGTAATTT+GGG | + | Chr1:9893697-9893716 | None:intergenic | 50.0% | |
| CACTCAGCCCCCAAAAAGTT+AGG | + | Chr1:9894661-9894680 | None:intergenic | 50.0% | |
| CCGAGTCAAATGCAGAAGAG+AGG | + | Chr1:9894019-9894038 | None:intergenic | 50.0% | |
| CCTACAGACGGAGACAGAAA+CGG | - | Chr1:9895365-9895384 | MsG0180000698.01.T01:intron | 50.0% | |
| CCTGAGTTCGATTCCTGGTT+GGG | - | Chr1:9893654-9893673 | MsG0180000698.01.T01:CDS | 50.0% | |
| CTTGGCTATGGAACTTCGTG+TGG | - | Chr1:9895739-9895758 | MsG0180000698.01.T01:CDS | 50.0% | |
| GAGAACCTGAGTTCGATTCC+TGG | - | Chr1:9893649-9893668 | MsG0180000698.01.T01:CDS | 50.0% | |
| GGGTGGAATTGGAGTGAACT+GGG | - | Chr1:9893034-9893053 | MsG0180000698.01.T01:CDS | 50.0% | |
| GGTGGAATTGGAGTGAACTG+GGG | - | Chr1:9893035-9893054 | MsG0180000698.01.T01:CDS | 50.0% | |
| GTCTCAATGGAGTCCCTTTC+CGG | + | Chr1:9895444-9895463 | None:intergenic | 50.0% | |
| GTCTGTCCTAAAGTCGCCAT+CGG | + | Chr1:9895082-9895101 | None:intergenic | 50.0% | |
| TAGGGAGGGCCCTTGTAATT+TGG | + | Chr1:9893698-9893717 | None:intergenic | 50.0% | |
| TCATCAGGTAACCCTTCCGA+TGG | - | Chr1:9895063-9895082 | MsG0180000698.01.T01:intron | 50.0% | |
| TCCATAGGACCAGGTCTCAA+TGG | + | Chr1:9895457-9895476 | None:intergenic | 50.0% | |
| TCCATTGAGACCTGGTCCTA+TGG | - | Chr1:9895453-9895472 | MsG0180000698.01.T01:intron | 50.0% | |
| TCCTAAAGTCGCCATCGGAA+GGG | + | Chr1:9895077-9895096 | None:intergenic | 50.0% | |
| TGGGTGGAATTGGAGTGAAC+TGG | - | Chr1:9893033-9893052 | MsG0180000698.01.T01:CDS | 50.0% | |
| TGTCAAGAATCGTCCCAACC+AGG | + | Chr1:9893670-9893689 | None:intergenic | 50.0% | |
| TGTGGCGGTTTAGATATCCG+TGG | - | Chr1:9895757-9895776 | MsG0180000698.01.T01:intron | 50.0% | |
| ! | ATCACTGTTCAGGTTCGCTG+AGG | + | Chr1:9895668-9895687 | None:intergenic | 50.0% |
| ! | CTTGGGCAAATGTGCTACTC+CGG | + | Chr1:9895626-9895645 | None:intergenic | 50.0% |
| ! | TCACTGTTCAGGTTCGCTGA+GGG | + | Chr1:9895667-9895686 | None:intergenic | 50.0% |
| !! | ACTCTCTAGAGCTCAATCCC+TGG | + | Chr1:9893598-9893617 | None:intergenic | 50.0% |
| !! | CCCGTTGGTTCTTGATCCAA+TGG | + | Chr1:9895590-9895609 | None:intergenic | 50.0% |
| !! | CTCGCGCAACGTTTTAACCA+AGG | - | Chr1:9895398-9895417 | MsG0180000698.01.T01:intron | 50.0% |
| !! | GACTGCACTAGTCTTGGCTA+TGG | - | Chr1:9895727-9895746 | MsG0180000698.01.T01:CDS | 50.0% |
| !! | TCAAGAACCAACGGGCTAGT+AGG | - | Chr1:9895595-9895614 | MsG0180000698.01.T01:intron | 50.0% |
| ACCCTTCCGATGGCGACTTT+AGG | - | Chr1:9895073-9895092 | MsG0180000698.01.T01:intron | 55.0% | |
| CCCAACCAGGAATCGAACTC+AGG | + | Chr1:9893657-9893676 | None:intergenic | 55.0% | |
| CCGTTTCTGTCTCCGTCTGT+AGG | + | Chr1:9895368-9895387 | None:intergenic | 55.0% | |
| GAGGGCCCTTGTAATTTGGG+TGG | + | Chr1:9893694-9893713 | None:intergenic | 55.0% | |
| GGCTATGGAACTTCGTGTGG+CGG | - | Chr1:9895742-9895761 | MsG0180000698.01.T01:CDS | 55.0% | |
| GTCCTAAAGTCGCCATCGGA+AGG | + | Chr1:9895078-9895097 | None:intergenic | 55.0% | |
| !! | AACGGGCTAGTAGGTGCTAC+CGG | - | Chr1:9895604-9895623 | MsG0180000698.01.T01:intron | 55.0% |
| !! | CTTTTTGGGGGCTGAGTGCA+TGG | - | Chr1:9894663-9894682 | MsG0180000698.01.T01:intron | 55.0% |
| !! | GAGATCGGTTGGCCTACAGA+CGG | - | Chr1:9895353-9895372 | MsG0180000698.01.T01:intron | 55.0% |
| GGTAGCACCTACTAGCCCGT+TGG | + | Chr1:9895605-9895624 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 9893025 | 9895909 | 9893025 | ID=MsG0180000698.01;Name=MsG0180000698.01 |
| Chr1 | mRNA | 9893025 | 9895909 | 9893025 | ID=MsG0180000698.01.T01;Parent=MsG0180000698.01;Name=MsG0180000698.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|0.75|0.6|5|0|346 |
| Chr1 | exon | 9895819 | 9895909 | 9895819 | ID=MsG0180000698.01.T01:exon:5043;Parent=MsG0180000698.01.T01 |
| Chr1 | exon | 9895682 | 9895763 | 9895682 | ID=MsG0180000698.01.T01:exon:5044;Parent=MsG0180000698.01.T01 |
| Chr1 | exon | 9893865 | 9894034 | 9893865 | ID=MsG0180000698.01.T01:exon:5045;Parent=MsG0180000698.01.T01 |
| Chr1 | exon | 9893575 | 9893811 | 9893575 | ID=MsG0180000698.01.T01:exon:5046;Parent=MsG0180000698.01.T01 |
| Chr1 | exon | 9893025 | 9893485 | 9893025 | ID=MsG0180000698.01.T01:exon:5047;Parent=MsG0180000698.01.T01 |
| Chr1 | CDS | 9895819 | 9895909 | 9895819 | ID=MsG0180000698.01.T01:cds;Parent=MsG0180000698.01.T01 |
| Chr1 | CDS | 9895682 | 9895763 | 9895682 | ID=MsG0180000698.01.T01:cds;Parent=MsG0180000698.01.T01 |
| Chr1 | CDS | 9893865 | 9894034 | 9893865 | ID=MsG0180000698.01.T01:cds;Parent=MsG0180000698.01.T01 |
| Chr1 | CDS | 9893575 | 9893811 | 9893575 | ID=MsG0180000698.01.T01:cds;Parent=MsG0180000698.01.T01 |
| Chr1 | CDS | 9893025 | 9893485 | 9893025 | ID=MsG0180000698.01.T01:cds;Parent=MsG0180000698.01.T01 |
| Gene Sequence |
| Protein sequence |
