AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033645.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033645.01.T01 MTR_0019s0120 61.765 272 17 5 1 185 132 403 5.65e-102 306
MsG0680033645.01.T01 MTR_0019s0120 100.000 51 0 0 186 236 484 534 5.51e-27 108
MsG0680033645.01.T01 MTR_0019s0120 61.765 272 17 5 1 185 132 403 3.85e-101 307
MsG0680033645.01.T01 MTR_0019s0120 100.000 60 0 0 186 245 484 543 9.85e-34 128
MsG0680033645.01.T01 MTR_1g101370 49.819 277 47 7 1 185 119 395 8.61e-74 236
MsG0680033645.01.T01 MTR_1g101370 49.618 131 55 3 126 245 404 534 1.00e-28 114
MsG0680033645.01.T01 MTR_7g076170 48.913 276 49 7 1 185 128 402 3.28e-71 229
MsG0680033645.01.T01 MTR_7g076170 42.222 135 66 2 127 249 412 546 1.02e-26 108
MsG0680033645.01.T01 MTR_8g432680 63.043 184 37 3 1 153 132 315 4.80e-71 229
MsG0680033645.01.T01 MTR_8g432680 71.875 64 18 0 186 249 488 551 1.98e-26 107
MsG0680033645.01.T01 MTR_8g100075 61.628 172 39 2 1 145 125 296 3.23e-65 214
MsG0680033645.01.T01 MTR_8g100075 48.760 121 49 5 128 245 427 537 2.54e-25 104
MsG0680033645.01.T01 MTR_4g098890 58.152 184 46 3 1 153 113 296 4.51e-64 216
MsG0680033645.01.T01 MTR_4g098890 66.667 60 19 1 186 245 462 520 8.67e-19 85.9
MsG0680033645.01.T01 MTR_5g040360 58.721 172 44 2 1 145 111 282 3.00e-63 208
MsG0680033645.01.T01 MTR_5g040360 66.667 60 20 0 186 245 457 516 4.70e-20 89.4
MsG0680033645.01.T01 MTR_8g055840 58.721 172 44 2 1 145 111 282 3.12e-63 208
MsG0680033645.01.T01 MTR_8g055840 65.000 60 21 0 186 245 458 517 2.79e-19 87.0
MsG0680033645.01.T01 MTR_3g040370 53.804 184 54 3 1 153 112 295 1.80e-58 195
MsG0680033645.01.T01 MTR_3g040370 63.333 60 22 0 186 245 455 514 8.76e-19 85.5
MsG0680033645.01.T01 MTR_8g071280 53.977 176 53 3 1 148 97 272 4.38e-54 184
MsG0680033645.01.T01 MTR_8g071280 60.938 64 24 1 182 245 444 506 3.95e-18 83.6
MsG0680033645.01.T01 MTR_7g006060 51.462 171 54 3 4 145 73 243 5.81e-53 180
MsG0680033645.01.T01 MTR_7g006060 71.667 60 17 0 186 245 426 485 1.02e-22 97.1
MsG0680033645.01.T01 MTR_5g026930 54.651 172 50 3 5 148 103 274 1.24e-48 167
MsG0680033645.01.T01 MTR_5g026930 54.651 172 50 3 5 148 103 274 4.50e-48 167
MsG0680033645.01.T01 MTR_5g026930 56.250 64 27 1 182 245 446 508 2.61e-16 78.2
MsG0680033645.01.T01 MTR_7g076150 46.821 173 65 2 3 148 104 276 4.88e-48 167
MsG0680033645.01.T01 MTR_7g076150 66.667 60 19 1 186 245 440 498 1.92e-18 84.7
MsG0680033645.01.T01 MTR_5g080720 47.647 170 60 4 5 145 158 327 1.65e-46 163
MsG0680033645.01.T01 MTR_5g080720 54.839 62 25 2 186 245 497 557 2.91e-14 72.4
MsG0680033645.01.T01 MTR_5g080720 47.647 170 60 4 5 145 158 327 3.21e-46 163
MsG0680033645.01.T01 MTR_5g080720 54.839 62 25 2 186 245 497 557 3.09e-14 72.4
MsG0680033645.01.T01 MTR_8g432620 46.243 173 66 2 3 148 117 289 5.23e-46 162
MsG0680033645.01.T01 MTR_8g432620 63.333 60 21 1 186 245 453 511 1.13e-18 85.1
MsG0680033645.01.T01 MTR_3g068990 48.235 170 59 4 5 145 186 355 1.53e-45 161
MsG0680033645.01.T01 MTR_3g068990 51.515 66 29 2 186 249 525 589 5.66e-14 71.6
MsG0680033645.01.T01 MTR_1g029730 47.059 170 61 2 5 145 175 344 2.01e-43 155
MsG0680033645.01.T01 MTR_1g029730 53.226 62 26 2 186 245 514 574 6.71e-13 68.2
MsG0680033645.01.T01 MTR_1g442840 44.382 178 66 3 1 145 10 187 3.50e-42 150
MsG0680033645.01.T01 MTR_1g442840 56.667 60 25 1 186 245 357 415 5.22e-14 71.6
MsG0680033645.01.T01 MTR_1g442840 44.382 178 66 3 1 145 123 300 1.02e-41 150
MsG0680033645.01.T01 MTR_1g442840 56.667 60 25 1 186 245 470 528 4.76e-14 71.6
MsG0680033645.01.T01 MTR_3g088790 46.821 173 59 5 3 145 255 424 1.29e-41 151
MsG0680033645.01.T01 MTR_3g088790 59.677 62 22 2 186 245 603 663 1.16e-16 79.3
MsG0680033645.01.T01 MTR_1g069785 44.382 178 66 3 1 145 93 270 1.23e-40 147
MsG0680033645.01.T01 MTR_1g069785 58.462 65 26 1 181 245 435 498 1.25e-16 79.3
MsG0680033645.01.T01 MTR_5g021100 45.402 174 64 3 3 147 351 522 4.65e-40 147
MsG0680033645.01.T01 MTR_5g021100 63.333 60 21 1 186 245 698 756 1.19e-17 82.4
MsG0680033645.01.T01 MTR_1g075900 44.382 178 66 3 1 145 122 299 5.14e-40 146
MsG0680033645.01.T01 MTR_1g075900 56.250 64 27 1 182 245 465 527 2.15e-15 75.9
MsG0680033645.01.T01 MTR_7g076150 54.310 116 51 1 35 148 18 133 4.41e-39 141
MsG0680033645.01.T01 MTR_7g076150 66.667 60 19 1 186 245 297 355 1.84e-18 84.3
MsG0680033645.01.T01 MTR_1g051055 45.143 175 64 2 5 147 121 295 7.80e-39 142
MsG0680033645.01.T01 MTR_1g051055 41.346 104 48 3 154 245 415 517 5.83e-19 86.3
MsG0680033645.01.T01 MTR_3g096480 45.349 172 63 3 3 145 290 459 8.06e-39 143
MsG0680033645.01.T01 MTR_3g096480 63.333 60 21 1 186 245 639 697 3.93e-18 84.0
MsG0680033645.01.T01 MTR_8g093880 44.767 172 64 4 3 145 320 489 1.41e-38 143
MsG0680033645.01.T01 MTR_8g093880 61.667 60 22 1 186 245 669 727 2.28e-18 84.7
MsG0680033645.01.T01 MTR_8g076650 45.402 174 64 4 3 147 408 579 4.09e-38 141
MsG0680033645.01.T01 MTR_8g076650 63.333 60 21 1 186 245 753 811 5.09e-18 83.6
MsG0680033645.01.T01 MTR_5g083150 41.379 174 71 3 1 145 121 292 1.12e-37 139
MsG0680033645.01.T01 MTR_5g083150 66.667 60 19 1 186 245 465 523 3.66e-19 86.7
MsG0680033645.01.T01 MTR_3g071530 40.120 167 69 3 8 145 180 344 5.70e-33 126
MsG0680033645.01.T01 MTR_3g071530 65.000 60 20 1 186 245 513 571 2.51e-20 90.1
MsG0680033645.01.T01 MTR_4g083030 32.402 179 85 4 5 147 117 295 1.06e-21 94.0
MsG0680033645.01.T01 MTR_1g022255 31.214 173 87 4 3 145 227 397 6.34e-21 92.0
MsG0680033645.01.T01 MTR_1g022255 56.667 60 25 1 186 245 561 619 1.47e-16 79.3
MsG0680033645.01.T01 MTR_1g022255 31.214 173 87 4 3 145 227 397 7.26e-21 91.7
MsG0680033645.01.T01 MTR_5g064080 32.961 179 82 5 5 147 169 345 3.23e-20 89.7
MsG0680033645.01.T01 MTR_5g064080 50.000 62 28 2 186 245 526 586 6.46e-12 65.5
MsG0680033645.01.T01 MTR_3g074780 30.726 179 86 5 5 147 185 361 9.31e-19 85.5
MsG0680033645.01.T01 MTR_3g074780 51.613 62 27 2 186 245 544 604 6.51e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033645.01.T01 AT4G00750 64.571 175 35 2 1 148 123 297 5.71e-71 229
MsG0680033645.01.T01 AT4G00750 71.875 64 18 0 186 249 480 543 1.42e-25 105
MsG0680033645.01.T01 AT2G45750 39.714 350 101 9 3 246 116 461 5.08e-69 224
MsG0680033645.01.T01 AT2G45750 73.438 64 17 0 186 249 473 536 2.02e-26 107
MsG0680033645.01.T01 AT4G10440 61.628 172 39 2 1 145 120 291 5.61e-64 211
MsG0680033645.01.T01 AT4G10440 71.667 60 17 0 186 245 474 533 4.32e-24 101
MsG0680033645.01.T01 AT1G33170 58.696 184 45 3 1 153 137 320 1.03e-63 210
MsG0680033645.01.T01 AT1G33170 68.333 60 19 0 186 245 492 551 3.83e-23 98.6
MsG0680033645.01.T01 AT4G18030 58.721 172 44 2 1 145 112 283 7.37e-62 205
MsG0680033645.01.T01 AT4G18030 59.375 64 25 1 186 249 462 524 1.00e-17 82.4
MsG0680033645.01.T01 AT1G26850 56.977 172 47 2 1 145 113 284 2.03e-61 201
MsG0680033645.01.T01 AT1G26850 56.977 172 47 2 1 145 113 284 1.49e-60 201
MsG0680033645.01.T01 AT1G26850 65.000 60 21 0 186 245 466 525 2.50e-20 90.1
MsG0680033645.01.T01 AT1G26850 56.977 172 47 2 1 145 113 284 1.49e-60 201
MsG0680033645.01.T01 AT1G26850 65.000 60 21 0 186 245 466 525 2.50e-20 90.1
MsG0680033645.01.T01 AT4G19120 51.136 176 58 3 1 148 97 272 1.45e-53 180
MsG0680033645.01.T01 AT4G19120 54.545 55 24 1 182 236 446 499 3.12e-11 63.2
MsG0680033645.01.T01 AT4G19120 51.136 176 58 3 1 148 97 272 4.18e-53 181
MsG0680033645.01.T01 AT4G19120 59.375 64 25 1 182 245 446 508 3.51e-17 80.9
MsG0680033645.01.T01 AT4G19120 51.136 176 58 3 1 148 97 272 4.18e-53 181
MsG0680033645.01.T01 AT4G19120 59.375 64 25 1 182 245 446 508 3.51e-17 80.9
MsG0680033645.01.T01 AT1G31850 51.136 176 58 3 1 148 103 278 1.03e-52 180
MsG0680033645.01.T01 AT1G31850 56.250 64 27 1 182 245 452 514 3.32e-17 80.9
MsG0680033645.01.T01 AT1G31850 51.136 176 58 3 1 148 103 278 1.03e-52 180
MsG0680033645.01.T01 AT1G31850 56.250 64 27 1 182 245 452 514 3.32e-17 80.9
MsG0680033645.01.T01 AT1G31850 51.136 176 58 3 1 148 103 278 1.03e-52 180
MsG0680033645.01.T01 AT1G31850 56.250 64 27 1 182 245 452 514 3.32e-17 80.9
MsG0680033645.01.T01 AT1G31850 51.136 176 58 3 1 148 103 278 1.03e-52 180
MsG0680033645.01.T01 AT1G31850 56.250 64 27 1 182 245 452 514 3.32e-17 80.9
MsG0680033645.01.T01 AT2G43200 51.445 173 56 3 4 148 121 293 8.49e-51 175
MsG0680033645.01.T01 AT2G43200 53.684 95 36 2 151 245 442 528 2.99e-24 101
MsG0680033645.01.T01 AT2G43200 51.445 173 56 3 4 148 121 293 8.49e-51 175
MsG0680033645.01.T01 AT2G43200 53.684 95 36 2 151 245 442 528 2.99e-24 101
MsG0680033645.01.T01 AT4G00740 47.126 174 65 2 2 148 109 282 1.89e-47 166
MsG0680033645.01.T01 AT4G00740 57.812 64 26 1 186 249 446 508 6.26e-19 86.3
MsG0680033645.01.T01 AT4G00740 47.126 174 65 2 2 148 109 282 1.89e-47 166
MsG0680033645.01.T01 AT4G00740 57.812 64 26 1 186 249 446 508 6.26e-19 86.3
MsG0680033645.01.T01 AT2G39750 48.235 170 59 4 5 145 210 379 6.82e-46 163
MsG0680033645.01.T01 AT2G39750 47.826 69 33 2 183 249 546 613 9.81e-13 67.8
MsG0680033645.01.T01 AT5G06050 47.059 170 61 2 5 145 182 351 8.83e-45 159
MsG0680033645.01.T01 AT5G06050 51.613 62 27 2 186 245 521 581 3.12e-13 69.3
MsG0680033645.01.T01 AT1G04430 44.944 178 65 3 1 145 115 292 8.79e-44 156
MsG0680033645.01.T01 AT1G04430 58.333 60 24 1 186 245 462 520 3.40e-15 75.1
MsG0680033645.01.T01 AT1G04430 44.944 178 65 3 1 145 115 292 8.79e-44 156
MsG0680033645.01.T01 AT1G04430 58.333 60 24 1 186 245 462 520 3.40e-15 75.1
MsG0680033645.01.T01 AT1G04430 44.944 178 65 3 1 145 115 292 8.79e-44 156
MsG0680033645.01.T01 AT1G04430 58.333 60 24 1 186 245 462 520 3.40e-15 75.1
MsG0680033645.01.T01 AT4G14360 45.506 178 64 3 1 145 107 284 6.14e-43 154
MsG0680033645.01.T01 AT4G14360 54.688 64 28 1 182 245 450 512 4.90e-15 74.7
MsG0680033645.01.T01 AT4G14360 45.506 178 64 3 1 145 107 284 6.14e-43 154
MsG0680033645.01.T01 AT4G14360 54.688 64 28 1 182 245 450 512 4.90e-15 74.7
MsG0680033645.01.T01 AT1G77260 46.471 170 60 3 5 145 176 343 2.77e-42 152
MsG0680033645.01.T01 AT1G77260 52.308 65 28 2 183 245 510 573 1.48e-12 67.4
MsG0680033645.01.T01 AT5G14430 43.820 178 67 3 1 145 111 288 1.06e-41 150
MsG0680033645.01.T01 AT5G14430 55.000 60 26 1 186 245 458 516 6.89e-15 74.3
MsG0680033645.01.T01 AT3G51070 46.821 173 59 5 3 145 403 572 1.12e-41 152
MsG0680033645.01.T01 AT3G51070 61.667 60 22 1 186 245 752 810 1.40e-17 82.4
MsG0680033645.01.T01 AT3G23300 43.820 178 67 3 1 145 110 287 6.68e-41 148
MsG0680033645.01.T01 AT3G23300 54.688 64 28 1 182 245 453 515 4.73e-15 74.7
MsG0680033645.01.T01 AT3G23300 43.820 178 67 3 1 145 110 287 6.68e-41 148
MsG0680033645.01.T01 AT3G23300 54.688 64 28 1 182 245 453 515 4.73e-15 74.7
MsG0680033645.01.T01 AT3G51070 45.349 172 63 3 3 145 403 572 3.78e-40 147
MsG0680033645.01.T01 AT3G51070 61.667 60 22 1 186 245 752 810 3.23e-17 81.3
MsG0680033645.01.T01 AT5G64030 44.767 172 64 4 3 145 330 499 4.88e-40 147
MsG0680033645.01.T01 AT5G64030 63.333 60 21 1 186 245 679 737 1.75e-18 85.1
MsG0680033645.01.T01 AT3G56080 42.373 177 71 3 1 148 134 308 5.67e-40 145
MsG0680033645.01.T01 AT3G56080 60.000 60 23 1 186 245 475 533 9.81e-20 88.6
MsG0680033645.01.T01 AT3G56080 42.373 177 71 3 1 148 134 308 9.16e-40 145
MsG0680033645.01.T01 AT3G56080 60.000 60 23 1 186 245 475 533 1.20e-19 88.2
MsG0680033645.01.T01 AT2G34300 45.349 172 63 3 3 145 272 441 1.08e-39 146
MsG0680033645.01.T01 AT2G34300 61.667 60 22 1 186 245 620 678 9.74e-18 82.8
MsG0680033645.01.T01 AT2G34300 45.349 172 63 3 3 145 272 441 1.08e-39 146
MsG0680033645.01.T01 AT2G34300 61.667 60 22 1 186 245 620 678 9.74e-18 82.8
MsG0680033645.01.T01 AT2G34300 45.349 172 63 3 3 145 272 441 1.08e-39 146
MsG0680033645.01.T01 AT2G34300 61.667 60 22 1 186 245 620 678 9.74e-18 82.8
MsG0680033645.01.T01 AT5G14430 42.135 178 70 3 1 145 111 288 1.59e-39 144
MsG0680033645.01.T01 AT5G14430 55.000 60 26 1 186 245 458 516 6.64e-15 74.3
MsG0680033645.01.T01 AT1G29470 44.767 172 64 3 3 145 272 441 1.04e-38 143
MsG0680033645.01.T01 AT1G29470 63.333 60 21 1 186 245 620 678 5.12e-18 83.6
MsG0680033645.01.T01 AT1G29470 44.767 172 64 3 3 145 272 441 1.04e-38 143
MsG0680033645.01.T01 AT1G29470 63.333 60 21 1 186 245 620 678 5.12e-18 83.6
MsG0680033645.01.T01 AT3G10200 43.353 173 66 3 5 145 107 279 3.88e-38 140
MsG0680033645.01.T01 AT3G10200 46.809 94 38 3 153 245 418 500 8.56e-20 88.6
MsG0680033645.01.T01 AT3G10200 43.353 173 66 3 5 145 107 279 3.97e-38 140
MsG0680033645.01.T01 AT3G10200 46.809 94 38 3 153 245 418 500 1.05e-19 88.2
MsG0680033645.01.T01 AT2G40280 41.379 174 71 3 1 145 110 281 1.35e-36 136
MsG0680033645.01.T01 AT2G40280 63.333 60 21 1 186 245 448 506 2.49e-20 90.1
MsG0680033645.01.T01 AT5G04060 42.286 175 69 2 5 147 118 292 1.42e-36 136
MsG0680033645.01.T01 AT5G04060 48.864 88 35 2 167 245 425 511 3.61e-19 86.7
MsG0680033645.01.T01 AT1G13860 32.768 177 83 4 5 145 101 277 2.75e-21 92.8
MsG0680033645.01.T01 AT1G13860 32.768 177 83 4 5 145 101 277 2.75e-21 92.8
MsG0680033645.01.T01 AT1G13860 32.768 177 83 4 5 145 101 277 2.75e-21 92.8
MsG0680033645.01.T01 AT1G13860 32.768 177 83 4 5 145 101 277 2.75e-21 92.8
MsG0680033645.01.T01 AT2G03480 32.203 177 84 4 5 145 117 293 6.92e-21 91.3
MsG0680033645.01.T01 AT2G03480 32.203 177 84 4 5 145 117 293 1.71e-20 90.5
MsG0680033645.01.T01 AT2G03480 32.203 177 84 4 5 145 117 293 1.78e-20 90.5
MsG0680033645.01.T01 AT1G19430 31.111 180 92 4 3 152 250 427 1.15e-19 88.2
MsG0680033645.01.T01 AT1G19430 63.333 60 21 1 186 245 584 642 2.57e-18 84.3
MsG0680033645.01.T01 AT1G19430 31.111 180 92 4 3 152 250 427 1.15e-19 88.2
MsG0680033645.01.T01 AT1G19430 63.333 60 21 1 186 245 584 642 2.57e-18 84.3
MsG0680033645.01.T01 AT1G19430 31.111 180 92 4 3 152 250 427 1.41e-19 88.2
MsG0680033645.01.T01 AT1G78240 40.336 119 61 3 36 147 237 352 2.11e-18 84.7
MsG0680033645.01.T01 AT1G78240 50.000 62 28 2 186 245 534 594 2.77e-11 63.5
MsG0680033645.01.T01 AT1G78240 40.336 119 61 3 36 147 237 352 2.11e-18 84.7
MsG0680033645.01.T01 AT1G78240 50.000 62 28 2 186 245 534 594 2.77e-11 63.5
MsG0680033645.01.T01 AT1G13860 40.196 102 46 1 44 145 35 121 1.90e-17 81.6

Find 95 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAGACATGAATGCTTATT+TGG 0.073772 6:-70181033 MsG0680033645.01.T01:CDS
ATTTGCAATCCAAATGATTT+TGG 0.097900 6:+70182320 None:intergenic
CACTTGTTAAATATCCTATT+TGG 0.102129 6:-70180995 MsG0680033645.01.T01:CDS
AGAAAGTTGATATTGCTATT+TGG 0.243711 6:-70182351 MsG0680033645.01.T01:CDS
AGAGGTGTTCCTGCAATTAT+TGG 0.248757 6:-70183126 MsG0680033645.01.T01:CDS
TGATTGGAATGTATCATAAT+TGG 0.257260 6:-70180908 MsG0680033645.01.T01:intron
GTTAATACATTGTCTATTAG+AGG 0.257692 6:-70180026 MsG0680033645.01.T01:three_prime_UTR
TTTAAGATTTCATGTTTCTT+AGG 0.258970 6:+70187592 None:intergenic
ATTGCAAATTCACTCAAAAT+AGG 0.261527 6:-70182306 MsG0680033645.01.T01:CDS
TATTTGCTGTGAAGAAATAT+TGG 0.269015 6:-70180248 MsG0680033645.01.T01:three_prime_UTR
CTTTCAAGAGCCCATCTTCA+TGG 0.281561 6:+70180279 None:intergenic
CATATTCAGGCCATGGAATA+AGG 0.284184 6:+70183037 None:intergenic
GAAAGTTGATATTGCTATTT+GGG 0.293019 6:-70182350 MsG0680033645.01.T01:CDS
CTCAAATGACAATACTATTT+AGG 0.311881 6:-70180214 MsG0680033645.01.T01:three_prime_UTR
GGCAGAAACCCAAAATCATT+TGG 0.319060 6:-70182329 MsG0680033645.01.T01:CDS
CTTATTCCATGGCCTGAATA+TGG 0.319290 6:-70183036 MsG0680033645.01.T01:intron
GATAAGTATATTGATGATAT+TGG 0.322381 6:-70187381 MsG0680033645.01.T01:CDS
AGACAATGTATTAACTAATA+AGG 0.322573 6:+70180034 None:intergenic
TTATTCTGCTCTTGGCAAAA+AGG 0.325310 6:+70182283 None:intergenic
AATAAGCATTCATGTCTAAT+AGG 0.333573 6:+70181036 None:intergenic
GAGGTGTTCCTGCAATTATT+GGG 0.334013 6:-70183125 MsG0680033645.01.T01:CDS
CTAATTATTACACTTCCTTC+TGG 0.339638 6:+70180373 None:intergenic
ACTTGTTAAATATCCTATTT+GGG 0.348847 6:-70180994 MsG0680033645.01.T01:CDS
TGTCAGGGTTATTCTGCTCT+TGG 0.371069 6:+70182275 None:intergenic
AGCACATACCAGGCTTTGTC+AGG 0.372595 6:+70182259 None:intergenic
TTAGACATGAATGCTTATTT+GGG 0.377741 6:-70181032 MsG0680033645.01.T01:CDS
ACCACATTCATAACCCAAAT+AGG 0.383835 6:+70180981 None:intergenic
TTCGGATGTGTATGGTGATC+TGG 0.396642 6:-70180080 MsG0680033645.01.T01:three_prime_UTR
ATGTGTGCAGGTTGCTAGTT+GGG 0.397711 6:-70183235 MsG0680033645.01.T01:intron
TGTAAGCAAACTTTGTTGAA+TGG 0.398403 6:-70179935 MsG0680033645.01.T01:three_prime_UTR
GCCATGTCAAAGGCTCTAGA+AGG 0.400141 6:+70183075 None:intergenic
AAAGTATACCTGTCATATAA+AGG 0.408468 6:+70180743 None:intergenic
ATAAGTATATTGATGATATT+GGG 0.413613 6:-70187380 MsG0680033645.01.T01:CDS
GTATCAACTTTAGCTTGAAT+AGG 0.420482 6:+70180957 None:intergenic
TTCTTGTAACCGTTTGGTGC+TGG 0.420744 6:+70187559 None:intergenic
TTCGAACGACATAAGTTGTT+CGG 0.421737 6:-70180136 MsG0680033645.01.T01:three_prime_UTR
TGTGAGAACTGCTGTGATAC+TGG 0.424361 6:-70187331 MsG0680033645.01.T01:CDS
AAAGGATTCTTGTAACCGTT+TGG 0.425376 6:+70187553 None:intergenic
GTTCAATTTGCTCTTGAAAG+AGG 0.426870 6:-70183144 MsG0680033645.01.T01:CDS
TCTGCTTTGTAGATGTGAAT+TGG 0.430180 6:-70180429 MsG0680033645.01.T01:intron
ATATATGAAAGAGGGTTGAT+TGG 0.453552 6:-70180924 MsG0680033645.01.T01:CDS
GTTCTCGCTGCCTTATTCCA+TGG 0.455747 6:-70183047 MsG0680033645.01.T01:CDS
AACAGTTTCAATTGCACCAA+GGG 0.459276 6:-70183184 MsG0680033645.01.T01:CDS
ATGTCTCTACTTGTGGGCCA+TGG 0.459713 6:+70187529 None:intergenic
GCAAAGACCCCAATAATTGC+AGG 0.463464 6:+70183117 None:intergenic
GTGTTTAGCCTTTATATGAC+AGG 0.466218 6:-70180751 MsG0680033645.01.T01:intron
CAAATTGTGGACCATGAAGA+TGG 0.472130 6:-70180290 MsG0680033645.01.T01:three_prime_UTR
GGTGGTACTATGTTTCCTAA+TGG 0.474022 6:-70187408 MsG0680033645.01.T01:CDS
AAAGAGCATAATCAATGGCT+TGG 0.481691 6:-70180324 MsG0680033645.01.T01:three_prime_UTR
AATACAAAAGTGAGGAAGGA+AGG 0.482029 6:+70179979 None:intergenic
ATATACTTATCAGCACCATT+AGG 0.486668 6:+70187393 None:intergenic
AGAATAACCCTGACAAAGCC+TGG 0.490151 6:-70182267 MsG0680033645.01.T01:intron
CTACTTGTGGGCCATGGGAA+AGG 0.490397 6:+70187535 None:intergenic
CAAGCTAAAGTTGATACACT+TGG 0.491094 6:-70180951 MsG0680033645.01.T01:CDS
TAGTACCACCACCAGGAAAA+CGG 0.493127 6:+70187421 None:intergenic
AAGTTGATTAATCTTGAAGA+TGG 0.495272 6:-70187357 MsG0680033645.01.T01:CDS
AGACATATTGCTAGAGATGT+AGG 0.498331 6:-70180405 MsG0680033645.01.T01:three_prime_UTR
AACACAGAATCAGCATGAAT+AGG 0.499179 6:+70180769 None:intergenic
CCAAGCCATGTCTCTACTTG+TGG 0.501584 6:+70187522 None:intergenic
TCCTATTTGGGTTATGAATG+TGG 0.505514 6:-70180982 MsG0680033645.01.T01:CDS
CATGAATAGGTCATAAGTCT+AGG 0.511337 6:+70180782 None:intergenic
CTAAATAGTATTGTCATTTG+AGG 0.516055 6:+70180215 None:intergenic
TGTCTCTACTTGTGGGCCAT+GGG 0.516352 6:+70187530 None:intergenic
CAAGCCATGTCTCTACTTGT+GGG 0.523142 6:+70187523 None:intergenic
CCCTTCTAGAGCCTTTGACA+TGG 0.525416 6:-70183076 MsG0680033645.01.T01:CDS
TCTTAGGACAGTGTCGTTCG+CGG 0.526064 6:+70187608 None:intergenic
GACATGAATGCTTATTTGGG+TGG 0.530858 6:-70181029 MsG0680033645.01.T01:CDS
ATAGTATTGTCATTTGAGGC+AGG 0.531671 6:+70180219 None:intergenic
TATGTCACGTGATAGTAGAT+AGG 0.536542 6:+70183209 None:intergenic
GCATAATCAATGGCTTGGAA+TGG 0.537019 6:-70180319 MsG0680033645.01.T01:three_prime_UTR
ACTATACCATATTCAGGCCA+TGG 0.539734 6:+70183030 None:intergenic
ATAAAATACAAAAGTGAGGA+AGG 0.542942 6:+70179975 None:intergenic
TGTAGGATTCTTAGACCAGA+AGG 0.543612 6:-70180388 MsG0680033645.01.T01:three_prime_UTR
AATGTGTGCAGGTTGCTAGT+TGG 0.544418 6:-70183236 MsG0680033645.01.T01:intron
TGTGCTTCATGAGTATCCCT+TGG 0.555852 6:+70183168 None:intergenic
AAAGTAAAGAGCATAATCAA+TGG 0.558091 6:-70180329 MsG0680033645.01.T01:three_prime_UTR
CTTGGAGCAATATATGAAAG+AGG 0.559920 6:-70180933 MsG0680033645.01.T01:CDS
CCACAAGTAGAGACATGGCT+TGG 0.575701 6:-70187522 MsG0680033645.01.T01:intron
AGAACAATGTGCCATGTCAA+AGG 0.578937 6:+70183065 None:intergenic
GTATGGTGATCTGGTGTTGA+AGG 0.593912 6:-70180071 MsG0680033645.01.T01:three_prime_UTR
TGTCGTGTTCCAGCACCAAA+CGG 0.596625 6:-70187568 MsG0680033645.01.T01:CDS
GGAATGGAAGAGTCAAATTG+TGG 0.598742 6:-70180303 MsG0680033645.01.T01:three_prime_UTR
ATTGTCATTTGAGGCAGGAG+AGG 0.601191 6:+70180224 None:intergenic
AACAATAAAATACAAAAGTG+AGG 0.601265 6:+70179971 None:intergenic
AAATTGTGGACCATGAAGAT+GGG 0.601433 6:-70180289 MsG0680033645.01.T01:three_prime_UTR
TGTGTGCAGGTTGCTAGTTG+GGG 0.607424 6:-70183234 MsG0680033645.01.T01:intron
TCAAAGGCTCTAGAAGGGAA+AGG 0.608892 6:+70183081 None:intergenic
GTTACAAGAATCCTTTCCCA+TGG 0.609267 6:-70187546 MsG0680033645.01.T01:CDS
CCATGTCAAAGGCTCTAGAA+GGG 0.611499 6:+70183076 None:intergenic
AGGTGTTCCTGCAATTATTG+GGG 0.614069 6:-70183124 MsG0680033645.01.T01:CDS
GCACATACCAGGCTTTGTCA+GGG 0.626019 6:+70182260 None:intergenic
TTGGAGCAATATATGAAAGA+GGG 0.636053 6:-70180932 MsG0680033645.01.T01:CDS
TAACAGTTTCAATTGCACCA+AGG 0.657798 6:-70183185 MsG0680033645.01.T01:CDS
GGAAACATAGTACCACCACC+AGG 0.673211 6:+70187414 None:intergenic
ATGGCCCACAAGTAGAGACA+TGG 0.675055 6:-70187527 MsG0680033645.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAAATATAATTTTTTTA+CGG + Chr6:70183886-70183905 None:intergenic 0.0%
!! AGATATTAAAAAGAATTTAA+TGG + Chr6:70181021-70181040 None:intergenic 10.0%
!! ATAAAAAATTTGTGAAAAAA+AGG + Chr6:70182455-70182474 None:intergenic 10.0%
!! ATATAAAAGATAAAAGTAAT+TGG + Chr6:70185848-70185867 None:intergenic 10.0%
!! ATTCAAAAAAAAATTGATAT+CGG + Chr6:70180362-70180381 None:intergenic 10.0%
!! GTTATTATTTGATATATATA+TGG + Chr6:70183821-70183840 None:intergenic 10.0%
!!! AAATAGATTTTTTTTTTTGA+AGG + Chr6:70186063-70186082 None:intergenic 10.0%
!!! AAGAAAAAAACATTTTATTT+AGG - Chr6:70180716-70180735 MsG0680033645.01.T01:intron 10.0%
!!! AATTGAAAGTTTTTTTTTTA+GGG + Chr6:70181992-70182011 None:intergenic 10.0%
!!! GATAATTAGTTTTATATTTA+AGG + Chr6:70184127-70184146 None:intergenic 10.0%
!!! TAATTGAAAGTTTTTTTTTT+AGG + Chr6:70181993-70182012 None:intergenic 10.0%
!!! TATTTAATTTGATGATTATT+TGG + Chr6:70182974-70182993 None:intergenic 10.0%
!!! TCTTATTGATTTTTTTTTTT+AGG - Chr6:70183167-70183186 MsG0680033645.01.T01:CDS 10.0%
!!! TGATGATTTTTTTTTTTAAA+GGG - Chr6:70186680-70186699 MsG0680033645.01.T01:intron 10.0%
!!! TTGATGATTTTTTTTTTTAA+AGG - Chr6:70186679-70186698 MsG0680033645.01.T01:intron 10.0%
!! AATAAATAACAACCTATAAA+TGG - Chr6:70183733-70183752 MsG0680033645.01.T01:intron 15.0%
!! AATAAGAACAAAAAAAAACA+AGG + Chr6:70183154-70183173 None:intergenic 15.0%
!! AATGAATTCTATATATTACA+TGG + Chr6:70186019-70186038 None:intergenic 15.0%
!! ACAAAAAATATGCAATAATT+TGG + Chr6:70185409-70185428 None:intergenic 15.0%
!! ATCAAGAAGATTAAATAATA+TGG + Chr6:70183924-70183943 None:intergenic 15.0%
!! ATGTTTGTACTTATTATTAT+TGG - Chr6:70186223-70186242 MsG0680033645.01.T01:intron 15.0%
!! ATTATAGAACCTAAATAATA+AGG - Chr6:70182614-70182633 MsG0680033645.01.T01:intron 15.0%
!! ATTATAGAACCTTATTATTT+AGG + Chr6:70182626-70182645 None:intergenic 15.0%
!! CTATTAAAATAAAAAAGACA+TGG + Chr6:70180954-70180973 None:intergenic 15.0%
!! TAAGTTAGTTAATCAATTAA+CGG - Chr6:70181727-70181746 MsG0680033645.01.T01:intron 15.0%
!! TCAAGAAGATTAAATAATAT+GGG + Chr6:70183923-70183942 None:intergenic 15.0%
!! TGAGAAAAATATAAAGAAAA+AGG + Chr6:70183463-70183482 None:intergenic 15.0%
!!! AAATTTTTTATATAAACCCA+AGG - Chr6:70182464-70182483 MsG0680033645.01.T01:intron 15.0%
!!! AATTCAACATTTTCTTAAAT+TGG + Chr6:70180695-70180714 None:intergenic 15.0%
!!! ACGAAAGAATTTTTATAAAT+GGG - Chr6:70184210-70184229 MsG0680033645.01.T01:intron 15.0%
!!! ATAAGTATATTGATGATATT+GGG - Chr6:70180150-70180169 MsG0680033645.01.T01:three_prime_UTR 15.0%
!!! ATTTTTTTTTTTAAAGGGTT+TGG - Chr6:70186685-70186704 MsG0680033645.01.T01:intron 15.0%
!!! CATGTCTTTTTTATTTTAAT+AGG - Chr6:70180952-70180971 MsG0680033645.01.T01:CDS 15.0%
!!! GATATAAAAATTGTGTTTTT+CGG - Chr6:70187432-70187451 MsG0680033645.01.T01:intron 15.0%
!!! GTTTATTTTCTCATATTTTA+TGG - Chr6:70185539-70185558 MsG0680033645.01.T01:intron 15.0%
!!! TACTATTTTGAACTATAAAA+AGG - Chr6:70183211-70183230 MsG0680033645.01.T01:CDS 15.0%
!!! TCAATTTATGTTTTTAATGA+TGG - Chr6:70182753-70182772 MsG0680033645.01.T01:intron 15.0%
!!! TGTATTTTATTGTTACTTTT+TGG - Chr6:70187568-70187587 MsG0680033645.01.T01:CDS 15.0%
!!! TTAAAGTTATTTTTTCTGAA+AGG - Chr6:70183039-70183058 MsG0680033645.01.T01:CDS 15.0%
!!! TTATTTAGGTTCTATAATTT+AGG + Chr6:70182612-70182631 None:intergenic 15.0%
!!! TTTATTTTCTCATTTTTTAG+AGG - Chr6:70185517-70185536 MsG0680033645.01.T01:intron 15.0%
!! AAAAAAGTAAAATGTGTCAA+TGG + Chr6:70181880-70181899 None:intergenic 20.0%
!! AAAAAAGTTAACAATCAACT+TGG - Chr6:70186450-70186469 MsG0680033645.01.T01:intron 20.0%
!! AAAAGTAATTGGATAAAGAA+AGG + Chr6:70185837-70185856 None:intergenic 20.0%
!! AAAATATGCAATAATTTGGA+AGG + Chr6:70185405-70185424 None:intergenic 20.0%
!! AAATTTCAAAAGATCTGATT+TGG - Chr6:70183503-70183522 MsG0680033645.01.T01:intron 20.0%
!! AACAATAAAATACAAAAGTG+AGG + Chr6:70187562-70187581 None:intergenic 20.0%
!! AATATAAGACATGTGATAAA+GGG - Chr6:70185473-70185492 MsG0680033645.01.T01:intron 20.0%
!! AATTAACAGTTATATATCGT+TGG + Chr6:70182348-70182367 None:intergenic 20.0%
!! ACATGAAAAAAGGATTTAAT+TGG + Chr6:70186207-70186226 None:intergenic 20.0%
!! AGACAATGTATTAACTAATA+AGG + Chr6:70187499-70187518 None:intergenic 20.0%
!! ATAAGTACAAACATGAAAAA+AGG + Chr6:70186217-70186236 None:intergenic 20.0%
!! ATACTATAATATACCACTTA+TGG - Chr6:70185588-70185607 MsG0680033645.01.T01:intron 20.0%
!! ATATCATTAAAATTACTCTG+TGG + Chr6:70182268-70182287 None:intergenic 20.0%
!! ATGGTGAAAAAATAGAAAAA+AGG - Chr6:70185558-70185577 MsG0680033645.01.T01:intron 20.0%
!! CAAATTAAATAGCTAAAGTA+GGG - Chr6:70182983-70183002 MsG0680033645.01.T01:intron 20.0%
!! CATAATTCTATATTGTGATT+TGG + Chr6:70187046-70187065 None:intergenic 20.0%
!! GTAAAGAATCTTTATGAAAA+AGG + Chr6:70182874-70182893 None:intergenic 20.0%
!! GTTGAATATAATATTTGTGA+AGG + Chr6:70183861-70183880 None:intergenic 20.0%
!! TAAGAATTGTTGATCAATTA+GGG + Chr6:70180564-70180583 None:intergenic 20.0%
!! TATCACATTCTCTATAAAAT+AGG - Chr6:70182578-70182597 MsG0680033645.01.T01:intron 20.0%
!! TCAAATTAAATAGCTAAAGT+AGG - Chr6:70182982-70183001 MsG0680033645.01.T01:intron 20.0%
!! TCTTATACTATGATATGATA+TGG + Chr6:70183382-70183401 None:intergenic 20.0%
!! TCTTTACGTTAATTATTCTT+GGG - Chr6:70182887-70182906 MsG0680033645.01.T01:intron 20.0%
!! TTAAGAATTGTTGATCAATT+AGG + Chr6:70180565-70180584 None:intergenic 20.0%
!! TTACTTAAAACAACATTTCA+AGG - Chr6:70184884-70184903 MsG0680033645.01.T01:intron 20.0%
!! TTCTTTACGTTAATTATTCT+TGG - Chr6:70182886-70182905 MsG0680033645.01.T01:intron 20.0%
!! TTGGGATATATTATTACAAT+GGG - Chr6:70182690-70182709 MsG0680033645.01.T01:intron 20.0%
!! TTGTAAAACATATAAGAAAG+AGG + Chr6:70181463-70181482 None:intergenic 20.0%
!! TTTGTTTCCTAATAAAATAC+TGG + Chr6:70181758-70181777 None:intergenic 20.0%
!!! AATAGGAGTTTAATGTTTTA+AGG - Chr6:70180969-70180988 MsG0680033645.01.T01:CDS 20.0%
!!! AATTTGACTTTATAATCTGA+GGG + Chr6:70186904-70186923 None:intergenic 20.0%
!!! ACTTGTTAAATATCCTATTT+GGG - Chr6:70186536-70186555 MsG0680033645.01.T01:intron 20.0%
!!! AGATCTAAAATTCTTACTTT+TGG + Chr6:70181385-70181404 None:intergenic 20.0%
!!! ATAGGAGTTTAATGTTTTAA+GGG - Chr6:70180970-70180989 MsG0680033645.01.T01:CDS 20.0%
!!! ATATATACATTGACTATATC+TGG - Chr6:70183578-70183597 MsG0680033645.01.T01:intron 20.0%
!!! ATGTTTAGATTTTATTGAAG+TGG - Chr6:70185337-70185356 MsG0680033645.01.T01:intron 20.0%
!!! ATGTTTTAAGGGAATATAAT+AGG - Chr6:70180981-70181000 MsG0680033645.01.T01:CDS 20.0%
!!! ATGTTTTTCATTTAGTCTAA+AGG - Chr6:70185866-70185885 MsG0680033645.01.T01:intron 20.0%
!!! CATAATTTGTAGTATTAAAG+TGG - Chr6:70185647-70185666 MsG0680033645.01.T01:intron 20.0%
!!! CGAAAGAATTTTTATAAATG+GGG - Chr6:70184211-70184230 MsG0680033645.01.T01:intron 20.0%
!!! CTAGATTTTTTTATAAGAAG+AGG - Chr6:70182496-70182515 MsG0680033645.01.T01:intron 20.0%
!!! GAATATGTGTAACATTATTT+TGG - Chr6:70184592-70184611 MsG0680033645.01.T01:intron 20.0%
!!! GACGAAAGAATTTTTATAAA+TGG - Chr6:70184209-70184228 MsG0680033645.01.T01:intron 20.0%
!!! GATAAGTATATTGATGATAT+TGG - Chr6:70180149-70180168 MsG0680033645.01.T01:three_prime_UTR 20.0%
!!! TATAATTTTCTCGCAAAATA+AGG - Chr6:70180822-70180841 MsG0680033645.01.T01:intron 20.0%
!!! TATATACATTGACTATATCT+GGG - Chr6:70183579-70183598 MsG0680033645.01.T01:intron 20.0%
!!! TATTATTATTGGTCACTTTT+AGG - Chr6:70186234-70186253 MsG0680033645.01.T01:intron 20.0%
!!! TCATAAAGAGTATAGATTAT+AGG - Chr6:70181157-70181176 MsG0680033645.01.T01:intron 20.0%
!!! TCTTACATTTTTTTAGATGA+GGG - Chr6:70182800-70182819 MsG0680033645.01.T01:intron 20.0%
!!! TTCTATAATTTGAAATTGAG+AGG - Chr6:70182637-70182656 MsG0680033645.01.T01:intron 20.0%
!!! TTGACACATTTTACTTTTTT+AGG - Chr6:70181880-70181899 MsG0680033645.01.T01:intron 20.0%
!!! TTTAAGATTTCATGTTTCTT+AGG + Chr6:70179941-70179960 None:intergenic 20.0%
!!! TTTGGGATATATTATTACAA+TGG - Chr6:70182689-70182708 MsG0680033645.01.T01:intron 20.0%
!!! TTTTACTTTGTTGAATTAGA+TGG - Chr6:70184979-70184998 MsG0680033645.01.T01:intron 20.0%
!!! TTTTTCTTTTGATGAGTTTA+TGG + Chr6:70184538-70184557 None:intergenic 20.0%
! AAAGAAAAAGGACAATTGTT+GGG + Chr6:70183451-70183470 None:intergenic 25.0%
! AAAGTATACCTGTCATATAA+AGG + Chr6:70186790-70186809 None:intergenic 25.0%
! AAATAAAAAAGACATGGACA+AGG + Chr6:70180948-70180967 None:intergenic 25.0%
! AAATCATGTAATGTAGTCTA+TGG + Chr6:70183954-70183973 None:intergenic 25.0%
! AATAAGCATTCATGTCTAAT+AGG + Chr6:70186497-70186516 None:intergenic 25.0%
! AATGTTACACATATTCTTAG+AGG + Chr6:70184588-70184607 None:intergenic 25.0%
! AATTCTAAACATATCAAGCA+TGG - Chr6:70184644-70184663 MsG0680033645.01.T01:intron 25.0%
! ACACAGTGAAATAATAAAAC+AGG + Chr6:70181609-70181628 None:intergenic 25.0%
! AGAAAAACTATACCATATTC+AGG + Chr6:70184509-70184528 None:intergenic 25.0%
! ATAAAATACAAAAGTGAGGA+AGG + Chr6:70187558-70187577 None:intergenic 25.0%
! ATAGAGAAGTAGAATTTAGT+TGG - Chr6:70182070-70182089 MsG0680033645.01.T01:intron 25.0%
! ATAGTTAAGTGAAACAATGT+CGG - Chr6:70181191-70181210 MsG0680033645.01.T01:intron 25.0%
! ATATATATGTCTACATTACC+CGG + Chr6:70183564-70183583 None:intergenic 25.0%
! ATTAGACATGAATGCTTATT+TGG - Chr6:70186497-70186516 MsG0680033645.01.T01:intron 25.0%
! ATTGCAAATTCACTCAAAAT+AGG - Chr6:70185224-70185243 MsG0680033645.01.T01:intron 25.0%
! CTCAAATGACAATACTATTT+AGG - Chr6:70187316-70187335 MsG0680033645.01.T01:intron 25.0%
! GAAAATTTACAGATAACAAG+TGG + Chr6:70186101-70186120 None:intergenic 25.0%
! GAATATAAGACATGTGATAA+AGG - Chr6:70185472-70185491 MsG0680033645.01.T01:intron 25.0%
! GTTAATACATTGTCTATTAG+AGG - Chr6:70187504-70187523 MsG0680033645.01.T01:intron 25.0%
! TAAAGAAAAAGGACAATTGT+TGG + Chr6:70183452-70183471 None:intergenic 25.0%
! TAACGTTCATATGATCATAT+CGG + Chr6:70180659-70180678 None:intergenic 25.0%
! TATATGTACTCTTGTATCTA+AGG - Chr6:70180587-70180606 MsG0680033645.01.T01:intron 25.0%
! TATGAAAAAGGAATCATTAC+TGG + Chr6:70182862-70182881 None:intergenic 25.0%
! TCATATGAACCTAAATAACA+AGG - Chr6:70182551-70182570 MsG0680033645.01.T01:intron 25.0%
! TCTATATATTACATGGATAG+AGG + Chr6:70186012-70186031 None:intergenic 25.0%
! TGACTAGTAGAAAATTATTG+AGG + Chr6:70182736-70182755 None:intergenic 25.0%
! TGATTGGAATGTATCATAAT+TGG - Chr6:70186622-70186641 MsG0680033645.01.T01:intron 25.0%
! TGTAAAATAAGATTGTCTTG+CGG + Chr6:70181258-70181277 None:intergenic 25.0%
! TTAGACATGAATGCTTATTT+GGG - Chr6:70186498-70186517 MsG0680033645.01.T01:intron 25.0%
! TTATATAGTCCATATATCCA+AGG + Chr6:70184619-70184638 None:intergenic 25.0%
!! AAAGTAAAGAGCATAATCAA+TGG - Chr6:70187201-70187220 MsG0680033645.01.T01:intron 25.0%
!! AAGTTGATTAATCTTGAAGA+TGG - Chr6:70180173-70180192 MsG0680033645.01.T01:three_prime_UTR 25.0%
!! ATTTGCAATCCAAATGATTT+TGG + Chr6:70185213-70185232 None:intergenic 25.0%
!! ATTTTCTTGATATGAACCTA+AGG - Chr6:70182519-70182538 MsG0680033645.01.T01:intron 25.0%
!! CACTTGTTAAATATCCTATT+TGG - Chr6:70186535-70186554 MsG0680033645.01.T01:intron 25.0%
!! CTAAATAGTATTGTCATTTG+AGG + Chr6:70187318-70187337 None:intergenic 25.0%
!! GAATTTGACTTTATAATCTG+AGG + Chr6:70186905-70186924 None:intergenic 25.0%
!! TACAACTTTTCGATAAAGAT+TGG - Chr6:70181495-70181514 MsG0680033645.01.T01:intron 25.0%
!! TTTAGCTACATTCTCAATTT+TGG + Chr6:70185134-70185153 None:intergenic 25.0%
!! TTTGCAATCCAAATGATTTT+GGG + Chr6:70185212-70185231 None:intergenic 25.0%
!! TTTTTATATAAACCCAAGGA+AGG - Chr6:70182468-70182487 MsG0680033645.01.T01:intron 25.0%
!! TTTTTGTGCATTGAAATCTA+TGG - Chr6:70185422-70185441 MsG0680033645.01.T01:intron 25.0%
!!! AGAAAGTTGATATTGCTATT+TGG - Chr6:70185179-70185198 MsG0680033645.01.T01:intron 25.0%
!!! ATCTGTGTTACTGTTTTTTA+AGG + Chr6:70183670-70183689 None:intergenic 25.0%
!!! GAAAGTTGATATTGCTATTT+GGG - Chr6:70185180-70185199 MsG0680033645.01.T01:intron 25.0%
!!! GTCTTACATTTTTTTAGATG+AGG - Chr6:70182799-70182818 MsG0680033645.01.T01:intron 25.0%
!!! TATATTGTGATTTGGTTGAA+TGG + Chr6:70187038-70187057 None:intergenic 25.0%
!!! TATTTGCTGTGAAGAAATAT+TGG - Chr6:70187282-70187301 MsG0680033645.01.T01:intron 25.0%
!!! TGATAAAGACCTTGTTATTT+AGG + Chr6:70182563-70182582 None:intergenic 25.0%
!!! TTATTTTGCAGCTCTTTTAA+CGG - Chr6:70180868-70180887 MsG0680033645.01.T01:intron 25.0%
!!! TTGGATTTTAATTGTTTTGC+AGG - Chr6:70186704-70186723 MsG0680033645.01.T01:intron 25.0%
!!! TTGGTTAGCTGTTTTAAAAT+TGG + Chr6:70186125-70186144 None:intergenic 25.0%
!!! TTTTTTTTCCAGTAGTTTAG+TGG + Chr6:70185795-70185814 None:intergenic 25.0%
AAATCTAGAAAAACCTTCCT+TGG + Chr6:70182484-70182503 None:intergenic 30.0%
AAGCAAATGGAGAAAAAAGT+AGG + Chr6:70187344-70187363 None:intergenic 30.0%
AATCTAGAAAAACCTTCCTT+GGG + Chr6:70182483-70182502 None:intergenic 30.0%
ACAACGATTTACATTTGTCA+TGG + Chr6:70182781-70182800 None:intergenic 30.0%
ACTTCTTTCACATACATCTA+AGG - Chr6:70182012-70182031 MsG0680033645.01.T01:intron 30.0%
AGCAAATGGAGAAAAAAGTA+GGG + Chr6:70187343-70187362 None:intergenic 30.0%
ATAACCATATCCCATTGAAT+AGG - Chr6:70181054-70181073 MsG0680033645.01.T01:intron 30.0%
ATATACTTATCAGCACCATT+AGG + Chr6:70180140-70180159 None:intergenic 30.0%
ATGAATGAGTCGCATATTAA+TGG - Chr6:70183284-70183303 MsG0680033645.01.T01:intron 30.0%
ATGATCATATGAACGTTATG+AGG - Chr6:70180661-70180680 MsG0680033645.01.T01:intron 30.0%
ATGCAATGTCTTTATCACAA+AGG + Chr6:70185918-70185937 None:intergenic 30.0%
ATGTAATGTAGTCTATGGTA+TGG + Chr6:70183949-70183968 None:intergenic 30.0%
ATTACATTAAAGTCATGTGC+TGG - Chr6:70183982-70184001 MsG0680033645.01.T01:intron 30.0%
ATTACTCTGTGGTTATTTGA+TGG + Chr6:70182257-70182276 None:intergenic 30.0%
ATTCAATGGGATATGGTTAT+TGG + Chr6:70181054-70181073 None:intergenic 30.0%
ATTGGTAGAAATTAAGTGTG+AGG + Chr6:70186189-70186208 None:intergenic 30.0%
CAACGATTTACATTTGTCAT+GGG + Chr6:70182780-70182799 None:intergenic 30.0%
CATATGATAAAACCTTCCTT+AGG + Chr6:70182538-70182557 None:intergenic 30.0%
CCTTTGTTGGAATAAAATAG+TGG - Chr6:70185156-70185175 MsG0680033645.01.T01:intron 30.0%
CTAATTATTACACTTCCTTC+TGG + Chr6:70187160-70187179 None:intergenic 30.0%
GAAATTCAGTTTAATTGTGC+AGG - Chr6:70187617-70187636 MsG0680033645.01.T01:CDS 30.0%
GAAGAAATATTGGAAAGGAT+GGG - Chr6:70185076-70185095 MsG0680033645.01.T01:intron 30.0%
TACCAATTGAGTTAAGCTAA+CGG + Chr6:70185687-70185706 None:intergenic 30.0%
TATATGCACTTCTCTTAGTA+CGG + Chr6:70184272-70184291 None:intergenic 30.0%
TATGTTAGAATCTTGTAGCA+CGG + Chr6:70184828-70184847 None:intergenic 30.0%
TCTCAAAAGACAATCAACTA+TGG - Chr6:70186408-70186427 MsG0680033645.01.T01:intron 30.0%
TGAAGTGGTTAAAAGATGTT+AGG - Chr6:70185352-70185371 MsG0680033645.01.T01:intron 30.0%
TGATCATATGAACGTTATGA+GGG - Chr6:70180662-70180681 MsG0680033645.01.T01:intron 30.0%
TGTAAGCAAACTTTGTTGAA+TGG - Chr6:70187595-70187614 MsG0680033645.01.T01:CDS 30.0%
TTATCAACCAACATCATCAT+TGG + Chr6:70184073-70184092 None:intergenic 30.0%
TTGAACTATAAAAAGGTCGT+TGG - Chr6:70183218-70183237 MsG0680033645.01.T01:CDS 30.0%
TTGGAGCAATATATGAAAGA+GGG - Chr6:70186598-70186617 MsG0680033645.01.T01:intron 30.0%
TTGTTTATTTGTGAGTTCAG+TGG + Chr6:70186931-70186950 None:intergenic 30.0%
TTTGATAAACCTGAGATGAT+TGG + Chr6:70185626-70185645 None:intergenic 30.0%
! ACAAAGAAGAAATTTCAGGT+GGG - Chr6:70186302-70186321 MsG0680033645.01.T01:intron 30.0%
! ACCAACATTTGTTAGTTGAA+AGG + Chr6:70186166-70186185 None:intergenic 30.0%
! ATATATGAAAGAGGGTTGAT+TGG - Chr6:70186606-70186625 MsG0680033645.01.T01:intron 30.0%
! ATTGATTTCAGTTGTTCAAC+TGG - Chr6:70180741-70180760 MsG0680033645.01.T01:intron 30.0%
! CCAACATTTGTTAGTTGAAA+GGG + Chr6:70186165-70186184 None:intergenic 30.0%
! CCACTATTTTATTCCAACAA+AGG + Chr6:70185159-70185178 None:intergenic 30.0%
! GGTTTCACCAGTATTTTATT+AGG - Chr6:70181748-70181767 MsG0680033645.01.T01:intron 30.0%
! TGTAATACCAATGATGATGT+TGG - Chr6:70184063-70184082 MsG0680033645.01.T01:intron 30.0%
!! ATTGTCTTTTGAGAATGTTG+GGG + Chr6:70186402-70186421 None:intergenic 30.0%
!! GAGACTTTTTCTTAAATCAG+AGG - Chr6:70183789-70183808 MsG0680033645.01.T01:intron 30.0%
!! GATTGTCTTTTGAGAATGTT+GGG + Chr6:70186403-70186422 None:intergenic 30.0%
!! GTAAGACTTTTAGAAGCAAA+TGG + Chr6:70187357-70187376 None:intergenic 30.0%
!! GTATCAACTTTAGCTTGAAT+AGG + Chr6:70186576-70186595 None:intergenic 30.0%
!! TGATTGTCTTTTGAGAATGT+TGG + Chr6:70186404-70186423 None:intergenic 30.0%
!!! CTACATTCTCAATTTTGGTT+TGG + Chr6:70185129-70185148 None:intergenic 30.0%
!!! GCAGAGTTGTTTTAATAGAA+GGG - Chr6:70184147-70184166 MsG0680033645.01.T01:intron 30.0%
!!! TATTTTGGTCCTTGGATATA+TGG - Chr6:70184607-70184626 MsG0680033645.01.T01:intron 30.0%
!!! TGTAACATTATTTTGGTCCT+TGG - Chr6:70184599-70184618 MsG0680033645.01.T01:intron 30.0%
AAAAAGGACAATTGTTGGGA+TGG + Chr6:70183447-70183466 None:intergenic 35.0%
AAAGGATTCTTGTAACCGTT+TGG + Chr6:70179980-70179999 None:intergenic 35.0%
AAATTGTGGACCATGAAGAT+GGG - Chr6:70187241-70187260 MsG0680033645.01.T01:intron 35.0%
AACAATCAACTTGGAAAAGC+TGG - Chr6:70186459-70186478 MsG0680033645.01.T01:intron 35.0%
AACACAGAATCAGCATGAAT+AGG + Chr6:70186764-70186783 None:intergenic 35.0%
AACAGTTTCAATTGCACCAA+GGG - Chr6:70184346-70184365 MsG0680033645.01.T01:intron 35.0%
AACTCCTATTCAATGGGATA+TGG + Chr6:70181061-70181080 None:intergenic 35.0%
AATACAAAAGTGAGGAAGGA+AGG + Chr6:70187554-70187573 None:intergenic 35.0%
ACATGTTGAGCAACATTGTA+GGG + Chr6:70184046-70184065 None:intergenic 35.0%
ACCAATTGAGTTAAGCTAAC+GGG + Chr6:70185686-70185705 None:intergenic 35.0%
ACCACATTCATAACCCAAAT+AGG + Chr6:70186552-70186571 None:intergenic 35.0%
ACTAAATGTACACGTAGCTA+AGG - Chr6:70182411-70182430 MsG0680033645.01.T01:intron 35.0%
AGAAAAATGAAGCACATACC+AGG + Chr6:70185284-70185303 None:intergenic 35.0%
AGAATTCACCCAAAAAAGAC+AGG + Chr6:70181818-70181837 None:intergenic 35.0%
AGACATATTGCTAGAGATGT+AGG - Chr6:70187125-70187144 MsG0680033645.01.T01:intron 35.0%
AGGCTTAAAGTGAACAACAA+AGG + Chr6:70184568-70184587 None:intergenic 35.0%
AGGTAGTAACTCCTATTCAA+TGG + Chr6:70181068-70181087 None:intergenic 35.0%
AGTACAATTGAGCATGTTCA+AGG + Chr6:70183693-70183712 None:intergenic 35.0%
ATATGCGACTCATTCATGAA+TGG + Chr6:70183281-70183300 None:intergenic 35.0%
ATGAAAAATCCAAGCACAAG+AGG + Chr6:70185309-70185328 None:intergenic 35.0%
ATGCCCTTTGATTATCAGTT+TGG - Chr6:70183254-70183273 MsG0680033645.01.T01:intron 35.0%
ATGTAGCTAAAAGCCTTTGT+TGG - Chr6:70185143-70185162 MsG0680033645.01.T01:intron 35.0%
CAATATTTCTTCCAGCGAAT+TGG + Chr6:70185068-70185087 None:intergenic 35.0%
CAATTCGCTGGAAGAAATAT+TGG - Chr6:70185066-70185085 MsG0680033645.01.T01:intron 35.0%
CACAAAGAAGAAATTTCAGG+TGG - Chr6:70186301-70186320 MsG0680033645.01.T01:intron 35.0%
CACCTGAAATTTCTTCTTTG+TGG + Chr6:70186303-70186322 None:intergenic 35.0%
CAGGTGGGGAATTAAATAAT+TGG - Chr6:70186317-70186336 MsG0680033645.01.T01:intron 35.0%
CAGTCGTTGTCTTACATAAT+AGG - Chr6:70182823-70182842 MsG0680033645.01.T01:intron 35.0%
CATGAATAGGTCATAAGTCT+AGG + Chr6:70186751-70186770 None:intergenic 35.0%
CCCTTTCAACTAACAAATGT+TGG - Chr6:70186162-70186181 MsG0680033645.01.T01:intron 35.0%
CTTGGAGCAATATATGAAAG+AGG - Chr6:70186597-70186616 MsG0680033645.01.T01:intron 35.0%
GAAACTTATCACCGTCAAAA+CGG + Chr6:70180090-70180109 None:intergenic 35.0%
GAATTCACCCAAAAAAGACA+GGG + Chr6:70181817-70181836 None:intergenic 35.0%
GAGAAGTAGAATTTAGTTGG+AGG - Chr6:70182073-70182092 MsG0680033645.01.T01:intron 35.0%
GAGCTGCAAAATAATAGAGT+TGG + Chr6:70180862-70180881 None:intergenic 35.0%
GATACAATGCTTAAGGATGA+AGG + Chr6:70181088-70181107 None:intergenic 35.0%
GATTTCAAAGGGACCATTAA+AGG - Chr6:70186369-70186388 MsG0680033645.01.T01:intron 35.0%
GGAAGAAATATTGGAAAGGA+TGG - Chr6:70185075-70185094 MsG0680033645.01.T01:intron 35.0%
GGTAGTAACTCCTATTCAAT+GGG + Chr6:70181067-70181086 None:intergenic 35.0%
GTCCACAAAGAAGAAATTTC+AGG - Chr6:70186298-70186317 MsG0680033645.01.T01:intron 35.0%
GTGCATATATTAATGTGTGC+AGG - Chr6:70184283-70184302 MsG0680033645.01.T01:intron 35.0%
TAACAGTTTCAATTGCACCA+AGG - Chr6:70184345-70184364 MsG0680033645.01.T01:intron 35.0%
TACATGTTGAGCAACATTGT+AGG + Chr6:70184047-70184066 None:intergenic 35.0%
TATGGATCTAGCGAATTTCT+AGG + Chr6:70183364-70183383 None:intergenic 35.0%
TATGTCACGTGATAGTAGAT+AGG + Chr6:70184324-70184343 None:intergenic 35.0%
TATTCTTGGGTACTTTCAGT+GGG - Chr6:70182900-70182919 MsG0680033645.01.T01:intron 35.0%
TCAATGGGATACAATGCTTA+AGG + Chr6:70181095-70181114 None:intergenic 35.0%
TCCATCAACACACATTCAAT+GGG + Chr6:70181110-70181129 None:intergenic 35.0%
TCTGCTTTGTAGATGTGAAT+TGG - Chr6:70187101-70187120 MsG0680033645.01.T01:intron 35.0%
TCTTCTTTGTGGACACTTTA+GGG + Chr6:70186292-70186311 None:intergenic 35.0%
TCTTGATATGAACCTAAGGA+AGG - Chr6:70182523-70182542 MsG0680033645.01.T01:intron 35.0%
TGCCCTTTGATTATCAGTTT+GGG - Chr6:70183255-70183274 MsG0680033645.01.T01:intron 35.0%
TGGAAAAAGCTGGTCAAAAT+TGG - Chr6:70180062-70180081 MsG0680033645.01.T01:three_prime_UTR 35.0%
TGTACCTTACCGTCATTTAA+CGG - Chr6:70180039-70180058 MsG0680033645.01.T01:three_prime_UTR 35.0%
TTATTCTGCTCTTGGCAAAA+AGG + Chr6:70185250-70185269 None:intergenic 35.0%
TTATTCTTGGGTACTTTCAG+TGG - Chr6:70182899-70182918 MsG0680033645.01.T01:intron 35.0%
TTCGAACGACATAAGTTGTT+CGG - Chr6:70187394-70187413 MsG0680033645.01.T01:CDS 35.0%
TTCTTCTTTGTGGACACTTT+AGG + Chr6:70186293-70186312 None:intergenic 35.0%
TTGTTAGTTGAAAGGGACTT+GGG + Chr6:70186158-70186177 None:intergenic 35.0%
TTTGTTAGTTGAAAGGGACT+TGG + Chr6:70186159-70186178 None:intergenic 35.0%
! AAAGAGCATAATCAATGGCT+TGG - Chr6:70187206-70187225 MsG0680033645.01.T01:intron 35.0%
! AAATTGAGAGGTCTTTTGTC+TGG - Chr6:70182649-70182668 MsG0680033645.01.T01:intron 35.0%
! AAGTGTATAAGTGAAGTGTC+TGG + Chr6:70185749-70185768 None:intergenic 35.0%
! AATTGAGAGGTCTTTTGTCT+GGG - Chr6:70182650-70182669 MsG0680033645.01.T01:intron 35.0%
! AGTGTATAAGTGAAGTGTCT+GGG + Chr6:70185748-70185767 None:intergenic 35.0%
! AGTTGCGTTATGCCATTTAT+AGG + Chr6:70183748-70183767 None:intergenic 35.0%
! ATAGTATTGTCATTTGAGGC+AGG + Chr6:70187314-70187333 None:intergenic 35.0%
! ATGGGATATGGTTATTGGTT+AGG + Chr6:70181049-70181068 None:intergenic 35.0%
! CAAAATTGGATCCGTTTTGA+CGG - Chr6:70180076-70180095 MsG0680033645.01.T01:three_prime_UTR 35.0%
! CAAAGAAGAAATTTCAGGTG+GGG - Chr6:70186303-70186322 MsG0680033645.01.T01:intron 35.0%
! CTTTTTCCACCGTTAAATGA+CGG + Chr6:70180051-70180070 None:intergenic 35.0%
! GGTACATTATATGCCATTTG+TGG - Chr6:70185373-70185392 MsG0680033645.01.T01:intron 35.0%
! GTGTTTAGCCTTTATATGAC+AGG - Chr6:70186779-70186798 MsG0680033645.01.T01:intron 35.0%
! GTTCAATTTGCTCTTGAAAG+AGG - Chr6:70184386-70184405 MsG0680033645.01.T01:intron 35.0%
! TCCTATTTGGGTTATGAATG+TGG - Chr6:70186548-70186567 MsG0680033645.01.T01:intron 35.0%
! TTTTCCAGTAGTTTAGTGGT+TGG + Chr6:70185791-70185810 None:intergenic 35.0%
! TTTTTCTATCCTCTTGTGCT+TGG - Chr6:70185297-70185316 MsG0680033645.01.T01:intron 35.0%
!! AAGATCTGATTTGGTACAAG+TGG - Chr6:70183512-70183531 MsG0680033645.01.T01:intron 35.0%
!! CAAGCTAAAGTTGATACACT+TGG - Chr6:70186579-70186598 MsG0680033645.01.T01:intron 35.0%
!! TGGTGTTATACTAGCGTTAT+AGG - Chr6:70180761-70180780 MsG0680033645.01.T01:exon 35.0%
!! TTGTGTTTTTCGGATGTGTA+TGG - Chr6:70187442-70187461 MsG0680033645.01.T01:intron 35.0%
!!! CGCAGAGTTGTTTTAATAGA+AGG - Chr6:70184146-70184165 MsG0680033645.01.T01:intron 35.0%
!!! TCTTTGTCCCTGTCTTTTTT+GGG - Chr6:70181807-70181826 MsG0680033645.01.T01:intron 35.0%
AACCCTATGGTACTTTGGTA+TGG - Chr6:70180273-70180292 MsG0680033645.01.T01:three_prime_UTR 40.0%
ACCTGAGATGATTGGATGAT+TGG + Chr6:70185618-70185637 None:intergenic 40.0%
ACTATACCATATTCAGGCCA+TGG + Chr6:70184503-70184522 None:intergenic 40.0%
AGAACAATGTGCCATGTCAA+AGG + Chr6:70184468-70184487 None:intergenic 40.0%
AGGTGTTCCTGCAATTATTG+GGG - Chr6:70184406-70184425 MsG0680033645.01.T01:intron 40.0%
ATTCTTGGGTACTTTCAGTG+GGG - Chr6:70182901-70182920 MsG0680033645.01.T01:intron 40.0%
CAAATTGTGGACCATGAAGA+TGG - Chr6:70187240-70187259 MsG0680033645.01.T01:intron 40.0%
CATATGAACGTTATGAGGGT+TGG - Chr6:70180666-70180685 MsG0680033645.01.T01:intron 40.0%
CATATTCAGGCCATGGAATA+AGG + Chr6:70184496-70184515 None:intergenic 40.0%
CATTTAACGGTGGAAAAAGC+TGG - Chr6:70180052-70180071 MsG0680033645.01.T01:three_prime_UTR 40.0%
CGCTGGAAGAAATATTGGAA+AGG - Chr6:70185071-70185090 MsG0680033645.01.T01:intron 40.0%
CTCCATCAACACACATTCAA+TGG + Chr6:70181111-70181130 None:intergenic 40.0%
CTTATTCCATGGCCTGAATA+TGG - Chr6:70184494-70184513 MsG0680033645.01.T01:intron 40.0%
GACATGAATGCTTATTTGGG+TGG - Chr6:70186501-70186520 MsG0680033645.01.T01:intron 40.0%
GATAGAATCCAATAACCACC+AGG + Chr6:70185038-70185057 None:intergenic 40.0%
GATGATTGGATGACCATAAG+TGG + Chr6:70185604-70185623 None:intergenic 40.0%
GGAATGGAAGAGTCAAATTG+TGG - Chr6:70187227-70187246 MsG0680033645.01.T01:intron 40.0%
GGCAGAAACCCAAAATCATT+TGG - Chr6:70185201-70185220 MsG0680033645.01.T01:intron 40.0%
GGCCCAAACTGATAATCAAA+GGG + Chr6:70183260-70183279 None:intergenic 40.0%
GGTGGTACTATGTTTCCTAA+TGG - Chr6:70180122-70180141 MsG0680033645.01.T01:three_prime_UTR 40.0%
GGTGGTTATTGGATTCTATC+TGG - Chr6:70185038-70185057 MsG0680033645.01.T01:intron 40.0%
GTTACAAGAATCCTTTCCCA+TGG - Chr6:70179984-70180003 MsG0680033645.01.T01:three_prime_UTR 40.0%
TAACATGACACGACACTACA+CGG - Chr6:70180301-70180320 MsG0680033645.01.T01:three_prime_UTR 40.0%
TATTTCTTCCAGCGAATTGG+TGG + Chr6:70185065-70185084 None:intergenic 40.0%
TCCAATCATCCAATCATCTC+AGG - Chr6:70185614-70185633 MsG0680033645.01.T01:intron 40.0%
TCCCATTGAATGTGTGTTGA+TGG - Chr6:70181106-70181125 MsG0680033645.01.T01:intron 40.0%
TGATGGAGCAACTCTTACAT+AGG + Chr6:70182240-70182259 None:intergenic 40.0%
TGGAAGGTAATCTCCACAAA+TGG + Chr6:70185389-70185408 None:intergenic 40.0%
TGGCCCAAACTGATAATCAA+AGG + Chr6:70183261-70183280 None:intergenic 40.0%
TGTAGGATTCTTAGACCAGA+AGG - Chr6:70187142-70187161 MsG0680033645.01.T01:intron 40.0%
TGTGAAACCCTATGGTACTT+TGG - Chr6:70180268-70180287 MsG0680033645.01.T01:three_prime_UTR 40.0%
TGTGTTATACAGCACAGACT+GGG - Chr6:70185714-70185733 MsG0680033645.01.T01:intron 40.0%
TGTTTGTGTCAGACATACGT+TGG + Chr6:70180798-70180817 None:intergenic 40.0%
TTGGAAAAGCTGGTAGATAC+AGG - Chr6:70186469-70186488 MsG0680033645.01.T01:intron 40.0%
TTGTGTTATACAGCACAGAC+TGG - Chr6:70185713-70185732 MsG0680033645.01.T01:intron 40.0%
TTTGTCACTGTGAAACCCTA+TGG - Chr6:70180260-70180279 MsG0680033645.01.T01:three_prime_UTR 40.0%
! ATAAGTTTCCGTTTTCCTGG+TGG - Chr6:70180101-70180120 MsG0680033645.01.T01:three_prime_UTR 40.0%
! GAGGTGTTCCTGCAATTATT+GGG - Chr6:70184405-70184424 MsG0680033645.01.T01:intron 40.0%
! GCATAATCAATGGCTTGGAA+TGG - Chr6:70187211-70187230 MsG0680033645.01.T01:intron 40.0%
! GTCCATACCAAAGTACCATA+GGG + Chr6:70180278-70180297 None:intergenic 40.0%
! GTGATAAGTTTCCGTTTTCC+TGG - Chr6:70180098-70180117 MsG0680033645.01.T01:three_prime_UTR 40.0%
! GTGCTGGTCACATGATTAAA+GGG - Chr6:70183998-70184017 MsG0680033645.01.T01:intron 40.0%
! GTGTATAAGTGAAGTGTCTG+GGG + Chr6:70185747-70185766 None:intergenic 40.0%
! TCCCGTTAGCTTAACTCAAT+TGG - Chr6:70185682-70185701 MsG0680033645.01.T01:intron 40.0%
! TGATGGAGTATTACTCGTCA+GGG - Chr6:70181123-70181142 MsG0680033645.01.T01:intron 40.0%
! TGTCCATACCAAAGTACCAT+AGG + Chr6:70180279-70180298 None:intergenic 40.0%
! TGTGCTGGTCACATGATTAA+AGG - Chr6:70183997-70184016 MsG0680033645.01.T01:intron 40.0%
! TTGATGGAGTATTACTCGTC+AGG - Chr6:70181122-70181141 MsG0680033645.01.T01:intron 40.0%
! TTGTTAAGAGTGTGTGTTGC+TGG + Chr6:70187069-70187088 None:intergenic 40.0%
!! AATGGTCCCTTTGAAATCCT+AGG + Chr6:70186367-70186386 None:intergenic 40.0%
!! AGAGGTGTTCCTGCAATTAT+TGG - Chr6:70184404-70184423 MsG0680033645.01.T01:intron 40.0%
!! AGTTGATAGAATTCTGCTCC+TGG - Chr6:70185017-70185036 MsG0680033645.01.T01:intron 40.0%
!! CATCATCAGTATCGACATGT+CGG + Chr6:70184696-70184715 None:intergenic 40.0%
!! CTGATTTGGTACAAGTGGAA+TGG - Chr6:70183517-70183536 MsG0680033645.01.T01:intron 40.0%
!! GGACTTGGGTTTGTTATACT+TGG + Chr6:70186144-70186163 None:intergenic 40.0%
!! GGGGTTGATTTTAGTCTTTG+AGG + Chr6:70186343-70186362 None:intergenic 40.0%
!! GTATGGGGTACTCTGATTTT+GGG - Chr6:70182672-70182691 MsG0680033645.01.T01:intron 40.0%
!!! GTCTTTGTCCCTGTCTTTTT+TGG - Chr6:70181806-70181825 MsG0680033645.01.T01:intron 40.0%
AACCCCACCTAGGATTTCAA+AGG - Chr6:70186357-70186376 MsG0680033645.01.T01:intron 45.0%
AATGTGTGCAGGTTGCTAGT+TGG - Chr6:70184294-70184313 MsG0680033645.01.T01:intron 45.0%
ACCCCACCTAGGATTTCAAA+GGG - Chr6:70186358-70186377 MsG0680033645.01.T01:intron 45.0%
ACCTTACCGTCATTTAACGG+TGG - Chr6:70180042-70180061 MsG0680033645.01.T01:three_prime_UTR 45.0%
AGAATAACCCTGACAAAGCC+TGG - Chr6:70185263-70185282 MsG0680033645.01.T01:intron 45.0%
ATGTGTGCAGGTTGCTAGTT+GGG - Chr6:70184295-70184314 MsG0680033645.01.T01:intron 45.0%
ATTCTGCTCCTGGTGGTTAT+TGG - Chr6:70185027-70185046 MsG0680033645.01.T01:intron 45.0%
CAAGCCATGTCTCTACTTGT+GGG + Chr6:70180010-70180029 None:intergenic 45.0%
CCAACCAACCACTAAACTAC+TGG - Chr6:70185784-70185803 MsG0680033645.01.T01:intron 45.0%
CCAGTAGTTTAGTGGTTGGT+TGG + Chr6:70185787-70185806 None:intergenic 45.0%
CTTTCAAGAGCCCATCTTCA+TGG + Chr6:70187254-70187273 None:intergenic 45.0%
GACTAAAATCAACCCCACCT+AGG - Chr6:70186347-70186366 MsG0680033645.01.T01:intron 45.0%
GCAAAGACCCCAATAATTGC+AGG + Chr6:70184416-70184435 None:intergenic 45.0%
GTGTAGTGTCGTGTCATGTT+AGG + Chr6:70180302-70180321 None:intergenic 45.0%
GTGTTATACAGCACAGACTG+GGG - Chr6:70185715-70185734 MsG0680033645.01.T01:intron 45.0%
GTTGAGCAACATTGTAGGGA+TGG + Chr6:70184042-70184061 None:intergenic 45.0%
TAGAATCTTGTAGCACGGCA+CGG + Chr6:70184823-70184842 None:intergenic 45.0%
TAGTACCACCACCAGGAAAA+CGG + Chr6:70180112-70180131 None:intergenic 45.0%
TATCAAGCATGGACAACCCA+CGG - Chr6:70184655-70184674 MsG0680033645.01.T01:intron 45.0%
TCCACCGTTAAATGACGGTA+AGG + Chr6:70180046-70180065 None:intergenic 45.0%
TGATAGAATTCTGCTCCTGG+TGG - Chr6:70185020-70185039 MsG0680033645.01.T01:intron 45.0%
TGTCAGGGTTATTCTGCTCT+TGG + Chr6:70185258-70185277 None:intergenic 45.0%
TGTGAGAACTGCTGTGATAC+TGG - Chr6:70180199-70180218 MsG0680033645.01.T01:three_prime_UTR 45.0%
TGTGCTTCATGAGTATCCCT+TGG + Chr6:70184365-70184384 None:intergenic 45.0%
TTCGGATGTGTATGGTGATC+TGG - Chr6:70187450-70187469 MsG0680033645.01.T01:intron 45.0%
TTGGGGTGTGACACCTTTAA+TGG + Chr6:70186385-70186404 None:intergenic 45.0%
TTGGTCACTGCTTAACGTGA+TGG - Chr6:70181514-70181533 MsG0680033645.01.T01:intron 45.0%
! ACTCTTGTATCTAAGGCGTG+TGG - Chr6:70180594-70180613 MsG0680033645.01.T01:intron 45.0%
! AGAGGTCTTTTGTCTGGGTA+TGG - Chr6:70182655-70182674 MsG0680033645.01.T01:intron 45.0%
! AGGTCTTTTGTCTGGGTATG+GGG - Chr6:70182657-70182676 MsG0680033645.01.T01:intron 45.0%
! ATTGTCATTTGAGGCAGGAG+AGG + Chr6:70187309-70187328 None:intergenic 45.0%
! GAGGTCTTTTGTCTGGGTAT+GGG - Chr6:70182656-70182675 MsG0680033645.01.T01:intron 45.0%
! GTATGGTGATCTGGTGTTGA+AGG - Chr6:70187459-70187478 MsG0680033645.01.T01:intron 45.0%
! TATCGACATGTCGGTGTCTA+CGG + Chr6:70184687-70184706 None:intergenic 45.0%
! TATCTAAGGCGTGTGGAATC+AGG - Chr6:70180601-70180620 MsG0680033645.01.T01:intron 45.0%
! TTTGTGGACACTTTAGGGAG+TGG + Chr6:70186287-70186306 None:intergenic 45.0%
!! CCATGTCAAAGGCTCTAGAA+GGG + Chr6:70184457-70184476 None:intergenic 45.0%
!! GGTATGGGGTACTCTGATTT+TGG - Chr6:70182671-70182690 MsG0680033645.01.T01:intron 45.0%
!! GTCCCTTTGAAATCCTAGGT+GGG + Chr6:70186363-70186382 None:intergenic 45.0%
!! TCAAAGGCTCTAGAAGGGAA+AGG + Chr6:70184452-70184471 None:intergenic 45.0%
!! TCCCTTTGAAATCCTAGGTG+GGG + Chr6:70186362-70186381 None:intergenic 45.0%
!! TTCTTGTAACCGTTTGGTGC+TGG + Chr6:70179974-70179993 None:intergenic 45.0%
!!! CTGGCTAGGTATGCTTTTTC+CGG - Chr6:70183542-70183561 MsG0680033645.01.T01:intron 45.0%
!!! TGGCTAGGTATGCTTTTTCC+GGG - Chr6:70183543-70183562 MsG0680033645.01.T01:intron 45.0%
!! TAAAAATGAAATAAATTTAT+AGG - Chr6:70183064-70183083 MsG0680033645.01.T01:CDS 5.0%
!! TTCAATTAAAATATAAAAAA+TGG + Chr6:70180901-70180920 None:intergenic 5.0%
!!! ATAATTAGTTTTATATTTAA+GGG + Chr6:70184126-70184145 None:intergenic 5.0%
!!! ATTAAATATAATTTTTTTAC+GGG + Chr6:70183885-70183904 None:intergenic 5.0%
ATCAAGCATGGACAACCCAC+GGG - Chr6:70184656-70184675 MsG0680033645.01.T01:intron 50.0%
ATGGCCCACAAGTAGAGACA+TGG - Chr6:70180003-70180022 MsG0680033645.01.T01:three_prime_UTR 50.0%
ATGTCTCTACTTGTGGGCCA+TGG + Chr6:70180004-70180023 None:intergenic 50.0%
CCAAGCCATGTCTCTACTTG+TGG + Chr6:70180011-70180030 None:intergenic 50.0%
CCACAAGTAGAGACATGGCT+TGG - Chr6:70180008-70180027 MsG0680033645.01.T01:three_prime_UTR 50.0%
GGAAACATAGTACCACCACC+AGG + Chr6:70180119-70180138 None:intergenic 50.0%
GGCACGGACACTTCTAACAA+AGG + Chr6:70184807-70184826 None:intergenic 50.0%
GGGATGGATCGAATCTCTGA+CGG + Chr6:70184026-70184045 None:intergenic 50.0%
TATCTGGTCCACCAATTCGC+TGG - Chr6:70185054-70185073 MsG0680033645.01.T01:intron 50.0%
TGGTACAAGTGGAATGGACC+TGG - Chr6:70183523-70183542 MsG0680033645.01.T01:intron 50.0%
TGTCGTGTTCCAGCACCAAA+CGG - Chr6:70179962-70179981 MsG0680033645.01.T01:three_prime_UTR 50.0%
TGTCTCTACTTGTGGGCCAT+GGG + Chr6:70180003-70180022 None:intergenic 50.0%
TGTGTGCAGGTTGCTAGTTG+GGG - Chr6:70184296-70184315 MsG0680033645.01.T01:intron 50.0%
! AACTGCTGTGATACTGGCTG+TGG - Chr6:70180205-70180224 MsG0680033645.01.T01:three_prime_UTR 50.0%
! ACTGCTGTGATACTGGCTGT+GGG - Chr6:70180206-70180225 MsG0680033645.01.T01:three_prime_UTR 50.0%
! AGCACATACCAGGCTTTGTC+AGG + Chr6:70185274-70185293 None:intergenic 50.0%
! AGTTTCCGTTTTCCTGGTGG+TGG - Chr6:70180104-70180123 MsG0680033645.01.T01:three_prime_UTR 50.0%
! CGGAAAAAGCATACCTAGCC+AGG + Chr6:70183544-70183563 None:intergenic 50.0%
! GCACATACCAGGCTTTGTCA+GGG + Chr6:70185273-70185292 None:intergenic 50.0%
! GTTCTCGCTGCCTTATTCCA+TGG - Chr6:70184483-70184502 MsG0680033645.01.T01:intron 50.0%
! TCTTAGGACAGTGTCGTTCG+CGG + Chr6:70179925-70179944 None:intergenic 50.0%
!! CCCTTCTAGAGCCTTTGACA+TGG - Chr6:70184454-70184473 MsG0680033645.01.T01:intron 50.0%
!! GCCATGTCAAAGGCTCTAGA+AGG + Chr6:70184458-70184477 None:intergenic 50.0%
!! GGTCCCTTTGAAATCCTAGG+TGG + Chr6:70186364-70186383 None:intergenic 50.0%
CAAGTGGAATGGACCTGGCT+AGG - Chr6:70183528-70183547 MsG0680033645.01.T01:intron 55.0%
CTACTTGTGGGCCATGGGAA+AGG + Chr6:70179998-70180017 None:intergenic 55.0%
! CTGCTGTGATACTGGCTGTG+GGG - Chr6:70180207-70180226 MsG0680033645.01.T01:three_prime_UTR 55.0%
GTGTCTACGGACTTGCCCGT+GGG + Chr6:70184674-70184693 None:intergenic 60.0%
GGTGTCTACGGACTTGCCCG+TGG + Chr6:70184675-70184694 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 70179914 70187638 70179914 ID=MsG0680033645.01;Name=MsG0680033645.01
Chr6 mRNA 70179914 70187638 70179914 ID=MsG0680033645.01.T01;Parent=MsG0680033645.01;Name=MsG0680033645.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0.33|0.42|1|0.66|0.57|7|552|251
Chr6 exon 70187523 70187638 70187523 ID=MsG0680033645.01.T01:exon:1907;Parent=MsG0680033645.01.T01
Chr6 exon 70187329 70187446 70187329 ID=MsG0680033645.01.T01:exon:1908;Parent=MsG0680033645.01.T01
Chr6 exon 70183037 70183247 70183037 ID=MsG0680033645.01.T01:exon:1909;Parent=MsG0680033645.01.T01
Chr6 exon 70182268 70182376 70182268 ID=MsG0680033645.01.T01:exon:1910;Parent=MsG0680033645.01.T01
Chr6 exon 70180909 70181061 70180909 ID=MsG0680033645.01.T01:exon:1911;Parent=MsG0680033645.01.T01
Chr6 exon 70180752 70180826 70180752 ID=MsG0680033645.01.T01:exon:1912;Parent=MsG0680033645.01.T01
Chr6 exon 70179914 70180439 70179914 ID=MsG0680033645.01.T01:exon:1913;Parent=MsG0680033645.01.T01
Chr6 CDS 70187523 70187638 70187523 ID=MsG0680033645.01.T01:cds;Parent=MsG0680033645.01.T01
Chr6 CDS 70187329 70187446 70187329 ID=MsG0680033645.01.T01:cds;Parent=MsG0680033645.01.T01
Chr6 CDS 70183037 70183247 70183037 ID=MsG0680033645.01.T01:cds;Parent=MsG0680033645.01.T01
Chr6 CDS 70182268 70182376 70182268 ID=MsG0680033645.01.T01:cds;Parent=MsG0680033645.01.T01
Chr6 CDS 70180909 70181061 70180909 ID=MsG0680033645.01.T01:cds;Parent=MsG0680033645.01.T01
Chr6 CDS 70180778 70180826 70180778 ID=MsG0680033645.01.T01:cds;Parent=MsG0680033645.01.T01
Chr6 three_prime_UTR 70180752 70180777 70180752 ID=MsG0680033645.01.T01:three_prime_utr;Parent=MsG0680033645.01.T01
Chr6 three_prime_UTR 70179914 70180439 70179914 ID=MsG0680033645.01.T01:three_prime_utr;Parent=MsG0680033645.01.T01
Gene Sequence

>MsG0680033645.01.T01

ATGATATACCGCGAACGACACTGTCCTAAGAAACATGAAATCTTAAAGTGTCGTGTTCCAGCACCAAACGGTTACAAGAATCCTTTCCCATGGCCCACAAGTAGAGACATGGCTTGTTTCCGTTTTCCTGGTGGTGGTACTATGTTTCCTAATGGTGCTGATAAGTATATTGATGATATTGGGAAGTTGATTAATCTTGAAGATGGTTCTGTGAGAACTGCTGTGATACTGGCTGTTGCTAGTTGGGGAGCCTATCTACTATCACGTGACATATTAACAGTTTCAATTGCACCAAGGGATACTCATGAAGCACAAGTTCAATTTGCTCTTGAAAGAGGTGTTCCTGCAATTATTGGGGTCTTTGCTTCAAAGAGATTACCTTTCCCTTCTAGAGCCTTTGACATGGCACATTGTTCTCGCTGCCTTATTCCATGGCCTGAATATGTGGAGAAAGTTGATATTGCTATTTGGGCAGAAACCCAAAATCATTTGGATTGCAAATTCACTCAAAATAGGCCTTTTTGCCAAGAGCAGAATAACCCTGACAAAGCCTGGAACCTATTAGACATGAATGCTTATTTGGGTGGATTTGCAGCTTCACTTGTTAAATATCCTATTTGGGTTATGAATGTGGTTCCTATTCAAGCTAAAGTTGATACACTTGGAGCAATATATGAAAGAGGGTTGATTGGAATGTATCATAATTGGTGTGAAGCTATGTCTACTTATCCTAGACTTATGACCTATTCATGCTGA
Protein sequence

>MsG0680033645.01.T01

MIYRERHCPKKHEILKCRVPAPNGYKNPFPWPTSRDMACFRFPGGGTMFPNGADKYIDDIGKLINLEDGSVRTAVILAVASWGAYLLSRDILTVSIAPRDTHEAQVQFALERGVPAIIGVFASKRLPFPSRAFDMAHCSRCLIPWPEYVEKVDIAIWAETQNHLDCKFTQNRPFCQEQNNPDKAWNLLDMNAYLGGFAASLVKYPIWVMNVVPIQAKVDTLGAIYERGLIGMYHNWCEAMSTYPRLMTYSC*