AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001785.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001785.01.T01 MTR_1g043080 89.493 276 7 3 1 275 1 255 9.82e-178 489
MsG0180001785.01.T01 MTR_1g043050 80.000 275 34 3 1 275 1 254 8.49e-160 444
MsG0180001785.01.T01 MTR_1g076150 64.260 277 78 4 1 275 1 258 2.17e-114 330
MsG0180001785.01.T01 MTR_7g096930 47.138 297 116 8 1 275 1 278 1.62e-79 242
MsG0180001785.01.T01 MTR_7g115650 51.961 204 89 4 1 198 1 201 3.17e-66 205
MsG0180001785.01.T01 MTR_1g100653 55.556 180 64 2 1 164 1 180 1.09e-65 207
MsG0180001785.01.T01 MTR_4g478180 75.214 117 29 0 1 117 2 118 1.94e-62 200
MsG0180001785.01.T01 MTR_2g011660 73.729 118 30 1 1 117 1 118 2.49e-61 197
MsG0180001785.01.T01 MTR_7g076740 74.359 117 29 1 1 116 1 117 2.87e-61 196
MsG0180001785.01.T01 MTR_2g089620 73.504 117 31 0 1 117 1 117 3.85e-61 196
MsG0180001785.01.T01 MTR_4g091490 72.881 118 31 1 1 117 1 118 1.44e-60 196
MsG0180001785.01.T01 MTR_0063s0090 46.957 230 102 4 1 220 1 220 2.04e-59 189
MsG0180001785.01.T01 MTR_7g011170 72.414 116 32 0 1 116 1 116 2.61e-59 191
MsG0180001785.01.T01 MTR_3g074520 69.492 118 36 0 1 118 1 118 4.10e-59 192
MsG0180001785.01.T01 MTR_4g082290 73.276 116 31 0 1 116 1 116 6.16e-59 193
MsG0180001785.01.T01 MTR_4g121460 70.690 116 34 0 1 116 1 116 8.66e-59 191
MsG0180001785.01.T01 MTR_2g089450 63.194 144 44 2 1 144 1 135 1.56e-58 187
MsG0180001785.01.T01 MTR_6g012690 71.552 116 33 0 1 116 1 116 1.67e-58 190
MsG0180001785.01.T01 MTR_7g117730 68.644 118 37 0 1 118 1 118 1.83e-58 187
MsG0180001785.01.T01 MTR_8g027345 68.103 116 37 0 1 116 1 116 2.17e-58 188
MsG0180001785.01.T01 MTR_8g031360 70.588 119 33 2 1 117 1 119 2.17e-58 188
MsG0180001785.01.T01 MTR_2g034790 44.783 230 109 6 1 217 1 225 4.71e-58 188
MsG0180001785.01.T01 MTR_4g073420 69.492 118 36 0 1 118 1 118 7.31e-58 186
MsG0180001785.01.T01 MTR_0251s0050 69.231 117 35 1 1 116 1 117 2.68e-57 185
MsG0180001785.01.T01 MTR_3g083540 52.500 160 76 0 5 164 34 193 3.35e-57 185
MsG0180001785.01.T01 MTR_5g029840 70.085 117 35 0 1 117 1 117 4.31e-57 186
MsG0180001785.01.T01 MTR_0008s0390 62.857 140 49 3 1 137 1 140 5.35e-57 184
MsG0180001785.01.T01 MTR_4g082230 71.552 116 33 0 1 116 1 116 2.17e-56 186
MsG0180001785.01.T01 MTR_2g067420 71.560 109 31 0 3 111 5 113 3.68e-56 184
MsG0180001785.01.T01 MTR_4g125520 47.938 194 87 4 1 191 1 183 6.15e-56 182
MsG0180001785.01.T01 MTR_0008s0470 60.432 139 52 2 1 138 1 137 1.92e-55 181
MsG0180001785.01.T01 MTR_5g007370 67.521 117 38 0 1 117 1 117 2.00e-55 181
MsG0180001785.01.T01 MTR_3g097450 55.769 156 57 1 1 156 1 144 2.56e-55 180
MsG0180001785.01.T01 MTR_7g010210 59.441 143 54 2 1 139 1 143 3.78e-54 178
MsG0180001785.01.T01 MTR_3g039990 65.000 120 42 0 1 120 2 121 4.08e-54 177
MsG0180001785.01.T01 MTR_7g010210 59.028 144 55 2 1 140 1 144 7.15e-54 176
MsG0180001785.01.T01 MTR_2g089420 45.148 237 102 8 1 228 1 218 1.74e-53 180
MsG0180001785.01.T01 MTR_0140s0030 64.655 116 41 0 1 116 2 117 2.10e-53 176
MsG0180001785.01.T01 MTR_0489s0020 64.655 116 41 0 1 116 2 117 2.10e-53 176
MsG0180001785.01.T01 MTR_8g095390 66.379 116 39 0 1 116 1 116 2.73e-53 176
MsG0180001785.01.T01 MTR_1g085040 52.514 179 74 4 1 168 1 179 5.22e-53 176
MsG0180001785.01.T01 MTR_6g012180 67.568 111 36 0 1 111 1 111 5.63e-53 175
MsG0180001785.01.T01 MTR_7g109320 70.690 116 34 0 1 116 1 116 1.36e-52 175
MsG0180001785.01.T01 MTR_3g461490 64.655 116 41 0 1 116 1 116 3.17e-52 173
MsG0180001785.01.T01 MTR_1g017000 39.382 259 132 7 1 258 1 235 3.31e-52 171
MsG0180001785.01.T01 MTR_3g065440 65.517 116 40 0 1 116 1 116 6.84e-52 172
MsG0180001785.01.T01 MTR_4g102380 64.103 117 42 0 1 117 1 117 7.01e-52 171
MsG0180001785.01.T01 MTR_0008s0280 63.158 114 42 0 1 114 1 114 8.31e-52 169
MsG0180001785.01.T01 MTR_1g085640 47.895 190 74 3 1 165 1 190 8.37e-52 174
MsG0180001785.01.T01 MTR_5g078140 65.517 116 40 0 1 116 1 116 8.95e-52 172
MsG0180001785.01.T01 MTR_7g111290 46.829 205 95 5 1 200 1 196 1.74e-51 173
MsG0180001785.01.T01 MTR_7g110830 53.205 156 69 1 1 152 1 156 2.15e-51 172
MsG0180001785.01.T01 MTR_7g087130 66.379 116 39 0 1 116 1 116 3.00e-51 171
MsG0180001785.01.T01 MTR_1g017140 51.634 153 73 1 1 152 1 153 6.42e-51 170
MsG0180001785.01.T01 MTR_5g014990 57.042 142 55 3 1 139 1 139 2.86e-50 168
MsG0180001785.01.T01 MTR_5g079670 57.759 116 49 0 2 117 1 116 1.19e-49 163
MsG0180001785.01.T01 MTR_4g105130 52.597 154 66 2 1 154 1 147 3.60e-49 166
MsG0180001785.01.T01 MTR_2g064160 60.714 112 44 0 6 117 5 116 4.91e-48 162
MsG0180001785.01.T01 MTR_4g485530 61.538 117 44 1 2 117 1 117 7.81e-48 158
MsG0180001785.01.T01 MTR_4g057635 60.169 118 46 1 1 117 1 118 8.82e-48 162
MsG0180001785.01.T01 MTR_3g103570 53.383 133 61 1 1 132 1 133 9.56e-48 162
MsG0180001785.01.T01 MTR_1g076150 52.850 193 70 4 85 275 33 206 1.46e-47 157
MsG0180001785.01.T01 MTR_3g077110 61.538 117 45 0 1 117 1 117 2.25e-47 161
MsG0180001785.01.T01 MTR_6g009430 58.120 117 49 0 1 117 1 117 3.44e-47 160
MsG0180001785.01.T01 MTR_6g090405 51.678 149 67 2 1 148 1 145 4.16e-47 158
MsG0180001785.01.T01 MTR_5g042030 65.421 107 37 0 11 117 6 112 4.46e-47 159
MsG0180001785.01.T01 MTR_7g102110 56.557 122 52 1 1 121 1 122 5.45e-47 158
MsG0180001785.01.T01 MTR_1g112760 60.000 115 46 0 3 117 4 118 1.04e-46 156
MsG0180001785.01.T01 MTR_4g065017 48.603 179 79 4 12 181 17 191 4.99e-46 157
MsG0180001785.01.T01 MTR_2g099740 58.120 117 49 0 1 117 1 117 6.16e-46 159
MsG0180001785.01.T01 MTR_2g095520 61.261 111 42 1 1 110 1 111 9.22e-46 156
MsG0180001785.01.T01 MTR_4g097570 53.425 146 66 2 1 144 1 146 1.00e-45 155
MsG0180001785.01.T01 MTR_8g017540 56.410 117 51 0 1 117 47 163 3.95e-45 157
MsG0180001785.01.T01 MTR_8g098860 56.897 116 50 0 1 116 1 116 5.08e-45 154
MsG0180001785.01.T01 MTR_8g017440 56.034 116 51 0 1 116 1 116 7.28e-45 154
MsG0180001785.01.T01 MTR_4g128670 62.162 111 41 1 1 110 1 111 1.75e-44 154
MsG0180001785.01.T01 MTR_4g097570 53.061 147 66 3 1 144 1 147 3.60e-44 151
MsG0180001785.01.T01 MTR_7g035075 58.929 112 46 0 12 123 14 125 5.86e-44 148
MsG0180001785.01.T01 MTR_8g017500 55.172 116 52 0 1 116 1 116 7.86e-44 152
MsG0180001785.01.T01 MTR_1g100667 63.462 104 38 0 13 116 14 117 1.12e-43 149
MsG0180001785.01.T01 MTR_2g097910 62.617 107 40 0 12 118 20 126 1.29e-43 150
MsG0180001785.01.T01 MTR_1g110460 43.781 201 81 4 8 177 22 221 2.46e-43 150
MsG0180001785.01.T01 MTR_5g010020 60.185 108 43 0 1 108 1 108 2.62e-43 150
MsG0180001785.01.T01 MTR_8g020490 57.759 116 45 1 1 116 1 112 3.57e-43 148
MsG0180001785.01.T01 MTR_6g055910 58.036 112 47 0 4 115 6 117 4.61e-43 148
MsG0180001785.01.T01 MTR_3g052450 47.020 151 71 2 8 152 36 183 5.71e-43 154
MsG0180001785.01.T01 MTR_3g011610 61.538 104 40 0 12 115 37 140 6.64e-43 153
MsG0180001785.01.T01 MTR_8g042410 61.538 104 40 0 12 115 37 140 7.64e-43 154
MsG0180001785.01.T01 MTR_6g006030 51.111 135 62 2 1 133 1 133 1.14e-42 145
MsG0180001785.01.T01 MTR_3g052430 47.619 147 71 1 12 152 41 187 1.34e-42 152
MsG0180001785.01.T01 MTR_8g017340 56.780 118 50 1 1 117 1 118 1.45e-42 152
MsG0180001785.01.T01 MTR_5g079220 52.679 112 53 0 7 118 16 127 2.17e-42 146
MsG0180001785.01.T01 MTR_5g079120 56.881 109 47 0 9 117 58 166 2.80e-42 147
MsG0180001785.01.T01 MTR_3g028740 62.963 108 40 0 9 116 19 126 4.24e-42 147
MsG0180001785.01.T01 MTR_4g100720 57.944 107 45 0 9 115 10 116 5.18e-42 142
MsG0180001785.01.T01 MTR_5g079290 54.128 109 50 0 10 118 15 123 5.68e-42 145
MsG0180001785.01.T01 MTR_8g017390 53.279 122 56 1 1 121 1 122 5.72e-42 150
MsG0180001785.01.T01 MTR_0197s0010 42.857 168 90 2 16 183 5 166 6.08e-42 144
MsG0180001785.01.T01 MTR_8g017350 55.932 118 51 1 1 117 1 118 2.19e-41 150
MsG0180001785.01.T01 MTR_1g086510 60.000 105 42 0 11 115 20 124 2.47e-41 143
MsG0180001785.01.T01 MTR_7g017260 45.122 164 81 3 11 170 24 182 2.68e-41 144
MsG0180001785.01.T01 MTR_1g073170 58.252 103 43 0 13 115 21 123 3.42e-41 143
MsG0180001785.01.T01 MTR_1g021230 59.615 104 42 0 12 115 57 160 4.99e-41 147
MsG0180001785.01.T01 MTR_1g045610 54.867 113 51 0 6 118 15 127 9.07e-41 142
MsG0180001785.01.T01 MTR_5g078910 54.630 108 49 0 10 117 5 112 9.51e-41 143
MsG0180001785.01.T01 MTR_5g078800 55.556 108 48 0 10 117 5 112 1.03e-40 142
MsG0180001785.01.T01 MTR_2g088170 60.748 107 42 0 9 115 26 132 1.12e-40 146
MsG0180001785.01.T01 MTR_5g078950 32.800 250 148 3 10 239 5 254 3.09e-40 140
MsG0180001785.01.T01 MTR_0001s0360 53.211 109 51 0 10 118 5 113 8.34e-40 139
MsG0180001785.01.T01 MTR_1g062940 57.143 105 45 0 12 116 6 110 2.64e-39 137
MsG0180001785.01.T01 MTR_5g078860 52.727 110 52 0 8 117 3 112 3.83e-39 139
MsG0180001785.01.T01 MTR_8g060940 55.882 102 45 0 11 112 6 107 3.96e-39 137
MsG0180001785.01.T01 MTR_0247s0040 56.311 103 45 0 11 113 6 108 4.37e-39 135
MsG0180001785.01.T01 MTR_1g086530 55.769 104 46 0 12 115 33 136 4.90e-39 138
MsG0180001785.01.T01 MTR_0193s0090 49.194 124 58 1 11 129 6 129 2.92e-38 134
MsG0180001785.01.T01 MTR_4g063100 55.340 103 46 0 13 115 8 110 1.51e-37 133
MsG0180001785.01.T01 MTR_5g078930 46.429 140 60 1 13 152 10 134 5.27e-37 130
MsG0180001785.01.T01 MTR_2g033170 58.252 103 43 0 12 114 24 126 2.00e-36 132
MsG0180001785.01.T01 MTR_2g096380 46.154 143 67 1 12 154 6 138 2.90e-36 129
MsG0180001785.01.T01 MTR_1g083630 53.846 104 48 0 12 115 12 115 2.88e-35 134
MsG0180001785.01.T01 MTR_4g123040 57.282 103 44 0 12 114 24 126 5.15e-35 128
MsG0180001785.01.T01 MTR_5g062790 52.427 103 48 1 13 114 10 112 1.76e-34 126
MsG0180001785.01.T01 MTR_5g088080 52.427 103 48 1 13 114 13 115 1.89e-34 125
MsG0180001785.01.T01 MTR_5g088150 52.427 103 48 1 13 114 13 115 1.89e-34 125
MsG0180001785.01.T01 MTR_5g488210 52.427 103 48 1 13 114 13 115 1.89e-34 125
MsG0180001785.01.T01 MTR_5g088640 52.427 103 48 1 13 114 13 115 2.41e-34 125
MsG0180001785.01.T01 MTR_5g488170 52.427 103 48 1 13 114 13 115 3.49e-34 124
MsG0180001785.01.T01 MTR_5g007300 62.500 88 33 0 1 88 53 140 5.29e-34 120
MsG0180001785.01.T01 MTR_3g045430 47.863 117 60 1 1 116 1 117 5.06e-33 122
MsG0180001785.01.T01 MTR_7g111290 44.444 162 76 5 44 200 2 154 1.40e-32 122
MsG0180001785.01.T01 MTR_8g006470 46.903 113 57 2 8 117 6 118 9.53e-32 119
MsG0180001785.01.T01 MTR_4g029540 42.308 130 73 2 8 136 6 134 1.79e-31 118
MsG0180001785.01.T01 MTR_5g088610 49.515 103 51 1 13 114 10 112 1.84e-30 117
MsG0180001785.01.T01 MTR_3g101290 50.980 102 49 1 14 115 37 137 4.40e-30 113
MsG0180001785.01.T01 MTR_6g055910 64.789 71 25 0 45 115 18 88 1.71e-29 112
MsG0180001785.01.T01 MTR_4g019370 44.697 132 66 3 14 140 38 167 4.89e-29 113
MsG0180001785.01.T01 MTR_4g063100 63.889 72 26 0 44 115 10 81 5.21e-29 110
MsG0180001785.01.T01 MTR_5g016510 50.980 102 49 1 14 115 5 105 1.89e-28 110
MsG0180001785.01.T01 MTR_5g049190 45.455 121 61 3 9 128 14 130 4.34e-28 108
MsG0180001785.01.T01 MTR_4g128190 42.105 133 52 4 10 130 9 128 4.41e-28 108
MsG0180001785.01.T01 MTR_6g015455 52.427 103 46 2 14 115 5 105 2.22e-27 111
MsG0180001785.01.T01 MTR_4g094982 48.113 106 46 2 14 115 5 105 3.07e-27 106
MsG0180001785.01.T01 MTR_2g096380 48.649 111 47 1 44 154 19 119 3.82e-27 105
MsG0180001785.01.T01 MTR_5g070020 33.953 215 102 8 12 215 120 305 1.22e-26 107
MsG0180001785.01.T01 MTR_1g085880 49.533 107 52 2 10 114 9 115 5.41e-26 101
MsG0180001785.01.T01 MTR_1g057980 35.714 196 114 5 12 200 78 268 6.96e-26 103
MsG0180001785.01.T01 MTR_7g061330 42.759 145 78 3 12 152 111 254 1.10e-25 106
MsG0180001785.01.T01 MTR_7g061330 34.000 100 64 2 14 112 61 159 3.24e-12 66.6
MsG0180001785.01.T01 MTR_7g461410 42.759 145 78 3 12 152 111 254 1.10e-25 106
MsG0180001785.01.T01 MTR_7g461410 34.000 100 64 2 14 112 61 159 3.24e-12 66.6
MsG0180001785.01.T01 MTR_3g110028 40.146 137 65 2 12 132 83 218 1.37e-25 106
MsG0180001785.01.T01 MTR_3g110028 36.000 100 62 2 14 112 33 131 2.10e-13 70.5
MsG0180001785.01.T01 MTR_7g061330 42.759 145 78 3 12 152 75 218 1.57e-25 105
MsG0180001785.01.T01 MTR_7g061330 34.000 100 64 2 14 112 25 123 3.99e-12 66.2
MsG0180001785.01.T01 MTR_1g085770 49.533 107 52 2 10 114 9 115 2.31e-25 102
MsG0180001785.01.T01 MTR_3g077650 37.748 151 74 3 3 151 168 300 2.35e-25 104
MsG0180001785.01.T01 MTR_1g026870 44.762 105 57 1 12 116 83 186 3.68e-25 105
MsG0180001785.01.T01 MTR_7g037260 31.602 231 121 6 14 236 145 346 1.28e-24 101
MsG0180001785.01.T01 MTR_6g074860 47.525 101 52 1 14 114 4 103 1.57e-24 99.0
MsG0180001785.01.T01 MTR_4g105660 37.086 151 74 4 3 151 168 299 4.52e-24 100
MsG0180001785.01.T01 MTR_5g041570 39.850 133 73 3 14 145 134 260 6.40e-24 100
MsG0180001785.01.T01 MTR_4g082040 36.429 140 82 3 10 148 101 234 1.06e-23 99.8
MsG0180001785.01.T01 MTR_7g451170 31.746 189 100 4 14 191 191 361 1.86e-23 99.0
MsG0180001785.01.T01 MTR_3g463400 40.833 120 68 2 12 130 131 248 1.01e-22 97.1
MsG0180001785.01.T01 MTR_4g088015 38.760 129 77 2 14 142 221 347 1.05e-22 97.1
MsG0180001785.01.T01 MTR_0023s0210 50.000 78 39 0 11 88 6 83 2.44e-22 88.6
MsG0180001785.01.T01 MTR_7g035350 44.660 103 54 2 17 119 228 327 3.12e-22 95.9
MsG0180001785.01.T01 MTR_3g089045 44.037 109 58 2 8 115 10 116 9.84e-21 89.7
MsG0180001785.01.T01 MTR_5g082910 44.444 99 54 1 14 112 19 116 1.49e-20 89.4
MsG0180001785.01.T01 MTR_7g037130 28.384 229 131 6 14 236 145 346 1.82e-20 90.1
MsG0180001785.01.T01 MTR_6g027340 41.176 102 59 1 14 115 16 116 2.19e-20 87.0
MsG0180001785.01.T01 MTR_7g450950 34.532 139 85 3 14 152 157 289 3.15e-20 89.0
MsG0180001785.01.T01 MTR_6g027360 41.905 105 58 2 12 115 76 178 7.74e-20 87.4
MsG0180001785.01.T01 MTR_7g086960 43.689 103 55 2 14 115 89 189 1.06e-19 87.8
MsG0180001785.01.T01 MTR_5g010650 46.392 97 51 1 12 108 108 203 2.20e-19 87.8
MsG0180001785.01.T01 MTR_5g010650 33.010 103 66 2 13 112 54 156 6.70e-11 62.8
MsG0180001785.01.T01 MTR_5g038910 28.631 241 157 6 17 245 29 266 6.91e-19 85.9
MsG0180001785.01.T01 MTR_6g027370 41.176 102 59 1 14 115 99 199 8.38e-19 85.1
MsG0180001785.01.T01 MTR_5g038910 28.631 241 157 6 17 245 29 266 1.03e-18 85.9
MsG0180001785.01.T01 MTR_7g061550 37.037 108 66 1 17 122 10 117 2.24e-18 84.0
MsG0180001785.01.T01 MTR_8g468380 35.766 137 78 3 17 153 25 151 3.18e-17 81.3
MsG0180001785.01.T01 MTR_6g055910 58.696 46 19 0 70 115 2 47 7.95e-14 69.3
MsG0180001785.01.T01 MTR_1g008970 37.008 127 65 2 48 174 124 235 1.24e-13 69.3
MsG0180001785.01.T01 MTR_4g063100 58.696 46 19 0 70 115 1 46 7.31e-13 66.2
MsG0180001785.01.T01 MTR_2g096380 42.353 85 39 1 70 154 1 75 4.45e-12 63.5
MsG0180001785.01.T01 MTR_8g017480 53.191 47 22 0 6 52 6 52 2.14e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001785.01.T01 AT3G23250 51.408 284 123 5 1 272 1 281 5.26e-87 261
MsG0180001785.01.T01 AT2G31180 49.281 278 109 6 1 275 1 249 1.74e-76 233
MsG0180001785.01.T01 AT1G06180 48.239 284 100 8 1 275 1 246 4.52e-74 227
MsG0180001785.01.T01 AT1G16490 49.107 224 101 5 3 224 5 217 2.88e-65 205
MsG0180001785.01.T01 AT4G21440 74.359 117 30 0 1 117 1 117 6.80e-64 204
MsG0180001785.01.T01 AT1G79180 59.064 171 60 4 3 170 5 168 2.89e-63 201
MsG0180001785.01.T01 AT3G61250 72.881 118 32 0 1 118 1 118 8.20e-63 200
MsG0180001785.01.T01 AT4G05100 74.576 118 29 1 1 117 1 118 5.97e-62 198
MsG0180001785.01.T01 AT5G16770 72.650 117 32 0 1 117 1 117 2.47e-61 197
MsG0180001785.01.T01 AT5G16770 72.650 117 32 0 1 117 1 117 2.47e-61 197
MsG0180001785.01.T01 AT5G16770 72.650 117 32 0 1 117 1 117 5.32e-61 196
MsG0180001785.01.T01 AT5G16770 72.650 117 32 0 1 117 1 117 5.32e-61 196
MsG0180001785.01.T01 AT4G28110 69.748 119 36 0 1 119 1 119 1.31e-60 194
MsG0180001785.01.T01 AT3G02940 70.940 117 34 0 1 117 1 117 2.62e-60 194
MsG0180001785.01.T01 AT3G02940 70.940 117 34 0 1 117 1 117 5.14e-60 193
MsG0180001785.01.T01 AT3G02940 70.940 117 34 0 1 117 1 117 5.14e-60 193
MsG0180001785.01.T01 AT3G01140 71.795 117 33 0 1 117 1 117 1.93e-59 192
MsG0180001785.01.T01 AT1G56160 71.053 114 33 0 3 116 5 118 4.11e-59 190
MsG0180001785.01.T01 AT2G16720 69.492 118 36 0 1 118 1 118 1.15e-58 188
MsG0180001785.01.T01 AT3G01140 70.940 117 34 0 1 117 44 160 1.69e-58 191
MsG0180001785.01.T01 AT1G35515 47.291 203 86 4 1 197 1 188 2.12e-58 186
MsG0180001785.01.T01 AT5G15310 70.940 117 34 0 1 117 1 117 2.40e-58 189
MsG0180001785.01.T01 AT3G12820 47.222 216 108 3 3 212 5 220 2.53e-58 186
MsG0180001785.01.T01 AT5G15310 70.940 117 34 0 1 117 1 117 3.65e-58 188
MsG0180001785.01.T01 AT5G15310 70.940 117 34 0 1 117 1 117 4.57e-58 186
MsG0180001785.01.T01 AT4G38620 68.644 118 37 0 1 118 1 118 1.01e-57 186
MsG0180001785.01.T01 AT1G34670 70.085 117 35 0 1 117 1 117 2.03e-57 188
MsG0180001785.01.T01 AT1G22640 64.567 127 44 1 1 127 1 126 2.06e-57 184
MsG0180001785.01.T01 AT3G13540 66.667 114 38 0 4 117 15 128 3.39e-57 184
MsG0180001785.01.T01 AT5G10280 68.376 117 37 0 1 117 1 117 5.42e-57 186
MsG0180001785.01.T01 AT4G09460 66.949 118 39 0 1 118 1 118 6.08e-57 182
MsG0180001785.01.T01 AT1G79180 49.510 204 60 5 3 170 5 201 2.07e-56 184
MsG0180001785.01.T01 AT5G65230 69.231 117 36 0 1 117 1 117 4.55e-56 183
MsG0180001785.01.T01 AT4G17785 66.102 118 39 1 1 117 1 118 1.89e-55 182
MsG0180001785.01.T01 AT4G17785 66.102 118 39 1 1 117 1 118 1.91e-55 182
MsG0180001785.01.T01 AT2G47460 66.949 118 39 0 1 118 1 118 3.58e-55 182
MsG0180001785.01.T01 AT5G62470 66.667 120 40 0 1 120 1 120 5.17e-55 181
MsG0180001785.01.T01 AT3G28910 64.754 122 43 0 1 122 1 122 8.71e-55 180
MsG0180001785.01.T01 AT4G22680 43.694 222 113 4 1 218 1 214 9.84e-55 178
MsG0180001785.01.T01 AT1G18570 67.797 118 37 1 1 117 1 118 2.08e-54 180
MsG0180001785.01.T01 AT4G34990 67.521 117 38 0 1 117 1 117 2.49e-54 177
MsG0180001785.01.T01 AT5G16600 67.241 116 38 0 1 116 1 116 2.93e-54 179
MsG0180001785.01.T01 AT4G12350 37.544 285 157 7 1 270 1 279 3.10e-54 177
MsG0180001785.01.T01 AT5G60890 65.517 116 40 0 1 116 1 116 3.78e-54 177
MsG0180001785.01.T01 AT3G62610 67.241 116 38 0 1 116 1 116 4.03e-54 179
MsG0180001785.01.T01 AT5G61420 66.667 117 39 0 1 117 1 117 5.80e-54 179
MsG0180001785.01.T01 AT5G07690 66.102 118 40 0 1 118 1 118 8.18e-54 178
MsG0180001785.01.T01 AT5G62470 66.667 120 39 1 1 120 1 119 1.31e-53 177
MsG0180001785.01.T01 AT3G47600 64.463 121 43 0 1 121 1 121 1.47e-53 177
MsG0180001785.01.T01 AT5G49330 39.130 276 119 5 1 228 1 275 2.61e-53 177
MsG0180001785.01.T01 AT1G74650 66.667 117 39 0 1 117 1 117 3.94e-53 176
MsG0180001785.01.T01 AT1G57560 56.164 146 63 1 1 146 1 145 5.19e-53 175
MsG0180001785.01.T01 AT1G74080 64.103 117 42 0 1 117 1 117 1.52e-52 174
MsG0180001785.01.T01 AT1G08810 65.517 116 40 0 1 116 1 116 3.60e-52 172
MsG0180001785.01.T01 AT1G66230 52.564 156 69 2 1 152 1 155 4.56e-52 172
MsG0180001785.01.T01 AT1G57560 63.248 117 43 0 1 117 1 117 7.81e-52 171
MsG0180001785.01.T01 AT5G07700 64.407 118 42 0 1 118 1 118 1.31e-51 172
MsG0180001785.01.T01 AT5G07700 64.407 118 42 0 1 118 1 118 1.31e-51 172
MsG0180001785.01.T01 AT5G14340 45.729 199 101 3 1 195 13 208 1.46e-51 170
MsG0180001785.01.T01 AT5G54230 71.698 106 30 0 12 117 12 117 1.85e-51 171
MsG0180001785.01.T01 AT4G01680 64.655 116 41 0 1 116 1 116 4.59e-51 168
MsG0180001785.01.T01 AT5G56110 64.655 116 41 0 1 116 1 116 1.23e-50 169
MsG0180001785.01.T01 AT4G01680 64.655 116 41 0 1 116 1 116 1.28e-50 169
MsG0180001785.01.T01 AT5G26660 63.793 116 42 0 1 116 1 116 1.37e-50 170
MsG0180001785.01.T01 AT4G37780 60.169 118 46 1 1 117 1 118 8.58e-50 166
MsG0180001785.01.T01 AT5G62320 52.817 142 57 2 3 137 4 142 1.84e-49 164
MsG0180001785.01.T01 AT1G09540 55.000 140 59 1 1 136 1 140 1.93e-49 167
MsG0180001785.01.T01 AT5G57620 61.864 118 44 1 1 117 1 118 2.01e-48 164
MsG0180001785.01.T01 AT3G13890 58.974 117 48 0 1 117 1 117 2.63e-48 164
MsG0180001785.01.T01 AT3G49690 61.345 119 45 1 1 118 1 119 7.96e-48 161
MsG0180001785.01.T01 AT3G12720 60.177 113 45 0 6 118 16 128 2.06e-47 160
MsG0180001785.01.T01 AT5G23000 42.157 204 108 4 1 199 1 199 3.68e-47 160
MsG0180001785.01.T01 AT4G01680 58.594 128 41 1 1 116 1 128 4.60e-47 160
MsG0180001785.01.T01 AT5G65790 60.504 119 46 1 1 118 1 119 5.89e-47 161
MsG0180001785.01.T01 AT1G18710 62.069 116 44 0 1 116 1 116 7.83e-47 157
MsG0180001785.01.T01 AT1G74430 56.818 132 53 1 1 128 1 132 2.08e-46 157
MsG0180001785.01.T01 AT2G36890 49.080 163 82 1 1 162 1 163 2.37e-46 157
MsG0180001785.01.T01 AT2G32460 62.037 108 41 0 8 115 14 121 2.95e-46 162
MsG0180001785.01.T01 AT5G14750 61.538 104 40 0 13 116 17 120 5.18e-46 154
MsG0180001785.01.T01 AT2G36890 49.080 163 82 1 1 162 42 204 6.31e-46 157
MsG0180001785.01.T01 AT2G32460 62.264 106 40 0 10 115 4 109 1.14e-45 160
MsG0180001785.01.T01 AT5G35550 61.947 113 43 0 12 124 14 126 1.26e-45 154
MsG0180001785.01.T01 AT5G40330 60.577 104 41 0 13 116 13 116 2.45e-45 152
MsG0180001785.01.T01 AT3G13890 54.762 126 48 1 1 117 1 126 3.58e-45 156
MsG0180001785.01.T01 AT3G23250 44.737 228 109 7 58 272 1 224 7.08e-45 151
MsG0180001785.01.T01 AT5G06100 60.000 105 42 0 11 115 31 135 1.84e-44 156
MsG0180001785.01.T01 AT3G28470 59.091 110 45 0 1 110 1 110 2.22e-44 153
MsG0180001785.01.T01 AT1G63910 56.897 116 50 0 1 116 1 116 2.33e-44 154
MsG0180001785.01.T01 AT5G40350 40.385 208 100 7 12 215 17 204 2.38e-44 149
MsG0180001785.01.T01 AT5G06100 60.000 105 42 0 11 115 31 135 6.29e-44 156
MsG0180001785.01.T01 AT5G06100 60.000 105 42 0 11 115 31 135 6.29e-44 156
MsG0180001785.01.T01 AT5G06100 60.000 105 42 0 11 115 31 135 6.29e-44 156
MsG0180001785.01.T01 AT5G06100 60.000 105 42 0 11 115 31 135 6.29e-44 156
MsG0180001785.01.T01 AT3G27920 56.364 110 48 0 8 117 10 119 1.88e-43 148
MsG0180001785.01.T01 AT5G55020 60.952 105 41 0 12 116 26 130 2.19e-43 155
MsG0180001785.01.T01 AT3G01530 44.785 163 86 1 8 166 21 183 2.76e-43 147
MsG0180001785.01.T01 AT3G11440 56.637 113 45 1 7 115 32 144 7.85e-43 152
MsG0180001785.01.T01 AT3G27810 60.000 105 42 0 12 116 20 124 1.28e-42 145
MsG0180001785.01.T01 AT5G12870 58.261 115 48 0 2 116 8 122 1.59e-42 147
MsG0180001785.01.T01 AT3G11440 56.637 113 45 1 7 115 32 144 2.83e-42 152
MsG0180001785.01.T01 AT3G11440 56.637 113 45 1 7 115 32 144 2.83e-42 152
MsG0180001785.01.T01 AT3G11440 56.637 113 45 1 7 115 32 144 2.83e-42 152
MsG0180001785.01.T01 AT1G68320 42.786 201 109 4 12 206 19 219 4.35e-42 146
MsG0180001785.01.T01 AT4G13480 51.969 127 55 1 13 139 7 127 5.62e-42 145
MsG0180001785.01.T01 AT4G25560 61.261 111 43 0 13 123 11 121 6.95e-42 145
MsG0180001785.01.T01 AT3G30210 54.032 124 50 1 11 134 26 142 9.02e-42 145
MsG0180001785.01.T01 AT3G24310 53.175 126 57 1 9 134 15 138 1.53e-41 144
MsG0180001785.01.T01 AT5G52600 50.725 138 62 1 9 140 9 146 1.94e-41 142
MsG0180001785.01.T01 AT4G26930 58.252 103 43 0 12 114 19 121 2.12e-41 147
MsG0180001785.01.T01 AT3G08500 60.185 108 43 0 9 116 27 134 2.41e-41 145
MsG0180001785.01.T01 AT1G25340 58.929 112 44 1 13 122 19 130 2.42e-41 144
MsG0180001785.01.T01 AT2G26960 57.547 106 45 0 9 114 17 122 2.59e-41 147
MsG0180001785.01.T01 AT5G52260 57.983 119 50 0 1 119 1 119 1.64e-40 141
MsG0180001785.01.T01 AT2G47190 42.945 163 80 2 8 157 16 178 5.69e-40 140
MsG0180001785.01.T01 AT1G48000 46.667 150 74 3 12 155 32 181 2.97e-39 137
MsG0180001785.01.T01 AT1G66370 34.562 217 124 4 10 217 6 213 3.25e-39 137
MsG0180001785.01.T01 AT3G48920 55.660 106 47 0 9 114 15 120 1.31e-37 134
MsG0180001785.01.T01 AT1G66380 57.547 106 45 0 10 115 6 111 1.36e-37 130
MsG0180001785.01.T01 AT3G46130 52.778 108 51 0 8 115 5 112 3.16e-37 132
MsG0180001785.01.T01 AT1G56650 57.547 106 45 0 10 115 6 111 5.06e-37 132
MsG0180001785.01.T01 AT1G25340 56.250 112 42 2 13 122 19 125 6.78e-37 132
MsG0180001785.01.T01 AT5G59780 54.369 103 47 0 13 115 9 111 8.15e-37 130
MsG0180001785.01.T01 AT1G66390 57.547 106 45 0 10 115 6 111 9.22e-37 131
MsG0180001785.01.T01 AT1G25340 56.250 112 42 2 13 122 19 125 1.24e-36 132
MsG0180001785.01.T01 AT3G06490 59.223 103 42 0 12 114 19 121 1.36e-35 130
MsG0180001785.01.T01 AT3G12820 50.000 132 64 1 47 176 1 132 2.38e-35 125
MsG0180001785.01.T01 AT5G49620 56.075 107 47 0 8 114 22 128 3.57e-35 128
MsG0180001785.01.T01 AT3G53200 54.808 104 47 0 12 115 9 112 7.67e-35 125
MsG0180001785.01.T01 AT5G14750 65.385 78 24 1 39 116 12 86 3.03e-33 119
MsG0180001785.01.T01 AT5G35550 63.953 86 31 0 39 124 44 129 8.97e-33 121
MsG0180001785.01.T01 AT5G26660 70.833 72 21 0 45 116 14 85 2.15e-32 121
MsG0180001785.01.T01 AT5G49620 49.587 121 47 1 8 114 22 142 1.64e-31 119
MsG0180001785.01.T01 AT3G60460 44.444 117 63 2 7 122 6 121 2.67e-31 118
MsG0180001785.01.T01 AT2G26950 50.000 100 50 0 9 108 13 112 2.26e-30 117
MsG0180001785.01.T01 AT5G40350 37.714 175 85 7 45 215 5 159 1.04e-29 110
MsG0180001785.01.T01 AT3G47600 64.935 77 27 0 45 121 39 115 4.55e-29 112
MsG0180001785.01.T01 AT3G27810 60.811 74 29 0 43 116 2 75 1.49e-28 107
MsG0180001785.01.T01 AT3G46130 62.500 72 27 0 44 115 9 80 8.19e-28 107
MsG0180001785.01.T01 AT2G23290 50.980 102 49 1 14 115 13 113 8.32e-28 109
MsG0180001785.01.T01 AT5G59780 63.380 71 26 0 45 115 20 90 1.45e-27 106
MsG0180001785.01.T01 AT3G46130 63.380 71 26 0 45 115 20 90 1.95e-27 106
MsG0180001785.01.T01 AT4G37260 49.020 102 51 1 14 115 13 113 2.69e-27 108
MsG0180001785.01.T01 AT3G09230 45.872 109 50 2 14 118 55 158 4.87e-27 108
MsG0180001785.01.T01 AT3G55730 42.105 152 63 4 14 145 56 202 7.45e-27 108
MsG0180001785.01.T01 AT3G09370 42.857 154 66 5 12 148 141 289 9.13e-27 109
MsG0180001785.01.T01 AT3G09370 38.000 100 60 2 14 112 91 189 4.90e-14 72.0
MsG0180001785.01.T01 AT3G09370 42.857 154 66 5 12 148 128 276 9.93e-27 108
MsG0180001785.01.T01 AT3G09370 38.000 100 60 2 14 112 78 176 5.20e-14 72.0
MsG0180001785.01.T01 AT3G09370 42.857 154 66 5 12 148 133 281 1.02e-26 108
MsG0180001785.01.T01 AT3G09370 38.000 100 60 2 14 112 83 181 4.99e-14 72.0
MsG0180001785.01.T01 AT3G50060 40.000 150 85 2 14 159 6 154 3.19e-26 104
MsG0180001785.01.T01 AT3G53200 61.972 71 27 0 45 115 9 79 3.98e-26 102
MsG0180001785.01.T01 AT5G67300 38.356 146 87 2 14 159 6 148 7.41e-26 103
MsG0180001785.01.T01 AT2G39880 49.057 106 45 2 14 115 50 150 9.60e-26 104
MsG0180001785.01.T01 AT3G27785 48.515 101 51 1 8 108 183 282 2.11e-25 104
MsG0180001785.01.T01 AT1G22640 64.286 70 24 1 58 127 1 69 2.46e-25 100
MsG0180001785.01.T01 AT5G11510 47.706 109 48 2 12 116 79 182 2.80e-25 105
MsG0180001785.01.T01 AT5G11510 37.000 100 61 2 14 112 29 127 8.10e-15 74.7
MsG0180001785.01.T01 AT5G11510 47.706 109 48 2 12 116 79 182 2.80e-25 105
MsG0180001785.01.T01 AT5G11510 37.000 100 61 2 14 112 29 127 8.10e-15 74.7
MsG0180001785.01.T01 AT5G11510 47.706 109 48 2 12 116 79 182 2.80e-25 105
MsG0180001785.01.T01 AT5G11510 37.000 100 61 2 14 112 29 127 8.10e-15 74.7
MsG0180001785.01.T01 AT5G11510 47.706 109 48 2 12 116 79 182 3.62e-25 105
MsG0180001785.01.T01 AT5G11510 37.000 100 61 2 14 112 29 127 8.46e-15 74.7
MsG0180001785.01.T01 AT5G11510 47.706 109 48 2 12 116 79 182 4.21e-25 105
MsG0180001785.01.T01 AT5G11510 37.000 100 61 2 14 112 29 127 9.54e-15 74.3
MsG0180001785.01.T01 AT5G02320 39.865 148 85 2 12 156 125 271 4.40e-25 104
MsG0180001785.01.T01 AT5G02320 35.000 100 63 2 14 112 75 173 3.03e-13 69.7
MsG0180001785.01.T01 AT5G02320 39.865 148 85 2 12 156 125 271 4.40e-25 104
MsG0180001785.01.T01 AT5G02320 35.000 100 63 2 14 112 75 173 3.03e-13 69.7
MsG0180001785.01.T01 AT5G02320 39.865 148 85 2 12 156 65 211 5.09e-25 103
MsG0180001785.01.T01 AT5G02320 35.000 100 63 2 14 112 15 113 4.28e-13 69.3
MsG0180001785.01.T01 AT1G17950 49.515 103 49 2 14 115 5 105 1.13e-24 99.8
MsG0180001785.01.T01 AT5G40360 30.928 194 107 4 8 200 152 319 1.49e-24 101
MsG0180001785.01.T01 AT4G33450 42.478 113 59 2 3 115 13 119 2.14e-24 99.0
MsG0180001785.01.T01 AT4G18770 42.342 111 59 2 8 116 211 318 2.50e-24 101
MsG0180001785.01.T01 AT1G66380 61.111 72 28 0 44 115 7 78 2.53e-24 94.7
MsG0180001785.01.T01 AT1G66380 53.012 83 39 0 10 92 6 88 5.17e-24 94.0
MsG0180001785.01.T01 AT1G18960 45.690 116 56 4 1 116 1 109 1.23e-23 97.8
MsG0180001785.01.T01 AT4G32730 43.810 105 58 1 12 116 85 188 1.76e-23 100
MsG0180001785.01.T01 AT4G32730 36.000 100 62 2 14 112 35 133 1.09e-13 71.2
MsG0180001785.01.T01 AT4G32730 43.810 105 58 1 12 116 85 188 1.76e-23 100
MsG0180001785.01.T01 AT4G32730 36.000 100 62 2 14 112 35 133 1.09e-13 71.2
MsG0180001785.01.T01 AT4G32730 43.810 105 58 1 12 116 85 188 1.76e-23 100
MsG0180001785.01.T01 AT4G32730 36.000 100 62 2 14 112 35 133 1.09e-13 71.2
MsG0180001785.01.T01 AT4G32730 43.810 105 58 1 12 116 85 188 1.76e-23 100
MsG0180001785.01.T01 AT4G32730 36.000 100 62 2 14 112 35 133 1.09e-13 71.2
MsG0180001785.01.T01 AT4G32730 43.810 105 58 1 12 116 85 188 1.84e-23 100
MsG0180001785.01.T01 AT4G32730 36.000 100 62 2 14 112 35 133 1.15e-13 71.2
MsG0180001785.01.T01 AT1G69560 30.804 224 130 6 9 230 102 302 2.93e-23 97.4
MsG0180001785.01.T01 AT1G69560 29.148 223 135 4 9 230 118 318 3.02e-23 97.4
MsG0180001785.01.T01 AT5G58850 45.455 99 53 1 10 108 101 198 7.47e-23 97.4
MsG0180001785.01.T01 AT5G14750 62.712 59 22 0 58 116 1 59 8.13e-23 91.7
MsG0180001785.01.T01 AT5G14750 62.712 59 22 0 58 116 1 59 8.13e-23 91.7
MsG0180001785.01.T01 AT1G73410 48.598 107 52 2 14 119 6 110 2.56e-22 93.2
MsG0180001785.01.T01 AT5G17800 43.137 102 57 1 14 115 93 193 3.73e-22 94.4
MsG0180001785.01.T01 AT1G26780 44.762 105 55 2 12 115 96 198 5.34e-22 93.2
MsG0180001785.01.T01 AT3G29020 39.806 103 61 1 14 116 65 166 5.42e-22 92.0
MsG0180001785.01.T01 AT1G26780 44.762 105 55 2 12 115 96 198 6.01e-22 94.4
MsG0180001785.01.T01 AT1G73410 48.148 108 53 2 14 120 6 111 7.16e-22 90.9
MsG0180001785.01.T01 AT5G11050 38.849 139 63 4 10 144 101 221 9.09e-22 94.4
MsG0180001785.01.T01 AT3G29020 39.806 103 61 1 14 116 67 168 9.84e-22 92.8
MsG0180001785.01.T01 AT1G71030 48.193 83 42 1 35 117 4 85 2.36e-21 89.4
MsG0180001785.01.T01 AT1G71030 53.731 67 31 0 51 117 5 71 3.12e-21 88.6
MsG0180001785.01.T01 AT4G00540 41.667 108 59 2 12 116 101 207 9.28e-19 85.5
MsG0180001785.01.T01 AT4G00540 34.579 107 62 2 14 112 46 152 4.14e-13 69.3
MsG0180001785.01.T01 AT5G39700 41.748 103 59 1 8 110 50 151 1.37e-18 81.6
MsG0180001785.01.T01 AT4G00540 41.667 108 59 2 12 116 99 205 1.49e-18 85.1
MsG0180001785.01.T01 AT4G00540 34.579 107 62 2 14 112 44 150 5.63e-13 68.9
MsG0180001785.01.T01 AT2G37630 39.604 101 59 1 17 115 7 107 1.62e-18 84.7
MsG0180001785.01.T01 AT1G14350 39.316 117 69 2 17 132 28 143 2.26e-17 81.6
MsG0180001785.01.T01 AT1G14350 39.316 117 69 2 17 132 28 143 2.26e-17 81.6
MsG0180001785.01.T01 AT2G25230 38.938 113 65 3 7 118 19 128 4.93e-17 78.6
MsG0180001785.01.T01 AT4G25560 66.667 51 17 0 73 123 5 55 4.46e-16 75.5
MsG0180001785.01.T01 AT2G02820 40.404 99 58 1 17 115 33 130 5.34e-16 77.0
MsG0180001785.01.T01 AT2G02820 39.394 99 59 1 17 115 33 130 6.73e-16 77.8
MsG0180001785.01.T01 AT2G02820 39.394 99 59 1 17 115 33 130 7.60e-16 77.4
MsG0180001785.01.T01 AT1G16490 36.667 150 80 6 77 224 12 148 3.63e-14 70.1
MsG0180001785.01.T01 AT5G40430 34.513 113 69 4 7 118 47 155 1.75e-13 68.9
MsG0180001785.01.T01 AT5G59780 58.696 46 19 0 70 115 1 46 3.62e-13 66.6
MsG0180001785.01.T01 AT3G46130 58.696 46 19 0 70 115 1 46 5.92e-13 66.2
MsG0180001785.01.T01 AT3G18100 35.417 96 61 1 13 108 545 639 4.49e-12 66.6
MsG0180001785.01.T01 AT3G18100 35.417 96 61 1 13 108 497 591 4.89e-12 66.2
MsG0180001785.01.T01 AT3G18100 35.417 96 61 1 13 108 384 478 6.26e-12 65.9
MsG0180001785.01.T01 AT3G18100 35.417 96 61 1 13 108 332 426 6.86e-12 65.9
MsG0180001785.01.T01 AT5G61420 70.270 37 11 0 81 117 2 38 7.31e-11 62.0
MsG0180001785.01.T01 AT1G74650 65.000 40 14 0 78 117 2 41 8.25e-11 61.2

Find 41 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATTGGGTTGGTTATTAT+TGG 0.197277 1:+26909035 None:intergenic
CATCATTATCAAAAGGGTTT+TGG 0.220517 1:+26908653 None:intergenic
ATTTCAATGAAATGATTATT+AGG 0.232313 1:+26908922 None:intergenic
CAAAAGCTTTCATCAATTTC+AGG 0.250594 1:+26908790 None:intergenic
TGAAAAGAAGGGATTGAAAA+AGG 0.278369 1:-26910224 MsG0180001785.01.T01:CDS
ATTTCATTGTCTGTTCTTCC+TGG 0.287218 1:+26909102 None:intergenic
CTGAAATTGATGAAAGCTTT+TGG 0.299877 1:-26908789 MsG0180001785.01.T01:CDS
TAATAATCATTTCATTGAAA+TGG 0.311485 1:-26908920 MsG0180001785.01.T01:CDS
TTAAAATTGTATTGTTGATC+TGG 0.320458 1:+26908694 None:intergenic
AAATTTCCTCTCTTAATATC+AGG 0.325119 1:+26909913 None:intergenic
GAACAAATACCTGCATGTTT+TGG 0.334771 1:+26910124 None:intergenic
GTCTCAATTTCAAGATGGTT+AGG 0.362882 1:-26910258 None:intergenic
TTCAGTTATAGTGCTGGAAT+TGG 0.372489 1:+26908966 None:intergenic
GAGGATTTCATCTTCCTCTA+AGG 0.392145 1:+26910192 None:intergenic
TATGACGTGTTTATCAAATC+AGG 0.415459 1:-26908613 MsG0180001785.01.T01:CDS
TGCATGAATCACTGGGGAAC+AGG 0.418688 1:-26909858 MsG0180001785.01.T01:intron
AAAGGGTCCTTGGACCTTAG+AGG 0.420566 1:-26910206 MsG0180001785.01.T01:CDS
ATTCCATCATCATTATCAAA+AGG 0.422336 1:+26908646 None:intergenic
GAAACTGTCATAGAATTTGA+AGG 0.428347 1:+26908727 None:intergenic
TGATTATTAGGACTATTAGA+AGG 0.435165 1:+26908934 None:intergenic
GGCTCCTTGTTGTGAAAAGA+AGG 0.442620 1:-26910236 MsG0180001785.01.T01:CDS
TTCCATCATCATTATCAAAA+GGG 0.450794 1:+26908647 None:intergenic
TCTCAATTTCAAGATGGTTA+GGG 0.450832 1:-26910257 None:intergenic
CATCAAGATGCATGAATCAC+TGG 0.453367 1:-26909866 MsG0180001785.01.T01:CDS
ATAAACATGGACATAGCAAT+TGG 0.459805 1:-26910156 MsG0180001785.01.T01:CDS
ATTGTCACAAATGAGTCTTC+AGG 0.502135 1:+26908814 None:intergenic
ATATGATTCAGTTATAGTGC+TGG 0.510879 1:+26908960 None:intergenic
ATGATGTAAGTCTAAAACTC+AGG 0.524939 1:+26908574 None:intergenic
TTTGCAGGTTTATTAAGATG+TGG 0.531442 1:-26909973 MsG0180001785.01.T01:intron
ATCAAGATGCATGAATCACT+GGG 0.538824 1:-26909865 MsG0180001785.01.T01:CDS
TGTCATAGAATTTGAAGGCA+TGG 0.547306 1:+26908732 None:intergenic
TCATCTTCCTCTAAGGTCCA+AGG 0.559081 1:+26910199 None:intergenic
GAAAGAGTTGTCGATTGAGA+TGG 0.564322 1:-26909951 MsG0180001785.01.T01:CDS
TTAAAACCTGATATTAAGAG+AGG 0.565110 1:-26909919 MsG0180001785.01.T01:CDS
GCAATAGCAGCAAAATTACC+AGG 0.576007 1:-26909120 MsG0180001785.01.T01:CDS
GCTCCTTGTTGTGAAAAGAA+GGG 0.589438 1:-26910235 MsG0180001785.01.T01:CDS
CGTGCCCTACCAAAACATGC+AGG 0.611878 1:-26910133 MsG0180001785.01.T01:intron
ACATCATACATCAATAAACA+TGG 0.617616 1:-26910169 MsG0180001785.01.T01:CDS
CATAGAATTTGAAGGCATGG+TGG 0.641607 1:+26908735 None:intergenic
GTTTATTGATGTATGATGTG+AGG 0.651160 1:+26910173 None:intergenic
TCAAGATGCATGAATCACTG+GGG 0.778871 1:-26909864 MsG0180001785.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAGAAAAAAAAAAC+AGG + Chr1:26909236-26909255 None:intergenic 10.0%
!!! AGATATAATATTATACTTTT+GGG - Chr1:26908784-26908803 MsG0180001785.01.T01:CDS 10.0%
!!! TAGATATAATATTATACTTT+TGG - Chr1:26908783-26908802 MsG0180001785.01.T01:CDS 10.0%
!! AAGTAGACAATTATATAAAA+AGG - Chr1:26909326-26909345 MsG0180001785.01.T01:intron 15.0%
!! ACAATGAAATAAAAAATGTA+TGG - Chr1:26909740-26909759 MsG0180001785.01.T01:intron 15.0%
!! ATTTCAATGAAATGATTATT+AGG + Chr1:26909910-26909929 None:intergenic 15.0%
!! CTTGATAAATATTACTTTAT+AGG - Chr1:26908734-26908753 MsG0180001785.01.T01:CDS 15.0%
!! TAATAATCATTTCATTGAAA+TGG - Chr1:26909909-26909928 MsG0180001785.01.T01:CDS 15.0%
!!! ATACAATTTTAATAATTCAG+TGG - Chr1:26910146-26910165 MsG0180001785.01.T01:CDS 15.0%
!! AATATTTAATTCTTGCTTTC+AGG - Chr1:26909680-26909699 MsG0180001785.01.T01:intron 20.0%
!! ATCCAAATTAAGATAATACT+AGG - Chr1:26909412-26909431 MsG0180001785.01.T01:intron 20.0%
!! TTAAAATTGTATTGTTGATC+TGG + Chr1:26910138-26910157 None:intergenic 20.0%
!!! AAATTTTACAAATGAAGAAG+AGG - Chr1:26908933-26908952 MsG0180001785.01.T01:CDS 20.0%
!!! ATTATACTTTTGGGATAATT+TGG - Chr1:26908793-26908812 MsG0180001785.01.T01:CDS 20.0%
!!! CTGTTTTTAAAACTGAATTT+GGG - Chr1:26909127-26909146 MsG0180001785.01.T01:CDS 20.0%
!!! TCTGTTTTTAAAACTGAATT+TGG - Chr1:26909126-26909145 MsG0180001785.01.T01:CDS 20.0%
!!! TGTTTTTTATAACTGCATTT+AGG - Chr1:26909196-26909215 MsG0180001785.01.T01:intron 20.0%
!!! TTGCAATAAACAACAAATTT+TGG + Chr1:26909553-26909572 None:intergenic 20.0%
! AAATTTCCTCTCTTAATATC+AGG + Chr1:26908919-26908938 None:intergenic 25.0%
! ACATCATACATCAATAAACA+TGG - Chr1:26908660-26908679 MsG0180001785.01.T01:CDS 25.0%
! ATTCCATCATCATTATCAAA+AGG + Chr1:26910186-26910205 None:intergenic 25.0%
! TGATTATTAGGACTATTAGA+AGG + Chr1:26909898-26909917 None:intergenic 25.0%
! TGCCTAGTATTATCTTAATT+TGG + Chr1:26909417-26909436 None:intergenic 25.0%
! TTAAAACCTGATATTAAGAG+AGG - Chr1:26908910-26908929 MsG0180001785.01.T01:CDS 25.0%
! TTCATCACAAGGAAAAAATT+TGG - Chr1:26909969-26909988 MsG0180001785.01.T01:CDS 25.0%
! TTCCATCATCATTATCAAAA+GGG + Chr1:26910185-26910204 None:intergenic 25.0%
!! GGTAACTACATATTTTCAAT+TGG - Chr1:26908992-26909011 MsG0180001785.01.T01:CDS 25.0%
!!! CTCTTTTTGGTATTTGAATT+GGG + Chr1:26909811-26909830 None:intergenic 25.0%
!!! TATCTTTTGTGTGTTGATTT+AGG - Chr1:26908823-26908842 MsG0180001785.01.T01:CDS 25.0%
!!! TCTCTTTTTGGTATTTGAAT+TGG + Chr1:26909812-26909831 None:intergenic 25.0%
!!! TTAGGTTTTGTAAATTTTGC+AGG - Chr1:26908841-26908860 MsG0180001785.01.T01:CDS 25.0%
!!! TTGTTTTGATACTCTCTTTT+TGG + Chr1:26909824-26909843 None:intergenic 25.0%
!!! TTTTGATAATGATGATGGAA+TGG - Chr1:26910185-26910204 MsG0180001785.01.T01:CDS 25.0%
AAGTCTTAACCTCATATAGT+AGG - Chr1:26909079-26909098 MsG0180001785.01.T01:CDS 30.0%
ACTATATGAGGTTAAGACTT+AGG + Chr1:26909079-26909098 None:intergenic 30.0%
ATAAACATGGACATAGCAAT+TGG - Chr1:26908673-26908692 MsG0180001785.01.T01:CDS 30.0%
ATATGATTCAGTTATAGTGC+TGG + Chr1:26909872-26909891 None:intergenic 30.0%
ATTTAATTCTTGCTTTCAGG+TGG - Chr1:26909683-26909702 MsG0180001785.01.T01:intron 30.0%
CAAAAGCTTTCATCAATTTC+AGG + Chr1:26910042-26910061 None:intergenic 30.0%
GAAAAGAAGGGATTGAAAAA+GGG - Chr1:26908606-26908625 MsG0180001785.01.T01:CDS 30.0%
GAAACTGTCATAGAATTTGA+AGG + Chr1:26910105-26910124 None:intergenic 30.0%
GTTTATTGATGTATGATGTG+AGG + Chr1:26908659-26908678 None:intergenic 30.0%
TATGACGTGTTTATCAAATC+AGG - Chr1:26910216-26910235 MsG0180001785.01.T01:CDS 30.0%
TGAAAAGAAGGGATTGAAAA+AGG - Chr1:26908605-26908624 MsG0180001785.01.T01:CDS 30.0%
TTTGCAGGTTTATTAAGATG+TGG - Chr1:26908856-26908875 MsG0180001785.01.T01:CDS 30.0%
! AGGACTACAAATTCTGAAAA+AGG + Chr1:26909059-26909078 None:intergenic 30.0%
! CATCATTATCAAAAGGGTTT+TGG + Chr1:26910179-26910198 None:intergenic 30.0%
! CTGAAATTGATGAAAGCTTT+TGG - Chr1:26910040-26910059 MsG0180001785.01.T01:intron 30.0%
! TCTAGTGATTTTTCATCACA+AGG - Chr1:26909958-26909977 MsG0180001785.01.T01:CDS 30.0%
! TTTTGGTATTTGAATTGGGT+TGG + Chr1:26909807-26909826 None:intergenic 30.0%
!! TGAATTGGGTTGGTTATTAT+TGG + Chr1:26909797-26909816 None:intergenic 30.0%
!!! AACCCTTTTGATAATGATGA+TGG - Chr1:26910180-26910199 MsG0180001785.01.T01:CDS 30.0%
!!! ATGATGATGGAATGGATTTT+TGG - Chr1:26910193-26910212 MsG0180001785.01.T01:CDS 30.0%
!!! CAAATTTTGGTTGCATTGAT+TGG + Chr1:26909540-26909559 None:intergenic 30.0%
ATCAAGATGCATGAATCACT+GGG - Chr1:26908964-26908983 MsG0180001785.01.T01:CDS 35.0%
ATTGTCACAAATGAGTCTTC+AGG + Chr1:26910018-26910037 None:intergenic 35.0%
ATTTCATTGTCTGTTCTTCC+TGG + Chr1:26909730-26909749 None:intergenic 35.0%
TGTCATAGAATTTGAAGGCA+TGG + Chr1:26910100-26910119 None:intergenic 35.0%
! AATCCCTTCTTTTCACAACA+AGG + Chr1:26908600-26908619 None:intergenic 35.0%
! GAACAAATACCTGCATGTTT+TGG + Chr1:26908708-26908727 None:intergenic 35.0%
! TTCAGTTATAGTGCTGGAAT+TGG + Chr1:26909866-26909885 None:intergenic 35.0%
!!! AAATACCTGCATGTTTTGGT+AGG + Chr1:26908704-26908723 None:intergenic 35.0%
!!! AATACCTGCATGTTTTGGTA+GGG + Chr1:26908703-26908722 None:intergenic 35.0%
AGCTAGCATCCTACTATATG+AGG + Chr1:26909091-26909110 None:intergenic 40.0%
CATCAAGATGCATGAATCAC+TGG - Chr1:26908963-26908982 MsG0180001785.01.T01:CDS 40.0%
GAGGATTTCATCTTCCTCTA+AGG + Chr1:26908640-26908659 None:intergenic 40.0%
GCAATAGCAGCAAAATTACC+AGG - Chr1:26909709-26909728 MsG0180001785.01.T01:intron 40.0%
GCATAGTGCTATGTATGTCA+AGG + Chr1:26909510-26909529 None:intergenic 40.0%
TCAAGATGCATGAATCACTG+GGG - Chr1:26908965-26908984 MsG0180001785.01.T01:CDS 40.0%
! CATAGAATTTGAAGGCATGG+TGG + Chr1:26910097-26910116 None:intergenic 40.0%
! GAAAGAGTTGTCGATTGAGA+TGG - Chr1:26908878-26908897 MsG0180001785.01.T01:CDS 40.0%
! GCTCCTTGTTGTGAAAAGAA+GGG - Chr1:26908594-26908613 MsG0180001785.01.T01:CDS 40.0%
AGGGATTGAAAAAGGGTCCT+TGG - Chr1:26908613-26908632 MsG0180001785.01.T01:CDS 45.0%
! GGCTCCTTGTTGTGAAAAGA+AGG - Chr1:26908593-26908612 MsG0180001785.01.T01:CDS 45.0%
!! TCATCTTCCTCTAAGGTCCA+AGG + Chr1:26908633-26908652 None:intergenic 45.0%
!!! AATTATACAATTATTTTTTT+AGG - Chr1:26909463-26909482 MsG0180001785.01.T01:intron 5.0%
AAAGGGTCCTTGGACCTTAG+AGG - Chr1:26908623-26908642 MsG0180001785.01.T01:CDS 50.0%
TGCATGAATCACTGGGGAAC+AGG - Chr1:26908971-26908990 MsG0180001785.01.T01:CDS 50.0%
CGTGCCCTACCAAAACATGC+AGG - Chr1:26908696-26908715 MsG0180001785.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr1 gene 26908585 26910266 26908585 ID=MsG0180001785.01;Name=MsG0180001785.01
Chr1 mRNA 26908585 26910266 26908585 ID=MsG0180001785.01.T01;Parent=MsG0180001785.01;Name=MsG0180001785.01.T01;_AED=0.30;_eAED=0.31;_QI=0|0|0|1|1|1|3|0|275
Chr1 exon 26910134 26910266 26910134 ID=MsG0180001785.01.T01:exon:34996;Parent=MsG0180001785.01.T01
Chr1 exon 26909859 26909988 26909859 ID=MsG0180001785.01.T01:exon:34997;Parent=MsG0180001785.01.T01
Chr1 exon 26908585 26909149 26908585 ID=MsG0180001785.01.T01:exon:34998;Parent=MsG0180001785.01.T01
Chr1 CDS 26910134 26910266 26910134 ID=MsG0180001785.01.T01:cds;Parent=MsG0180001785.01.T01
Chr1 CDS 26909859 26909988 26909859 ID=MsG0180001785.01.T01:cds;Parent=MsG0180001785.01.T01
Chr1 CDS 26908585 26909149 26908585 ID=MsG0180001785.01.T01:cds;Parent=MsG0180001785.01.T01
Gene Sequence

>MsG0180001785.01.T01

ATGGTTAGGGCTCCTTGTTGTGAAAAGAAGGGATTGAAAAAGGGTCCTTGGACCTTAGAGGAAGATGAAATCCTCACATCATACATCAATAAACATGGACATAGCAATTGGCGTGCCCTACCAAAACATGCAGGTTTATTAAGATGTGGAAAGAGTTGTCGATTGAGATGGATTAACTATTTAAAACCTGATATTAAGAGAGGAAATTTTACAAATGAAGAAGAGGAAACTATCATCAAGATGCATGAATCACTGGGGAACAGGTGGTCAGCAATAGCAGCAAAATTACCAGGAAGAACAGACAATGAAATAAAAAATGTATGGCACACTCACTTGAAGAAAAGACTATTGAATACCAATAATAACCAACCCAATTCAAATACCAAAAAGAGAGTATCAAAACAAAAAATCAAAAGATCTGATTCCAATTCCAGCACTATAACTGAATCATATGAACCTTCTAATAGTCCTAATAATCATTTCATTGAAATGGAAACTACATCATCAAATTGCACATTTTCTAGTGATTTTTCATCACAAGGAAAAAATTTGGACAATAGCATCATTTGTGAAGAGCCTGAAGACTCATTTGTGACAATGCCTGAAATTGATGAAAGCTTTTGGTCAGAGACAGTAATTGATGATGAAATTAGTTCCACCATGCCTTCAAATTCTATGACAGTTTCAAATGATTTACCAGATCAACAATACAATTTTAATAATTCAGTGGAAAATTTCCAAAACCCTTTTGATAATGATGATGGAATGGATTTTTGGTATGACGTGTTTATCAAATCAGGAGAATCAACAGATTTGCCTGAGTTTTAG

Protein sequence

>MsG0180001785.01.T01

MVRAPCCEKKGLKKGPWTLEEDEILTSYINKHGHSNWRALPKHAGLLRCGKSCRLRWINYLKPDIKRGNFTNEEEETIIKMHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLLNTNNNQPNSNTKKRVSKQKIKRSDSNSSTITESYEPSNSPNNHFIEMETTSSNCTFSSDFSSQGKNLDNSIICEEPEDSFVTMPEIDESFWSETVIDDEISSTMPSNSMTVSNDLPDQQYNFNNSVENFQNPFDNDDGMDFWYDVFIKSGESTDLPEF*