AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003448.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003448.01.T01 MTR_1g061970 92.025 489 16 2 1 466 1 489 0.0 910
MsG0180003448.01.T01 MTR_4g049910 75.792 442 88 4 37 466 14 448 0.0 666
MsG0180003448.01.T01 MTR_0427s0010 63.596 228 57 2 239 466 22 223 2.97e-90 275
MsG0180003448.01.T01 MTR_2g039960 35.878 393 202 12 79 449 41 405 1.79e-64 215
MsG0180003448.01.T01 MTR_4g125970 34.988 403 214 11 70 449 28 405 1.33e-63 213
MsG0180003448.01.T01 MTR_4g125970 34.988 403 214 11 70 449 45 422 2.95e-63 212
MsG0180003448.01.T01 MTR_2g438110 33.933 389 215 8 79 449 34 398 3.53e-63 211
MsG0180003448.01.T01 MTR_2g099620 35.036 411 217 12 63 449 5 389 1.40e-62 209
MsG0180003448.01.T01 MTR_2g099620 35.550 391 206 11 79 449 41 405 1.45e-62 210
MsG0180003448.01.T01 MTR_8g018400 34.615 390 211 10 79 449 41 405 5.92e-62 208
MsG0180003448.01.T01 MTR_7g076820 33.410 437 229 14 45 449 106 512 1.11e-59 205
MsG0180003448.01.T01 MTR_7g076800 33.333 450 234 15 22 449 98 503 2.41e-58 201
MsG0180003448.01.T01 MTR_7g076830 34.414 401 211 12 71 449 135 505 3.65e-58 201
MsG0180003448.01.T01 MTR_4g010565 29.095 409 222 11 77 452 122 495 6.76e-46 167
MsG0180003448.01.T01 MTR_1g012420 29.219 397 237 9 77 452 45 418 3.79e-44 161
MsG0180003448.01.T01 MTR_3g107420 28.501 407 227 11 77 452 45 418 5.14e-44 161
MsG0180003448.01.T01 MTR_6g082080 30.886 395 219 13 79 448 10 375 1.14e-37 144
MsG0180003448.01.T01 MTR_7g109720 28.610 374 219 11 79 427 232 582 7.56e-37 145
MsG0180003448.01.T01 MTR_7g056830 30.127 395 222 13 79 448 10 375 1.03e-36 141
MsG0180003448.01.T01 MTR_5g027840 29.974 387 216 9 64 420 89 450 3.85e-36 141
MsG0180003448.01.T01 MTR_2g100230 30.084 359 193 12 99 427 115 445 2.23e-35 138
MsG0180003448.01.T01 MTR_2g007000 31.956 363 187 13 99 429 523 857 4.58e-35 140
MsG0180003448.01.T01 MTR_4g114120 28.900 391 196 13 80 420 141 499 1.33e-34 138
MsG0180003448.01.T01 MTR_3g083690 28.736 435 223 14 42 424 110 509 4.59e-34 136
MsG0180003448.01.T01 MTR_1g095810 28.606 416 214 14 80 452 146 521 7.16e-34 135
MsG0180003448.01.T01 MTR_7g100820 27.488 422 252 12 26 420 76 470 1.18e-33 135
MsG0180003448.01.T01 MTR_2g032630 27.232 448 248 17 67 476 483 890 1.34e-33 136
MsG0180003448.01.T01 MTR_1g054630 28.736 435 226 13 39 424 118 517 1.94e-33 134
MsG0180003448.01.T01 MTR_1g026830 28.365 416 215 14 80 452 148 523 5.81e-33 132
MsG0180003448.01.T01 MTR_6g005550 26.222 450 253 16 70 476 156 569 9.75e-33 132
MsG0180003448.01.T01 MTR_4g105100 27.346 373 222 10 79 426 202 550 1.26e-32 132
MsG0180003448.01.T01 MTR_0915s0010 31.419 296 166 10 92 365 2 282 1.97e-32 125
MsG0180003448.01.T01 MTR_1g046570 28.676 408 207 17 99 449 10 390 8.81e-32 126
MsG0180003448.01.T01 MTR_2g066050 29.517 393 231 10 57 426 31 400 1.05e-31 128
MsG0180003448.01.T01 MTR_8g018370 29.096 354 190 11 116 449 4 316 1.16e-31 124
MsG0180003448.01.T01 MTR_4g079320 29.708 377 210 13 80 429 20 368 1.81e-31 129
MsG0180003448.01.T01 MTR_3g449250 26.546 388 214 12 107 455 110 465 7.41e-30 123
MsG0180003448.01.T01 MTR_3g449250 26.546 388 214 12 107 455 110 465 8.74e-30 123
MsG0180003448.01.T01 MTR_3g467550 27.089 395 230 13 79 440 117 486 1.05e-29 122
MsG0180003448.01.T01 MTR_2g041140 28.288 403 228 12 76 447 138 510 5.01e-29 121
MsG0180003448.01.T01 MTR_8g027775 27.368 475 244 19 14 420 16 457 5.70e-29 120
MsG0180003448.01.T01 MTR_3g467550 27.083 432 248 15 49 440 51 455 9.45e-29 119
MsG0180003448.01.T01 MTR_3g049990 28.070 399 233 11 76 447 149 520 1.55e-28 120
MsG0180003448.01.T01 MTR_6g056080 29.008 393 206 10 96 449 119 477 1.73e-28 120
MsG0180003448.01.T01 MTR_4g134170 28.426 394 211 12 79 427 287 654 4.66e-28 119
MsG0180003448.01.T01 MTR_5g090120 25.946 370 210 9 119 455 118 456 7.53e-28 117
MsG0180003448.01.T01 MTR_1g102410 27.670 412 209 10 105 461 69 446 5.89e-27 115
MsG0180003448.01.T01 MTR_8g027770 28.030 396 227 13 61 420 183 556 1.62e-26 114
MsG0180003448.01.T01 MTR_6g005320 28.061 392 213 12 79 427 249 614 2.06e-26 113
MsG0180003448.01.T01 MTR_8g027780 29.219 397 208 17 66 420 96 461 1.39e-25 110
MsG0180003448.01.T01 MTR_3g467550 26.979 341 206 11 79 386 117 447 5.45e-25 107
MsG0180003448.01.T01 MTR_8g097000 26.897 435 214 16 76 457 285 668 9.42e-24 105
MsG0180003448.01.T01 MTR_4g068990 26.000 450 273 16 26 439 13 438 1.84e-23 104
MsG0180003448.01.T01 MTR_6g033070 25.876 371 220 10 79 420 140 484 4.94e-23 102
MsG0180003448.01.T01 MTR_4g105100 26.061 330 209 9 79 383 202 521 1.05e-22 101
MsG0180003448.01.T01 MTR_5g092560 25.526 380 229 11 74 420 63 421 1.02e-20 96.3
MsG0180003448.01.T01 MTR_4g112340 26.566 399 228 14 95 460 112 478 1.56e-20 95.5
MsG0180003448.01.T01 MTR_2g055850 26.478 423 244 15 76 471 88 470 5.13e-20 93.6
MsG0180003448.01.T01 MTR_1g083130 24.228 421 217 14 79 426 26 417 7.17e-20 93.2
MsG0180003448.01.T01 MTR_6g039840 25.558 403 232 14 79 440 110 485 1.79e-18 89.4
MsG0180003448.01.T01 MTR_5g069330 23.469 392 242 12 79 443 7 367 6.88e-17 83.2
MsG0180003448.01.T01 MTR_5g069330 23.469 392 242 12 79 443 3 363 7.41e-17 83.2
MsG0180003448.01.T01 MTR_3g071620 24.311 399 217 16 76 420 11 378 6.27e-16 80.9
MsG0180003448.01.T01 MTR_3g107420 28.986 207 103 6 77 253 45 237 1.61e-15 77.8
MsG0180003448.01.T01 MTR_4g131750 25.441 397 211 18 75 415 75 442 4.17e-15 78.2
MsG0180003448.01.T01 MTR_8g042690 24.033 362 208 13 95 420 33 363 1.57e-13 73.2
MsG0180003448.01.T01 MTR_3g118120 24.658 438 239 17 48 430 110 511 1.80e-13 73.2
MsG0180003448.01.T01 MTR_8g032230 33.758 157 91 6 79 230 10 158 6.09e-13 67.4
MsG0180003448.01.T01 MTR_2g063080 29.940 167 93 6 279 442 380 525 8.22e-12 67.8
MsG0180003448.01.T01 MTR_2g063080 28.796 191 104 7 71 239 102 282 5.40e-11 65.5
MsG0180003448.01.T01 MTR_8g018330 29.545 176 98 7 279 449 15 169 5.20e-11 62.0
MsG0180003448.01.T01 MTR_8g018350 30.508 177 94 7 279 449 15 168 6.60e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003448.01.T01 AT3G53110 59.959 487 152 8 7 469 29 496 0.0 560
MsG0180003448.01.T01 AT1G72730 34.458 415 221 12 61 449 17 406 1.61e-65 218
MsG0180003448.01.T01 AT3G19760 33.741 409 224 10 60 449 20 400 2.58e-63 212
MsG0180003448.01.T01 AT3G13920 34.615 390 211 10 79 449 30 394 7.05e-62 208
MsG0180003448.01.T01 AT3G13920 34.615 390 211 10 79 449 40 404 7.31e-62 208
MsG0180003448.01.T01 AT4G00660 34.086 443 230 14 39 449 82 494 1.46e-60 207
MsG0180003448.01.T01 AT4G00660 34.086 443 230 14 39 449 82 494 1.46e-60 207
MsG0180003448.01.T01 AT3G13920 34.359 390 207 10 79 449 40 399 3.04e-60 204
MsG0180003448.01.T01 AT3G61240 33.477 463 241 15 9 449 70 487 3.26e-60 206
MsG0180003448.01.T01 AT3G61240 33.477 463 241 15 9 449 70 487 3.26e-60 206
MsG0180003448.01.T01 AT1G54270 34.359 390 212 10 79 449 40 404 5.53e-60 203
MsG0180003448.01.T01 AT3G13920 35.013 377 201 10 79 436 40 391 4.65e-59 201
MsG0180003448.01.T01 AT3G13920 35.013 377 201 10 79 436 44 395 5.94e-59 201
MsG0180003448.01.T01 AT1G54270 34.103 390 208 10 79 449 40 399 1.69e-58 199
MsG0180003448.01.T01 AT2G45810 33.484 442 240 13 30 449 108 517 2.98e-58 202
MsG0180003448.01.T01 AT1G51380 32.084 427 230 12 42 449 2 387 3.48e-56 192
MsG0180003448.01.T01 AT5G11170 29.017 417 251 10 57 452 26 418 4.26e-45 164
MsG0180003448.01.T01 AT5G11200 29.017 417 251 10 57 452 26 418 4.26e-45 164
MsG0180003448.01.T01 AT5G11200 26.974 456 251 11 57 452 26 459 1.32e-39 150
MsG0180003448.01.T01 AT5G11170 28.329 353 214 6 120 452 2 335 5.84e-39 145
MsG0180003448.01.T01 AT5G11200 26.539 471 252 11 57 452 26 477 2.94e-38 146
MsG0180003448.01.T01 AT2G42520 29.227 414 207 13 63 424 144 523 1.21e-36 144
MsG0180003448.01.T01 AT2G42520 29.227 414 207 13 63 424 144 523 1.21e-36 144
MsG0180003448.01.T01 AT2G42520 29.227 414 207 13 63 424 144 523 1.21e-36 144
MsG0180003448.01.T01 AT5G14610 29.358 436 247 17 29 440 124 522 2.74e-36 143
MsG0180003448.01.T01 AT5G14610 29.399 449 254 18 18 440 111 522 3.06e-36 142
MsG0180003448.01.T01 AT5G14610 29.399 449 254 18 18 440 119 530 3.97e-36 142
MsG0180003448.01.T01 AT3G01540 26.824 466 275 16 1 440 94 519 7.39e-36 141
MsG0180003448.01.T01 AT3G01540 26.824 466 275 16 1 440 94 519 7.39e-36 141
MsG0180003448.01.T01 AT3G01540 26.824 466 275 16 1 440 94 519 7.39e-36 141
MsG0180003448.01.T01 AT3G01540 26.824 466 275 16 1 440 94 519 7.55e-36 141
MsG0180003448.01.T01 AT1G20920 29.665 418 229 14 96 474 208 599 7.59e-36 142
MsG0180003448.01.T01 AT3G22310 27.512 418 232 13 82 464 120 501 1.99e-35 140
MsG0180003448.01.T01 AT3G22310 27.512 418 232 13 82 464 120 501 2.24e-35 140
MsG0180003448.01.T01 AT5G63120 28.418 373 216 12 80 426 167 514 4.83e-35 139
MsG0180003448.01.T01 AT1G20920 29.736 417 228 14 97 474 547 937 6.14e-35 140
MsG0180003448.01.T01 AT1G20920 29.736 417 228 14 97 474 547 937 6.14e-35 140
MsG0180003448.01.T01 AT1G20920 29.736 417 228 14 97 474 547 937 6.14e-35 140
MsG0180003448.01.T01 AT1G20920 29.736 417 228 14 97 474 547 937 6.14e-35 140
MsG0180003448.01.T01 AT1G20920 29.736 417 228 14 97 474 547 937 6.14e-35 140
MsG0180003448.01.T01 AT1G20920 29.736 417 228 14 97 474 547 937 6.14e-35 140
MsG0180003448.01.T01 AT1G31970 29.337 392 213 10 64 420 102 464 7.36e-35 137
MsG0180003448.01.T01 AT3G06480 29.592 392 223 12 68 433 425 789 1.07e-34 139
MsG0180003448.01.T01 AT3G58570 28.606 409 206 14 68 424 136 510 1.30e-34 138
MsG0180003448.01.T01 AT5G60990 30.123 405 219 13 79 448 10 385 4.77e-34 134
MsG0180003448.01.T01 AT5G51280 29.442 394 198 14 101 452 168 523 7.98e-34 135
MsG0180003448.01.T01 AT4G33370 29.517 393 197 13 102 452 120 474 8.78e-34 134
MsG0180003448.01.T01 AT3G09720 29.178 353 203 9 89 420 152 478 1.19e-33 134
MsG0180003448.01.T01 AT3G09720 29.178 353 203 9 89 420 152 478 1.19e-33 134
MsG0180003448.01.T01 AT3G22330 26.379 417 236 13 82 463 108 488 1.50e-33 134
MsG0180003448.01.T01 AT1G16280 31.159 414 232 13 75 460 55 443 2.77e-33 132
MsG0180003448.01.T01 AT1G77030 28.457 376 216 12 80 429 30 378 4.02e-33 134
MsG0180003448.01.T01 AT5G14610 29.508 366 210 13 99 440 249 590 1.24e-32 132
MsG0180003448.01.T01 AT2G47330 27.005 374 225 11 79 427 229 579 1.47e-32 132
MsG0180003448.01.T01 AT5G14610 29.508 366 210 13 99 440 50 391 2.09e-32 130
MsG0180003448.01.T01 AT5G14610 29.508 366 210 13 99 440 50 391 2.09e-32 130
MsG0180003448.01.T01 AT3G58510 27.833 406 210 14 68 424 142 513 7.50e-32 129
MsG0180003448.01.T01 AT3G58510 27.833 406 210 14 68 424 142 513 7.50e-32 129
MsG0180003448.01.T01 AT3G58510 27.833 406 210 14 68 424 142 513 7.50e-32 129
MsG0180003448.01.T01 AT5G26742 27.371 369 212 10 119 456 140 483 2.03e-31 129
MsG0180003448.01.T01 AT5G26742 27.371 369 212 10 119 456 140 483 2.03e-31 129
MsG0180003448.01.T01 AT1G55150 27.249 378 219 11 99 446 119 470 2.03e-31 127
MsG0180003448.01.T01 AT1G55150 27.346 373 219 10 99 443 144 492 4.05e-31 126
MsG0180003448.01.T01 AT5G26742 27.371 369 212 10 119 456 47 390 4.07e-31 127
MsG0180003448.01.T01 AT1G28180 31.503 346 181 12 114 429 6 325 4.05e-30 121
MsG0180003448.01.T01 AT5G08620 28.180 401 214 16 64 420 66 436 9.92e-30 123
MsG0180003448.01.T01 AT2G33730 28.861 395 208 13 79 427 314 681 1.53e-29 123
MsG0180003448.01.T01 AT3G09620 28.111 434 217 16 80 474 398 775 6.89e-28 118
MsG0180003448.01.T01 AT3G09620 28.111 434 217 16 80 474 399 776 7.15e-28 118
MsG0180003448.01.T01 AT5G62190 28.954 373 202 11 105 443 122 465 1.36e-27 117
MsG0180003448.01.T01 AT5G14610 28.645 391 231 16 29 395 132 498 2.38e-27 115
MsG0180003448.01.T01 AT4G16630 27.750 400 231 11 77 447 166 536 4.53e-27 115
MsG0180003448.01.T01 AT3G18600 27.430 463 269 14 19 450 28 454 2.84e-26 112
MsG0180003448.01.T01 AT5G54910 26.442 416 243 16 59 439 47 434 3.27e-26 113
MsG0180003448.01.T01 AT1G51380 29.333 300 167 9 42 322 2 275 6.51e-26 107
MsG0180003448.01.T01 AT5G08610 28.061 392 206 16 74 420 378 738 7.46e-26 112
MsG0180003448.01.T01 AT3G06480 28.402 338 210 9 67 381 424 752 9.85e-26 112
MsG0180003448.01.T01 AT5G63630 27.344 384 219 11 74 420 50 410 3.71e-25 109
MsG0180003448.01.T01 AT5G63630 27.344 384 219 11 74 420 244 604 4.38e-25 109
MsG0180003448.01.T01 AT5G63120 27.586 319 194 11 80 372 167 474 5.54e-25 108
MsG0180003448.01.T01 AT5G63120 27.586 319 194 11 80 372 167 474 6.15e-25 108
MsG0180003448.01.T01 AT5G63120 27.586 319 194 11 80 372 167 474 6.15e-25 108
MsG0180003448.01.T01 AT5G63120 27.586 319 194 11 80 372 167 474 6.15e-25 108
MsG0180003448.01.T01 AT5G65900 27.321 377 221 13 72 420 148 499 6.79e-24 105
MsG0180003448.01.T01 AT3G02065 27.851 377 218 11 79 426 111 462 1.50e-23 104
MsG0180003448.01.T01 AT3G02065 27.851 377 218 11 79 426 111 462 1.50e-23 104
MsG0180003448.01.T01 AT4G09730 26.952 397 232 16 80 440 114 488 5.35e-20 94.0
MsG0180003448.01.T01 AT1G63250 27.436 390 222 15 76 427 326 692 6.43e-20 94.0
MsG0180003448.01.T01 AT3G02065 28.097 331 187 9 119 420 11 319 1.04e-19 91.3
MsG0180003448.01.T01 AT2G07750 26.515 396 216 15 76 426 373 738 4.70e-19 91.3
MsG0180003448.01.T01 AT1G51380 31.188 202 116 6 42 242 2 181 2.42e-18 86.3
MsG0180003448.01.T01 AT4G34910 24.697 413 205 13 79 415 47 429 2.54e-18 88.6
MsG0180003448.01.T01 AT1G51380 31.188 202 116 6 42 242 2 181 3.28e-18 85.9
MsG0180003448.01.T01 AT1G12770 30.366 191 97 6 72 239 104 281 5.71e-13 71.6
MsG0180003448.01.T01 AT1G12770 28.485 165 100 4 279 443 381 527 6.73e-12 68.2
MsG0180003448.01.T01 AT1G12770 30.366 191 97 6 72 239 104 281 5.71e-13 71.6
MsG0180003448.01.T01 AT1G12770 28.485 165 100 4 279 443 381 527 6.73e-12 68.2

Find 133 sgRNAs with CRISPR-Local

Find 532 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATTGTTTAGGTTAATT+TGG 0.187218 1:+62410745 MsG0180003448.01.T01:intron
GTTGGTAGGGCTGGGCGATT+TGG 0.187734 1:+62410857 MsG0180003448.01.T01:CDS
TACTAGAGAGTTGGCTATTC+AGG 0.211357 1:+62406074 MsG0180003448.01.T01:CDS
GGCTTGATCGGCCCAGCTTT+TGG 0.211747 1:-62405539 None:intergenic
AAAGCACTTTCAAATCTTAA+AGG 0.220948 1:-62405350 None:intergenic
AAAGATTATATATTTGAAAT+AGG 0.235592 1:+62410419 MsG0180003448.01.T01:CDS
TTTGGCTTCAATGTTTATTA+TGG 0.240624 1:+62412293 MsG0180003448.01.T01:CDS
TTGCACAGGGTTGGTAGGGC+TGG 0.257464 1:+62410848 MsG0180003448.01.T01:CDS
ATTTGAAGCTCCGGTGGGTT+AGG 0.264819 1:-62405472 None:intergenic
CATAATCAGGCTCTTGTTCT+TGG 0.272275 1:-62410817 None:intergenic
TACAAGGGTTGTTGGGAAAA+AGG 0.274239 1:+62410295 MsG0180003448.01.T01:CDS
ACACCATGGATTCTTTAAAT+AGG 0.290423 1:-62412378 None:intergenic
CATCCCTTTCACCACATATC+AGG 0.299190 1:-62411894 None:intergenic
CACAAAGCTCTTGTTGATTT+AGG 0.301798 1:+62410500 MsG0180003448.01.T01:CDS
ATTCAATTCCGCCATCAAAA+AGG 0.310135 1:+62407027 MsG0180003448.01.T01:CDS
ATAACAACCTGCGCCATAAT+AGG 0.316481 1:-62407053 None:intergenic
TTGGTAGGGCTGGGCGATTT+GGG 0.326658 1:+62410858 MsG0180003448.01.T01:CDS
ATTATGGCGCAGGTTGTTAT+TGG 0.328812 1:+62407056 MsG0180003448.01.T01:CDS
CGCTGTAATGTTGGTGTCGT+CGG 0.335543 1:-62405677 None:intergenic
TTAATCTTGGGATGCTTAGT+AGG 0.349931 1:+62406007 MsG0180003448.01.T01:CDS
GCTTGAGGAGCTTGCAGATT+GGG 0.351974 1:-62406036 None:intergenic
AAGCACTTTCAAATCTTAAA+GGG 0.354637 1:-62405349 None:intergenic
GGCGGAGGTGGAGGTTTGAT+TGG 0.363101 1:-62405572 None:intergenic
GCTCCGGTGGGTTAGGGTTA+CGG 0.364056 1:-62405465 None:intergenic
GGTTTCGTCGGCGGCGGAGG+TGG 0.370257 1:-62405584 None:intergenic
GTCGGGATCATCTAGAGATT+TGG 0.370263 1:-62405659 None:intergenic
GCTCAAGCACATAATGGTTC+AGG 0.376544 1:+62405970 MsG0180003448.01.T01:CDS
TGCAAATACACCTCATAATC+AGG 0.379608 1:-62410830 None:intergenic
AGAGGTTTCGTCGGCGGCGG+AGG 0.385106 1:-62405587 None:intergenic
TTGAGGAGTGTTCGCGACTT+GGG 0.403009 1:-62405396 None:intergenic
TGCACAGGGTTGGTAGGGCT+GGG 0.404676 1:+62410849 MsG0180003448.01.T01:CDS
TGGCAGTGGAGGAGAGGTGG+TGG 0.404758 1:-62405515 None:intergenic
TTCGTCGGCGGCGGAGGTGG+AGG 0.405769 1:-62405581 None:intergenic
TCAAATGTGCGTACAAACTT+TGG 0.409420 1:+62412350 MsG0180003448.01.T01:CDS
CTCCACTGCCATCCAAAAGC+TGG 0.412253 1:+62405527 MsG0180003448.01.T01:CDS
CTCAGAATGTGCAGTTCCTA+TGG 0.418718 1:+62406995 MsG0180003448.01.T01:CDS
TTGATAGCTCAAGCACATAA+TGG 0.420456 1:+62405964 MsG0180003448.01.T01:CDS
CAGGTTGTTATTGGTACTCC+TGG 0.424362 1:+62407065 MsG0180003448.01.T01:CDS
GGCTGGGCGATTTGGGCGCA+AGG 0.424800 1:+62410865 MsG0180003448.01.T01:CDS
ATCAAATTCTTAATTGTGCC+AGG 0.425276 1:-62407083 None:intergenic
GTTGAGGAGTGTTCGCGACT+TGG 0.426686 1:-62405397 None:intergenic
GCTGTAATGTTGGTGTCGTC+GGG 0.427170 1:-62405676 None:intergenic
CCGTGGCTTTGATCAGCAAC+AGG 0.433702 1:+62410634 MsG0180003448.01.T01:CDS
CAGGCTCTTGTTCTTGGCCA+CGG 0.435431 1:-62410811 None:intergenic
AAAGTTGCTCTTAAAGAAGC+TGG 0.440458 1:+62412123 MsG0180003448.01.T01:CDS
TTTGAAGCTCCGGTGGGTTA+GGG 0.442904 1:-62405471 None:intergenic
GGTTTCTTCGTCGGCTTGAT+CGG 0.446945 1:-62405551 None:intergenic
TGTATTTGCACAGGGTTGGT+AGG 0.446992 1:+62410843 MsG0180003448.01.T01:CDS
TTGATTACTTATAAGAAACT+TGG 0.451832 1:+62407101 MsG0180003448.01.T01:CDS
ATGGTCAAGAGCACCTTGTA+TGG 0.458366 1:-62410537 None:intergenic
GGATGGCAGTGGAGGAGAGG+TGG 0.468980 1:-62405518 None:intergenic
GGTTTGATTGGTTTCTTCGT+CGG 0.469217 1:-62405560 None:intergenic
CATTGAGGTTCTCCGTAAGA+TGG 0.469249 1:+62406953 MsG0180003448.01.T01:CDS
TCAATCTTAGCAAGCTCGTC+AGG 0.469456 1:-62410389 None:intergenic
GTATTTGCACAGGGTTGGTA+GGG 0.470296 1:+62410844 MsG0180003448.01.T01:CDS
TTCATTGACGTTGAGGGAAG+AGG 0.471693 1:-62405605 None:intergenic
GGAAGAGGTTTCGTCGGCGG+CGG 0.471697 1:-62405590 None:intergenic
TGAATAGCCAACTCTCTAGT+AGG 0.472110 1:-62406072 None:intergenic
AGGCTCTTGTTCTTGGCCAC+GGG 0.481618 1:-62410810 None:intergenic
AATTTGGTGCAGGTTACAGC+TGG 0.481748 1:+62405790 MsG0180003448.01.T01:intron
ATCGTCAAAGAGTTCAAAGA+TGG 0.487343 1:+62410575 MsG0180003448.01.T01:CDS
TGAGGAGTGTTCGCGACTTG+GGG 0.491404 1:-62405395 None:intergenic
ATTGAGGTTCTCCGTAAGAT+GGG 0.491851 1:+62406954 MsG0180003448.01.T01:CDS
TAATCTTGGGATGCTTAGTA+GGG 0.492378 1:+62406008 MsG0180003448.01.T01:CDS
CCGTGTACTTCCCCATCTTA+CGG 0.493677 1:-62406965 None:intergenic
AACGTCGTGGCGGATGTGTA+AGG 0.494039 1:-62405820 None:intergenic
ATTATGAGGTGTATTTGCAC+AGG 0.499481 1:+62410834 MsG0180003448.01.T01:CDS
ATGTGGAGGATTAAGAATCA+TGG 0.501190 1:-62405935 None:intergenic
TCCACTGCCATCCAAAAGCT+GGG 0.503491 1:+62405528 MsG0180003448.01.T01:CDS
CGTAAGATGGGGAAGTACAC+GGG 0.512273 1:+62406966 MsG0180003448.01.T01:CDS
TCTTGTTGATTTAGGCTATG+AGG 0.514061 1:+62410508 MsG0180003448.01.T01:CDS
GATTCTTAATCCTCCACATA+GGG 0.514959 1:+62405939 MsG0180003448.01.T01:CDS
AGCTTGAGGAGCTTGCAGAT+TGG 0.515271 1:-62406037 None:intergenic
GGTTAATTCATTGACGTTGA+GGG 0.525067 1:-62405611 None:intergenic
TATAATCCCTTCAAAAGCTC+CGG 0.526079 1:-62405862 None:intergenic
GATCATCTAGAGATTTGGAA+TGG 0.526531 1:-62405654 None:intergenic
GTTCAAAGATGGTTTGACTC+AGG 0.527101 1:+62410586 MsG0180003448.01.T01:CDS
ATCATCTAGAGATTTGGAAT+GGG 0.527480 1:-62405653 None:intergenic
AGAACAAGAGCCTGATTATG+AGG 0.530550 1:+62410820 MsG0180003448.01.T01:CDS
TGGGTTAGGGTTACGGAGGA+AGG 0.531351 1:-62405458 None:intergenic
TAACCTGATATGTGGTGAAA+GGG 0.534784 1:+62411891 MsG0180003448.01.T01:CDS
TATGAGGTCACTTCCATACA+AGG 0.536146 1:+62410524 MsG0180003448.01.T01:CDS
GTGGAGATTTGAAGCTCCGG+TGG 0.536266 1:-62405478 None:intergenic
ATTTGAAATAGGAGAGAATG+TGG 0.540066 1:+62410430 MsG0180003448.01.T01:CDS
TATTTGTCCTACTAGAGAGT+TGG 0.540350 1:+62406065 MsG0180003448.01.T01:CDS
TTAACCTGATATGTGGTGAA+AGG 0.547238 1:+62411890 MsG0180003448.01.T01:CDS
TGATTCTTAATCCTCCACAT+AGG 0.547639 1:+62405938 MsG0180003448.01.T01:CDS
CCGTAAGATGGGGAAGTACA+CGG 0.548975 1:+62406965 MsG0180003448.01.T01:CDS
CGATCTTGTCTCTATCATCA+TGG 0.553290 1:-62410556 None:intergenic
TAGCCTATTTAAAGAATCCA+TGG 0.554512 1:+62412375 MsG0180003448.01.T01:CDS
TGTGGAGGATTAAGAATCAT+GGG 0.556922 1:-62405934 None:intergenic
TGGTTAATTCATTGACGTTG+AGG 0.557741 1:-62405612 None:intergenic
GAGGGAAGAGGTTTCGTCGG+CGG 0.558959 1:-62405593 None:intergenic
GTGCAGTTCCTATGGACAGA+AGG 0.559745 1:+62407003 MsG0180003448.01.T01:CDS
ATTGAATCCCTTCTGTCCAT+AGG 0.561511 1:-62407011 None:intergenic
GGACAAATACATAGAGCTTG+AGG 0.569078 1:-62406051 None:intergenic
AGTGGAGGAGAGGTGGTGGA+AGG 0.578866 1:-62405511 None:intergenic
GAGGTGTATTTGCACAGGGT+TGG 0.581567 1:+62410839 MsG0180003448.01.T01:CDS
CCTGTTGCTGATCAAAGCCA+CGG 0.583710 1:-62410634 None:intergenic
TTTGGATGGCAGTGGAGGAG+AGG 0.584058 1:-62405521 None:intergenic
TTTGAAATAGGAGAGAATGT+GGG 0.584556 1:+62410431 MsG0180003448.01.T01:CDS
TAGGGTTACGGAGGAAGGAG+AGG 0.586912 1:-62405453 None:intergenic
AAGGGCGCCTATTATGGCGC+AGG 0.587444 1:+62407046 MsG0180003448.01.T01:CDS
TGCAGTTCCTATGGACAGAA+GGG 0.587722 1:+62407004 MsG0180003448.01.T01:CDS
ATGGTGGAGATTTGAAGCTC+CGG 0.587929 1:-62405481 None:intergenic
TCGACCGATGTTCTTGCCCG+TGG 0.593684 1:+62410617 MsG0180003448.01.T01:CDS
GCTGGGCGATTTGGGCGCAA+GGG 0.595158 1:+62410866 MsG0180003448.01.T01:CDS
TTGAAATAGGAGAGAATGTG+GGG 0.596292 1:+62410432 MsG0180003448.01.T01:CDS
GTTGAGGGAAGAGGTTTCGT+CGG 0.598306 1:-62405596 None:intergenic
CTGTAATACTGTTACTGTTG+AGG 0.601586 1:-62405413 None:intergenic
CCTCCGTAACCCTAACCCAC+CGG 0.604350 1:+62405462 MsG0180003448.01.T01:five_prime_UTR
CTGTTGCTGATCAAAGCCAC+GGG 0.620873 1:-62410633 None:intergenic
ATGACGAACCGCTGTAATGT+TGG 0.631036 1:-62405686 None:intergenic
TACTCAGCAGAGTACTTCAG+TGG 0.636769 1:-62410785 None:intergenic
TGAGCTATCAAATCCCTATG+TGG 0.642603 1:-62405952 None:intergenic
AAAGCCACGGGCAAGAACAT+CGG 0.646797 1:-62410621 None:intergenic
GCTGTATTTAACCTGATATG+TGG 0.649135 1:+62411883 MsG0180003448.01.T01:CDS
TTATGAGGTGTATTTGCACA+GGG 0.652424 1:+62410835 MsG0180003448.01.T01:CDS
GGCGGATCAAATGCTTGCTG+AGG 0.654171 1:+62407157 MsG0180003448.01.T01:CDS
CGAAGAGCTATCACTCTCGC+CGG 0.657122 1:+62405843 MsG0180003448.01.T01:CDS
TTGAGGTTCTCCGTAAGATG+GGG 0.657518 1:+62406955 MsG0180003448.01.T01:CDS
GCTATCAAATCCCTATGTGG+AGG 0.660049 1:-62405949 None:intergenic
TGGAGATTTGAAGCTCCGGT+GGG 0.662425 1:-62405477 None:intergenic
TGATAGCTCTTCGAACGTCG+TGG 0.663969 1:-62405833 None:intergenic
GGTGGTGGAAGGTTCTGACA+TGG 0.670699 1:-62405500 None:intergenic
GGTGGAAGGTTCTGACATGG+TGG 0.673074 1:-62405497 None:intergenic
TACTCTGCTGAGTACACCCG+TGG 0.681522 1:+62410794 MsG0180003448.01.T01:CDS
GAGGAGTGTTCGCGACTTGG+GGG 0.692546 1:-62405394 None:intergenic
TAGCTCTTCGAACGTCGTGG+CGG 0.696604 1:-62405830 None:intergenic
GTAAGATGGGGAAGTACACG+GGG 0.699517 1:+62406967 MsG0180003448.01.T01:CDS
AGGGATTAAATAGAACACCA+TGG 0.708543 1:-62412392 None:intergenic
CCGGTGGGTTAGGGTTACGG+AGG 0.718773 1:-62405462 None:intergenic
CGACGACACCAACATTACAG+CGG 0.774689 1:+62405678 MsG0180003448.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGTAAAAAAATAGATTTA+GGG + Chr1:62406623-62406642 MsG0180003448.01.T01:intron 10.0%
!!! AAAGATTATATATTTGAAAT+AGG + Chr1:62410419-62410438 MsG0180003448.01.T01:CDS 10.0%
!!! TTTTGTAAAAAAATAGATTT+AGG + Chr1:62406622-62406641 MsG0180003448.01.T01:intron 10.0%
!! AATTAAATCAAACCAAATAA+AGG - Chr1:62406853-62406872 None:intergenic 15.0%
!! AGCTATTTATATAATAGATT+AGG + Chr1:62406149-62406168 MsG0180003448.01.T01:intron 15.0%
!! ATGCAGAATTATTATTATTT+AGG + Chr1:62409316-62409335 MsG0180003448.01.T01:intron 15.0%
!! CAAAAAATATGAAAAGAAAA+TGG - Chr1:62409930-62409949 None:intergenic 15.0%
!! CTATTTATATAATAGATTAG+GGG + Chr1:62406151-62406170 MsG0180003448.01.T01:intron 15.0%
!! CTCTTACAATTATAATATAT+GGG - Chr1:62411070-62411089 None:intergenic 15.0%
!! GCTATTTATATAATAGATTA+GGG + Chr1:62406150-62406169 MsG0180003448.01.T01:intron 15.0%
!! TAAATTGTAGTAATGAATAT+TGG - Chr1:62408669-62408688 None:intergenic 15.0%
!! TACAAATAGAAATATTATGT+TGG + Chr1:62406378-62406397 MsG0180003448.01.T01:intron 15.0%
!! TATTCAAATATTCCTTTATT+TGG + Chr1:62406838-62406857 MsG0180003448.01.T01:intron 15.0%
!! TATTTATATAATAGATTAGG+GGG + Chr1:62406152-62406171 MsG0180003448.01.T01:intron 15.0%
!! TTAATTAATGAAAGATAGAA+TGG - Chr1:62407223-62407242 None:intergenic 15.0%
!! TTTAGAAAATGCTAAAATAT+AGG - Chr1:62411757-62411776 None:intergenic 15.0%
!!! ATTTTTCACAAATTATAGAA+AGG - Chr1:62408521-62408540 None:intergenic 15.0%
!!! CAAAAAAATTGTTTTTGTTT+TGG + Chr1:62408841-62408860 MsG0180003448.01.T01:intron 15.0%
!!! CAAAACAAAAACAATTTTTT+TGG - Chr1:62408843-62408862 None:intergenic 15.0%
!!! CATTTTTTTGCTTTAAAATA+GGG + Chr1:62406274-62406293 MsG0180003448.01.T01:intron 15.0%
!!! TCATTTTTTTGCTTTAAAAT+AGG + Chr1:62406273-62406292 MsG0180003448.01.T01:intron 15.0%
!!! TCTATTTTTTTACAAAAACA+AGG - Chr1:62406619-62406638 None:intergenic 15.0%
!!! TTGATTTAATTTGATTATTC+TGG + Chr1:62406862-62406881 MsG0180003448.01.T01:intron 15.0%
!!! TTTTTCACAAATTATAGAAA+GGG - Chr1:62408520-62408539 None:intergenic 15.0%
!! AAAAAAAAAAAGGTGGTAAT+AGG + Chr1:62409799-62409818 MsG0180003448.01.T01:intron 20.0%
!! AAACAAATGTAAGAAAAACT+TGG - Chr1:62411846-62411865 None:intergenic 20.0%
!! AATATTTAAAGATTCCACAT+TGG + Chr1:62411459-62411478 MsG0180003448.01.T01:intron 20.0%
!! AATGTGAGATATGTAATATT+TGG - Chr1:62411025-62411044 None:intergenic 20.0%
!! AGAAATATTATGTTGGAAAA+TGG + Chr1:62406385-62406404 MsG0180003448.01.T01:intron 20.0%
!! AGATAGATTAGAGAAATAAT+AGG - Chr1:62411186-62411205 None:intergenic 20.0%
!! AGATTTAGAAATTAAAGAGT+TGG - Chr1:62408410-62408429 None:intergenic 20.0%
!! ATGCATGAAAAAAAAAAGAA+AGG - Chr1:62410718-62410737 None:intergenic 20.0%
!! CAAAAACAAAATATGAGATT+AGG + Chr1:62408703-62408722 MsG0180003448.01.T01:intron 20.0%
!! CAAAATTAGTATGTTTGTAT+TGG - Chr1:62406458-62406477 None:intergenic 20.0%
!! CAAACATTAATGAATTGAAA+AGG - Chr1:62407525-62407544 None:intergenic 20.0%
!! CATTTCAAAAAAAAAAAAGG+TGG + Chr1:62409792-62409811 MsG0180003448.01.T01:intron 20.0%
!! GCTCTTACAATTATAATATA+TGG - Chr1:62411071-62411090 None:intergenic 20.0%
!! TACTCTATCATTATAAGATT+TGG + Chr1:62411500-62411519 MsG0180003448.01.T01:intron 20.0%
!! TCTTGTAATTATTCTCATTT+AGG + Chr1:62411391-62411410 MsG0180003448.01.T01:intron 20.0%
!! TTGATTACTTATAAGAAACT+TGG + Chr1:62407101-62407120 MsG0180003448.01.T01:CDS 20.0%
!! TTGTTTCATTTGATTGAATA+GGG + Chr1:62411860-62411879 MsG0180003448.01.T01:intron 20.0%
!! TTTGTTTCATTTGATTGAAT+AGG + Chr1:62411859-62411878 MsG0180003448.01.T01:intron 20.0%
!!! AAAACTACTTGTTTTAATCT+TGG + Chr1:62405994-62406013 MsG0180003448.01.T01:CDS 20.0%
!!! AAACTACTTGTTTTAATCTT+GGG + Chr1:62405995-62406014 MsG0180003448.01.T01:CDS 20.0%
!!! AGACATATTGTTTTCATATA+TGG + Chr1:62406724-62406743 MsG0180003448.01.T01:intron 20.0%
!!! ATTTTTTTACAAAAACAAGG+AGG - Chr1:62406616-62406635 None:intergenic 20.0%
!!! CAAAAAAATGATTTTCGTTT+TGG - Chr1:62406264-62406283 None:intergenic 20.0%
!!! CAATACAAACATACTAATTT+TGG + Chr1:62406456-62406475 MsG0180003448.01.T01:intron 20.0%
!!! CACCTTTTTTTTTTTTGAAA+TGG - Chr1:62409794-62409813 None:intergenic 20.0%
!!! CTTTGATGAATTATTTTACA+TGG + Chr1:62412235-62412254 MsG0180003448.01.T01:intron 20.0%
!!! TAAACTTTTTCATGCTAAAT+AGG + Chr1:62407180-62407199 MsG0180003448.01.T01:intron 20.0%
!!! TAAACTTTTTGAAAGTCAAA+AGG + Chr1:62406423-62406442 MsG0180003448.01.T01:intron 20.0%
!!! TCAAAGATTGAAAAACATTT+TGG + Chr1:62411928-62411947 MsG0180003448.01.T01:CDS 20.0%
!!! TGCCATTTCAAAAAAAAAAA+AGG + Chr1:62409789-62409808 MsG0180003448.01.T01:intron 20.0%
!!! TTAATATCTATAAAAGCACT+TGG - Chr1:62407801-62407820 None:intergenic 20.0%
!!! TTCACTAAGAATTTTTTGAT+TGG + Chr1:62410210-62410229 MsG0180003448.01.T01:intron 20.0%
!!! TTCCTAATTGTTATCTTTTA+AGG + Chr1:62409896-62409915 MsG0180003448.01.T01:intron 20.0%
!!! TTCTTTTTTTATCAGTTTAC+CGG + Chr1:62409851-62409870 MsG0180003448.01.T01:intron 20.0%
! AAAATATAACCTGAACAAAG+AGG + Chr1:62406691-62406710 MsG0180003448.01.T01:intron 25.0%
! AAACTTCGAAGTAAATATAC+AGG + Chr1:62407928-62407947 MsG0180003448.01.T01:intron 25.0%
! AAGCACTTTCAAATCTTAAA+GGG - Chr1:62405352-62405371 None:intergenic 25.0%
! AATAACACCATCAAAAGATT+TGG - Chr1:62411105-62411124 None:intergenic 25.0%
! AATTAACCTAAACAATGCAA+TGG - Chr1:62410745-62410764 None:intergenic 25.0%
! ACTACAATTTACATTCAAGA+AGG + Chr1:62408678-62408697 MsG0180003448.01.T01:intron 25.0%
! ATAACACCATCAAAAGATTT+GGG - Chr1:62411104-62411123 None:intergenic 25.0%
! ATATAGAGATAGGATATTAG+TGG - Chr1:62408818-62408837 None:intergenic 25.0%
! ATTGAAACTGAATTTCACTT+AGG + Chr1:62405760-62405779 MsG0180003448.01.T01:intron 25.0%
! CTAGACAAAGTGTATAAATA+TGG + Chr1:62411267-62411286 MsG0180003448.01.T01:intron 25.0%
! CTCCTTAAAAGATAACAATT+AGG - Chr1:62409901-62409920 None:intergenic 25.0%
! GAGTAAAATTTAGACATCAA+TGG - Chr1:62411608-62411627 None:intergenic 25.0%
! GCAAGAAACTAAACAAATAT+TGG + Chr1:62408910-62408929 MsG0180003448.01.T01:intron 25.0%
! TAAAAAAAAAGTCTTTCCCT+TGG + Chr1:62408970-62408989 MsG0180003448.01.T01:intron 25.0%
! TACAGTTATTAAGCAAATGA+AGG - Chr1:62408068-62408087 None:intergenic 25.0%
! TCCTGCTAAAAATAAAGAAA+AGG - Chr1:62408023-62408042 None:intergenic 25.0%
! TGAAACAGCTTAAAACTTAT+TGG + Chr1:62407694-62407713 MsG0180003448.01.T01:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG - Chr1:62408378-62408397 None:intergenic 25.0%
! TGTTTCATTTGATTGAATAG+GGG + Chr1:62411861-62411880 MsG0180003448.01.T01:intron 25.0%
! TTAGGATTTGGAGATTTATT+GGG + Chr1:62409657-62409676 MsG0180003448.01.T01:intron 25.0%
! TTCTCGTATAATAAGATGAA+TGG - Chr1:62408569-62408588 None:intergenic 25.0%
! TTGAAACTGAATTTCACTTA+GGG + Chr1:62405761-62405780 MsG0180003448.01.T01:intron 25.0%
!! AAAGCACTTTCAAATCTTAA+AGG - Chr1:62405353-62405372 None:intergenic 25.0%
!! AATCATTTTGTTAATGTCAC+TGG + Chr1:62412067-62412086 MsG0180003448.01.T01:intron 25.0%
!! ACATACTAGGATATAGTTTT+TGG + Chr1:62407951-62407970 MsG0180003448.01.T01:intron 25.0%
!! CTTATAATGATAGAGTACTT+TGG - Chr1:62411497-62411516 None:intergenic 25.0%
!! GTCTTTTAGCATGTATAATT+CGG + Chr1:62409627-62409646 MsG0180003448.01.T01:intron 25.0%
!! TTGCATTGTTTAGGTTAATT+TGG + Chr1:62410745-62410764 MsG0180003448.01.T01:intron 25.0%
!! TTTAGGATTTGGAGATTTAT+TGG + Chr1:62409656-62409675 MsG0180003448.01.T01:intron 25.0%
!! TTTCAAGCTTTTTGTATATG+TGG + Chr1:62411213-62411232 MsG0180003448.01.T01:intron 25.0%
!! TTTGAATCTCTAAAAGTTGA+AGG + Chr1:62412154-62412173 MsG0180003448.01.T01:intron 25.0%
!! TTTGGCTTCAATGTTTATTA+TGG + Chr1:62412293-62412312 MsG0180003448.01.T01:CDS 25.0%
!!! AAATTGTTTTTGTTTTGGCA+AGG + Chr1:62408846-62408865 MsG0180003448.01.T01:intron 25.0%
!!! ATAAGAGTATTAGAACCAAA+TGG - Chr1:62407593-62407612 None:intergenic 25.0%
!!! ATGTTTTTCAATCTTTGACA+AGG - Chr1:62411926-62411945 None:intergenic 25.0%
!!! ATTTGGTTCTAATACTCTTA+TGG + Chr1:62407592-62407611 MsG0180003448.01.T01:intron 25.0%
!!! CAGTTTCAATTTTGAAATTC+TGG - Chr1:62405750-62405769 None:intergenic 25.0%
!!! TCCTTTTCTTTATTTTTAGC+AGG + Chr1:62408019-62408038 MsG0180003448.01.T01:intron 25.0%
!!! TCTTTATTTTTAGCAGGATT+TGG + Chr1:62408025-62408044 MsG0180003448.01.T01:intron 25.0%
!!! TGTTTCAGCTTTGAAAAAAA+TGG + Chr1:62406315-62406334 MsG0180003448.01.T01:intron 25.0%
!!! TTCGAAGTTTTTGATTAACT+TGG - Chr1:62407918-62407937 None:intergenic 25.0%
!!! TTTTATATGTAGTTCTAGCT+AGG + Chr1:62407884-62407903 MsG0180003448.01.T01:intron 25.0%
!!! TTTTTTGGACATATAGAGAT+AGG - Chr1:62408828-62408847 None:intergenic 25.0%
AAAAAAAAGGTGGTAATAGG+CGG + Chr1:62409802-62409821 MsG0180003448.01.T01:intron 30.0%
AAATAACGTGCATAACTTAC+TGG - Chr1:62411805-62411824 None:intergenic 30.0%
AAATAGGAAAATACAACCAG+AGG - Chr1:62409995-62410014 None:intergenic 30.0%
AATAACGTGCATAACTTACT+GGG - Chr1:62411804-62411823 None:intergenic 30.0%
AATAAGATGAAAACCACATG+TGG + Chr1:62406748-62406767 MsG0180003448.01.T01:intron 30.0%
AATCCATGGTGTTCTATTTA+AGG + Chr1:62412389-62412408 MsG0180003448.01.T01:CDS 30.0%
ACACCATGGATTCTTTAAAT+AGG - Chr1:62412381-62412400 None:intergenic 30.0%
ACTTTACAACCAATGAAACA+TGG - Chr1:62411153-62411172 None:intergenic 30.0%
AGAATTAGTTATACCCTGAT+TGG + Chr1:62407251-62407270 MsG0180003448.01.T01:intron 30.0%
ATCAAATTCTTAATTGTGCC+AGG - Chr1:62407086-62407105 None:intergenic 30.0%
ATCTATTCAATAACCCAATC+AGG - Chr1:62407268-62407287 None:intergenic 30.0%
CAACACAACAAATAACAATC+AGG - Chr1:62406918-62406937 None:intergenic 30.0%
CACGTCGTCATTTAAAAATT+AGG - Chr1:62408435-62408454 None:intergenic 30.0%
CGTATAATAAGATGAATGGA+TGG - Chr1:62408565-62408584 None:intergenic 30.0%
CTACCATAAACTTGCATAAT+GGG - Chr1:62409117-62409136 None:intergenic 30.0%
GAATTAGTTATACCCTGATT+GGG + Chr1:62407252-62407271 MsG0180003448.01.T01:intron 30.0%
GACACAATAAAAGAAAGAGA+AGG + Chr1:62408744-62408763 MsG0180003448.01.T01:intron 30.0%
GCAAGAATTTCTTGTATGAA+AGG - Chr1:62408221-62408240 None:intergenic 30.0%
GCTATTAGAATTAATGTTGC+TGG - Chr1:62408892-62408911 None:intergenic 30.0%
GTAAATATACAGGACATACT+AGG + Chr1:62407938-62407957 MsG0180003448.01.T01:intron 30.0%
TAAACTTACTCAGTACCATT+TGG + Chr1:62407575-62407594 MsG0180003448.01.T01:intron 30.0%
TAAAGAGTTGGACAGAAATA+TGG - Chr1:62408398-62408417 None:intergenic 30.0%
TAACACCATCAAAAGATTTG+GGG - Chr1:62411103-62411122 None:intergenic 30.0%
TAGCCTATTTAAAGAATCCA+TGG + Chr1:62412375-62412394 MsG0180003448.01.T01:CDS 30.0%
TAGGAAAACAAGATCAAACA+AGG - Chr1:62409882-62409901 None:intergenic 30.0%
TAGGATTTGGAGATTTATTG+GGG + Chr1:62409658-62409677 MsG0180003448.01.T01:intron 30.0%
TATAATATATGGGAAGAGCA+TGG - Chr1:62411060-62411079 None:intergenic 30.0%
TATTGATAGAAACCCAAGAA+CGG - Chr1:62411443-62411462 None:intergenic 30.0%
TCACTTAGGGTTTATGAATT+TGG + Chr1:62405774-62405793 MsG0180003448.01.T01:intron 30.0%
TCTATTCAATAACCCAATCA+GGG - Chr1:62407267-62407286 None:intergenic 30.0%
TGCATAGATTTAATCTGAAC+AGG + Chr1:62408238-62408257 MsG0180003448.01.T01:intron 30.0%
TGCTGTAATCAAAGAAATTC+AGG - Chr1:62412202-62412221 None:intergenic 30.0%
TGTATAAATATGGTTGTGTC+TGG + Chr1:62411277-62411296 MsG0180003448.01.T01:intron 30.0%
TTCAACTAGATATATGGCTA+GGG + Chr1:62411666-62411685 MsG0180003448.01.T01:intron 30.0%
TTCAGCATAATGCAGAAAAT+TGG + Chr1:62412012-62412031 MsG0180003448.01.T01:intron 30.0%
! ATCATCTAGAGATTTGGAAT+GGG - Chr1:62405656-62405675 None:intergenic 30.0%
! ATTGGTGATTGGTTATTTGT+TGG + Chr1:62407712-62407731 MsG0180003448.01.T01:intron 30.0%
! ATTTGAAATAGGAGAGAATG+TGG + Chr1:62410430-62410449 MsG0180003448.01.T01:CDS 30.0%
! ATTTTATACTATCCCGTTCT+TGG + Chr1:62411427-62411446 MsG0180003448.01.T01:intron 30.0%
! ATTTTCTGCATTATGCTGAA+TGG - Chr1:62412012-62412031 None:intergenic 30.0%
! CTGGTTGTATTTTCCTATTT+CGG + Chr1:62409995-62410014 MsG0180003448.01.T01:intron 30.0%
! GCTTAAAACTTATTGGTGAT+TGG + Chr1:62407701-62407720 MsG0180003448.01.T01:intron 30.0%
! GTATAATTCGGCATCATTTT+AGG + Chr1:62409639-62409658 MsG0180003448.01.T01:intron 30.0%
! TCTAATACTCTTATGGACTA+TGG + Chr1:62407599-62407618 MsG0180003448.01.T01:intron 30.0%
! TGAACTTTTTGTGAAGAAAG+AGG + Chr1:62410325-62410344 MsG0180003448.01.T01:CDS 30.0%
! TGTCAAGAATTTTGCTACAA+GGG + Chr1:62410280-62410299 MsG0180003448.01.T01:CDS 30.0%
! TTAGCGTACCTCTTTTATAT+AGG - Chr1:62411956-62411975 None:intergenic 30.0%
! TTCATTGGTTGTAAAGTAGA+TGG + Chr1:62411156-62411175 MsG0180003448.01.T01:intron 30.0%
! TTGGTGATTGGTTATTTGTT+GGG + Chr1:62407713-62407732 MsG0180003448.01.T01:intron 30.0%
! TTTGAAATAGGAGAGAATGT+GGG + Chr1:62410431-62410450 MsG0180003448.01.T01:CDS 30.0%
! TTTTATACTATCCCGTTCTT+GGG + Chr1:62411428-62411447 MsG0180003448.01.T01:intron 30.0%
! TTTTGGCACCTATATAAAAG+AGG + Chr1:62411945-62411964 MsG0180003448.01.T01:CDS 30.0%
! TTTTGTGTGTTAGAACATTG+AGG + Chr1:62406938-62406957 MsG0180003448.01.T01:intron 30.0%
!! ACGCTAATTGATAATGTACT+TGG + Chr1:62411969-62411988 MsG0180003448.01.T01:intron 30.0%
!! AGAAAAAACGGACTACAAAA+AGG - Chr1:62409718-62409737 None:intergenic 30.0%
!! GTTTTAAGCTGTTTCATAAG+TGG - Chr1:62407690-62407709 None:intergenic 30.0%
!! TTTGTTCTTTAAGCCTTGTT+TGG + Chr1:62406109-62406128 MsG0180003448.01.T01:intron 30.0%
!!! AGGATATAGTTTTTGGTTCA+GGG + Chr1:62407958-62407977 MsG0180003448.01.T01:intron 30.0%
!!! TAGGATATAGTTTTTGGTTC+AGG + Chr1:62407957-62407976 MsG0180003448.01.T01:intron 30.0%
!!! TTTTAAGGTGGTAATAGGTT+CGG + Chr1:62409376-62409395 MsG0180003448.01.T01:intron 30.0%
AAAGTTGCTCTTAAAGAAGC+TGG + Chr1:62412123-62412142 MsG0180003448.01.T01:CDS 35.0%
AAATGCTAAAGAATGCCCTT+GGG + Chr1:62406339-62406358 MsG0180003448.01.T01:intron 35.0%
AACCTAAACAATGCAATGGA+AGG - Chr1:62410741-62410760 None:intergenic 35.0%
AAGATCAAACAAGGTAATGC+CGG - Chr1:62409873-62409892 None:intergenic 35.0%
ACAAAACCATAAGTGCACAA+AGG - Chr1:62409456-62409475 None:intergenic 35.0%
ACCCACTTCAACTAGATATA+TGG + Chr1:62411660-62411679 MsG0180003448.01.T01:intron 35.0%
ACGAGATATGGAATAATAGC+AGG + Chr1:62409240-62409259 MsG0180003448.01.T01:intron 35.0%
ACTTGAGAACAAGATGAAAC+TGG + Chr1:62409072-62409091 MsG0180003448.01.T01:intron 35.0%
AGAACAAGATGAAACTGGTT+GGG + Chr1:62409077-62409096 MsG0180003448.01.T01:intron 35.0%
AGAGAAGGATACATGAAAGA+AGG + Chr1:62408759-62408778 MsG0180003448.01.T01:intron 35.0%
AGCCATATATCTAGTTGAAG+TGG - Chr1:62411665-62411684 None:intergenic 35.0%
AGTTTATGATTGCCATCCAT+TGG + Chr1:62408457-62408476 MsG0180003448.01.T01:intron 35.0%
ATAACGTGCATAACTTACTG+GGG - Chr1:62411803-62411822 None:intergenic 35.0%
ATCCTTCCATTGCATTGTTT+AGG + Chr1:62410736-62410755 MsG0180003448.01.T01:intron 35.0%
ATCGTCAAAGAGTTCAAAGA+TGG + Chr1:62410575-62410594 MsG0180003448.01.T01:CDS 35.0%
ATGCAAGTTTATGGTAGGAA+GGG + Chr1:62409120-62409139 MsG0180003448.01.T01:intron 35.0%
ATGTGGAGGATTAAGAATCA+TGG - Chr1:62405938-62405957 None:intergenic 35.0%
ATTATGAGGTGTATTTGCAC+AGG + Chr1:62410834-62410853 MsG0180003448.01.T01:CDS 35.0%
ATTCAATTCCGCCATCAAAA+AGG + Chr1:62407027-62407046 MsG0180003448.01.T01:CDS 35.0%
ATTGAAGACGAGATAATGCA+AGG - Chr1:62409763-62409782 None:intergenic 35.0%
ATTGATAGAAACCCAAGAAC+GGG - Chr1:62411442-62411461 None:intergenic 35.0%
ATTTCTGTTAGGAACCTTGT+GGG + Chr1:62411305-62411324 MsG0180003448.01.T01:intron 35.0%
CAGATCATGAAAATACATGG+GGG + Chr1:62409011-62409030 MsG0180003448.01.T01:intron 35.0%
CATTTCACTGTATCCAAACA+AGG - Chr1:62406125-62406144 None:intergenic 35.0%
CCAGATCATGAAAATACATG+GGG + Chr1:62409010-62409029 MsG0180003448.01.T01:intron 35.0%
CCATTATGCAAGTTTATGGT+AGG + Chr1:62409115-62409134 MsG0180003448.01.T01:intron 35.0%
CCTACCATAAACTTGCATAA+TGG - Chr1:62409118-62409137 None:intergenic 35.0%
CGAGCAATTGAGTTATCATT+CGG + Chr1:62407311-62407330 MsG0180003448.01.T01:intron 35.0%
CTCTATTGCTAATAACCACA+CGG - Chr1:62409427-62409446 None:intergenic 35.0%
CTGTAATACTGTTACTGTTG+AGG - Chr1:62405416-62405435 None:intergenic 35.0%
CTTCAACTAGATATATGGCT+AGG + Chr1:62411665-62411684 MsG0180003448.01.T01:intron 35.0%
GAAATTGAAAGGAAGAAGAG+AGG - Chr1:62405718-62405737 None:intergenic 35.0%
GAATGCGCAAAACATCATTT+GGG - Chr1:62408631-62408650 None:intergenic 35.0%
GAGAAGGATACATGAAAGAA+GGG + Chr1:62408760-62408779 MsG0180003448.01.T01:intron 35.0%
GATCATCTAGAGATTTGGAA+TGG - Chr1:62405657-62405676 None:intergenic 35.0%
GATTCTTAATCCTCCACATA+GGG + Chr1:62405939-62405958 MsG0180003448.01.T01:CDS 35.0%
GCCAGATCATGAAAATACAT+GGG + Chr1:62409009-62409028 MsG0180003448.01.T01:intron 35.0%
GCCATATATCTAGTTGAAGT+GGG - Chr1:62411664-62411683 None:intergenic 35.0%
GCTGTATTTAACCTGATATG+TGG + Chr1:62411883-62411902 MsG0180003448.01.T01:CDS 35.0%
GGTTAATTCATTGACGTTGA+GGG - Chr1:62405614-62405633 None:intergenic 35.0%
GTAACAGAAAATTGATCCTC+TGG + Chr1:62409976-62409995 MsG0180003448.01.T01:intron 35.0%
GTTAGGCATAAATTCCAACA+TGG + Chr1:62411549-62411568 MsG0180003448.01.T01:intron 35.0%
GTTTATGATATGTCCACATG+TGG - Chr1:62406764-62406783 None:intergenic 35.0%
GTTTATGATTGCCATCCATT+GGG + Chr1:62408458-62408477 MsG0180003448.01.T01:intron 35.0%
TAAATGCTAAAGAATGCCCT+TGG + Chr1:62406338-62406357 MsG0180003448.01.T01:intron 35.0%
TAACCTGATATGTGGTGAAA+GGG + Chr1:62411891-62411910 MsG0180003448.01.T01:CDS 35.0%
TAATCTTGGGATGCTTAGTA+GGG + Chr1:62406008-62406027 MsG0180003448.01.T01:CDS 35.0%
TAGGCCAAAGAAAATACCAA+AGG - Chr1:62411738-62411757 None:intergenic 35.0%
TATAATCCCTTCAAAAGCTC+CGG - Chr1:62405865-62405884 None:intergenic 35.0%
TATGCAAGTTTATGGTAGGA+AGG + Chr1:62409119-62409138 MsG0180003448.01.T01:intron 35.0%
TATTTGTCCTACTAGAGAGT+TGG + Chr1:62406065-62406084 MsG0180003448.01.T01:CDS 35.0%
TCAAATGTGCGTACAAACTT+TGG + Chr1:62412350-62412369 MsG0180003448.01.T01:CDS 35.0%
TCAACTAGATATATGGCTAG+GGG + Chr1:62411667-62411686 MsG0180003448.01.T01:intron 35.0%
TCGCGAAAACAGAGAAAAAA+CGG - Chr1:62409730-62409749 None:intergenic 35.0%
TGAAGGTCTTTATCCTACTA+AGG - Chr1:62409174-62409193 None:intergenic 35.0%
TGATTCTTAATCCTCCACAT+AGG + Chr1:62405938-62405957 MsG0180003448.01.T01:CDS 35.0%
TGCAAATACACCTCATAATC+AGG - Chr1:62410833-62410852 None:intergenic 35.0%
TGCCAGATCATGAAAATACA+TGG + Chr1:62409008-62409027 MsG0180003448.01.T01:intron 35.0%
TGGTTAATTCATTGACGTTG+AGG - Chr1:62405615-62405634 None:intergenic 35.0%
TGTGGAGGATTAAGAATCAT+GGG - Chr1:62405937-62405956 None:intergenic 35.0%
TGTTGTTGCAACTATTTGCA+AGG - Chr1:62407456-62407475 None:intergenic 35.0%
TTAACCTGATATGTGGTGAA+AGG + Chr1:62411890-62411909 MsG0180003448.01.T01:CDS 35.0%
TTAATCTTGGGATGCTTAGT+AGG + Chr1:62406007-62406026 MsG0180003448.01.T01:CDS 35.0%
TTACAACCAATGAAACATGG+TGG - Chr1:62411150-62411169 None:intergenic 35.0%
TTATGAGGTGTATTTGCACA+GGG + Chr1:62410835-62410854 MsG0180003448.01.T01:CDS 35.0%
TTCAATTCCGCCATCAAAAA+GGG + Chr1:62407028-62407047 MsG0180003448.01.T01:CDS 35.0%
TTGAAATAGGAGAGAATGTG+GGG + Chr1:62410432-62410451 MsG0180003448.01.T01:CDS 35.0%
TTGTTAATGTCACTGGATGT+AGG + Chr1:62412074-62412093 MsG0180003448.01.T01:intron 35.0%
TTTGGAGATTTATTGGGGTT+TGG + Chr1:62409663-62409682 MsG0180003448.01.T01:intron 35.0%
! AAACTGTTTGAAAGAGCGTA+TGG - Chr1:62406792-62406811 None:intergenic 35.0%
! AATTTTGCTACAAGGGTTGT+TGG + Chr1:62410287-62410306 MsG0180003448.01.T01:CDS 35.0%
! AGGGCGTTTAATCTTCATAT+AGG + Chr1:62407660-62407679 MsG0180003448.01.T01:intron 35.0%
! ATAGCTTGTGTTGAACAATG+TGG + Chr1:62406892-62406911 MsG0180003448.01.T01:intron 35.0%
! ATTTTGCTACAAGGGTTGTT+GGG + Chr1:62410288-62410307 MsG0180003448.01.T01:CDS 35.0%
! CTGTCAAGAATTTTGCTACA+AGG + Chr1:62410279-62410298 MsG0180003448.01.T01:CDS 35.0%
! GATAAGCTCTAATACCATGT+TGG - Chr1:62411566-62411585 None:intergenic 35.0%
! GATAGAATAGAGCTCGATTT+TGG - Chr1:62408493-62408512 None:intergenic 35.0%
! GGACGAGATTTGAAATTGAA+AGG - Chr1:62405729-62405748 None:intergenic 35.0%
! GGGGATTTTTATAAAGGCTT+GGG + Chr1:62411687-62411706 MsG0180003448.01.T01:intron 35.0%
! TACTCTTATGGACTATGGAA+AGG + Chr1:62407604-62407623 MsG0180003448.01.T01:intron 35.0%
! TATTTAGAGCCTCTTTGTTC+AGG - Chr1:62406703-62406722 None:intergenic 35.0%
! TTGATAGCTCAAGCACATAA+TGG + Chr1:62405964-62405983 MsG0180003448.01.T01:CDS 35.0%
! TTTCATGCCATTTCTGCAAA+GGG - Chr1:62407766-62407785 None:intergenic 35.0%
! TTTTACATGGATATACACCC+TGG + Chr1:62412248-62412267 MsG0180003448.01.T01:intron 35.0%
!! ATATTGGCCATTTTATGTGC+AGG - Chr1:62408653-62408672 None:intergenic 35.0%
!! ATGCACGTTATTTTCAGTAG+TGG + Chr1:62411812-62411831 MsG0180003448.01.T01:intron 35.0%
!! CACAAAGCTCTTGTTGATTT+AGG + Chr1:62410500-62410519 MsG0180003448.01.T01:CDS 35.0%
!! CTAGCCTTTGGTATTTTCTT+TGG + Chr1:62411731-62411750 MsG0180003448.01.T01:intron 35.0%
!! CTCTTAGCTTGAATTTTGCT+AGG - Chr1:62405910-62405929 None:intergenic 35.0%
!! GAAGATTCTCGTTTTTGATG+AGG + Chr1:62407136-62407155 MsG0180003448.01.T01:CDS 35.0%
!! GATTTATTGGGGTTTGGTTT+TGG + Chr1:62409669-62409688 MsG0180003448.01.T01:intron 35.0%
!! GCTTTTGAAGGGATTATATG+TGG + Chr1:62405867-62405886 MsG0180003448.01.T01:CDS 35.0%
!! TATAAAAGCACTTGGTCTTC+AGG - Chr1:62407793-62407812 None:intergenic 35.0%
!! TCTTGTTGATTTAGGCTATG+AGG + Chr1:62410508-62410527 MsG0180003448.01.T01:CDS 35.0%
!! TTTGGTTCAGGGAATTGTTT+TGG + Chr1:62407969-62407988 MsG0180003448.01.T01:intron 35.0%
!! TTTTCATGCCATTTCTGCAA+AGG - Chr1:62407767-62407786 None:intergenic 35.0%
!!! AAGGAAACCATTGATTTTGG+TGG + Chr1:62408865-62408884 MsG0180003448.01.T01:intron 35.0%
!!! ACTTTTGAGATGCTTTGCTA+TGG + Chr1:62411351-62411370 MsG0180003448.01.T01:intron 35.0%
!!! AGGAAACCATTGATTTTGGT+GGG + Chr1:62408866-62408885 MsG0180003448.01.T01:intron 35.0%
!!! CTTTTGAGATGCTTTGCTAT+GGG + Chr1:62411352-62411371 MsG0180003448.01.T01:intron 35.0%
!!! GAGCATTTTAAGGTGGTAAT+AGG + Chr1:62409371-62409390 MsG0180003448.01.T01:intron 35.0%
!!! TTCGGCATCATTTTAGGATT+TGG + Chr1:62409645-62409664 MsG0180003448.01.T01:intron 35.0%
!!! TTTTGAGATGCTTTGCTATG+GGG + Chr1:62411353-62411372 MsG0180003448.01.T01:intron 35.0%
AAAGAGAAGACACACAGAGA+TGG - Chr1:62410672-62410691 None:intergenic 40.0%
AAAGGATATTGGGCCTTAGT+AGG + Chr1:62409158-62409177 MsG0180003448.01.T01:intron 40.0%
AACAAGATGAAACTGGTTGG+GGG + Chr1:62409079-62409098 MsG0180003448.01.T01:intron 40.0%
AAGTTGAAGGATCTTGCTAG+CGG + Chr1:62412167-62412186 MsG0180003448.01.T01:intron 40.0%
AATCCTAAACCCACCAATAC+TGG - Chr1:62409561-62409580 None:intergenic 40.0%
AATGCTAAAGAATGCCCTTG+GGG + Chr1:62406340-62406359 MsG0180003448.01.T01:intron 40.0%
ACTGCAAGTCTGCAAGTTTA+GGG + Chr1:62408788-62408807 MsG0180003448.01.T01:intron 40.0%
AGAACAAGAGCCTGATTATG+AGG + Chr1:62410820-62410839 MsG0180003448.01.T01:CDS 40.0%
AGCTGATGTTGCATTGCTAA+AGG + Chr1:62407640-62407659 MsG0180003448.01.T01:intron 40.0%
AGGCCCATTATGCAAGTTTA+TGG + Chr1:62409111-62409130 MsG0180003448.01.T01:intron 40.0%
ATAACAACCTGCGCCATAAT+AGG - Chr1:62407056-62407075 None:intergenic 40.0%
ATAATAGCAGGATAGACACG+TGG + Chr1:62409252-62409271 MsG0180003448.01.T01:intron 40.0%
ATCATGAAAATACATGGGGG+AGG + Chr1:62409014-62409033 MsG0180003448.01.T01:intron 40.0%
ATGGATATACACCCTGGTTT+AGG + Chr1:62412254-62412273 MsG0180003448.01.T01:intron 40.0%
ATTATGGCGCAGGTTGTTAT+TGG + Chr1:62407056-62407075 MsG0180003448.01.T01:CDS 40.0%
ATTGAATCCCTTCTGTCCAT+AGG - Chr1:62407014-62407033 None:intergenic 40.0%
ATTGAGGTTCTCCGTAAGAT+GGG + Chr1:62406954-62406973 MsG0180003448.01.T01:CDS 40.0%
ATTGATTGCTGTAGGAAGTG+CGG + Chr1:62409487-62409506 MsG0180003448.01.T01:intron 40.0%
CAACTAGATATATGGCTAGG+GGG + Chr1:62411668-62411687 MsG0180003448.01.T01:intron 40.0%
CAGAATCCTTTGTGCACTTA+TGG + Chr1:62409447-62409466 MsG0180003448.01.T01:intron 40.0%
CATAATCAGGCTCTTGTTCT+TGG - Chr1:62410820-62410839 None:intergenic 40.0%
CATCAATGGACAACTCTATC+AGG - Chr1:62411594-62411613 None:intergenic 40.0%
CATCACCAAAACCTAAACCA+GGG - Chr1:62412268-62412287 None:intergenic 40.0%
CATTTCTGTTAGGAACCTTG+TGG + Chr1:62411304-62411323 MsG0180003448.01.T01:intron 40.0%
CCTATTTCGGCTTATAGCTT+GGG + Chr1:62410008-62410027 MsG0180003448.01.T01:intron 40.0%
CGATCTTGTCTCTATCATCA+TGG - Chr1:62410559-62410578 None:intergenic 40.0%
CTATTTCGGCTTATAGCTTG+GGG + Chr1:62410009-62410028 MsG0180003448.01.T01:intron 40.0%
GAAAAAACATGCTGCACAAG+AGG + Chr1:62409207-62409226 MsG0180003448.01.T01:intron 40.0%
GAAAGGAAGAAGAGAGGATA+AGG - Chr1:62405712-62405731 None:intergenic 40.0%
GAACAAGATGAAACTGGTTG+GGG + Chr1:62409078-62409097 MsG0180003448.01.T01:intron 40.0%
GAGAACAAGATGAAACTGGT+TGG + Chr1:62409076-62409095 MsG0180003448.01.T01:intron 40.0%
GAGATTCAATTCAAGCTGTC+AGG + Chr1:62408149-62408168 MsG0180003448.01.T01:intron 40.0%
GCCTAACTAAACTAGCTCAA+GGG - Chr1:62411536-62411555 None:intergenic 40.0%
GCTGATGTTGCATTGCTAAA+GGG + Chr1:62407641-62407660 MsG0180003448.01.T01:intron 40.0%
GGAATGCGCAAAACATCATT+TGG - Chr1:62408632-62408651 None:intergenic 40.0%
GGACAAATACATAGAGCTTG+AGG - Chr1:62406054-62406073 None:intergenic 40.0%
GGATGCAGGAAAAGGATATT+GGG + Chr1:62409148-62409167 MsG0180003448.01.T01:intron 40.0%
GGTCATATCTCTTACCAATG+TGG - Chr1:62411476-62411495 None:intergenic 40.0%
GTCTGGACATCATTTCTGTT+AGG + Chr1:62411294-62411313 MsG0180003448.01.T01:intron 40.0%
GTTCAAAGATGGTTTGACTC+AGG + Chr1:62410586-62410605 MsG0180003448.01.T01:CDS 40.0%
TAACGTGCATAACTTACTGG+GGG - Chr1:62411802-62411821 None:intergenic 40.0%
TAAGATGAATGGATGGCATG+AGG - Chr1:62408558-62408577 None:intergenic 40.0%
TACAAGGGTTGTTGGGAAAA+AGG + Chr1:62410295-62410314 MsG0180003448.01.T01:CDS 40.0%
TACTAGAGAGTTGGCTATTC+AGG + Chr1:62406074-62406093 MsG0180003448.01.T01:CDS 40.0%
TATGAGGTCACTTCCATACA+AGG + Chr1:62410524-62410543 MsG0180003448.01.T01:CDS 40.0%
TCATCACCAAAACCTAAACC+AGG - Chr1:62412269-62412288 None:intergenic 40.0%
TCCTATTTCGGCTTATAGCT+TGG + Chr1:62410007-62410026 MsG0180003448.01.T01:intron 40.0%
TGAACAGGCTGTGTAGAATA+AGG + Chr1:62408253-62408272 MsG0180003448.01.T01:intron 40.0%
TGAATAGCCAACTCTCTAGT+AGG - Chr1:62406075-62406094 None:intergenic 40.0%
TGAGCTATCAAATCCCTATG+TGG - Chr1:62405955-62405974 None:intergenic 40.0%
TGCCTAACTAAACTAGCTCA+AGG - Chr1:62411537-62411556 None:intergenic 40.0%
TGGATGCAGGAAAAGGATAT+TGG + Chr1:62409147-62409166 MsG0180003448.01.T01:intron 40.0%
TGGCAACAACACTTTCTTTG+AGG - Chr1:62411130-62411149 None:intergenic 40.0%
TTGAATGCCCTTTGCAGAAA+TGG + Chr1:62407756-62407775 MsG0180003448.01.T01:intron 40.0%
TTGTTGCCACCATGTTTCAT+TGG + Chr1:62411141-62411160 MsG0180003448.01.T01:intron 40.0%
TTTCCTCTCATAGCACTTGA+AGG - Chr1:62409191-62409210 None:intergenic 40.0%
! ATAATAGGCGCCCTTTTTGA+TGG - Chr1:62407041-62407060 None:intergenic 40.0%
! CCCCATGTATTTTCATGATC+TGG - Chr1:62409013-62409032 None:intergenic 40.0%
! GAAAATACCAAAGGCTAGCT+CGG - Chr1:62411729-62411748 None:intergenic 40.0%
! GGCTAGGGGGATTTTTATAA+AGG + Chr1:62411681-62411700 MsG0180003448.01.T01:intron 40.0%
! GGCTCTTTATTGATTGCTGT+AGG + Chr1:62409479-62409498 MsG0180003448.01.T01:intron 40.0%
! GGGGGATTTTTATAAAGGCT+TGG + Chr1:62411686-62411705 MsG0180003448.01.T01:intron 40.0%
! GTGATTGGTTATTTGTTGGG+TGG + Chr1:62407716-62407735 MsG0180003448.01.T01:intron 40.0%
! TAGGATTAGCAAGGCTAGTT+TGG + Chr1:62409574-62409593 MsG0180003448.01.T01:intron 40.0%
! TCCCTTGAGCTAGTTTAGTT+AGG + Chr1:62411532-62411551 MsG0180003448.01.T01:intron 40.0%
! TCTGACCCCAAATCTTTTGA+TGG + Chr1:62411095-62411114 MsG0180003448.01.T01:intron 40.0%
! TTGGATTCTCTGATGATGCA+GGG + Chr1:62409593-62409612 MsG0180003448.01.T01:intron 40.0%
! TTTGGATTCTCTGATGATGC+AGG + Chr1:62409592-62409611 MsG0180003448.01.T01:intron 40.0%
! TTTTGGTCATGCTTTCCCAA+TGG - Chr1:62408476-62408495 None:intergenic 40.0%
!! AAAAAGGTGCCGCATATAGA+CGG - Chr1:62409702-62409721 None:intergenic 40.0%
!! AGGGTTTATGAATTTGGTGC+AGG + Chr1:62405780-62405799 MsG0180003448.01.T01:intron 40.0%
!! ATACACCCTGGTTTAGGTTT+TGG + Chr1:62412260-62412279 MsG0180003448.01.T01:intron 40.0%
!! ATCAAAAAGGGCGCCTATTA+TGG + Chr1:62407040-62407059 MsG0180003448.01.T01:CDS 40.0%
!! GATTCTCGTTTTTGATGAGG+CGG + Chr1:62407139-62407158 MsG0180003448.01.T01:CDS 40.0%
!! GGATTTGTTTTCTTCGTCGA+TGG - Chr1:62405635-62405654 None:intergenic 40.0%
!! GGTTTGATTGGTTTCTTCGT+CGG - Chr1:62405563-62405582 None:intergenic 40.0%
!! TTTGGAGTACCAGTATTGGT+GGG + Chr1:62409549-62409568 MsG0180003448.01.T01:intron 40.0%
!!! GGCAAGGAAACCATTGATTT+TGG + Chr1:62408862-62408881 MsG0180003448.01.T01:intron 40.0%
!!! GGTTTTGGTGATGAAGAGTT+TGG + Chr1:62412275-62412294 MsG0180003448.01.T01:intron 40.0%
!!! TGATTGGCTTGTGTTTTTGC+AGG + Chr1:62410226-62410245 MsG0180003448.01.T01:intron 40.0%
!!! TTATTGGGGTTTGGTTTTGG+AGG + Chr1:62409672-62409691 MsG0180003448.01.T01:intron 40.0%
AAAAGGTGGTAATAGGCGGT+TGG + Chr1:62409806-62409825 MsG0180003448.01.T01:intron 45.0%
AAAGAGGATTCGTCCTTGAC+TGG + Chr1:62410034-62410053 MsG0180003448.01.T01:intron 45.0%
AAGTGCAATCCTTCCAGTCA+AGG - Chr1:62410050-62410069 None:intergenic 45.0%
AAGTTTATGGTAGGAAGGGC+AGG + Chr1:62409124-62409143 MsG0180003448.01.T01:intron 45.0%
ACAAGATGAAACTGGTTGGG+GGG + Chr1:62409080-62409099 MsG0180003448.01.T01:intron 45.0%
ACTAGCTCAAGGGAAATGAC+TGG - Chr1:62411526-62411545 None:intergenic 45.0%
ACTCCAAACCAGAACAGACA+CGG - Chr1:62409537-62409556 None:intergenic 45.0%
ACTCTCCATATGTCCAACTC+AGG + Chr1:62411624-62411643 MsG0180003448.01.T01:intron 45.0%
AGACCTTCAAGTGCTATGAG+AGG + Chr1:62409185-62409204 MsG0180003448.01.T01:intron 45.0%
AGCATGTGGGTTCAAACCAA+GGG - Chr1:62408989-62409008 None:intergenic 45.0%
ATCAGCAACAGGTGCTCATT+TGG + Chr1:62410645-62410664 MsG0180003448.01.T01:intron 45.0%
ATGACGAACCGCTGTAATGT+TGG - Chr1:62405689-62405708 None:intergenic 45.0%
CATCCCTTTCACCACATATC+AGG - Chr1:62411897-62411916 None:intergenic 45.0%
CATTCAAGTCATTCTCCCAG+TGG - Chr1:62407743-62407762 None:intergenic 45.0%
CATTGAGGTTCTCCGTAAGA+TGG + Chr1:62406953-62406972 MsG0180003448.01.T01:CDS 45.0%
CCCAAGCTATAAGCCGAAAT+AGG - Chr1:62410011-62410030 None:intergenic 45.0%
CTCAGAATGTGCAGTTCCTA+TGG + Chr1:62406995-62407014 MsG0180003448.01.T01:CDS 45.0%
CTCTCCATATGTCCAACTCA+GGG + Chr1:62411625-62411644 MsG0180003448.01.T01:intron 45.0%
CTTATAGCTTGGGGCTAAAG+AGG + Chr1:62410018-62410037 MsG0180003448.01.T01:intron 45.0%
CTTCCCTTTACCCATCACAA+GGG - Chr1:62407840-62407859 None:intergenic 45.0%
GACTGCAAGTCTGCAAGTTT+AGG + Chr1:62408787-62408806 MsG0180003448.01.T01:intron 45.0%
GCGCATTCCTGCACATAAAA+TGG + Chr1:62408643-62408662 MsG0180003448.01.T01:intron 45.0%
GCTATCAAATCCCTATGTGG+AGG - Chr1:62405952-62405971 None:intergenic 45.0%
GCTCAAGCACATAATGGTTC+AGG + Chr1:62405970-62405989 MsG0180003448.01.T01:CDS 45.0%
GTCGGGATCATCTAGAGATT+TGG - Chr1:62405662-62405681 None:intergenic 45.0%
TCAATCTTAGCAAGCTCGTC+AGG - Chr1:62410392-62410411 None:intergenic 45.0%
TCTCCATATGTCCAACTCAG+GGG + Chr1:62411626-62411645 MsG0180003448.01.T01:intron 45.0%
TCTTCCCTTTACCCATCACA+AGG - Chr1:62407841-62407860 None:intergenic 45.0%
TGCAGTTCCTATGGACAGAA+GGG + Chr1:62407004-62407023 MsG0180003448.01.T01:CDS 45.0%
TGTTAGGAACCTTGTGGGTT+GGG + Chr1:62411310-62411329 MsG0180003448.01.T01:intron 45.0%
TTCATGATCTGGCAGCATGT+GGG - Chr1:62409002-62409021 None:intergenic 45.0%
TTCATTGACGTTGAGGGAAG+AGG - Chr1:62405608-62405627 None:intergenic 45.0%
TTCCCTTTACCCATCACAAG+GGG - Chr1:62407839-62407858 None:intergenic 45.0%
TTGAGGTTCTCCGTAAGATG+GGG + Chr1:62406955-62406974 MsG0180003448.01.T01:CDS 45.0%
TTTCATGATCTGGCAGCATG+TGG - Chr1:62409003-62409022 None:intergenic 45.0%
TTTCCACGTCATAGCAGAGT+TGG - Chr1:62408936-62408955 None:intergenic 45.0%
! AAAACTGTGCTGTTGCAGGA+TGG + Chr1:62408087-62408106 MsG0180003448.01.T01:intron 45.0%
! AATCCCCTGAGTTGGACATA+TGG - Chr1:62411632-62411651 None:intergenic 45.0%
! ATGGTGGAGATTTGAAGCTC+CGG - Chr1:62405484-62405503 None:intergenic 45.0%
! CAGGTTGTTATTGGTACTCC+TGG + Chr1:62407065-62407084 MsG0180003448.01.T01:CDS 45.0%
! CTGTAAAACTGTGCTGTTGC+AGG + Chr1:62408083-62408102 MsG0180003448.01.T01:intron 45.0%
! GTTTGGAGTACCAGTATTGG+TGG + Chr1:62409548-62409567 MsG0180003448.01.T01:intron 45.0%
! TACTCAGCAGAGTACTTCAG+TGG - Chr1:62410788-62410807 None:intergenic 45.0%
! TATTTGTTGGGTGGACCACT+GGG + Chr1:62407725-62407744 MsG0180003448.01.T01:intron 45.0%
! TGGATTCTCTGATGATGCAG+GGG + Chr1:62409594-62409613 MsG0180003448.01.T01:intron 45.0%
! TGTATTTGCACAGGGTTGGT+AGG + Chr1:62410843-62410862 MsG0180003448.01.T01:CDS 45.0%
! TTATTTGTTGGGTGGACCAC+TGG + Chr1:62407724-62407743 MsG0180003448.01.T01:intron 45.0%
!! AATTTGGTGCAGGTTACAGC+TGG + Chr1:62405790-62405809 MsG0180003448.01.T01:intron 45.0%
!! ATGGTCAAGAGCACCTTGTA+TGG - Chr1:62410540-62410559 None:intergenic 45.0%
!! CTGGTTTGGAGTACCAGTAT+TGG + Chr1:62409545-62409564 MsG0180003448.01.T01:intron 45.0%
!! GTACCAGTATTGGTGGGTTT+AGG + Chr1:62409555-62409574 MsG0180003448.01.T01:intron 45.0%
!! GTATTTGCACAGGGTTGGTA+GGG + Chr1:62410844-62410863 MsG0180003448.01.T01:CDS 45.0%
!! TGGTGGGTTTAGGATTAGCA+AGG + Chr1:62409565-62409584 MsG0180003448.01.T01:intron 45.0%
!! TTGTGATGGGTAAAGGGAAG+AGG + Chr1:62407840-62407859 MsG0180003448.01.T01:intron 45.0%
!!! GTGCACTTATGGTTTTGTGC+TGG + Chr1:62409458-62409477 MsG0180003448.01.T01:intron 45.0%
!!! ACAAAATATATATTTTTTAA+TGG - Chr1:62406497-62406516 None:intergenic 5.0%
!!! TTATATTTTAAATCATTTTT+TGG - Chr1:62406680-62406699 None:intergenic 5.0%
AAAGAATGCCCTTGGGGCAT+TGG + Chr1:62406346-62406365 MsG0180003448.01.T01:intron 50.0%
AAAGCCACGGGCAAGAACAT+CGG - Chr1:62410624-62410643 None:intergenic 50.0%
AAATGCTCTGCACCCACCTT+CGG - Chr1:62409359-62409378 None:intergenic 50.0%
AACTCAATTGCTCGTCGCAC+AGG - Chr1:62407305-62407324 None:intergenic 50.0%
AAGGATCTTGCTAGCGGTGT+TGG + Chr1:62412173-62412192 MsG0180003448.01.T01:intron 50.0%
ACATGCTGCACAAGAGGAGT+TGG + Chr1:62409213-62409232 MsG0180003448.01.T01:intron 50.0%
AGATGACTCTCCCCTTGTGA+TGG + Chr1:62407826-62407845 MsG0180003448.01.T01:intron 50.0%
AGCTTGAGGAGCTTGCAGAT+TGG - Chr1:62406040-62406059 None:intergenic 50.0%
AGGATAGACACGTGGCAATG+AGG + Chr1:62409260-62409279 MsG0180003448.01.T01:intron 50.0%
AGGATTCGTCCTTGACTGGA+AGG + Chr1:62410038-62410057 MsG0180003448.01.T01:intron 50.0%
CAGCATGTGGGTTCAAACCA+AGG - Chr1:62408990-62409009 None:intergenic 50.0%
CCGTGTACTTCCCCATCTTA+CGG - Chr1:62406968-62406987 None:intergenic 50.0%
CCTCTTAACCAATGCCCCAA+GGG - Chr1:62406357-62406376 None:intergenic 50.0%
CCTGTTGCTGATCAAAGCCA+CGG - Chr1:62410637-62410656 None:intergenic 50.0%
CGACGACACCAACATTACAG+CGG + Chr1:62405678-62405697 MsG0180003448.01.T01:CDS 50.0%
CTCCAAACCAGAACAGACAC+GGG - Chr1:62409536-62409555 None:intergenic 50.0%
CTGGTTGGGGGGATATTGAT+AGG + Chr1:62409091-62409110 MsG0180003448.01.T01:intron 50.0%
CTGTTAGGAACCTTGTGGGT+TGG + Chr1:62411309-62411328 MsG0180003448.01.T01:intron 50.0%
CTGTTGCTGATCAAAGCCAC+GGG - Chr1:62410636-62410655 None:intergenic 50.0%
GAGGATACGGAAATCAGGCA+AGG + Chr1:62409293-62409312 MsG0180003448.01.T01:intron 50.0%
GAGGTGTATTTGCACAGGGT+TGG + Chr1:62410839-62410858 MsG0180003448.01.T01:CDS 50.0%
GATGACTCTCCCCTTGTGAT+GGG + Chr1:62407827-62407846 MsG0180003448.01.T01:intron 50.0%
GCTTGAGGAGCTTGCAGATT+GGG - Chr1:62406039-62406058 None:intergenic 50.0%
GGAGAGAGGATACGGAAATC+AGG + Chr1:62409288-62409307 MsG0180003448.01.T01:intron 50.0%
GGATAGACACGTGGCAATGA+GGG + Chr1:62409261-62409280 MsG0180003448.01.T01:intron 50.0%
GGTCATGCTTTCCCAATGGA+TGG - Chr1:62408472-62408491 None:intergenic 50.0%
GTGCAGTTCCTATGGACAGA+AGG + Chr1:62407003-62407022 MsG0180003448.01.T01:CDS 50.0%
GTTGAGGGAAGAGGTTTCGT+CGG - Chr1:62405599-62405618 None:intergenic 50.0%
TCCAACTCAGGGGATTTGAC+TGG + Chr1:62411636-62411655 MsG0180003448.01.T01:intron 50.0%
TCCACTGCCATCCAAAAGCT+GGG + Chr1:62405528-62405547 MsG0180003448.01.T01:CDS 50.0%
TCCTCTTAACCAATGCCCCA+AGG - Chr1:62406358-62406377 None:intergenic 50.0%
TGATAGCTCTTCGAACGTCG+TGG - Chr1:62405836-62405855 None:intergenic 50.0%
TGCTGGCCCACCAAAATCAA+TGG - Chr1:62408875-62408894 None:intergenic 50.0%
TTGATGTAGCAGGTTCCGTG+TGG + Chr1:62409409-62409428 MsG0180003448.01.T01:intron 50.0%
TTTATGGTAGGAAGGGCAGG+TGG + Chr1:62409127-62409146 MsG0180003448.01.T01:intron 50.0%
! AAGCCTTTTCCCACTAAGCG+GGG + Chr1:62408329-62408348 MsG0180003448.01.T01:intron 50.0%
! ATAGGCGCCCTTTTTGATGG+CGG - Chr1:62407038-62407057 None:intergenic 50.0%
! ATGATGCAGGGGTATGCATG+CGG + Chr1:62409605-62409624 MsG0180003448.01.T01:intron 50.0%
! ATTTGAAGCTCCGGTGGGTT+AGG - Chr1:62405475-62405494 None:intergenic 50.0%
! CAAAGGCTAGCTCGGATCAA+GGG - Chr1:62411721-62411740 None:intergenic 50.0%
! CAAGCCTTTTCCCACTAAGC+GGG + Chr1:62408328-62408347 MsG0180003448.01.T01:intron 50.0%
! CCAAGCCTTTTCCCACTAAG+CGG + Chr1:62408327-62408346 MsG0180003448.01.T01:intron 50.0%
! CCGTAAGATGGGGAAGTACA+CGG + Chr1:62406965-62406984 MsG0180003448.01.T01:CDS 50.0%
! CGTAAGATGGGGAAGTACAC+GGG + Chr1:62406966-62406985 MsG0180003448.01.T01:CDS 50.0%
! GTAAGATGGGGAAGTACACG+GGG + Chr1:62406967-62406986 MsG0180003448.01.T01:CDS 50.0%
! TGGAGATTTGAAGCTCCGGT+GGG - Chr1:62405480-62405499 None:intergenic 50.0%
! TGGGAAAAGGCTTGGTTGTG+TGG - Chr1:62408322-62408341 None:intergenic 50.0%
!! CGCTGTAATGTTGGTGTCGT+CGG - Chr1:62405680-62405699 None:intergenic 50.0%
!! CGGTTGGTTAGTCTGTACTG+AGG + Chr1:62409822-62409841 MsG0180003448.01.T01:intron 50.0%
!! CTCCCCTTGTGATGGGTAAA+GGG + Chr1:62407834-62407853 MsG0180003448.01.T01:intron 50.0%
!! GCTGTAATGTTGGTGTCGTC+GGG - Chr1:62405679-62405698 None:intergenic 50.0%
!! GGAGGTGTTCCGTCTATATG+CGG + Chr1:62409690-62409709 MsG0180003448.01.T01:intron 50.0%
!! GGGTGCAGAGCATTTTAAGG+TGG + Chr1:62409364-62409383 MsG0180003448.01.T01:intron 50.0%
!! GGTGGGTGCAGAGCATTTTA+AGG + Chr1:62409361-62409380 MsG0180003448.01.T01:intron 50.0%
!! GGTTTCTTCGTCGGCTTGAT+CGG - Chr1:62405554-62405573 None:intergenic 50.0%
!! TCTCCCCTTGTGATGGGTAA+AGG + Chr1:62407833-62407852 MsG0180003448.01.T01:intron 50.0%
!! TGCTGCAGTGTTGATGTAGC+AGG + Chr1:62409399-62409418 MsG0180003448.01.T01:intron 50.0%
!! TTGAGGAGTGTTCGCGACTT+GGG - Chr1:62405399-62405418 None:intergenic 50.0%
!! TTTGAAGCTCCGGTGGGTTA+GGG - Chr1:62405474-62405493 None:intergenic 50.0%
AGGCTCTTGTTCTTGGCCAC+GGG - Chr1:62410813-62410832 None:intergenic 55.0%
CAGGCTCTTGTTCTTGGCCA+CGG - Chr1:62410814-62410833 None:intergenic 55.0%
CCGCTTAGTGGGAAAAGGCT+TGG - Chr1:62408330-62408349 None:intergenic 55.0%
CGAAGAGCTATCACTCTCGC+CGG + Chr1:62405843-62405862 MsG0180003448.01.T01:CDS 55.0%
CTCCACTGCCATCCAAAAGC+TGG + Chr1:62405527-62405546 MsG0180003448.01.T01:CDS 55.0%
GCCAGTCAAATCCCCTGAGT+TGG - Chr1:62411640-62411659 None:intergenic 55.0%
TACTCTGCTGAGTACACCCG+TGG + Chr1:62410794-62410813 MsG0180003448.01.T01:CDS 55.0%
TAGCTCTTCGAACGTCGTGG+CGG - Chr1:62405833-62405852 None:intergenic 55.0%
TAGGGTTACGGAGGAAGGAG+AGG - Chr1:62405456-62405475 None:intergenic 55.0%
TGCTGCACAAGAGGAGTTGG+TGG + Chr1:62409216-62409235 MsG0180003448.01.T01:intron 55.0%
TGGCCAACTCTGCTATGACG+TGG + Chr1:62408930-62408949 MsG0180003448.01.T01:intron 55.0%
TTGGTAGGGCTGGGCGATTT+GGG + Chr1:62410858-62410877 MsG0180003448.01.T01:CDS 55.0%
TTTGGATGGCAGTGGAGGAG+AGG - Chr1:62405524-62405543 None:intergenic 55.0%
! ACTCTCGCCGGAGCTTTTGA+AGG + Chr1:62405855-62405874 MsG0180003448.01.T01:CDS 55.0%
! AGGAGGTGCATAACCGAAGG+TGG + Chr1:62409343-62409362 MsG0180003448.01.T01:intron 55.0%
! ATTGCTGTAGGAAGTGCGGC+TGG + Chr1:62409491-62409510 MsG0180003448.01.T01:intron 55.0%
! CAGCTTTTGGATGGCAGTGG+AGG - Chr1:62405529-62405548 None:intergenic 55.0%
! CCAAAGGCTAGCTCGGATCA+AGG - Chr1:62411722-62411741 None:intergenic 55.0%
! CTCTCGCCGGAGCTTTTGAA+GGG + Chr1:62405856-62405875 MsG0180003448.01.T01:CDS 55.0%
! CTTTTCCCACTAAGCGGGGT+CGG + Chr1:62408333-62408352 MsG0180003448.01.T01:intron 55.0%
! GCTGCACAAGAGGAGTTGGT+GGG + Chr1:62409217-62409236 MsG0180003448.01.T01:intron 55.0%
! GGAGGTGCATAACCGAAGGT+GGG + Chr1:62409344-62409363 MsG0180003448.01.T01:intron 55.0%
! GGCGGATCAAATGCTTGCTG+AGG + Chr1:62407157-62407176 MsG0180003448.01.T01:CDS 55.0%
! GGTGGAAGGTTCTGACATGG+TGG - Chr1:62405500-62405519 None:intergenic 55.0%
! GTGGAGATTTGAAGCTCCGG+TGG - Chr1:62405481-62405500 None:intergenic 55.0%
! TGATCGGCCCAGCTTTTGGA+TGG - Chr1:62405538-62405557 None:intergenic 55.0%
! TGCCCGTGTCTGTTCTGGTT+TGG + Chr1:62409531-62409550 MsG0180003448.01.T01:intron 55.0%
! TGGGTTAGGGTTACGGAGGA+AGG - Chr1:62405461-62405480 None:intergenic 55.0%
!! AACGTCGTGGCGGATGTGTA+AGG - Chr1:62405823-62405842 None:intergenic 55.0%
!! CCCTTGGGGCATTGGTTAAG+AGG + Chr1:62406354-62406373 MsG0180003448.01.T01:intron 55.0%
!! CCGTGGCTTTGATCAGCAAC+AGG + Chr1:62410634-62410653 MsG0180003448.01.T01:CDS 55.0%
!! CCTTGATCCGAGCTAGCCTT+TGG + Chr1:62411719-62411738 MsG0180003448.01.T01:intron 55.0%
!! GAAGTGCGGCTGGTGTTATG+TGG + Chr1:62409501-62409520 MsG0180003448.01.T01:intron 55.0%
!! GGAGTTGGTGGGACGAGATA+TGG + Chr1:62409228-62409247 MsG0180003448.01.T01:intron 55.0%
!! GGTGGTGGAAGGTTCTGACA+TGG - Chr1:62405503-62405522 None:intergenic 55.0%
!! GTTGAGGAGTGTTCGCGACT+TGG - Chr1:62405400-62405419 None:intergenic 55.0%
!! TGAGGAGTGTTCGCGACTTG+GGG - Chr1:62405398-62405417 None:intergenic 55.0%
ACACGTGGCAATGAGGGAGC+GGG + Chr1:62409267-62409286 MsG0180003448.01.T01:intron 60.0%
ACTAAGCGGGGTCGGCTACA+TGG + Chr1:62408341-62408360 MsG0180003448.01.T01:intron 60.0%
AGGGAGCGGGAGAGAGGATA+CGG + Chr1:62409280-62409299 MsG0180003448.01.T01:intron 60.0%
ATGTAGCCGACCCCGCTTAG+TGG - Chr1:62408342-62408361 None:intergenic 60.0%
CCTCCGTAACCCTAACCCAC+CGG + Chr1:62405462-62405481 MsG0180003448.01.T01:five_prime_UTR 60.0%
CGACCCCGCTTAGTGGGAAA+AGG - Chr1:62408335-62408354 None:intergenic 60.0%
CTCACTCTGCCCAACCCACA+AGG - Chr1:62411322-62411341 None:intergenic 60.0%
CTCTCTGCCCGTGTCTGTTC+TGG + Chr1:62409526-62409545 MsG0180003448.01.T01:intron 60.0%
GACACGTGGCAATGAGGGAG+CGG + Chr1:62409266-62409285 MsG0180003448.01.T01:intron 60.0%
GAGGGAAGAGGTTTCGTCGG+CGG - Chr1:62405596-62405615 None:intergenic 60.0%
GGCGGAGGTGGAGGTTTGAT+TGG - Chr1:62405575-62405594 None:intergenic 60.0%
GGGCAGGTGGATGCAGGAAA+AGG + Chr1:62409140-62409159 MsG0180003448.01.T01:intron 60.0%
TAGGAAGGGCAGGTGGATGC+AGG + Chr1:62409134-62409153 MsG0180003448.01.T01:intron 60.0%
TCGACCGATGTTCTTGCCCG+TGG + Chr1:62410617-62410636 MsG0180003448.01.T01:CDS 60.0%
TGTAGCCGACCCCGCTTAGT+GGG - Chr1:62408341-62408360 None:intergenic 60.0%
! GCCCAGCTTTTGGATGGCAG+TGG - Chr1:62405532-62405551 None:intergenic 60.0%
! GGCTTGATCGGCCCAGCTTT+TGG - Chr1:62405542-62405561 None:intergenic 60.0%
! GTTGGTAGGGCTGGGCGATT+TGG + Chr1:62410857-62410876 MsG0180003448.01.T01:CDS 60.0%
!! AAGGGCGCCTATTATGGCGC+AGG + Chr1:62407046-62407065 MsG0180003448.01.T01:CDS 60.0%
!! AGTGGAGGAGAGGTGGTGGA+AGG - Chr1:62405514-62405533 None:intergenic 60.0%
!! GAGGAGTGTTCGCGACTTGG+GGG - Chr1:62405397-62405416 None:intergenic 60.0%
!! GCTCCGGTGGGTTAGGGTTA+CGG - Chr1:62405468-62405487 None:intergenic 60.0%
!! TGCACAGGGTTGGTAGGGCT+GGG + Chr1:62410849-62410868 MsG0180003448.01.T01:CDS 60.0%
!! TTGCACAGGGTTGGTAGGGC+TGG + Chr1:62410848-62410867 MsG0180003448.01.T01:CDS 60.0%
GCAATGAGGGAGCGGGAGAG+AGG + Chr1:62409274-62409293 MsG0180003448.01.T01:intron 65.0%
GGAAGAGGTTTCGTCGGCGG+CGG - Chr1:62405593-62405612 None:intergenic 65.0%
GGATGGCAGTGGAGGAGAGG+TGG - Chr1:62405521-62405540 None:intergenic 65.0%
TGGCAGTGGAGGAGAGGTGG+TGG - Chr1:62405518-62405537 None:intergenic 65.0%
! GCTGGGCGATTTGGGCGCAA+GGG + Chr1:62410866-62410885 MsG0180003448.01.T01:CDS 65.0%
!! CCGGTGGGTTAGGGTTACGG+AGG - Chr1:62405465-62405484 None:intergenic 65.0%
AGAGGTTTCGTCGGCGGCGG+AGG - Chr1:62405590-62405609 None:intergenic 70.0%
! GGCTGGGCGATTTGGGCGCA+AGG + Chr1:62410865-62410884 MsG0180003448.01.T01:CDS 70.0%
GGTTTCGTCGGCGGCGGAGG+TGG - Chr1:62405587-62405606 None:intergenic 75.0%
TTCGTCGGCGGCGGAGGTGG+AGG - Chr1:62405584-62405603 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 62405344 62412409 62405344 ID=MsG0180003448.01;Name=MsG0180003448.01
Chr1 mRNA 62405344 62412409 62405344 ID=MsG0180003448.01.T01;Parent=MsG0180003448.01;Name=MsG0180003448.01.T01;_AED=0.41;_eAED=0.41;_QI=158|0.71|0.75|1|1|1|8|0|508
Chr1 exon 62405344 62405699 62405344 ID=MsG0180003448.01.T01:exon:4487;Parent=MsG0180003448.01.T01
Chr1 exon 62405802 62406095 62405802 ID=MsG0180003448.01.T01:exon:4488;Parent=MsG0180003448.01.T01
Chr1 exon 62406951 62407178 62406951 ID=MsG0180003448.01.T01:exon:4489;Parent=MsG0180003448.01.T01
Chr1 exon 62410248 62410655 62410248 ID=MsG0180003448.01.T01:exon:4490;Parent=MsG0180003448.01.T01
Chr1 exon 62410758 62410887 62410758 ID=MsG0180003448.01.T01:exon:4491;Parent=MsG0180003448.01.T01
Chr1 exon 62411881 62411966 62411881 ID=MsG0180003448.01.T01:exon:4492;Parent=MsG0180003448.01.T01
Chr1 exon 62412096 62412144 62412096 ID=MsG0180003448.01.T01:exon:4493;Parent=MsG0180003448.01.T01
Chr1 exon 62412276 62412409 62412276 ID=MsG0180003448.01.T01:exon:4494;Parent=MsG0180003448.01.T01
Chr1 five_prime_UTR 62405344 62405501 62405344 ID=MsG0180003448.01.T01:five_prime_utr;Parent=MsG0180003448.01.T01
Chr1 CDS 62405502 62405699 62405502 ID=MsG0180003448.01.T01:cds;Parent=MsG0180003448.01.T01
Chr1 CDS 62405802 62406095 62405802 ID=MsG0180003448.01.T01:cds;Parent=MsG0180003448.01.T01
Chr1 CDS 62406951 62407178 62406951 ID=MsG0180003448.01.T01:cds;Parent=MsG0180003448.01.T01
Chr1 CDS 62410248 62410655 62410248 ID=MsG0180003448.01.T01:cds;Parent=MsG0180003448.01.T01
Chr1 CDS 62410758 62410887 62410758 ID=MsG0180003448.01.T01:cds;Parent=MsG0180003448.01.T01
Chr1 CDS 62411881 62411966 62411881 ID=MsG0180003448.01.T01:cds;Parent=MsG0180003448.01.T01
Chr1 CDS 62412096 62412144 62412096 ID=MsG0180003448.01.T01:cds;Parent=MsG0180003448.01.T01
Chr1 CDS 62412276 62412409 62412276 ID=MsG0180003448.01.T01:cds;Parent=MsG0180003448.01.T01
Gene Sequence

>MsG0180003448.01.T01

ATGTCAGAACCTTCCACCACCTCTCCTCCACTGCCATCCAAAAGCTGGGCCGATCAAGCCGACGAAGAAACCAATCAAACCTCCACCTCCGCCGCCGACGAAACCTCTTCCCTCAACGTCAATGAATTAACCATCGACGAAGAAAACAAATCCCATTCCAAATCTCTAGATGATCCCGACGACACCAACATTACAGCGGTTACAGCTGGAGATACTCCTTACACATCCGCCACGACGTTCGAAGAGCTATCACTCTCGCCGGAGCTTTTGAAGGGATTATATGTGGAAATGAAGTTTGAAAAACCTAGCAAAATTCAAGCTAAGAGTTTGCCCATGATTCTTAATCCTCCACATAGGGATTTGATAGCTCAAGCACATAATGGTTCAGGAAAAACTACTTGTTTTAATCTTGGGATGCTTAGTAGGGTTGATCCCAATCTGCAAGCTCCTCAAGCTCTATGTATTTGTCCTACTAGAGAGTTGGCTATTCAGAACATTGAGGTTCTCCGTAAGATGGGGAAGTACACGGGGATTAGCTCAGAATGTGCAGTTCCTATGGACAGAAGGGATTCAATTCCGCCATCAAAAAGGGCGCCTATTATGGCGCAGGTTGTTATTGGTACTCCTGGCACAATTAAGAATTTGATTACTTATAAGAAACTTGGAGTGACAAAATTGAAGATTCTCGTTTTTGATGAGGCGGATCAAATGCTTGCTGAGGTTCTTCTGTTTTCTGCTACATTTAATGACACTGTCAAGAATTTTGCTACAAGGGTTGTTGGGAAAAAGGAGCATAATGAACTTTTTGTGAAGAAAGAGGAGCTATCTTTAGATGCAGTAAAACAGTACAAAGTTCTTGTTCCTGACGAGCTTGCTAAGATTGACGTGATTAAAGATTATATATTTGAAATAGGAGAGAATGTGGGGCAAACTATTATATTTGTGCGCACTAGAAATAGTGCAAAAATGTTGCACAAAGCTCTTGTTGATTTAGGCTATGAGGTCACTTCCATACAAGGTGCTCTTGACCATGATGATAGAGACAAGATCGTCAAAGAGTTCAAAGATGGTTTGACTCAGGTTCTTATATCGACCGATGTTCTTGCCCGTGGCTTTGATCAGCAACAGGTTAATTTGGTTATAAACTATGATCTTCCACTGAAGTACTCTGCTGAGTACACCCGTGGCCAAGAACAAGAGCCTGATTATGAGGTGTATTTGCACAGGGTTGGTAGGGCTGGGCGATTTGGGCGCAAGGGGGCTGTATTTAACCTGATATGTGGTGAAAGGGATGAAAAAACCTTGTCAAAGATTGAAAAACATTTTGGCACCTATATAAAAGAGGTGAAAGACAGAAGTGTTGAAGACTATAAAGTTGCTCTTAAAGAAGCTGGTTTTGGTGATGAAGAGTTTGGCTTCAATGTTTATTATGGTATCATCGCTGCTTTGCTGTCTTCAGTTTCGAGTTCAAATGTGCGTACAAACTTTGGACTAGCCTATTTAAAGAATCCATGGTGTTCTATTTAA
Protein sequence

>MsG0180003448.01.T01

MSEPSTTSPPLPSKSWADQADEETNQTSTSAADETSSLNVNELTIDEENKSHSKSLDDPDDTNITAVTAGDTPYTSATTFEELSLSPELLKGLYVEMKFEKPSKIQAKSLPMILNPPHRDLIAQAHNGSGKTTCFNLGMLSRVDPNLQAPQALCICPTRELAIQNIEVLRKMGKYTGISSECAVPMDRRDSIPPSKRAPIMAQVVIGTPGTIKNLITYKKLGVTKLKILVFDEADQMLAEVLLFSATFNDTVKNFATRVVGKKEHNELFVKKEELSLDAVKQYKVLVPDELAKIDVIKDYIFEIGENVGQTIIFVRTRNSAKMLHKALVDLGYEVTSIQGALDHDDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYSAEYTRGQEQEPDYEVYLHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKHFGTYIKEVKDRSVEDYKVALKEAGFGDEEFGFNVYYGIIAALLSSVSSSNVRTNFGLAYLKNPWCSI*