AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025730.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025730.01.T01 MTR_5g033500 99.007 403 4 0 1 403 1 403 0.0 822
MsG0580025730.01.T01 MTR_8g069565 92.556 403 30 0 1 403 1 403 0.0 787
MsG0580025730.01.T01 MTR_5g033500 100.000 307 0 0 1 307 1 307 0.0 633
MsG0580025730.01.T01 MTR_5g014330 41.849 411 222 6 1 397 1 408 2.80e-108 327
MsG0580025730.01.T01 MTR_5g014330 41.304 414 216 7 1 400 1 401 8.60e-105 317
MsG0580025730.01.T01 MTR_3g112190 32.126 414 258 7 6 399 3 413 2.08e-70 229
MsG0580025730.01.T01 MTR_5g066050 32.235 425 252 9 6 399 3 422 2.46e-68 224
MsG0580025730.01.T01 MTR_5g066050 32.311 424 252 9 6 399 3 421 3.66e-68 223
MsG0580025730.01.T01 MTR_7g111870 27.246 334 193 6 7 318 4 309 5.94e-42 151
MsG0580025730.01.T01 MTR_7g111870 25.481 416 248 10 7 397 4 382 1.01e-41 152
MsG0580025730.01.T01 MTR_3g452810 78.788 66 13 1 49 113 19 84 3.17e-26 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025730.01.T01 AT1G60780 88.337 403 47 0 1 403 1 403 0.0 763
MsG0580025730.01.T01 AT1G10730 83.871 403 65 0 1 403 1 403 0.0 726
MsG0580025730.01.T01 AT5G46630 42.336 411 220 6 1 397 1 408 5.22e-112 336
MsG0580025730.01.T01 AT5G46630 41.849 411 222 5 1 397 1 408 9.60e-112 335
MsG0580025730.01.T01 AT4G24550 30.516 426 257 7 6 399 4 422 2.28e-71 232
MsG0580025730.01.T01 AT4G24550 31.953 338 206 4 6 320 4 340 2.24e-63 209
MsG0580025730.01.T01 AT4G24550 31.953 338 206 4 6 320 4 340 2.40e-63 209
MsG0580025730.01.T01 AT1G56590 26.173 405 263 9 7 397 4 386 1.29e-41 152

Find 99 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCTTCCACCCAAATTAA+AGG 0.175025 5:-23291966 None:intergenic
TTCAGGTTAAGCCTTTAATT+TGG 0.191238 5:+23291955 MsG0580025730.01.T01:intron
AAAGAGTCGGATTGAAATTA+TGG 0.266135 5:+23292004 MsG0580025730.01.T01:CDS
TGCTTCCTCATCTGTTATAC+TGG 0.267401 5:-23292496 None:intergenic
AAAAGCTAGGAGTCAGTTTA+AGG 0.275911 5:+23292028 MsG0580025730.01.T01:CDS
TGAGCTACTTGATGAAATTA+TGG 0.307055 5:+23289881 MsG0580025730.01.T01:CDS
TCAGGTTAAGCCTTTAATTT+GGG 0.308649 5:+23291956 MsG0580025730.01.T01:intron
CCCATTGACGTTCGAACATT+AGG 0.309842 5:-23292274 None:intergenic
AATATAAGAAAATCATGTTT+TGG 0.326415 5:-23292596 None:intergenic
TAATTAGATCTGACGTTGTT+GGG 0.329471 5:+23290206 MsG0580025730.01.T01:CDS
TCGGTGGATTGGATCGGATT+TGG 0.331185 5:-23289062 None:intergenic
CACCAAACTCATCGATAAAC+AGG 0.401786 5:+23289210 MsG0580025730.01.T01:CDS
TTAGGATTGGTTGCATCAAC+AGG 0.412796 5:-23292256 None:intergenic
CTTGATGAAATTATGGACTT+TGG 0.414029 5:+23289888 MsG0580025730.01.T01:CDS
TCAAAGGCCGCATCCTCGTC+TGG 0.420613 5:+23289140 MsG0580025730.01.T01:CDS
TAAGACTGATGCTTATAGAA+TGG 0.429934 5:+23289953 MsG0580025730.01.T01:CDS
AAATGATAGAGTGTTATTAG+AGG 0.432015 5:+23291537 MsG0580025730.01.T01:CDS
ATCTCAAATTTCACGCGTAT+AGG 0.434573 5:-23292537 None:intergenic
TCCTAATGTTCGAACGTCAA+TGG 0.438449 5:+23292273 MsG0580025730.01.T01:CDS
AATTGGAAGAGGAATCGCTT+AGG 0.448944 5:+23289603 MsG0580025730.01.T01:CDS
TGGAAAATTCGATCCTTCCC+TGG 0.461482 5:+23292334 MsG0580025730.01.T01:CDS
TTGGTTGCATCAACAGGAAC+AGG 0.463558 5:-23292250 None:intergenic
CCTAATGTTCGAACGTCAAT+GGG 0.466244 5:+23292274 MsG0580025730.01.T01:CDS
CGTTCGATTTGATGACATAC+AGG 0.467708 5:+23291808 MsG0580025730.01.T01:CDS
TCTTATATTCTAAATGTTGG+AGG 0.470004 5:+23292610 MsG0580025730.01.T01:CDS
ATCTTTGCCTCGGTATATTG+AGG 0.473686 5:-23289915 None:intergenic
TTCGAAGATACCTTGCCTCC+AGG 0.475747 5:-23292352 None:intergenic
TCGGATTTGGAGCAGTGTTA+CGG 0.478612 5:-23289049 None:intergenic
ACCACCGCATCATCAATGTC+AGG 0.484386 5:+23289088 MsG0580025730.01.T01:exon
CAACTCAATCTCGACATTTG+TGG 0.490408 5:-23292227 None:intergenic
TAGGGATAACTTTGTTGTTG+TGG 0.491523 5:+23289622 MsG0580025730.01.T01:CDS
ATTGGAAGAGGAATCGCTTA+GGG 0.493977 5:+23289604 MsG0580025730.01.T01:CDS
GGTATGCCCGAGTGTAAACT+TGG 0.500011 5:+23291511 MsG0580025730.01.T01:CDS
GAGTTTGGTGAAGAAACGTT+CGG 0.502228 5:-23289197 None:intergenic
AGTTACTCAAAGACCTCCTA+TGG 0.508336 5:+23289977 MsG0580025730.01.T01:CDS
ATTTCTTTCATCCCTCCTGA+TGG 0.509512 5:+23291783 MsG0580025730.01.T01:CDS
AACCTGTTTATCGATGAGTT+TGG 0.510129 5:-23289212 None:intergenic
ATCAAATCGAACGATCCATC+AGG 0.513755 5:-23291798 None:intergenic
GAAGAAACGTTCGGCTTCGA+TGG 0.521450 5:-23289188 None:intergenic
ATTCCAGAAACAGTAAAATA+CGG 0.525326 5:-23292561 None:intergenic
CTCACTTAAAATCTTTGCCT+CGG 0.525393 5:-23289925 None:intergenic
GCGGTGGTTGATCGGTGGAT+TGG 0.526014 5:-23289073 None:intergenic
TGACGTTCGAACATTAGGAT+TGG 0.528631 5:-23292269 None:intergenic
TTAATTAGATCTGACGTTGT+TGG 0.530637 5:+23290205 MsG0580025730.01.T01:CDS
AATATTCTTGTCAATAGCAA+TGG 0.531888 5:+23290178 MsG0580025730.01.T01:CDS
GCCGTGTCTTGGCGAAGTGA+AGG 0.532758 5:+23290011 MsG0580025730.01.T01:CDS
CAGACAGAGGCATTGAATGA+AGG 0.535231 5:-23292663 None:intergenic
CAAGGGAAAAGCGATAGACT+TGG 0.539799 5:+23291576 MsG0580025730.01.T01:CDS
ACACCGTTATCATATACAAC+CGG 0.541052 5:-23289352 None:intergenic
TTGAAATTATGGTAAAAGCT+AGG 0.542366 5:+23292015 MsG0580025730.01.T01:CDS
TTTATGAAGGTGTGTCCGGT+TGG 0.542485 5:+23291737 MsG0580025730.01.T01:intron
TGATGAACAATCTCAAGATC+CGG 0.542836 5:+23289333 MsG0580025730.01.T01:CDS
GGTTAAGCCTTTAATTTGGG+TGG 0.544300 5:+23291959 MsG0580025730.01.T01:intron
CTGTTCCTCCTCGACATCAA+AGG 0.548111 5:+23289124 MsG0580025730.01.T01:CDS
GATCCGGTTGTATATGATAA+CGG 0.551593 5:+23289349 MsG0580025730.01.T01:CDS
CCCTTCACTTCGCCAAGACA+CGG 0.551825 5:-23290012 None:intergenic
CGCGGTAGTCACGCCAGACG+AGG 0.552252 5:-23289153 None:intergenic
AATTAGATCTGACGTTGTTG+GGG 0.553267 5:+23290207 MsG0580025730.01.T01:CDS
ATTTAAACCAAGTTTACACT+CGG 0.555581 5:-23291518 None:intergenic
TTGGAGCAGTGTTACGGTGG+TGG 0.559063 5:-23289043 None:intergenic
CCGTGTCTTGGCGAAGTGAA+GGG 0.561959 5:+23290012 MsG0580025730.01.T01:CDS
TCGAAGATACCTTGCCTCCA+GGG 0.564558 5:-23292351 None:intergenic
TTGATGATGCGGTGGTTGAT+CGG 0.567883 5:-23289081 None:intergenic
TCGATCCTTCCCTGGAGGCA+AGG 0.573782 5:+23292342 MsG0580025730.01.T01:CDS
GGTTGATCGGTGGATTGGAT+CGG 0.575156 5:-23289068 None:intergenic
TTGAAAAGCACTCAAAGAGT+CGG 0.576501 5:+23291991 MsG0580025730.01.T01:CDS
GACATACAGGCTCAGTACAC+AGG 0.577294 5:+23291821 MsG0580025730.01.T01:CDS
CCTCATCTGTTATACTGGGA+AGG 0.577347 5:-23292491 None:intergenic
AGATACCTTGCCTCCAGGGA+AGG 0.578555 5:-23292347 None:intergenic
GGCACAAGGCAGAACAACCA+AGG 0.585733 5:+23291558 MsG0580025730.01.T01:CDS
AGTCACGCCAGACGAGGATG+CGG 0.585775 5:-23289147 None:intergenic
GCACAAGGCAGAACAACCAA+GGG 0.590241 5:+23291559 MsG0580025730.01.T01:CDS
GCATTAGTCACTGCCATAGG+AGG 0.590936 5:-23289990 None:intergenic
CCACCGCATCATCAATGTCA+GGG 0.593019 5:+23289089 MsG0580025730.01.T01:exon
ACGGCATTAGTCACTGCCAT+AGG 0.595173 5:-23289993 None:intergenic
GCTTCCTCATCTGTTATACT+GGG 0.596982 5:-23292495 None:intergenic
ATGATGCGGTGGTTGATCGG+TGG 0.601666 5:-23289078 None:intergenic
AAATCGAACGATCCATCAGG+AGG 0.615509 5:-23291795 None:intergenic
CCCTGACATTGATGATGCGG+TGG 0.617425 5:-23289089 None:intergenic
GAAACGTTCGGCTTCGATGG+CGG 0.623972 5:-23289185 None:intergenic
CAGTGACTAATGCCGTGTCT+TGG 0.625555 5:+23290000 MsG0580025730.01.T01:CDS
CCTTCCCAGTATAACAGATG+AGG 0.630177 5:+23292491 MsG0580025730.01.T01:CDS
GGATGCGGCCTTTGATGTCG+AGG 0.631816 5:-23289132 None:intergenic
AATAACTAGTTTCCTCGCGG+TGG 0.633521 5:+23288980 MsG0580025730.01.T01:five_prime_UTR
TGCCCCTGACATTGATGATG+CGG 0.635315 5:-23289092 None:intergenic
TTTAAACCAAGTTTACACTC+GGG 0.636655 5:-23291517 None:intergenic
TTCAATAACTAGTTTCCTCG+CGG 0.655725 5:+23288977 MsG0580025730.01.T01:five_prime_UTR
GATTTGGAGCAGTGTTACGG+TGG 0.661435 5:-23289046 None:intergenic
CACCGCATCATCAATGTCAG+GGG 0.662861 5:+23289090 MsG0580025730.01.T01:exon
CTCGTCTGGCGTGACTACCG+CGG 0.677454 5:+23289154 MsG0580025730.01.T01:CDS
GGAGTCAGTTTAAGGAACGT+AGG 0.677567 5:+23292036 MsG0580025730.01.T01:CDS
TGCGGCCTTTGATGTCGAGG+AGG 0.677780 5:-23289129 None:intergenic
TGGTTATCCTCAATATACCG+AGG 0.679386 5:+23289908 MsG0580025730.01.T01:CDS
AATCGAACGATCCATCAGGA+GGG 0.687261 5:-23291794 None:intergenic
ACGAAGTCGTTGCCACCGCG+AGG 0.687835 5:-23288992 None:intergenic
AAAATTCGATCCTTCCCTGG+AGG 0.705831 5:+23292337 MsG0580025730.01.T01:CDS
AGAGTGTTATTAGAGGCACA+AGG 0.715426 5:+23291544 MsG0580025730.01.T01:CDS
CGATGGCGGAGACGTCGCCG+CGG 0.726811 5:-23289171 None:intergenic
GTGGTGAATGAAGACGACGA+CGG 0.769312 5:-23289024 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGTATATAAAATTTCAT+GGG - Chr5:23291124-23291143 None:intergenic 10.0%
!!! ATTTTTTTTAAAAAACTGTT+TGG - Chr5:23291201-23291220 None:intergenic 10.0%
!!! TAAAAGTATATAAAATTTCA+TGG - Chr5:23291125-23291144 None:intergenic 10.0%
!!! TTTTTCTTTATTTTTTTTCT+TGG + Chr5:23292088-23292107 MsG0580025730.01.T01:intron 10.0%
!! AAAAAAAAAATTAGGAACAT+AGG - Chr5:23290542-23290561 None:intergenic 15.0%
!! ATAAAATAAATCCTATTAGT+TGG - Chr5:23292200-23292219 None:intergenic 15.0%
!! GTTTCTTCAAAAAAAAAATT+AGG - Chr5:23290550-23290569 None:intergenic 15.0%
!! TCAAATTATACATAAAATCA+CGG - Chr5:23289285-23289304 None:intergenic 15.0%
!! TGTATAAATAGAAGAATATA+TGG + Chr5:23290435-23290454 MsG0580025730.01.T01:intron 15.0%
!! TTCTATTAAATCTAATTTCT+GGG + Chr5:23290596-23290615 MsG0580025730.01.T01:intron 15.0%
!! TTTCTATTAAATCTAATTTC+TGG + Chr5:23290595-23290614 MsG0580025730.01.T01:intron 15.0%
!!! AAGTTTAAAATTTACATTTC+TGG + Chr5:23290940-23290959 MsG0580025730.01.T01:intron 15.0%
!!! AATATAAGAAAATCATGTTT+TGG - Chr5:23292599-23292618 None:intergenic 15.0%
!!! AGTTTAAAATTTACATTTCT+GGG + Chr5:23290941-23290960 MsG0580025730.01.T01:intron 15.0%
!!! TATTGTGTTGTTTTAATTTT+TGG + Chr5:23289831-23289850 MsG0580025730.01.T01:intron 15.0%
!!! TTTTCTTATATTCTAAATGT+TGG + Chr5:23292607-23292626 MsG0580025730.01.T01:CDS 15.0%
!! AAATATATAAGAATCAGCTT+AGG - Chr5:23290748-23290767 None:intergenic 20.0%
!! ATCAAATTTAGGTATCAAAA+TGG - Chr5:23292402-23292421 None:intergenic 20.0%
!! GATTAATCACAATCAAATTT+AGG - Chr5:23292413-23292432 None:intergenic 20.0%
!! TAACTTGGGAATAATTTAAT+GGG - Chr5:23291082-23291101 None:intergenic 20.0%
!! TATGTTTATGTGTTGTAATT+TGG + Chr5:23290085-23290104 MsG0580025730.01.T01:intron 20.0%
!! TTAAATTATTCCCAAGTTAA+AGG + Chr5:23291083-23291102 MsG0580025730.01.T01:intron 20.0%
!! TTTCAGATTTAAAAAGCTTA+TGG - Chr5:23288953-23288972 None:intergenic 20.0%
!!! ACTTTTCTATTTTTGTATTC+AGG + Chr5:23290129-23290148 MsG0580025730.01.T01:intron 20.0%
!!! GTTGTTTTAATTTTTGGATT+TGG + Chr5:23289837-23289856 MsG0580025730.01.T01:intron 20.0%
!!! GTTTTTTAAAAAAAATACCC+AGG + Chr5:23291205-23291224 MsG0580025730.01.T01:intron 20.0%
!!! TAAGCATTATTTTGAAGAAT+TGG + Chr5:23289586-23289605 MsG0580025730.01.T01:CDS 20.0%
!!! TTAACTTGGGAATAATTTAA+TGG - Chr5:23291083-23291102 None:intergenic 20.0%
! AACGATATACATTAGAGATT+AGG + Chr5:23290714-23290733 MsG0580025730.01.T01:intron 25.0%
! AATATTCTTGTCAATAGCAA+TGG + Chr5:23290178-23290197 MsG0580025730.01.T01:CDS 25.0%
! AATGAGGTAGTTATTATTAG+AGG + Chr5:23290050-23290069 MsG0580025730.01.T01:intron 25.0%
! ACGATATACATTAGAGATTA+GGG + Chr5:23290715-23290734 MsG0580025730.01.T01:intron 25.0%
! ATAGAAGAATATATGGATAG+AGG + Chr5:23290442-23290461 MsG0580025730.01.T01:intron 25.0%
! ATATAATGTTGAACTCTAAG+TGG - Chr5:23291658-23291677 None:intergenic 25.0%
! ATATTGATATGTGTGGTTAT+TGG + Chr5:23290681-23290700 MsG0580025730.01.T01:intron 25.0%
! ATTCCAGAAACAGTAAAATA+CGG - Chr5:23292564-23292583 None:intergenic 25.0%
! ATTGAGAAATCATTATTCCT+GGG + Chr5:23291009-23291028 MsG0580025730.01.T01:intron 25.0%
! ATTTAAACCAAGTTTACACT+CGG - Chr5:23291521-23291540 None:intergenic 25.0%
! CCTTATTCTATAACATATCA+CGG - Chr5:23290357-23290376 None:intergenic 25.0%
! CGTGATATGTTATAGAATAA+GGG + Chr5:23290355-23290374 MsG0580025730.01.T01:intron 25.0%
! GAATAATTTAATGGGAATGA+TGG - Chr5:23291074-23291093 None:intergenic 25.0%
! GATAAGTTACAAGAAAAATG+AGG + Chr5:23290034-23290053 MsG0580025730.01.T01:CDS 25.0%
! GCTCAAAAATTATTATTCCT+AGG - Chr5:23291269-23291288 None:intergenic 25.0%
! TATAATGTTGAACTCTAAGT+GGG - Chr5:23291657-23291676 None:intergenic 25.0%
! TATCAAAATGGATGTTATTG+AGG - Chr5:23292390-23292409 None:intergenic 25.0%
! TCTTATATTCTAAATGTTGG+AGG + Chr5:23292610-23292629 MsG0580025730.01.T01:CDS 25.0%
! TGATTGTGATTAATCAGATT+GGG + Chr5:23292418-23292437 MsG0580025730.01.T01:intron 25.0%
! TGCAAATGAAATTAGCAATT+TGG + Chr5:23290827-23290846 MsG0580025730.01.T01:intron 25.0%
! TTGAAATTATGGTAAAAGCT+AGG + Chr5:23292015-23292034 MsG0580025730.01.T01:CDS 25.0%
! TTGAATATTCCTAGGAAAAT+TGG - Chr5:23291171-23291190 None:intergenic 25.0%
! TTGATTGTGATTAATCAGAT+TGG + Chr5:23292417-23292436 MsG0580025730.01.T01:intron 25.0%
!! AAATAACTTCCAATTTTCCT+AGG + Chr5:23291159-23291178 MsG0580025730.01.T01:intron 25.0%
!! AAATGATAGAGTGTTATTAG+AGG + Chr5:23291537-23291556 MsG0580025730.01.T01:CDS 25.0%
!!! ACAATCTGTTTTTGACTTTT+TGG + Chr5:23290625-23290644 MsG0580025730.01.T01:intron 25.0%
!!! TAATAAGTTTCTGTTTTGAG+AGG + Chr5:23291863-23291882 MsG0580025730.01.T01:intron 25.0%
!!! TTATTTTGAAGAATTGGAAG+AGG + Chr5:23289592-23289611 MsG0580025730.01.T01:CDS 25.0%
!!! TTTTTGTATTCAGGTTTTCT+TGG + Chr5:23290138-23290157 MsG0580025730.01.T01:intron 25.0%
AAAGAGTCGGATTGAAATTA+TGG + Chr5:23292004-23292023 MsG0580025730.01.T01:CDS 30.0%
AAAGTCAAAAACAGATTGTG+AGG - Chr5:23290624-23290643 None:intergenic 30.0%
AAATACTCCATCATGAATGT+TGG - Chr5:23291449-23291468 None:intergenic 30.0%
ACTCCTATGTTCCTAATTAA+TGG + Chr5:23290568-23290587 MsG0580025730.01.T01:intron 30.0%
ATACCCAGGAATATAAAGAA+GGG - Chr5:23291240-23291259 None:intergenic 30.0%
ATTAAACCAATCCATAAGCA+TGG - Chr5:23290889-23290908 None:intergenic 30.0%
ATTATTCCCAAGTTAAAGGA+TGG + Chr5:23291087-23291106 MsG0580025730.01.T01:intron 30.0%
CCGTGATATGTTATAGAATA+AGG + Chr5:23290354-23290373 MsG0580025730.01.T01:intron 30.0%
CTATTAACCAACATTCATGA+TGG + Chr5:23291439-23291458 MsG0580025730.01.T01:intron 30.0%
CTCAATCTTGTAACAAACAT+GGG - Chr5:23290995-23291014 None:intergenic 30.0%
CTCCTATGTTCCTAATTAAT+GGG + Chr5:23290569-23290588 MsG0580025730.01.T01:intron 30.0%
CTTGATGAAATTATGGACTT+TGG + Chr5:23289888-23289907 MsG0580025730.01.T01:CDS 30.0%
GATTGAGAAATCATTATTCC+TGG + Chr5:23291008-23291027 MsG0580025730.01.T01:intron 30.0%
GTTTATGTGTTGTAATTTGG+TGG + Chr5:23290088-23290107 MsG0580025730.01.T01:intron 30.0%
TAAGACTGATGCTTATAGAA+TGG + Chr5:23289953-23289972 MsG0580025730.01.T01:CDS 30.0%
TAATTAGATCTGACGTTGTT+GGG + Chr5:23290206-23290225 MsG0580025730.01.T01:CDS 30.0%
TCTATTGAAGGGAAAACTAT+TGG + Chr5:23290501-23290520 MsG0580025730.01.T01:intron 30.0%
TCTCAATCTTGTAACAAACA+TGG - Chr5:23290996-23291015 None:intergenic 30.0%
TGAAATTAGCAATTTGGACT+TGG + Chr5:23290833-23290852 MsG0580025730.01.T01:intron 30.0%
TGAGCTACTTGATGAAATTA+TGG + Chr5:23289881-23289900 MsG0580025730.01.T01:CDS 30.0%
TGGTGAAACAAGGATATTTA+GGG - Chr5:23292180-23292199 None:intergenic 30.0%
TTAATTAGATCTGACGTTGT+TGG + Chr5:23290205-23290224 MsG0580025730.01.T01:CDS 30.0%
TTATACATAAAATCACGGTG+TGG - Chr5:23289280-23289299 None:intergenic 30.0%
TTATTCCCAAGTTAAAGGAT+GGG + Chr5:23291088-23291107 MsG0580025730.01.T01:intron 30.0%
TTGGTGAAACAAGGATATTT+AGG - Chr5:23292181-23292200 None:intergenic 30.0%
TTGTATCTAGCTGAAATTTG+AGG + Chr5:23290802-23290821 MsG0580025730.01.T01:intron 30.0%
TTTAAACCAAGTTTACACTC+GGG - Chr5:23291520-23291539 None:intergenic 30.0%
TTTAATCAGCTAGTACACTT+GGG + Chr5:23290903-23290922 MsG0580025730.01.T01:intron 30.0%
! ATACCGTATTTTACTGTTTC+TGG + Chr5:23292558-23292577 MsG0580025730.01.T01:CDS 30.0%
! GATTGCAACATACAGTTTTA+TGG + Chr5:23290328-23290347 MsG0580025730.01.T01:intron 30.0%
! TCAGGTTAAGCCTTTAATTT+GGG + Chr5:23291956-23291975 MsG0580025730.01.T01:intron 30.0%
! TGAAAACTGACATGTGTTTT+TGG + Chr5:23291472-23291491 MsG0580025730.01.T01:intron 30.0%
! TGAAGATGAGAACATTTTTG+AGG + Chr5:23290233-23290252 MsG0580025730.01.T01:CDS 30.0%
! TTACATTTCTGGGAATACAT+GGG + Chr5:23290951-23290970 MsG0580025730.01.T01:intron 30.0%
! TTATGTCTGGCATTTTATGA+AGG + Chr5:23291724-23291743 MsG0580025730.01.T01:intron 30.0%
! TTCAGGTTAAGCCTTTAATT+TGG + Chr5:23291955-23291974 MsG0580025730.01.T01:intron 30.0%
! TTTACATTTCTGGGAATACA+TGG + Chr5:23290950-23290969 MsG0580025730.01.T01:intron 30.0%
!! ATAGAAAGCACCCATTAATT+AGG - Chr5:23290582-23290601 None:intergenic 30.0%
!! CAATTTTCGCTTTTCTTGTT+AGG + Chr5:23289309-23289328 MsG0580025730.01.T01:intron 30.0%
!! GCTAGTTCTAAAATTATGTC+TGG + Chr5:23291711-23291730 MsG0580025730.01.T01:intron 30.0%
!! TGTTAGAGAAGTTTGTTAGT+TGG + Chr5:23290398-23290417 MsG0580025730.01.T01:intron 30.0%
!!! AGGCTATTTTTTTCTGCATT+GGG + Chr5:23292630-23292649 MsG0580025730.01.T01:CDS 30.0%
!!! TTTTACTGTTTCTGGAATAC+AGG + Chr5:23292566-23292585 MsG0580025730.01.T01:CDS 30.0%
!!! TTTTGAGATCATCTAGCTTT+TGG + Chr5:23290301-23290320 MsG0580025730.01.T01:intron 30.0%
!!! TTTTTTCTTGGCAGAAGATT+GGG + Chr5:23292100-23292119 MsG0580025730.01.T01:intron 30.0%
!!! TTTTTTTCTTGGCAGAAGAT+TGG + Chr5:23292099-23292118 MsG0580025730.01.T01:intron 30.0%
AAAAGCTAGGAGTCAGTTTA+AGG + Chr5:23292028-23292047 MsG0580025730.01.T01:CDS 35.0%
AACCTGTTTATCGATGAGTT+TGG - Chr5:23289215-23289234 None:intergenic 35.0%
AACTCCCTTCTTTATATTCC+TGG + Chr5:23291233-23291252 MsG0580025730.01.T01:intron 35.0%
AAGATACGGTACAATCAACA+AGG - Chr5:23291935-23291954 None:intergenic 35.0%
AAGGGTAATTAGAGTAGTTC+AGG + Chr5:23290373-23290392 MsG0580025730.01.T01:intron 35.0%
AAGTTAAAGGATGGGAAAGT+GGG + Chr5:23291096-23291115 MsG0580025730.01.T01:intron 35.0%
AATCCATAAGCATGGAGAAT+CGG - Chr5:23290881-23290900 None:intergenic 35.0%
AATTAGATCTGACGTTGTTG+GGG + Chr5:23290207-23290226 MsG0580025730.01.T01:CDS 35.0%
ACACCGTTATCATATACAAC+CGG - Chr5:23289355-23289374 None:intergenic 35.0%
ACTAACGTTAGTGTTGTGTT+TGG - Chr5:23289695-23289714 None:intergenic 35.0%
ACTCCCTTCTTTATATTCCT+GGG + Chr5:23291234-23291253 MsG0580025730.01.T01:intron 35.0%
AGAGTAGTGACTCTATTGAA+GGG + Chr5:23290490-23290509 MsG0580025730.01.T01:intron 35.0%
AGGCTTAACCTGAAAAGATA+CGG - Chr5:23291949-23291968 None:intergenic 35.0%
AGGGTAATTAGAGTAGTTCA+GGG + Chr5:23290374-23290393 MsG0580025730.01.T01:intron 35.0%
AGGTCGGTAATTCTGAATAA+TGG + Chr5:23291325-23291344 MsG0580025730.01.T01:intron 35.0%
ATCATTATTCCTGGGTATCA+AGG + Chr5:23291017-23291036 MsG0580025730.01.T01:intron 35.0%
ATCTCAAATTTCACGCGTAT+AGG - Chr5:23292540-23292559 None:intergenic 35.0%
CACCCATTAATTAGGAACAT+AGG - Chr5:23290574-23290593 None:intergenic 35.0%
CATACCCAGGAATATAAAGA+AGG - Chr5:23291241-23291260 None:intergenic 35.0%
CTCACTTAAAATCTTTGCCT+CGG - Chr5:23289928-23289947 None:intergenic 35.0%
CTCCTTTCTTTGATACTTTC+AGG + Chr5:23292443-23292462 MsG0580025730.01.T01:intron 35.0%
GATCCGGTTGTATATGATAA+CGG + Chr5:23289349-23289368 MsG0580025730.01.T01:CDS 35.0%
GCTATCTGCAAAATATCTAC+CGG - Chr5:23291371-23291390 None:intergenic 35.0%
GTTTAATCAGCTAGTACACT+TGG + Chr5:23290902-23290921 MsG0580025730.01.T01:intron 35.0%
TAGAGTAGTGACTCTATTGA+AGG + Chr5:23290489-23290508 MsG0580025730.01.T01:intron 35.0%
TATAAGAATCAGCTTAGGCT+TGG - Chr5:23290743-23290762 None:intergenic 35.0%
TCAAAATGCTTTCTCTCTGT+GGG - Chr5:23291909-23291928 None:intergenic 35.0%
TGATGAACAATCTCAAGATC+CGG + Chr5:23289333-23289352 MsG0580025730.01.T01:CDS 35.0%
TTAATCAGCTAGTACACTTG+GGG + Chr5:23290904-23290923 MsG0580025730.01.T01:intron 35.0%
TTCAAAATGCTTTCTCTCTG+TGG - Chr5:23291910-23291929 None:intergenic 35.0%
TTGAGATCTACTGCATTTGT+AGG + Chr5:23290273-23290292 MsG0580025730.01.T01:intron 35.0%
TTGGATTTGGATCTGAGAAA+TGG - Chr5:23289248-23289267 None:intergenic 35.0%
TTTGCTTCCACCCAAATTAA+AGG - Chr5:23291969-23291988 None:intergenic 35.0%
TTTGGCATATTCTAATGCAG+TGG + Chr5:23291490-23291509 MsG0580025730.01.T01:intron 35.0%
! AATGGGAATGATGGAAGTTA+TGG - Chr5:23291065-23291084 None:intergenic 35.0%
! ACTTTCCCATCCTTTAACTT+GGG - Chr5:23291096-23291115 None:intergenic 35.0%
! ATGGGAAGTTATTTCATTCC+TGG - Chr5:23291046-23291065 None:intergenic 35.0%
! ATGGGAATGATGGAAGTTAT+GGG - Chr5:23291064-23291083 None:intergenic 35.0%
! ATTTAGGGCAGTCTAAATTC+TGG - Chr5:23292165-23292184 None:intergenic 35.0%
! CAGATCAATGCATCTTTTTC+AGG - Chr5:23292316-23292335 None:intergenic 35.0%
! CATATCTGTCAATTTTCTGC+CGG + Chr5:23291349-23291368 MsG0580025730.01.T01:intron 35.0%
! CTGAAAAAGATGCATTGATC+TGG + Chr5:23292314-23292333 MsG0580025730.01.T01:CDS 35.0%
! TCCTTGTTTCACCAACTAAT+AGG + Chr5:23292186-23292205 MsG0580025730.01.T01:intron 35.0%
! TGATTGTACCGTATCTTTTC+AGG + Chr5:23291938-23291957 MsG0580025730.01.T01:intron 35.0%
! TGGGAAGTTATTTCATTCCT+GGG - Chr5:23291045-23291064 None:intergenic 35.0%
! TGTTGTAATTTGGTGGTTTG+AGG + Chr5:23290095-23290114 MsG0580025730.01.T01:intron 35.0%
! TTCAATAACTAGTTTCCTCG+CGG + Chr5:23288977-23288996 MsG0580025730.01.T01:five_prime_UTR 35.0%
! TTTAGGGCAGTCTAAATTCT+GGG - Chr5:23292164-23292183 None:intergenic 35.0%
! TTTTTCTTGGCAGAAGATTG+GGG + Chr5:23292101-23292120 MsG0580025730.01.T01:intron 35.0%
!! CTCCTGAAAGTATCAAAGAA+AGG - Chr5:23292448-23292467 None:intergenic 35.0%
!! TAGGGATAACTTTGTTGTTG+TGG + Chr5:23289622-23289641 MsG0580025730.01.T01:CDS 35.0%
!! TATTCAGGTTTTCTTGGATG+TGG + Chr5:23290144-23290163 MsG0580025730.01.T01:intron 35.0%
!! TCCTATTAGTTGGTGAAACA+AGG - Chr5:23292190-23292209 None:intergenic 35.0%
!! TTGAAAAGCACTCAAAGAGT+CGG + Chr5:23291991-23292010 MsG0580025730.01.T01:CDS 35.0%
!!! AAAGAAGGGAGTTTTATTCC+TGG - Chr5:23291226-23291245 None:intergenic 35.0%
!!! AAGAAGGGAGTTTTATTCCT+GGG - Chr5:23291225-23291244 None:intergenic 35.0%
!!! ATTCGTGTGTTTTTTCTTGC+AGG + Chr5:23289559-23289578 MsG0580025730.01.T01:intron 35.0%
!!! GAGGCTATTTTTTTCTGCAT+TGG + Chr5:23292629-23292648 MsG0580025730.01.T01:CDS 35.0%
!!! TAAGTTTCTGTTTTGAGAGG+TGG + Chr5:23291866-23291885 MsG0580025730.01.T01:intron 35.0%
AATTGGAAGAGGAATCGCTT+AGG + Chr5:23289603-23289622 MsG0580025730.01.T01:CDS 40.0%
ACCTCACTGCGTGAATTAAA+AGG - Chr5:23292135-23292154 None:intergenic 40.0%
AGTTACTCAAAGACCTCCTA+TGG + Chr5:23289977-23289996 MsG0580025730.01.T01:CDS 40.0%
ATACTTGTCTTGTCGATGTC+TGG + Chr5:23289750-23289769 MsG0580025730.01.T01:intron 40.0%
ATATGTGTGGTTATTGGCGA+GGG + Chr5:23290687-23290706 MsG0580025730.01.T01:intron 40.0%
ATCAAATCGAACGATCCATC+AGG - Chr5:23291801-23291820 None:intergenic 40.0%
ATCTTTGCCTCGGTATATTG+AGG - Chr5:23289918-23289937 None:intergenic 40.0%
ATTGGAAGAGGAATCGCTTA+GGG + Chr5:23289604-23289623 MsG0580025730.01.T01:CDS 40.0%
ATTTCTTTCATCCCTCCTGA+TGG + Chr5:23291783-23291802 MsG0580025730.01.T01:CDS 40.0%
CAACTCAATCTCGACATTTG+TGG - Chr5:23292230-23292249 None:intergenic 40.0%
CAAGTTAAAGGATGGGAAAG+TGG + Chr5:23291095-23291114 MsG0580025730.01.T01:intron 40.0%
CACCAAACTCATCGATAAAC+AGG + Chr5:23289210-23289229 MsG0580025730.01.T01:CDS 40.0%
CACTTTCCCATCCTTTAACT+TGG - Chr5:23291097-23291116 None:intergenic 40.0%
CCTAATGTTCGAACGTCAAT+GGG + Chr5:23292274-23292293 MsG0580025730.01.T01:CDS 40.0%
GATTCTCCATGCTTATGGAT+TGG + Chr5:23290880-23290899 MsG0580025730.01.T01:intron 40.0%
GCACACTCTTGAATATTCCT+AGG - Chr5:23291179-23291198 None:intergenic 40.0%
GCTTCCTCATCTGTTATACT+GGG - Chr5:23292498-23292517 None:intergenic 40.0%
GTGGAGTGTGAATTTGGATT+TGG - Chr5:23289261-23289280 None:intergenic 40.0%
TAATCAGCTAGTACACTTGG+GGG + Chr5:23290905-23290924 MsG0580025730.01.T01:intron 40.0%
TACTTGTCTTGTCGATGTCT+GGG + Chr5:23289751-23289770 MsG0580025730.01.T01:intron 40.0%
TCAGCTGTGAATGTATACAG+TGG - Chr5:23291399-23291418 None:intergenic 40.0%
TCCTAATGTTCGAACGTCAA+TGG + Chr5:23292273-23292292 MsG0580025730.01.T01:CDS 40.0%
TGACGTTCGAACATTAGGAT+TGG - Chr5:23292272-23292291 None:intergenic 40.0%
TGCTTCCTCATCTGTTATAC+TGG - Chr5:23292499-23292518 None:intergenic 40.0%
TGGTTATCCTCAATATACCG+AGG + Chr5:23289908-23289927 MsG0580025730.01.T01:CDS 40.0%
TTGGATCTGAGAAATGGAAG+TGG - Chr5:23289242-23289261 None:intergenic 40.0%
! AGAGTGTTATTAGAGGCACA+AGG + Chr5:23291544-23291563 MsG0580025730.01.T01:CDS 40.0%
! ATTTCTGGGAATACATGGGT+AGG + Chr5:23290955-23290974 MsG0580025730.01.T01:intron 40.0%
! CATTTTCAAATCGAGCCAAC+CGG - Chr5:23291755-23291774 None:intergenic 40.0%
! CGTATAGGAGCTTTTCTTTC+AGG - Chr5:23292525-23292544 None:intergenic 40.0%
! CGTTCGATTTGATGACATAC+AGG + Chr5:23291808-23291827 MsG0580025730.01.T01:CDS 40.0%
! GAGTTTGGTGAAGAAACGTT+CGG - Chr5:23289200-23289219 None:intergenic 40.0%
! GGAGGGTATATTGATATGTG+TGG + Chr5:23290674-23290693 MsG0580025730.01.T01:intron 40.0%
! TTGGTGTTTCTACTCGTATG+TGG + Chr5:23290644-23290663 MsG0580025730.01.T01:intron 40.0%
! TTTCTGGGAATACATGGGTA+GGG + Chr5:23290956-23290975 MsG0580025730.01.T01:intron 40.0%
!! GCATTTTATGAAGGTGTGTC+CGG + Chr5:23291733-23291752 MsG0580025730.01.T01:intron 40.0%
!! GGTTAAGCCTTTAATTTGGG+TGG + Chr5:23291959-23291978 MsG0580025730.01.T01:intron 40.0%
!! TCCTTTTAATTCACGCAGTG+AGG + Chr5:23292131-23292150 MsG0580025730.01.T01:intron 40.0%
!! TTAGGATTGGTTGCATCAAC+AGG - Chr5:23292259-23292278 None:intergenic 40.0%
AAAATTCGATCCTTCCCTGG+AGG + Chr5:23292337-23292356 MsG0580025730.01.T01:CDS 45.0%
AAATCGAACGATCCATCAGG+AGG - Chr5:23291798-23291817 None:intergenic 45.0%
AATCAGCTAGTACACTTGGG+GGG + Chr5:23290906-23290925 MsG0580025730.01.T01:intron 45.0%
AATCGAACGATCCATCAGGA+GGG - Chr5:23291797-23291816 None:intergenic 45.0%
ACTTGTCTTGTCGATGTCTG+GGG + Chr5:23289752-23289771 MsG0580025730.01.T01:intron 45.0%
CAAGGGAAAAGCGATAGACT+TGG + Chr5:23291576-23291595 MsG0580025730.01.T01:CDS 45.0%
CCCATTGACGTTCGAACATT+AGG - Chr5:23292277-23292296 None:intergenic 45.0%
CCTCATCTGTTATACTGGGA+AGG - Chr5:23292494-23292513 None:intergenic 45.0%
CCTTCCCAGTATAACAGATG+AGG + Chr5:23292491-23292510 MsG0580025730.01.T01:CDS 45.0%
CTACTCGTATGTGGATACTC+TGG + Chr5:23290653-23290672 MsG0580025730.01.T01:intron 45.0%
GATATGTGTGGTTATTGGCG+AGG + Chr5:23290686-23290705 MsG0580025730.01.T01:intron 45.0%
GGAGTCAGTTTAAGGAACGT+AGG + Chr5:23292036-23292055 MsG0580025730.01.T01:CDS 45.0%
TCGTATGTGGATACTCTGGA+GGG + Chr5:23290657-23290676 MsG0580025730.01.T01:intron 45.0%
TGGAAAATTCGATCCTTCCC+TGG + Chr5:23292334-23292353 MsG0580025730.01.T01:CDS 45.0%
TTCCTAGGAACAACATACCC+AGG - Chr5:23291254-23291273 None:intergenic 45.0%
TTCCTGGGTATGTTGTTCCT+AGG + Chr5:23291249-23291268 MsG0580025730.01.T01:intron 45.0%
TTGGTTGCATCAACAGGAAC+AGG - Chr5:23292253-23292272 None:intergenic 45.0%
! AAGCTTTCGGTTGGAAGTGT+TGG + Chr5:23289783-23289802 MsG0580025730.01.T01:intron 45.0%
! AATAACTAGTTTCCTCGCGG+TGG + Chr5:23288980-23288999 MsG0580025730.01.T01:five_prime_UTR 45.0%
! TCAGGTTTTCTTGGATGTGG+TGG + Chr5:23290147-23290166 MsG0580025730.01.T01:intron 45.0%
! TCGGATTTGGAGCAGTGTTA+CGG - Chr5:23289052-23289071 None:intergenic 45.0%
! TTTATGAAGGTGTGTCCGGT+TGG + Chr5:23291737-23291756 MsG0580025730.01.T01:intron 45.0%
!! CAAGTCTATCGCTTTTCCCT+TGG - Chr5:23291578-23291597 None:intergenic 45.0%
!! CAGACAGAGGCATTGAATGA+AGG - Chr5:23292666-23292685 None:intergenic 45.0%
!! GTACCGATTCTCCATGCTTA+TGG + Chr5:23290875-23290894 MsG0580025730.01.T01:intron 45.0%
!! TCGTGGGGGCATTTATTTCA+CGG - Chr5:23291292-23291311 None:intergenic 45.0%
!! TTGATGATGCGGTGGTTGAT+CGG - Chr5:23289084-23289103 None:intergenic 45.0%
!!! ATACTTTTAAAAAAAAAAAA+AGG + Chr5:23291136-23291155 MsG0580025730.01.T01:intron 5.0%
ACCACCGCATCATCAATGTC+AGG + Chr5:23289088-23289107 MsG0580025730.01.T01:exon 50.0%
ACCTCCTAAAGAACACCTCG+TGG - Chr5:23291309-23291328 None:intergenic 50.0%
ACGGCATTAGTCACTGCCAT+AGG - Chr5:23289996-23290015 None:intergenic 50.0%
ATCAGCTAGTACACTTGGGG+GGG + Chr5:23290907-23290926 MsG0580025730.01.T01:intron 50.0%
CACCGCATCATCAATGTCAG+GGG + Chr5:23289090-23289109 MsG0580025730.01.T01:exon 50.0%
CACGGTGTGGAGTGTGAATT+TGG - Chr5:23289267-23289286 None:intergenic 50.0%
CAGTGACTAATGCCGTGTCT+TGG + Chr5:23290000-23290019 MsG0580025730.01.T01:CDS 50.0%
CCACCGCATCATCAATGTCA+GGG + Chr5:23289089-23289108 MsG0580025730.01.T01:exon 50.0%
CCTCCTAAAGAACACCTCGT+GGG - Chr5:23291308-23291327 None:intergenic 50.0%
CTCCTAAAGAACACCTCGTG+GGG - Chr5:23291307-23291326 None:intergenic 50.0%
CTCGTATGTGGATACTCTGG+AGG + Chr5:23290656-23290675 MsG0580025730.01.T01:intron 50.0%
CTGTTCCTCCTCGACATCAA+AGG + Chr5:23289124-23289143 MsG0580025730.01.T01:CDS 50.0%
GAAGAAACGTTCGGCTTCGA+TGG - Chr5:23289191-23289210 None:intergenic 50.0%
GACATACAGGCTCAGTACAC+AGG + Chr5:23291821-23291840 MsG0580025730.01.T01:CDS 50.0%
GCAATGGACAAGCTTTCGGT+TGG + Chr5:23289774-23289793 MsG0580025730.01.T01:intron 50.0%
GCACAAGGCAGAACAACCAA+GGG + Chr5:23291559-23291578 MsG0580025730.01.T01:CDS 50.0%
GCATTAGTCACTGCCATAGG+AGG - Chr5:23289993-23290012 None:intergenic 50.0%
GGTATGCCCGAGTGTAAACT+TGG + Chr5:23291511-23291530 MsG0580025730.01.T01:CDS 50.0%
GTGAAATAAATGCCCCCACG+AGG + Chr5:23291291-23291310 MsG0580025730.01.T01:intron 50.0%
GTGGTGAATGAAGACGACGA+CGG - Chr5:23289027-23289046 None:intergenic 50.0%
TCCTAAAGAACACCTCGTGG+GGG - Chr5:23291306-23291325 None:intergenic 50.0%
TCGAAGATACCTTGCCTCCA+GGG - Chr5:23292354-23292373 None:intergenic 50.0%
TGGGGCAATGGACAAGCTTT+CGG + Chr5:23289770-23289789 MsG0580025730.01.T01:intron 50.0%
TTCGAAGATACCTTGCCTCC+AGG - Chr5:23292355-23292374 None:intergenic 50.0%
! CGAGGTGTTCTTTAGGAGGT+CGG + Chr5:23291309-23291328 MsG0580025730.01.T01:intron 50.0%
! GAGGCAAGGTATCTTCGAAG+TGG + Chr5:23292356-23292375 MsG0580025730.01.T01:intron 50.0%
! GATTTGGAGCAGTGTTACGG+TGG - Chr5:23289049-23289068 None:intergenic 50.0%
!! CGTGGGGGCATTTATTTCAC+GGG - Chr5:23291291-23291310 None:intergenic 50.0%
!! GGTTGATCGGTGGATTGGAT+CGG - Chr5:23289071-23289090 None:intergenic 50.0%
!! TCGGTGGATTGGATCGGATT+TGG - Chr5:23289065-23289084 None:intergenic 50.0%
!! TGCCCCTGACATTGATGATG+CGG - Chr5:23289095-23289114 None:intergenic 50.0%
AGATACCTTGCCTCCAGGGA+AGG - Chr5:23292350-23292369 None:intergenic 55.0%
ATGATGCGGTGGTTGATCGG+TGG - Chr5:23289081-23289100 None:intergenic 55.0%
CCCTTCACTTCGCCAAGACA+CGG - Chr5:23290015-23290034 None:intergenic 55.0%
CCGTGTCTTGGCGAAGTGAA+GGG + Chr5:23290012-23290031 MsG0580025730.01.T01:CDS 55.0%
GAAACGTTCGGCTTCGATGG+CGG - Chr5:23289188-23289207 None:intergenic 55.0%
GGCACAAGGCAGAACAACCA+AGG + Chr5:23291558-23291577 MsG0580025730.01.T01:CDS 55.0%
TCCTGGGAACCTTGATACCC+AGG - Chr5:23291029-23291048 None:intergenic 55.0%
TCCTGGGTATCAAGGTTCCC+AGG + Chr5:23291025-23291044 MsG0580025730.01.T01:intron 55.0%
TTGGAGCAGTGTTACGGTGG+TGG - Chr5:23289046-23289065 None:intergenic 55.0%
! CCCACGAGGTGTTCTTTAGG+AGG + Chr5:23291305-23291324 MsG0580025730.01.T01:intron 55.0%
! CTTGTCGATGTCTGGGGCAA+TGG + Chr5:23289758-23289777 MsG0580025730.01.T01:intron 55.0%
!! CCCTGACATTGATGATGCGG+TGG - Chr5:23289092-23289111 None:intergenic 55.0%
AGTCACGCCAGACGAGGATG+CGG - Chr5:23289150-23289169 None:intergenic 60.0%
GCCGTGTCTTGGCGAAGTGA+AGG + Chr5:23290011-23290030 MsG0580025730.01.T01:CDS 60.0%
GCGGTGGTTGATCGGTGGAT+TGG - Chr5:23289076-23289095 None:intergenic 60.0%
GGATGCGGCCTTTGATGTCG+AGG - Chr5:23289135-23289154 None:intergenic 60.0%
GTGTGGTTATTGGCGAGGGC+TGG + Chr5:23290691-23290710 MsG0580025730.01.T01:intron 60.0%
TCAAAGGCCGCATCCTCGTC+TGG + Chr5:23289140-23289159 MsG0580025730.01.T01:CDS 60.0%
TCGATCCTTCCCTGGAGGCA+AGG + Chr5:23292342-23292361 MsG0580025730.01.T01:CDS 60.0%
TGCGGCCTTTGATGTCGAGG+AGG - Chr5:23289132-23289151 None:intergenic 60.0%
! GCCCCCACGAGGTGTTCTTT+AGG + Chr5:23291302-23291321 MsG0580025730.01.T01:intron 60.0%
ACGAAGTCGTTGCCACCGCG+AGG - Chr5:23288995-23289014 None:intergenic 65.0%
CTCGTCTGGCGTGACTACCG+CGG + Chr5:23289154-23289173 MsG0580025730.01.T01:CDS 65.0%
CGCGGTAGTCACGCCAGACG+AGG - Chr5:23289156-23289175 None:intergenic 70.0%
!! CGATGGCGGAGACGTCGCCG+CGG - Chr5:23289174-23289193 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 23288948 23292686 23288948 ID=MsG0580025730.01;Name=MsG0580025730.01
Chr5 mRNA 23288948 23292686 23288948 ID=MsG0580025730.01.T01;Parent=MsG0580025730.01;Name=MsG0580025730.01.T01;_AED=0.50;_eAED=0.52;_QI=155|1|0.9|1|1|1|10|0|428
Chr5 exon 23288948 23289231 23288948 ID=MsG0580025730.01.T01:exon:4301;Parent=MsG0580025730.01.T01
Chr5 exon 23289331 23289477 23289331 ID=MsG0580025730.01.T01:exon:4302;Parent=MsG0580025730.01.T01
Chr5 exon 23289581 23289643 23289581 ID=MsG0580025730.01.T01:exon:4303;Parent=MsG0580025730.01.T01
Chr5 exon 23289879 23290055 23289879 ID=MsG0580025730.01.T01:exon:4304;Parent=MsG0580025730.01.T01
Chr5 exon 23290151 23290254 23290151 ID=MsG0580025730.01.T01:exon:4305;Parent=MsG0580025730.01.T01
Chr5 exon 23291510 23291617 23291510 ID=MsG0580025730.01.T01:exon:4306;Parent=MsG0580025730.01.T01
Chr5 exon 23291746 23291842 23291746 ID=MsG0580025730.01.T01:exon:4307;Parent=MsG0580025730.01.T01
Chr5 exon 23291960 23292057 23291960 ID=MsG0580025730.01.T01:exon:4308;Parent=MsG0580025730.01.T01
Chr5 exon 23292222 23292363 23292222 ID=MsG0580025730.01.T01:exon:4309;Parent=MsG0580025730.01.T01
Chr5 exon 23292465 23292686 23292465 ID=MsG0580025730.01.T01:exon:4310;Parent=MsG0580025730.01.T01
Chr5 five_prime_UTR 23288948 23289102 23288948 ID=MsG0580025730.01.T01:five_prime_utr;Parent=MsG0580025730.01.T01
Chr5 CDS 23289103 23289231 23289103 ID=MsG0580025730.01.T01:cds;Parent=MsG0580025730.01.T01
Chr5 CDS 23289331 23289477 23289331 ID=MsG0580025730.01.T01:cds;Parent=MsG0580025730.01.T01
Chr5 CDS 23289581 23289643 23289581 ID=MsG0580025730.01.T01:cds;Parent=MsG0580025730.01.T01
Chr5 CDS 23289879 23290055 23289879 ID=MsG0580025730.01.T01:cds;Parent=MsG0580025730.01.T01
Chr5 CDS 23290151 23290254 23290151 ID=MsG0580025730.01.T01:cds;Parent=MsG0580025730.01.T01
Chr5 CDS 23291510 23291617 23291510 ID=MsG0580025730.01.T01:cds;Parent=MsG0580025730.01.T01
Chr5 CDS 23291746 23291842 23291746 ID=MsG0580025730.01.T01:cds;Parent=MsG0580025730.01.T01
Chr5 CDS 23291960 23292057 23291960 ID=MsG0580025730.01.T01:cds;Parent=MsG0580025730.01.T01
Chr5 CDS 23292222 23292363 23292222 ID=MsG0580025730.01.T01:cds;Parent=MsG0580025730.01.T01
Chr5 CDS 23292465 23292686 23292465 ID=MsG0580025730.01.T01:cds;Parent=MsG0580025730.01.T01
Gene Sequence

>MsG0580025730.01.T01

ATGTCAGGGGCAGCTTCTGCTCTGTTCCTCCTCGACATCAAAGGCCGCATCCTCGTCTGGCGTGACTACCGCGGCGACGTCTCCGCCATCGAAGCCGAACGTTTCTTCACCAAACTCATCGATAAACAGGCTGATGAACAATCTCAAGATCCGGTTGTATATGATAACGGTGTTACGTATATGTTTATTCAACATAGCAATGTTTATCTTGTGATCGCTGCGAGACAAAATTGTAATGCAGCTAGTCTTCTATTCTTCTTGCATCGATTAGTTGATGTGTTTAAGCATTATTTTGAAGAATTGGAAGAGGAATCGCTTAGGGATAACTTTGTTGTTGTGTATGAGCTACTTGATGAAATTATGGACTTTGGTTATCCTCAATATACCGAGGCAAAGATTTTAAGTGAGTTTATTAAGACTGATGCTTATAGAATGGAAGTTACTCAAAGACCTCCTATGGCAGTGACTAATGCCGTGTCTTGGCGAAGTGAAGGGATAAGTTACAAGAAAAATGAGGTTTTCTTGGATGTGGTGGAGAGTGTTAATATTCTTGTCAATAGCAATGGACAGTTAATTAGATCTGACGTTGTTGGGGCACTGAAGATGAGAACATTTTTGAGTGGTATGCCCGAGTGTAAACTTGGTTTAAATGATAGAGTGTTATTAGAGGCACAAGGCAGAACAACCAAGGGAAAAGCGATAGACTTGGAAGACATTAAATTTCATCAGTGTGTCCGGTTGGCTCGATTTGAAAATGATCGAACTATTTCTTTCATCCCTCCTGATGGATCGTTCGATTTGATGACATACAGGCTCAGTACACAGGTTAAGCCTTTAATTTGGGTGGAAGCAAATGTTGAAAAGCACTCAAAGAGTCGGATTGAAATTATGGTAAAAGCTAGGAGTCAGTTTAAGGAACGTAGCACTGCCACAAATGTCGAGATTGAGTTGCCTGTTCCTGTTGATGCAACCAATCCTAATGTTCGAACGTCAATGGGATCTGCATCATATGCACCTGAAAAAGATGCATTGATCTGGAAAATTCGATCCTTCCCTGGAGGCAAGGAGTATATGTTAAGAGCAGAGTTTCGCCTTCCCAGTATAACAGATGAGGAAGCAGCTCCTGAAAGAAAAGCTCCTATACGCGTGAAATTTGAGATACCGTATTTTACTGTTTCTGGAATACAGGTATGTTACCAAAACATGATTTTCTTATATTCTAAATGTTGGAGGCTATTTTTTTCTGCATTGGGCATGATATTTCCTTCATTCAATGCCTCTGTCTGA
Protein sequence

>MsG0580025730.01.T01

MSGAASALFLLDIKGRILVWRDYRGDVSAIEAERFFTKLIDKQADEQSQDPVVYDNGVTYMFIQHSNVYLVIAARQNCNAASLLFFLHRLVDVFKHYFEELEEESLRDNFVVVYELLDEIMDFGYPQYTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGISYKKNEVFLDVVESVNILVNSNGQLIRSDVVGALKMRTFLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEANVEKHSKSRIEIMVKARSQFKERSTATNVEIELPVPVDATNPNVRTSMGSASYAPEKDALIWKIRSFPGGKEYMLRAEFRLPSITDEEAAPERKAPIRVKFEIPYFTVSGIQVCYQNMIFLYSKCWRLFFSALGMIFPSFNASV*