AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023697.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023697.01.T01 MTR_8g099550 87.705 610 11 2 29 574 1 610 0.0 1066
MsG0480023697.01.T01 MTR_5g009150 79.378 611 61 3 29 574 1 611 0.0 981
MsG0480023697.01.T01 MTR_8g027675 74.013 608 93 4 29 572 1 607 0.0 914
MsG0480023697.01.T01 MTR_4g098920 60.231 606 180 5 29 573 1 606 0.0 758
MsG0480023697.01.T01 MTR_7g451010 61.238 614 170 5 27 572 2 615 0.0 754
MsG0480023697.01.T01 MTR_8g009510 59.148 634 171 5 27 572 2 635 0.0 752
MsG0480023697.01.T01 MTR_8g105580 60.130 617 172 7 27 572 2 615 0.0 751
MsG0480023697.01.T01 MTR_1g032550 60.163 615 174 5 27 572 2 614 0.0 749
MsG0480023697.01.T01 MTR_8g105580 64.074 540 151 5 27 529 2 535 0.0 721
MsG0480023697.01.T01 MTR_8g009510 57.306 527 140 4 131 572 2 528 0.0 598
MsG0480023697.01.T01 MTR_2g009690 37.374 495 262 7 32 490 24 506 5.21e-95 308
MsG0480023697.01.T01 MTR_4g093750 36.235 494 267 6 31 488 14 495 3.08e-89 290
MsG0480023697.01.T01 MTR_4g093750 35.903 493 270 5 32 488 15 497 1.33e-88 290
MsG0480023697.01.T01 MTR_4g030140 29.126 515 301 11 29 496 4 501 4.09e-55 201
MsG0480023697.01.T01 MTR_4g134680 28.782 476 274 11 68 496 41 498 6.67e-55 198
MsG0480023697.01.T01 MTR_4g134680 28.782 476 274 11 68 496 41 498 1.28e-54 199
MsG0480023697.01.T01 MTR_4g134680 28.662 471 281 10 68 496 41 498 4.20e-54 197
MsG0480023697.01.T01 MTR_4g134680 33.333 201 134 0 296 496 1 201 9.90e-33 133
MsG0480023697.01.T01 MTR_8g087770 42.632 190 99 3 62 247 68 251 4.84e-32 131
MsG0480023697.01.T01 MTR_8g087750 42.246 187 104 3 62 247 71 254 1.83e-30 127
MsG0480023697.01.T01 MTR_8g463270 30.769 221 138 3 27 242 21 231 9.72e-19 90.9
MsG0480023697.01.T01 MTR_4g094300 27.723 202 135 5 49 242 28 226 1.26e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023697.01.T01 AT5G42080 76.557 610 79 2 29 574 1 610 0.0 957
MsG0480023697.01.T01 AT5G42080 76.557 610 79 2 29 574 1 610 0.0 957
MsG0480023697.01.T01 AT5G42080 75.902 610 77 3 29 574 1 604 0.0 941
MsG0480023697.01.T01 AT3G61760 73.486 611 96 5 29 574 1 610 0.0 913
MsG0480023697.01.T01 AT3G61760 79.206 529 81 3 29 529 1 528 0.0 871
MsG0480023697.01.T01 AT3G60190 61.192 621 166 5 27 572 2 622 0.0 786
MsG0480023697.01.T01 AT1G14830 61.075 614 169 6 27 572 2 613 0.0 761
MsG0480023697.01.T01 AT5G42080 82.984 429 46 1 29 430 1 429 0.0 741
MsG0480023697.01.T01 AT2G44590 58.756 611 184 6 29 572 1 610 0.0 737
MsG0480023697.01.T01 AT3G61760 79.775 445 61 3 29 445 1 444 0.0 736
MsG0480023697.01.T01 AT2G44590 55.719 612 185 6 29 572 1 594 0.0 694
MsG0480023697.01.T01 AT2G44590 55.974 611 184 7 29 572 1 593 0.0 693
MsG0480023697.01.T01 AT2G14120 34.068 499 277 8 31 488 20 507 1.16e-81 271
MsG0480023697.01.T01 AT2G14120 34.068 499 277 8 31 488 20 507 3.46e-81 271
MsG0480023697.01.T01 AT2G14120 34.068 499 277 8 31 488 20 507 3.65e-81 271
MsG0480023697.01.T01 AT4G33650 34.608 497 276 7 31 488 36 522 1.62e-80 270
MsG0480023697.01.T01 AT4G33650 34.608 497 276 7 31 488 36 522 1.65e-80 270
MsG0480023697.01.T01 AT2G14120 32.576 528 275 10 31 488 20 536 6.57e-77 259
MsG0480023697.01.T01 AT1G59610 29.651 516 294 13 29 496 4 498 8.31e-58 208
MsG0480023697.01.T01 AT1G10290 29.344 518 293 12 29 496 4 498 7.74e-57 206
MsG0480023697.01.T01 AT1G60530 46.524 187 96 3 62 247 62 245 1.69e-39 146
MsG0480023697.01.T01 AT1G60500 29.025 472 262 15 62 484 65 512 3.08e-36 144
MsG0480023697.01.T01 AT1G53140 31.651 218 120 5 37 242 47 247 1.81e-18 90.1

Find 146 sgRNAs with CRISPR-Local

Find 505 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGTTCATTCGCTATTAA+AGG 0.155423 4:+88708885 MsG0480023697.01.T01:intron
AGGAAAAGATTCACCGATTT+TGG 0.158213 4:+88704760 MsG0480023697.01.T01:CDS
GAATGAGGATCCTGCAATTA+TGG 0.256115 4:+88710585 MsG0480023697.01.T01:CDS
CTATTAGATCCGATCTAATA+TGG 0.265207 4:+88704388 MsG0480023697.01.T01:intron
AAGCCTGTTGCAGCTGATGC+TGG 0.280429 4:+88708058 MsG0480023697.01.T01:CDS
TGAAACCGAACTGGCTCGTT+TGG 0.280984 4:+88708033 MsG0480023697.01.T01:CDS
CTGGTTTACGGGCTGAGGTT+GGG 0.283613 4:+88709777 MsG0480023697.01.T01:CDS
GTCGTTGGTGGCCAGAGTTC+TGG 0.296472 4:+88704521 MsG0480023697.01.T01:CDS
GCAGCCGAACTGTATAATTC+TGG 0.297099 4:+88706437 MsG0480023697.01.T01:intron
CTAAGGCGGTGCAAGCTCTT+TGG 0.312942 4:-88704439 None:intergenic
TTTGACGAAGATTGATCTAA+TGG 0.319005 4:+88706803 MsG0480023697.01.T01:CDS
ATCTGACGGTTGATTTCTTT+CGG 0.331884 4:+88709882 MsG0480023697.01.T01:CDS
TGAAGCAATACCCTGGTTTA+CGG 0.336223 4:+88709765 MsG0480023697.01.T01:CDS
TAGTGCACTCCCTACTCTTT+GGG 0.348707 4:+88704478 MsG0480023697.01.T01:CDS
CTAGTGCACTCCCTACTCTT+TGG 0.351916 4:+88704477 MsG0480023697.01.T01:CDS
GATATAATGATTCTTATCTA+AGG 0.354606 4:+88709960 MsG0480023697.01.T01:CDS
AGGGACAGTTGAAATTTGTT+TGG 0.356007 4:-88705101 None:intergenic
GAATATATGCTAAGATGAAT+AGG 0.359659 4:-88705121 None:intergenic
TGTGCATGACATTGAGAATA+TGG 0.365705 4:+88705558 MsG0480023697.01.T01:CDS
AGCTTTCAATGGAAAATATA+AGG 0.374495 4:+88708577 MsG0480023697.01.T01:CDS
AGACTGAATGCCTGGAATCT+TGG 0.385851 4:-88707984 None:intergenic
TTGACACTCATCGATCTTCC+TGG 0.386900 4:+88705383 MsG0480023697.01.T01:CDS
TGGTTTACGGGCTGAGGTTG+GGG 0.387468 4:+88709778 MsG0480023697.01.T01:CDS
GAAGCAATACCCTGGTTTAC+GGG 0.387693 4:+88709766 MsG0480023697.01.T01:CDS
GCATCAACAGCTGCCTCGGC+AGG 0.388371 4:-88708699 None:intergenic
CCTGGTTTACGGGCTGAGGT+TGG 0.394247 4:+88709776 MsG0480023697.01.T01:CDS
AACTGCATCTATTTCAGCTT+GGG 0.397169 4:-88710653 None:intergenic
AAAAGAAAAGTTACCAAAAT+CGG 0.399826 4:-88704773 None:intergenic
AATCCACTCTAGTTACAATC+AGG 0.400990 4:+88708673 MsG0480023697.01.T01:CDS
GTTTGACAAGCAGCTTTCAA+TGG 0.401921 4:+88708566 MsG0480023697.01.T01:CDS
CAAAGAGCTTGCACCGCCTT+AGG 0.402102 4:+88704440 MsG0480023697.01.T01:CDS
AACACTACAACTGGTCGATA+TGG 0.405406 4:+88709850 MsG0480023697.01.T01:CDS
GAAACCGAACTGGCTCGTTT+GGG 0.407691 4:+88708034 MsG0480023697.01.T01:CDS
CTAATTAGAGACTGAATGCC+TGG 0.416975 4:-88707992 None:intergenic
GATTTCTTACCTCGTGGATC+AGG 0.421686 4:+88704578 MsG0480023697.01.T01:CDS
CTTTCCCAAACGAGCCAGTT+CGG 0.441013 4:-88708038 None:intergenic
ACCCCAGCATCAGCTGCAAC+AGG 0.443010 4:-88708061 None:intergenic
ATATTCAAAGACCATCTTGA+TGG 0.447318 4:+88708374 MsG0480023697.01.T01:CDS
CAAAAGGGCAACACTACAAC+TGG 0.449599 4:+88709841 MsG0480023697.01.T01:CDS
CAAAGCTGTTAGTGAGACTC+TGG 0.449716 4:+88708918 MsG0480023697.01.T01:CDS
GAATGAGAGATGAAAGCAAA+AGG 0.450845 4:+88709825 MsG0480023697.01.T01:CDS
CACTAACAGCTTTGTGAACC+AGG 0.457295 4:-88708909 None:intergenic
CCTGCTATCGCCGTCGTTGG+TGG 0.458671 4:+88704509 MsG0480023697.01.T01:CDS
TTCTGGAAAATCCTCCGTAT+TGG 0.463410 4:+88704538 MsG0480023697.01.T01:CDS
AGCCTGTTGCAGCTGATGCT+GGG 0.466361 4:+88708059 MsG0480023697.01.T01:CDS
CCAACCTCAGCCCGTAAACC+AGG 0.468070 4:-88709776 None:intergenic
TCCGTATTGGAGAGTGTTGT+CGG 0.471538 4:+88704551 MsG0480023697.01.T01:CDS
AATATATGCTAAGATGAATA+GGG 0.472521 4:-88705120 None:intergenic
AGCTCCCTGCTGCTCTGAAA+AGG 0.472526 4:+88708538 MsG0480023697.01.T01:CDS
CATATAGGTTAAAGTTCCCT+TGG 0.473662 4:+88707672 MsG0480023697.01.T01:CDS
AAATGAAATTGAAACCGAAC+TGG 0.477658 4:+88708024 MsG0480023697.01.T01:CDS
GAAGGAAATTCAAGATGAAA+CGG 0.484800 4:+88705060 MsG0480023697.01.T01:CDS
CTGAAATAGATGCAGTTGCT+TGG 0.485487 4:+88710659 MsG0480023697.01.T01:CDS
TATAATTCTGGCTATTTCGC+CGG 0.485900 4:+88706449 MsG0480023697.01.T01:CDS
TGAAATTTGTTTGGATCGAC+CGG 0.492583 4:-88705092 None:intergenic
TTGCTTGCTCAGATGTTGGA+AGG 0.493499 4:+88707644 MsG0480023697.01.T01:intron
AGACGACGGTATCCTTGCTC+TGG 0.498380 4:-88708645 None:intergenic
CTACGACGTTCCATAATTGC+AGG 0.498628 4:-88710595 None:intergenic
CAACTGGTCGATATGGAGTC+TGG 0.501050 4:+88709857 MsG0480023697.01.T01:CDS
GTAATCAAGTCCAAGATTCC+AGG 0.501222 4:+88707974 MsG0480023697.01.T01:intron
CAACTGCATCTATTTCAGCT+TGG 0.501627 4:-88710654 None:intergenic
TATTTGTAGGGATCGTTACT+CGG 0.504045 4:+88704665 MsG0480023697.01.T01:intron
ATACCCTGGTTTACGGGCTG+AGG 0.506554 4:+88709772 MsG0480023697.01.T01:CDS
GTATTTCATATCAATATCAA+TGG 0.508649 4:+88702903 MsG0480023697.01.T01:CDS
CCACCAACGACGGCGATAGC+AGG 0.509781 4:-88704509 None:intergenic
TACCGGTAGGATCCACTTCA+CGG 0.512959 4:-88706512 None:intergenic
TGTTGGAAGGGAGAGCATAT+AGG 0.515104 4:+88707657 MsG0480023697.01.T01:CDS
CTGAGTTTCTTCACCTTCCG+AGG 0.516849 4:+88704740 MsG0480023697.01.T01:CDS
GATTCTTATCTAAGGCGAAT+CGG 0.517945 4:+88709968 MsG0480023697.01.T01:CDS
GATGAAACGGATAGAGAAAC+CGG 0.518246 4:+88705073 MsG0480023697.01.T01:CDS
TGCTTGCTCAGATGTTGGAA+GGG 0.521748 4:+88707645 MsG0480023697.01.T01:intron
CCACCCTTGTCCACATCTTG+AGG 0.522131 4:-88709911 None:intergenic
AATTAAAATTTCCCGTGAAG+TGG 0.523008 4:+88706500 MsG0480023697.01.T01:CDS
TACCGCATCAACAGCTGCCT+CGG 0.523525 4:-88708703 None:intergenic
GGGCAAGTTATATGCAATCA+TGG 0.524553 4:+88708328 MsG0480023697.01.T01:intron
CAGTAATGACGACAAACGCT+TGG 0.524721 4:-88710563 None:intergenic
TAGTGGCCTTGCAAAGAGAC+TGG 0.526892 4:+88710615 MsG0480023697.01.T01:CDS
TCAATTTCCTACAGGCGACC+TGG 0.527613 4:+88708483 MsG0480023697.01.T01:intron
ATGTCATGCACAATACTCTC+AGG 0.527874 4:-88705547 None:intergenic
GGAAGAGAATCCCAAAGAGT+AGG 0.528008 4:-88704488 None:intergenic
AGATTCACCGTGGTCACCTA+AGG 0.530232 4:-88704456 None:intergenic
GTTGCAATATCTTGATTAGC+CGG 0.531053 4:-88706468 None:intergenic
CTATCGAAAATTGAATGAGT+GGG 0.536130 4:-88709938 None:intergenic
TTGTGTAGCTGCGGTGAGGA+AGG 0.537663 4:+88705042 MsG0480023697.01.T01:intron
TGACACTCATCGATCTTCCT+GGG 0.537665 4:+88705384 MsG0480023697.01.T01:CDS
TTTGTCGTCATTACTGAATG+AGG 0.539736 4:+88710570 MsG0480023697.01.T01:CDS
GCCGACAACACTCTCCAATA+CGG 0.542785 4:-88704552 None:intergenic
GAAGAGAATCCCAAAGAGTA+GGG 0.542886 4:-88704487 None:intergenic
CTATTTCAGCTTGGGCACTT+CGG 0.542999 4:-88710645 None:intergenic
CTTCCTGCTATCGCCGTCGT+TGG 0.543291 4:+88704506 MsG0480023697.01.T01:CDS
TGCCGAGGCAGCTGTTGATG+CGG 0.543898 4:+88708701 MsG0480023697.01.T01:CDS
CAGCTTCACAAGAGTGATGA+GGG 0.550682 4:+88704703 MsG0480023697.01.T01:CDS
ATAGCCAGAATTATACAGTT+CGG 0.552134 4:-88706441 None:intergenic
GAACATTACCTTCTCAATGT+AGG 0.558262 4:-88705587 None:intergenic
TCATTCGCTATTAAAGGACC+TGG 0.558428 4:+88708891 MsG0480023697.01.T01:CDS
AGGTTAAAGTTCCCTTGGAT+CGG 0.560301 4:+88707677 MsG0480023697.01.T01:CDS
AATGAGAGATGAAAGCAAAA+GGG 0.561742 4:+88709826 MsG0480023697.01.T01:CDS
AAACTTATTACAGAAGCTGA+TGG 0.561888 4:+88708600 MsG0480023697.01.T01:CDS
TCTATCGAAAATTGAATGAG+TGG 0.564548 4:-88709939 None:intergenic
TACAATCAGGGGCCCTGCCG+AGG 0.565034 4:+88708686 MsG0480023697.01.T01:CDS
GGTCTGCAAAGAGTATATAC+AGG 0.565881 4:-88710542 None:intergenic
CATCTTATTGCTCCAGAGCA+AGG 0.566493 4:+88708633 MsG0480023697.01.T01:CDS
CATCAACAGCTGCCTCGGCA+GGG 0.569211 4:-88708698 None:intergenic
TCGGAAGCTTCCTCAAGATG+TGG 0.572910 4:+88709901 MsG0480023697.01.T01:CDS
CTGTTCACAACACCGATCCA+AGG 0.576821 4:-88707689 None:intergenic
CGATCTTCCTGGGCTTACGA+AGG 0.578446 4:+88705394 MsG0480023697.01.T01:CDS
CTGGAGCAATAAGATGAGGT+TGG 0.582750 4:-88708626 None:intergenic
GGCAAAGATTTCTTACCTCG+TGG 0.586975 4:+88704572 MsG0480023697.01.T01:CDS
CTTAGCATATATTCTCCCAA+TGG 0.587409 4:+88705130 MsG0480023697.01.T01:CDS
TCCCGTGAAGTGGATCCTAC+CGG 0.593357 4:+88706510 MsG0480023697.01.T01:CDS
ATACATGCTTGTCTTAACAA+TGG 0.595315 4:-88702874 None:intergenic
TTGTGAAGCTGCAAAACAAG+TGG 0.596364 4:-88704691 None:intergenic
AATCTTCGTCAAAACTCCAA+TGG 0.598241 4:-88706793 None:intergenic
GCCCCTGATTGTAACTAGAG+TGG 0.598316 4:-88708676 None:intergenic
GCAGCTTCACAAGAGTGATG+AGG 0.600736 4:+88704702 MsG0480023697.01.T01:CDS
ACAGCGACCTTCGTAAGCCC+AGG 0.603913 4:-88705401 None:intergenic
ATCCACTCTAGTTACAATCA+GGG 0.605709 4:+88708674 MsG0480023697.01.T01:CDS
ACCGGTAGGATCCACTTCAC+GGG 0.605810 4:-88706511 None:intergenic
GCTTCCTCAAGATGTGGACA+AGG 0.607803 4:+88709907 MsG0480023697.01.T01:CDS
ACACATACACGCCATCAAGA+TGG 0.610251 4:-88708385 None:intergenic
AGAACTCTGGCCACCAACGA+CGG 0.610611 4:-88704519 None:intergenic
GCCTGTTGCAGCTGATGCTG+GGG 0.614544 4:+88708060 MsG0480023697.01.T01:CDS
TATGGAGTCTGGCTATCTGA+CGG 0.622814 4:+88709868 MsG0480023697.01.T01:CDS
ACAACTCCAGTCTCTTTGCA+AGG 0.623060 4:-88710621 None:intergenic
TGCTCTGGAGCAATAAGATG+AGG 0.624218 4:-88708630 None:intergenic
CAGGATTTGAAGCAATACCC+TGG 0.628775 4:+88709758 MsG0480023697.01.T01:intron
GGGCTTACGAAGGTCGCTGT+AGG 0.630278 4:+88705404 MsG0480023697.01.T01:CDS
TGTTCACAACACCGATCCAA+GGG 0.632790 4:-88707688 None:intergenic
GGTTCGCTCCTACATTGAGA+AGG 0.633877 4:+88705579 MsG0480023697.01.T01:CDS
TCCACTCTAGTTACAATCAG+GGG 0.638669 4:+88708675 MsG0480023697.01.T01:CDS
TGGACTTACATCAACAGCAT+CGG 0.640860 4:-88706835 None:intergenic
GCAATTATGGAACGTCGTAG+TGG 0.642760 4:+88710598 MsG0480023697.01.T01:CDS
CCTCAAGATGTGGACAAGGG+TGG 0.645800 4:+88709911 MsG0480023697.01.T01:CDS
GAAGATTGATCTAATGGACA+AGG 0.654022 4:+88706809 MsG0480023697.01.T01:CDS
TTCACCGTGGTCACCTAAGG+CGG 0.656734 4:-88704453 None:intergenic
TATCGAAAATTGAATGAGTG+GGG 0.658642 4:-88709937 None:intergenic
CAACCTCAGCCCGTAAACCA+GGG 0.671483 4:-88709775 None:intergenic
TGCACCGCCTTAGGTGACCA+CGG 0.675185 4:+88704449 MsG0480023697.01.T01:CDS
TAATTTGTGTAGCTGCGGTG+AGG 0.676029 4:+88705038 MsG0480023697.01.T01:intron
ATTTCCTACAGGCGACCTGG+AGG 0.691883 4:+88708486 MsG0480023697.01.T01:intron
GACAACACTCTCCAATACGG+AGG 0.703245 4:-88704549 None:intergenic
CTTCCTCAAGATGTGGACAA+GGG 0.710629 4:+88709908 MsG0480023697.01.T01:CDS
GAGTGGATTCAATGAGACGA+CGG 0.714501 4:-88708659 None:intergenic
AAGATTGATCTAATGGACAA+GGG 0.722186 4:+88706810 MsG0480023697.01.T01:CDS
ATGTTGACATGATTGCTGCA+AGG 0.728270 4:+88707735 MsG0480023697.01.T01:CDS
GGAGTGCACTAGATTCACCG+TGG 0.804143 4:-88704466 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATAAAAAAAATAAT+TGG - Chr4:88706858-88706877 None:intergenic 0.0%
!! AAAAAAATCTATATTTGTTT+CGG - Chr4:88705850-88705869 None:intergenic 10.0%
!! ACATATTATATATAAGAATA+AGG - Chr4:88705246-88705265 None:intergenic 10.0%
!! ATAAATAACTAAGAAAAATA+TGG + Chr4:88705682-88705701 MsG0480023697.01.T01:intron 10.0%
!! CATATTATATATAAGAATAA+GGG - Chr4:88705245-88705264 None:intergenic 10.0%
!! TTATATAGATATACATAATT+GGG - Chr4:88707068-88707087 None:intergenic 10.0%
!!! ATTTTTTTTTTATACAATTG+GGG + Chr4:88704602-88704621 MsG0480023697.01.T01:intron 10.0%
!!! GTATTTTTTTTTTATACAAT+TGG + Chr4:88704600-88704619 MsG0480023697.01.T01:intron 10.0%
!!! TATTTTTTCATACAATTAAA+TGG + Chr4:88703049-88703068 MsG0480023697.01.T01:intron 10.0%
!! AAAAAAAAATCAACAATCAA+CGG + Chr4:88703608-88703627 MsG0480023697.01.T01:intron 15.0%
!! AAAATAAATGGATATTATGT+GGG - Chr4:88708197-88708216 None:intergenic 15.0%
!! ATAACATTTGTGTAAAAATT+AGG + Chr4:88706373-88706392 MsG0480023697.01.T01:intron 15.0%
!! GATAATAAAATTATTACACA+TGG + Chr4:88703901-88703920 MsG0480023697.01.T01:intron 15.0%
!! GTTATATAGATATACATAAT+TGG - Chr4:88707069-88707088 None:intergenic 15.0%
!! TAAATAAATTGTATAATTGC+TGG + Chr4:88709001-88709020 MsG0480023697.01.T01:intron 15.0%
!! TAGTAAAATTGAATTAAAAC+TGG + Chr4:88703996-88704015 MsG0480023697.01.T01:intron 15.0%
!! TGTATGAAAAAATAAAACTT+AGG - Chr4:88703043-88703062 None:intergenic 15.0%
!! TTTCATATTTATAAGAACTA+AGG + Chr4:88707438-88707457 MsG0480023697.01.T01:intron 15.0%
!!! AAACTTCTTTTTGAATTTTT+TGG - Chr4:88704131-88704150 None:intergenic 15.0%
!!! AATAAATGAAAAGTATAATC+AGG - Chr4:88710441-88710460 None:intergenic 15.0%
!!! ACTTCACTTTTTAAATATAT+TGG - Chr4:88710156-88710175 None:intergenic 15.0%
!!! ATAATACATACAATTTTACA+TGG + Chr4:88707123-88707142 MsG0480023697.01.T01:intron 15.0%
!!! ATAGGAAATAAAATATTTTC+AGG + Chr4:88705631-88705650 MsG0480023697.01.T01:intron 15.0%
!!! ATTGATTTTTTAACTAATGT+AGG + Chr4:88703431-88703450 MsG0480023697.01.T01:intron 15.0%
!!! TATATAGAAACATTTTGAAA+TGG - Chr4:88704867-88704886 None:intergenic 15.0%
!!! TTAGTTTGAAAAACTTATTT+TGG - Chr4:88703686-88703705 None:intergenic 15.0%
!!! TTCTTTAAAAAAATAGCTAT+TGG - Chr4:88703855-88703874 None:intergenic 15.0%
!!! TTTAAGTTCATCAAAATAAA+TGG - Chr4:88708209-88708228 None:intergenic 15.0%
!! AAAAGAAAAGTTACCAAAAT+CGG - Chr4:88704776-88704795 None:intergenic 20.0%
!! AAATTCAAAAAGAAGTTTCA+TGG + Chr4:88704133-88704152 MsG0480023697.01.T01:intron 20.0%
!! AATAAAATACTTGATCTCTT+TGG + Chr4:88708826-88708845 MsG0480023697.01.T01:intron 20.0%
!! AATATATGCTAAGATGAATA+GGG - Chr4:88705123-88705142 None:intergenic 20.0%
!! ACATAAGTTCTCAAAAAAAT+TGG - Chr4:88708773-88708792 None:intergenic 20.0%
!! ACATTAAGTAAATAGTTTGA+TGG + Chr4:88706725-88706744 MsG0480023697.01.T01:intron 20.0%
!! ATCATTAATTTCAAAAACTG+TGG + Chr4:88706338-88706357 MsG0480023697.01.T01:intron 20.0%
!! ATGAAAAAATAAAACTTAGG+AGG - Chr4:88703040-88703059 None:intergenic 20.0%
!! ATGAACAACTATTACAAAAA+GGG - Chr4:88709663-88709682 None:intergenic 20.0%
!! ATTCAAATCAGTAAAATCAA+TGG - Chr4:88704826-88704845 None:intergenic 20.0%
!! CAAAATAAATGGATATTATG+TGG - Chr4:88708198-88708217 None:intergenic 20.0%
!! CATAAGTTCTCAAAAAAATT+GGG - Chr4:88708772-88708791 None:intergenic 20.0%
!! CATACAATTAAATGGAAAAT+AGG + Chr4:88703057-88703076 MsG0480023697.01.T01:intron 20.0%
!! CATGATTAAATTAATACAGT+TGG + Chr4:88709680-88709699 MsG0480023697.01.T01:intron 20.0%
!! GAAATCTTGAAATTTGATTA+TGG - Chr4:88703329-88703348 None:intergenic 20.0%
!! GATATAATGATTCTTATCTA+AGG + Chr4:88709960-88709979 MsG0480023697.01.T01:CDS 20.0%
!! GTATTTCATATCAATATCAA+TGG + Chr4:88702903-88702922 MsG0480023697.01.T01:CDS 20.0%
!! TAATCTATGCAATTATCATT+CGG - Chr4:88705889-88705908 None:intergenic 20.0%
!! TATATAATATGTAGATCTGT+CGG + Chr4:88705254-88705273 MsG0480023697.01.T01:intron 20.0%
!! TTATTTAAATATAGGGACTT+GGG - Chr4:88705950-88705969 None:intergenic 20.0%
!! TTCAAATCAGTAAAATCAAT+GGG - Chr4:88704825-88704844 None:intergenic 20.0%
!! TTGAAAGCAGAAAATTTATA+GGG - Chr4:88709242-88709261 None:intergenic 20.0%
!! TTTATTTAAATATAGGGACT+TGG - Chr4:88705951-88705970 None:intergenic 20.0%
!!! AATTGTTAATACCTTTCTTT+TGG - Chr4:88704059-88704078 None:intergenic 20.0%
!!! AATTTTGTCATATGTCAATA+TGG + Chr4:88710277-88710296 MsG0480023697.01.T01:intron 20.0%
!!! AATTTTTTTGAGAACTTATG+TGG + Chr4:88708772-88708791 MsG0480023697.01.T01:intron 20.0%
!!! CAAAAATCAAAGGAAAATTT+TGG + Chr4:88709424-88709443 MsG0480023697.01.T01:intron 20.0%
!!! CAAAATTTTCCTTTGATTTT+TGG - Chr4:88709426-88709445 None:intergenic 20.0%
!!! CTATAATTTTGTCTATTTGT+GGG - Chr4:88705736-88705755 None:intergenic 20.0%
!!! GATAAAAGTTATGTTTCTAT+AGG - Chr4:88705797-88705816 None:intergenic 20.0%
!!! GGGGTTTTTATTTAAATATA+GGG - Chr4:88705957-88705976 None:intergenic 20.0%
!!! GTTTATTTGTTTCAACTTTT+AGG + Chr4:88706762-88706781 MsG0480023697.01.T01:intron 20.0%
!!! TCTATAATTTTGTCTATTTG+TGG - Chr4:88705737-88705756 None:intergenic 20.0%
!!! TGGGGTTTTTATTTAAATAT+AGG - Chr4:88705958-88705977 None:intergenic 20.0%
!!! TTATCTTTTTGTAATGCTAT+GGG + Chr4:88709560-88709579 MsG0480023697.01.T01:intron 20.0%
!!! TTATTCAAGTGTTGAATTAT+GGG + Chr4:88705330-88705349 MsG0480023697.01.T01:intron 20.0%
!!! TTGATTTTTATATCAGCATT+TGG + Chr4:88707946-88707965 MsG0480023697.01.T01:intron 20.0%
!!! TTTATTCAAGTGTTGAATTA+TGG + Chr4:88705329-88705348 MsG0480023697.01.T01:intron 20.0%
!!! TTTCAATATTTCCTTTTCTT+TGG + Chr4:88706536-88706555 MsG0480023697.01.T01:intron 20.0%
! AAAACAACTGATCATTATCA+GGG - Chr4:88707566-88707585 None:intergenic 25.0%
! AATATAATAGCATGCAAACA+TGG + Chr4:88706875-88706894 MsG0480023697.01.T01:intron 25.0%
! AATTGAAACCAGAAATTTAG+AGG + Chr4:88709399-88709418 MsG0480023697.01.T01:intron 25.0%
! ACATGGAAACATTTCAAAAT+CGG - Chr4:88704992-88705011 None:intergenic 25.0%
! AGACCTTAAAAAAAGTCATT+TGG - Chr4:88709307-88709326 None:intergenic 25.0%
! AGCTTTCAATGGAAAATATA+AGG + Chr4:88708577-88708596 MsG0480023697.01.T01:CDS 25.0%
! AGTGCAAAAAGTTAGAATAA+TGG - Chr4:88706669-88706688 None:intergenic 25.0%
! ATAATTGATGCGTATTTGTA+GGG + Chr4:88704653-88704672 MsG0480023697.01.T01:intron 25.0%
! ATACAAATCACGCTAAAAAA+AGG - Chr4:88702937-88702956 None:intergenic 25.0%
! ATATATTCAAACGTACCATT+GGG - Chr4:88705148-88705167 None:intergenic 25.0%
! ATCAATATGACTTTAGTTGT+TGG - Chr4:88707931-88707950 None:intergenic 25.0%
! ATTTATAAGAACTAAGGAGT+TGG + Chr4:88707444-88707463 MsG0480023697.01.T01:intron 25.0%
! CAACATGAAAACACTTAATA+AGG - Chr4:88708280-88708299 None:intergenic 25.0%
! CAACTTAGTGTTAGAATATT+GGG + Chr4:88707034-88707053 MsG0480023697.01.T01:intron 25.0%
! CATGAACAACTATTACAAAA+AGG - Chr4:88709664-88709683 None:intergenic 25.0%
! GAATATATGCTAAGATGAAT+AGG - Chr4:88705124-88705143 None:intergenic 25.0%
! GATATACATAATTGGGATTA+TGG - Chr4:88707061-88707080 None:intergenic 25.0%
! GATGAACTTAAATATTGATG+TGG + Chr4:88708217-88708236 MsG0480023697.01.T01:intron 25.0%
! GATTTAATCATAAAGATGAG+AGG + Chr4:88705820-88705839 MsG0480023697.01.T01:intron 25.0%
! GGTATATATGTCAATATTGA+TGG - Chr4:88703391-88703410 None:intergenic 25.0%
! GTTGAAAGCAGAAAATTTAT+AGG - Chr4:88709243-88709262 None:intergenic 25.0%
! TAAAACAACTGATCATTATC+AGG - Chr4:88707567-88707586 None:intergenic 25.0%
! TAGAATAATGGTTAAATCTG+CGG - Chr4:88706657-88706676 None:intergenic 25.0%
! TAGAGAATAAATAAGAATGC+AGG - Chr4:88707382-88707401 None:intergenic 25.0%
! TATATATTCAAACGTACCAT+TGG - Chr4:88705149-88705168 None:intergenic 25.0%
! TATCATCTGTCATTGTTAAA+TGG + Chr4:88710207-88710226 MsG0480023697.01.T01:intron 25.0%
! TCAAATCAGTAAAATCAATG+GGG - Chr4:88704824-88704843 None:intergenic 25.0%
! TCGTTAAATGCATTCAAAAT+GGG - Chr4:88706574-88706593 None:intergenic 25.0%
! TCTATAGGATGATTATGTAA+AGG - Chr4:88705782-88705801 None:intergenic 25.0%
! TCTGTGTTGAAAAAACTAAA+TGG - Chr4:88703105-88703124 None:intergenic 25.0%
! TGAAATGAAGGTTAAAACAA+CGG - Chr4:88704224-88704243 None:intergenic 25.0%
! TGATGTTCATACATAATACA+AGG - Chr4:88706322-88706341 None:intergenic 25.0%
! TTATGGAACAAATCACATAA+TGG - Chr4:88703281-88703300 None:intergenic 25.0%
! TTATTATCCATGTGTTTCAT+TGG - Chr4:88703889-88703908 None:intergenic 25.0%
! TTCGTTAAATGCATTCAAAA+TGG - Chr4:88706575-88706594 None:intergenic 25.0%
! TTGGAACAGAGAATTTAAAA+TGG - Chr4:88708108-88708127 None:intergenic 25.0%
! TTTATAAGAACTAAGGAGTT+GGG + Chr4:88707445-88707464 MsG0480023697.01.T01:intron 25.0%
!! AAAAGTATAATCAGGAAACT+TGG - Chr4:88710433-88710452 None:intergenic 25.0%
!! AAAGGAAATATTGAAAGTAC+CGG - Chr4:88706532-88706551 None:intergenic 25.0%
!! AAATCAAAGGAAAATTTTGG+AGG + Chr4:88709427-88709446 MsG0480023697.01.T01:intron 25.0%
!! AATCAAAGGAAAATTTTGGA+GGG + Chr4:88709428-88709447 MsG0480023697.01.T01:intron 25.0%
!! ATTTTTGCATAACTGTAGAT+GGG + Chr4:88705521-88705540 MsG0480023697.01.T01:intron 25.0%
!! CAAGTACTAAAGCTTTTAAT+AGG + Chr4:88705613-88705632 MsG0480023697.01.T01:intron 25.0%
!! GCATTTAACGAATCTTTTTA+TGG + Chr4:88706583-88706602 MsG0480023697.01.T01:intron 25.0%
!! GTTATCTTTTTGTAATGCTA+TGG + Chr4:88709559-88709578 MsG0480023697.01.T01:intron 25.0%
!! TGAACTTTTGTAAAAAAAGC+AGG - Chr4:88709273-88709292 None:intergenic 25.0%
!! TTAGGTTTTCCATATTAGAT+CGG - Chr4:88704400-88704419 None:intergenic 25.0%
!! TTATAAATTTTATCACCTCC+AGG - Chr4:88708504-88708523 None:intergenic 25.0%
!!! AGCAATATGTTTTTGTAAGA+CGG - Chr4:88703010-88703029 None:intergenic 25.0%
!!! ATACCTTTCTTTTGGTTTTT+TGG - Chr4:88704051-88704070 None:intergenic 25.0%
!!! ATTTTCAGGATCAACTTATA+TGG + Chr4:88705645-88705664 MsG0480023697.01.T01:intron 25.0%
!!! CTGTTTTTTCATTGCATAAA+GGG - Chr4:88706016-88706035 None:intergenic 25.0%
!!! GTTCCAAATGACTTTTTTTA+AGG + Chr4:88709301-88709320 MsG0480023697.01.T01:intron 25.0%
!!! TAGTTTTTTCAACACAGATA+TGG + Chr4:88703107-88703126 MsG0480023697.01.T01:intron 25.0%
!!! TATTTTTGCATAACTGTAGA+TGG + Chr4:88705520-88705539 MsG0480023697.01.T01:intron 25.0%
!!! TCTGTTTTTTCATTGCATAA+AGG - Chr4:88706017-88706036 None:intergenic 25.0%
!!! TGAACTTGGACTTTTTTTAT+GGG - Chr4:88705987-88706006 None:intergenic 25.0%
!!! TGGTTTTGAAATTGAAATGA+AGG - Chr4:88704236-88704255 None:intergenic 25.0%
!!! TTTGATGGTTTTCTAATCAT+TGG + Chr4:88706740-88706759 MsG0480023697.01.T01:intron 25.0%
!!! TTTTGTTGACTAATGAGATT+AGG - Chr4:88704418-88704437 None:intergenic 25.0%
!!! TTTTTTTAGCGTGATTTGTA+TGG + Chr4:88702936-88702955 MsG0480023697.01.T01:intron 25.0%
AAACTTATTACAGAAGCTGA+TGG + Chr4:88708600-88708619 MsG0480023697.01.T01:CDS 30.0%
AAACTTGAACGGACAATATA+TGG + Chr4:88710014-88710033 MsG0480023697.01.T01:intron 30.0%
AAAGTAGTCTCAAACTTGAA+CGG + Chr4:88710003-88710022 MsG0480023697.01.T01:intron 30.0%
AAATGAAATTGAAACCGAAC+TGG + Chr4:88708024-88708043 MsG0480023697.01.T01:CDS 30.0%
AAATTAATACAGTTGGAACC+TGG + Chr4:88709687-88709706 MsG0480023697.01.T01:intron 30.0%
AAGGTCAAAACAATGGAAAA+GGG + Chr4:88706912-88706931 MsG0480023697.01.T01:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG + Chr4:88709470-88709489 MsG0480023697.01.T01:intron 30.0%
AATGAGAGATGAAAGCAAAA+GGG + Chr4:88709826-88709845 MsG0480023697.01.T01:CDS 30.0%
AATTAAAATTTCCCGTGAAG+TGG + Chr4:88706500-88706519 MsG0480023697.01.T01:CDS 30.0%
AATTCTCAAAGCAAATACAG+AGG - Chr4:88709166-88709185 None:intergenic 30.0%
ACTCGATAATGAACAGATTT+AGG - Chr4:88709497-88709516 None:intergenic 30.0%
AGCGTAAGAAAATCACATAT+AGG + Chr4:88704187-88704206 MsG0480023697.01.T01:intron 30.0%
AGTTTCATGGAATAGAAGAA+AGG + Chr4:88704146-88704165 MsG0480023697.01.T01:intron 30.0%
ATAAGCTGTTTATCCAAACA+GGG + Chr4:88709471-88709490 MsG0480023697.01.T01:intron 30.0%
ATACATGCTTGTCTTAACAA+TGG - Chr4:88702877-88702896 None:intergenic 30.0%
ATAGCAGCAAGAAATAAAAC+TGG - Chr4:88708973-88708992 None:intergenic 30.0%
ATAGCCAGAATTATACAGTT+CGG - Chr4:88706444-88706463 None:intergenic 30.0%
ATATGATTATTTCGTGAGTC+TGG - Chr4:88703413-88703432 None:intergenic 30.0%
ATATTCAAAGACCATCTTGA+TGG + Chr4:88708374-88708393 MsG0480023697.01.T01:CDS 30.0%
ATTAGATCGGATCTAATAGA+TGG - Chr4:88704387-88704406 None:intergenic 30.0%
ATTCTCAAAGCAAATACAGA+GGG - Chr4:88709165-88709184 None:intergenic 30.0%
ATTTGGAAACAGCATTTGAA+TGG + Chr4:88709062-88709081 MsG0480023697.01.T01:intron 30.0%
CAAATCAGTAAAATCAATGG+GGG - Chr4:88704823-88704842 None:intergenic 30.0%
CATAATTGATGCGTATTTGT+AGG + Chr4:88704652-88704671 MsG0480023697.01.T01:intron 30.0%
CATTGTTTATTGTCAAGTAC+GGG + Chr4:88710334-88710353 MsG0480023697.01.T01:intron 30.0%
CCATTGTTTATTGTCAAGTA+CGG + Chr4:88710333-88710352 MsG0480023697.01.T01:intron 30.0%
CGTTAAATGCATTCAAAATG+GGG - Chr4:88706573-88706592 None:intergenic 30.0%
CTATCGAAAATTGAATGAGT+GGG - Chr4:88709941-88709960 None:intergenic 30.0%
CTATTAGATCCGATCTAATA+TGG + Chr4:88704388-88704407 MsG0480023697.01.T01:intron 30.0%
GAAATGAAGGTTAAAACAAC+GGG - Chr4:88704223-88704242 None:intergenic 30.0%
GAAATGTTTCCATGTATGTA+TGG + Chr4:88704997-88705016 MsG0480023697.01.T01:intron 30.0%
GAAGGAAATTCAAGATGAAA+CGG + Chr4:88705060-88705079 MsG0480023697.01.T01:CDS 30.0%
GAGAAATTACTTCCAAACTT+GGG - Chr4:88705919-88705938 None:intergenic 30.0%
GCAAAGAATGAGTATTTACA+AGG - Chr4:88707091-88707110 None:intergenic 30.0%
GCAACTTAGTGTTAGAATAT+TGG + Chr4:88707033-88707052 MsG0480023697.01.T01:intron 30.0%
GTAGGAAATTGACACAAATA+AGG - Chr4:88708475-88708494 None:intergenic 30.0%
GTTACCATTCTTAATGTTGA+TGG + Chr4:88703161-88703180 MsG0480023697.01.T01:intron 30.0%
GTTTCATGGAATAGAAGAAA+GGG + Chr4:88704147-88704166 MsG0480023697.01.T01:intron 30.0%
TATCGAAAATTGAATGAGTG+GGG - Chr4:88709940-88709959 None:intergenic 30.0%
TATGATTATTTCGTGAGTCT+GGG - Chr4:88703412-88703431 None:intergenic 30.0%
TATTTGTGTCAATTTCCTAC+AGG + Chr4:88708475-88708494 MsG0480023697.01.T01:intron 30.0%
TCAACATTAAGAATGGTAAC+TGG - Chr4:88703161-88703180 None:intergenic 30.0%
TCATTTGTGTGTGTTTATAC+AGG + Chr4:88708164-88708183 MsG0480023697.01.T01:intron 30.0%
TCTATCGAAAATTGAATGAG+TGG - Chr4:88709942-88709961 None:intergenic 30.0%
TGAGAAATTACTTCCAAACT+TGG - Chr4:88705920-88705939 None:intergenic 30.0%
TGATGAGTAGAAATTTACAG+AGG + Chr4:88707260-88707279 MsG0480023697.01.T01:intron 30.0%
TGTAACTGAAATAGTGATGT+AGG + Chr4:88709537-88709556 MsG0480023697.01.T01:intron 30.0%
TGTAAGATCGTTTGAATTGT+AGG + Chr4:88705707-88705726 MsG0480023697.01.T01:intron 30.0%
TTAATAAGGATCCCTGAAAA+TGG - Chr4:88708266-88708285 None:intergenic 30.0%
TTCATTAGAGCTTGATTTAG+TGG + Chr4:88703202-88703221 MsG0480023697.01.T01:intron 30.0%
TTCTAGTGACAATGTTCATT+TGG + Chr4:88709045-88709064 MsG0480023697.01.T01:intron 30.0%
TTGTTACAAGGTCAAAACAA+TGG + Chr4:88706905-88706924 MsG0480023697.01.T01:intron 30.0%
TTTAGAGGACCAAAAATCAA+AGG + Chr4:88709414-88709433 MsG0480023697.01.T01:intron 30.0%
TTTGACGAAGATTGATCTAA+TGG + Chr4:88706803-88706822 MsG0480023697.01.T01:CDS 30.0%
! AAGATTGATCTAATGGACAA+GGG + Chr4:88706810-88706829 MsG0480023697.01.T01:CDS 30.0%
! AATATGACACTCCATTTTCA+GGG + Chr4:88708252-88708271 MsG0480023697.01.T01:intron 30.0%
! AATATTGATGTGGTGATGAT+TGG + Chr4:88708227-88708246 MsG0480023697.01.T01:intron 30.0%
! ACTAAATCAAGCTCTAATGA+AGG - Chr4:88703203-88703222 None:intergenic 30.0%
! CGTGAACTTTTGTAAAAAAC+AGG + Chr4:88709370-88709389 MsG0480023697.01.T01:intron 30.0%
! CTAAATCAAGCTCTAATGAA+GGG - Chr4:88703202-88703221 None:intergenic 30.0%
! GAAGTTTTGCTTATAGTGAA+CGG + Chr4:88710171-88710190 MsG0480023697.01.T01:intron 30.0%
! GCAAGATAAACTTTCTAGAA+TGG - Chr4:88706266-88706285 None:intergenic 30.0%
! GCAAGCAAAAGTATATATCA+TGG - Chr4:88707632-88707651 None:intergenic 30.0%
! GCATCATTTGCTGAAATATT+AGG + Chr4:88707871-88707890 MsG0480023697.01.T01:intron 30.0%
! GTTTTGCTTATAATAGTGAC+CGG - Chr4:88710065-88710084 None:intergenic 30.0%
! TAATATGACACTCCATTTTC+AGG + Chr4:88708251-88708270 MsG0480023697.01.T01:intron 30.0%
! TGACAATAAACAATGGACTT+CGG - Chr4:88710329-88710348 None:intergenic 30.0%
! TGAGATAAAGGGTTTTCTTT+CGG + Chr4:88709197-88709216 MsG0480023697.01.T01:intron 30.0%
!! CATGGTTATAGTTTGTTACA+AGG + Chr4:88706893-88706912 MsG0480023697.01.T01:intron 30.0%
!! GCAATATGTTTTTGTAAGAC+GGG - Chr4:88703009-88703028 None:intergenic 30.0%
!! TGTTTTGAATTGATTCTTCC+AGG + Chr4:88708867-88708886 MsG0480023697.01.T01:intron 30.0%
!! TTTTTGGTCCTCTAAATTTC+TGG - Chr4:88709410-88709429 None:intergenic 30.0%
!!! CTGAACTTGGACTTTTTTTA+TGG - Chr4:88705988-88706007 None:intergenic 30.0%
!!! CTTTTTGCACTGTTGATTTT+TGG + Chr4:88706678-88706697 MsG0480023697.01.T01:intron 30.0%
AAAAAAATACCTGATCCACG+AGG - Chr4:88704590-88704609 None:intergenic 35.0%
AAACAAAACCCAGGTTGTAA+AGG + Chr4:88706054-88706073 MsG0480023697.01.T01:intron 35.0%
AAACACCTAGCTAACAGAAT+GGG + Chr4:88707796-88707815 MsG0480023697.01.T01:intron 35.0%
AACACATTGAGGAGAGTTTA+TGG - Chr4:88703298-88703317 None:intergenic 35.0%
AACGCTAAAAGCCAAAGAAA+AGG - Chr4:88706550-88706569 None:intergenic 35.0%
AACTGCATCTATTTCAGCTT+GGG - Chr4:88710656-88710675 None:intergenic 35.0%
AATCCACTCTAGTTACAATC+AGG + Chr4:88708673-88708692 MsG0480023697.01.T01:CDS 35.0%
AATCTTCGTCAAAACTCCAA+TGG - Chr4:88706796-88706815 None:intergenic 35.0%
AATGCAGGTCAATTGAAATC+AGG - Chr4:88707367-88707386 None:intergenic 35.0%
AATGTAAAATGAGAAGTCCC+AGG - Chr4:88708950-88708969 None:intergenic 35.0%
ACACACAAATGACAAAAGTC+TGG - Chr4:88708156-88708175 None:intergenic 35.0%
AGGTCAAAACAATGGAAAAG+GGG + Chr4:88706913-88706932 MsG0480023697.01.T01:intron 35.0%
ATCCACTCTAGTTACAATCA+GGG + Chr4:88708674-88708693 MsG0480023697.01.T01:CDS 35.0%
ATCGGATCTAATAGATGGAA+CGG - Chr4:88704382-88704401 None:intergenic 35.0%
ATGAAAATCGTTGAAGAGAC+CGG - Chr4:88706179-88706198 None:intergenic 35.0%
ATTAAGAATGGTAACTGGTG+AGG - Chr4:88703156-88703175 None:intergenic 35.0%
ATTCTCTGTTCCAAAACCAT+TGG + Chr4:88708114-88708133 MsG0480023697.01.T01:intron 35.0%
ATTGCCAGTAAATGAAAACC+AGG - Chr4:88709708-88709727 None:intergenic 35.0%
CAAGGTCAAAACAATGGAAA+AGG + Chr4:88706911-88706930 MsG0480023697.01.T01:intron 35.0%
CAGATAAGCTCATTAGTCAT+AGG - Chr4:88707225-88707244 None:intergenic 35.0%
CAGTGAAAAAGTGATCAAGT+AGG - Chr4:88710373-88710392 None:intergenic 35.0%
CATATAGGTTAAAGTTCCCT+TGG + Chr4:88707672-88707691 MsG0480023697.01.T01:CDS 35.0%
CATGTATGTATGGATGGTAA+TGG + Chr4:88705007-88705026 MsG0480023697.01.T01:intron 35.0%
CATTACCATCCATACATACA+TGG - Chr4:88705009-88705028 None:intergenic 35.0%
CCAATAACCAATGAAACACA+TGG + Chr4:88703879-88703898 MsG0480023697.01.T01:intron 35.0%
CCGTACTTGACAATAAACAA+TGG - Chr4:88710336-88710355 None:intergenic 35.0%
CTATGACTAATGAGCTTATC+TGG + Chr4:88707223-88707242 MsG0480023697.01.T01:intron 35.0%
CTGCCAAAAAACCAAAAGAA+AGG + Chr4:88704045-88704064 MsG0480023697.01.T01:intron 35.0%
CTTAGCATATATTCTCCCAA+TGG + Chr4:88705130-88705149 MsG0480023697.01.T01:CDS 35.0%
GAACATTACCTTCTCAATGT+AGG - Chr4:88705590-88705609 None:intergenic 35.0%
GAATGAGAGATGAAAGCAAA+AGG + Chr4:88709825-88709844 MsG0480023697.01.T01:CDS 35.0%
GATTAAGAAGTTCCCAAGTT+TGG + Chr4:88705904-88705923 MsG0480023697.01.T01:intron 35.0%
GTTAGCTAGGTGTTTATTTC+AGG - Chr4:88707791-88707810 None:intergenic 35.0%
GTTGAGTTAGTGTTAAGGTT+GGG + Chr4:88707177-88707196 MsG0480023697.01.T01:intron 35.0%
GTTGCAATATCTTGATTAGC+CGG - Chr4:88706471-88706490 None:intergenic 35.0%
TAAACACCTAGCTAACAGAA+TGG + Chr4:88707795-88707814 MsG0480023697.01.T01:intron 35.0%
TAAGGTTGGGTATCATTCTA+TGG + Chr4:88707190-88707209 MsG0480023697.01.T01:intron 35.0%
TAGAATGGTTGTTAAGAGCA+CGG - Chr4:88706251-88706270 None:intergenic 35.0%
TATAATCAGGAAACTTGGAG+AGG - Chr4:88710428-88710447 None:intergenic 35.0%
TATTTGTAGGGATCGTTACT+CGG + Chr4:88704665-88704684 MsG0480023697.01.T01:intron 35.0%
TCATAGTTTAATACTCCCTC+CGG + Chr4:88710043-88710062 MsG0480023697.01.T01:intron 35.0%
TCTATGCAATTATCATTCGG+TGG - Chr4:88705886-88705905 None:intergenic 35.0%
TGAGTTGTTTGGGTCAAAAA+CGG + Chr4:88706079-88706098 MsG0480023697.01.T01:intron 35.0%
TGATTCGTCTTCGAATGATT+AGG + Chr4:88703227-88703246 MsG0480023697.01.T01:intron 35.0%
TGGAGAATATCAACACATTG+AGG - Chr4:88703309-88703328 None:intergenic 35.0%
TGTCATCAAAAAAAGTCGCT+TGG + Chr4:88709338-88709357 MsG0480023697.01.T01:intron 35.0%
TGTGCATGACATTGAGAATA+TGG + Chr4:88705558-88705577 MsG0480023697.01.T01:CDS 35.0%
TGTTTCCATGTATGTATGGA+TGG + Chr4:88705001-88705020 MsG0480023697.01.T01:intron 35.0%
TTTCACTGAGCTAGGAAAAA+TGG + Chr4:88710385-88710404 MsG0480023697.01.T01:intron 35.0%
TTTGAGAACTTATGTGGTAG+TGG + Chr4:88708778-88708797 MsG0480023697.01.T01:intron 35.0%
TTTGTCGTCATTACTGAATG+AGG + Chr4:88710570-88710589 MsG0480023697.01.T01:CDS 35.0%
! AAATCGGTGAATCTTTTCCT+CGG - Chr4:88704760-88704779 None:intergenic 35.0%
! AGGGACAGTTGAAATTTGTT+TGG - Chr4:88705104-88705123 None:intergenic 35.0%
! ATCTGACGGTTGATTTCTTT+CGG + Chr4:88709882-88709901 MsG0480023697.01.T01:CDS 35.0%
! CCATGTGTTTCATTGGTTAT+TGG - Chr4:88703882-88703901 None:intergenic 35.0%
! GAAGATTGATCTAATGGACA+AGG + Chr4:88706809-88706828 MsG0480023697.01.T01:CDS 35.0%
! GAGATAAAGGGTTTTCTTTC+GGG + Chr4:88709198-88709217 MsG0480023697.01.T01:intron 35.0%
! GATTCTTATCTAAGGCGAAT+CGG + Chr4:88709968-88709987 MsG0480023697.01.T01:CDS 35.0%
! GGCAATTTTCTCATCAATAC+TGG + Chr4:88709722-88709741 MsG0480023697.01.T01:intron 35.0%
! TATAATTCTGGCTATTTCGC+CGG + Chr4:88706449-88706468 MsG0480023697.01.T01:CDS 35.0%
! TCTTCAACGATTTTCATGGT+TGG + Chr4:88706182-88706201 MsG0480023697.01.T01:intron 35.0%
! TGAAATTTGTTTGGATCGAC+CGG - Chr4:88705095-88705114 None:intergenic 35.0%
! TGTAAAGGTGTGAGTTGTTT+GGG + Chr4:88706069-88706088 MsG0480023697.01.T01:intron 35.0%
! TTGTAAAGGTGTGAGTTGTT+TGG + Chr4:88706068-88706087 MsG0480023697.01.T01:intron 35.0%
! TTTTGCTTATAGTGAACGGA+GGG + Chr4:88710175-88710194 MsG0480023697.01.T01:intron 35.0%
! TTTTGTAATGCTATGGGCAT+TGG + Chr4:88709566-88709585 MsG0480023697.01.T01:intron 35.0%
!! AGCATACTGCTTTTCATACA+TGG - Chr4:88706400-88706419 None:intergenic 35.0%
!! CTAGAAGTGCTTGAGATAAA+GGG + Chr4:88709186-88709205 MsG0480023697.01.T01:intron 35.0%
!! GAAATATTGAAAGTACCGGT+AGG - Chr4:88706528-88706547 None:intergenic 35.0%
!! GCATACTGCTTTTCATACAT+GGG - Chr4:88706399-88706418 None:intergenic 35.0%
!! TACTGGCTTTGTTTATTCTC+AGG + Chr4:88709739-88709758 MsG0480023697.01.T01:intron 35.0%
!! TCTAGAAGTGCTTGAGATAA+AGG + Chr4:88709185-88709204 MsG0480023697.01.T01:intron 35.0%
!! TGGTTTAATTTGTGTAGCTG+CGG + Chr4:88705033-88705052 MsG0480023697.01.T01:intron 35.0%
!!! AGGAAAAGATTCACCGATTT+TGG + Chr4:88704760-88704779 MsG0480023697.01.T01:CDS 35.0%
!!! TGGACTTTTTTTATGGGACT+CGG - Chr4:88705981-88706000 None:intergenic 35.0%
AAAAGTCTGGAGGAAAGACA+AGG - Chr4:88708143-88708162 None:intergenic 40.0%
AACACCTAGCTAACAGAATG+GGG + Chr4:88707797-88707816 MsG0480023697.01.T01:intron 40.0%
AACACTACAACTGGTCGATA+TGG + Chr4:88709850-88709869 MsG0480023697.01.T01:CDS 40.0%
AACTCACACCTTTACAACCT+GGG - Chr4:88706065-88706084 None:intergenic 40.0%
ACAACTGCAAGAGTCACAAA+AGG - Chr4:88705359-88705378 None:intergenic 40.0%
ACATTGTCACTAGAATTCCC+CGG - Chr4:88709040-88709059 None:intergenic 40.0%
AGAGGAAAATCGTTGAATCG+TGG - Chr4:88706142-88706161 None:intergenic 40.0%
AGCAAATACAGAGGGATAGT+TGG - Chr4:88709157-88709176 None:intergenic 40.0%
AGCCTTCCATATTGAGGATA+TGG + Chr4:88707340-88707359 MsG0480023697.01.T01:intron 40.0%
AGGAAAATCGTTGAATCGTG+GGG - Chr4:88706140-88706159 None:intergenic 40.0%
AGGAAAGACAAGGTAACCAA+TGG - Chr4:88708133-88708152 None:intergenic 40.0%
AGGGTTATGCTATAAACTCG+AGG - Chr4:88707547-88707566 None:intergenic 40.0%
AGGTTAAAGTTCCCTTGGAT+CGG + Chr4:88707677-88707696 MsG0480023697.01.T01:CDS 40.0%
ATAAAGGGATGCACTGAACT+TGG - Chr4:88706001-88706020 None:intergenic 40.0%
ATGGAATAGAAGAAAGGGCA+CGG + Chr4:88704152-88704171 MsG0480023697.01.T01:intron 40.0%
ATGTCATGCACAATACTCTC+AGG - Chr4:88705550-88705569 None:intergenic 40.0%
ATGTTGACATGATTGCTGCA+AGG + Chr4:88707735-88707754 MsG0480023697.01.T01:CDS 40.0%
CAAAAACTGTGGCAAGTTCT+TGG + Chr4:88706349-88706368 MsG0480023697.01.T01:intron 40.0%
CAACTGCATCTATTTCAGCT+TGG - Chr4:88710657-88710676 None:intergenic 40.0%
CACAAATGACAAAAGTCTGG+AGG - Chr4:88708153-88708172 None:intergenic 40.0%
CCAGGTTCATTCGCTATTAA+AGG + Chr4:88708885-88708904 MsG0480023697.01.T01:intron 40.0%
CCTTAACACTAACTCAACCA+AGG - Chr4:88707175-88707194 None:intergenic 40.0%
CCTTGGTTGAGTTAGTGTTA+AGG + Chr4:88707172-88707191 MsG0480023697.01.T01:intron 40.0%
CCTTTAATAGCGAATGAACC+TGG - Chr4:88708888-88708907 None:intergenic 40.0%
CGAGTCAAAAAACAAAACCC+AGG + Chr4:88706045-88706064 MsG0480023697.01.T01:intron 40.0%
CTAATGAAGGGTTGCTAATC+TGG - Chr4:88703190-88703209 None:intergenic 40.0%
CTAATTAGAGACTGAATGCC+TGG - Chr4:88707995-88708014 None:intergenic 40.0%
CTCTCGTGATCTTGATTTAG+TGG + Chr4:88703521-88703540 MsG0480023697.01.T01:intron 40.0%
CTGAAATAGATGCAGTTGCT+TGG + Chr4:88710659-88710678 MsG0480023697.01.T01:CDS 40.0%
GAAGAGAATCCCAAAGAGTA+GGG - Chr4:88704490-88704509 None:intergenic 40.0%
GAATGAGGATCCTGCAATTA+TGG + Chr4:88710585-88710604 MsG0480023697.01.T01:CDS 40.0%
GAGAACAAGCTGACTGAATT+GGG + Chr4:88706700-88706719 MsG0480023697.01.T01:intron 40.0%
GAGGAAAATCGTTGAATCGT+GGG - Chr4:88706141-88706160 None:intergenic 40.0%
GATGAAACGGATAGAGAAAC+CGG + Chr4:88705073-88705092 MsG0480023697.01.T01:CDS 40.0%
GCCTTCCATATTGAGGATAT+GGG + Chr4:88707341-88707360 MsG0480023697.01.T01:intron 40.0%
GCTGCCATCAACATTAAGAA+TGG - Chr4:88703168-88703187 None:intergenic 40.0%
GGGCAAGTTATATGCAATCA+TGG + Chr4:88708328-88708347 MsG0480023697.01.T01:intron 40.0%
GGGTTATGCTATAAACTCGA+GGG - Chr4:88707546-88707565 None:intergenic 40.0%
GGTTATGCTATAAACTCGAG+GGG - Chr4:88707545-88707564 None:intergenic 40.0%
GGTTGAGTTAGTGTTAAGGT+TGG + Chr4:88707176-88707195 MsG0480023697.01.T01:intron 40.0%
GTAATCAAGTCCAAGATTCC+AGG + Chr4:88707974-88707993 MsG0480023697.01.T01:intron 40.0%
GTTATGCTATAAACTCGAGG+GGG - Chr4:88707544-88707563 None:intergenic 40.0%
GTTGAAATGTGCAGAGCTTT+CGG + Chr4:88709099-88709118 MsG0480023697.01.T01:intron 40.0%
GTTTGACAAGCAGCTTTCAA+TGG + Chr4:88708566-88708585 MsG0480023697.01.T01:CDS 40.0%
TCATTCGCTATTAAAGGACC+TGG + Chr4:88708891-88708910 MsG0480023697.01.T01:CDS 40.0%
TCCACTCTAGTTACAATCAG+GGG + Chr4:88708675-88708694 MsG0480023697.01.T01:CDS 40.0%
TCTAATAGATGGAACGGTTC+CGG - Chr4:88704376-88704395 None:intergenic 40.0%
TGAAGCAATACCCTGGTTTA+CGG + Chr4:88709765-88709784 MsG0480023697.01.T01:CDS 40.0%
TGACATGTCTTTCCTGTACA+CGG + Chr4:88705439-88705458 MsG0480023697.01.T01:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - Chr4:88710061-88710080 None:intergenic 40.0%
TGGGTATCATTCTATGGCAT+TGG + Chr4:88707196-88707215 MsG0480023697.01.T01:intron 40.0%
TGTTTATTGTCAAGTACGGG+AGG + Chr4:88710337-88710356 MsG0480023697.01.T01:intron 40.0%
TTGAAATGTGCAGAGCTTTC+GGG + Chr4:88709100-88709119 MsG0480023697.01.T01:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG - Chr4:88710062-88710081 None:intergenic 40.0%
TTGTGAAGCTGCAAAACAAG+TGG - Chr4:88704694-88704713 None:intergenic 40.0%
! ACTTTTGCTTGCTCAGATGT+TGG + Chr4:88707640-88707659 MsG0480023697.01.T01:intron 40.0%
! ATAGCCTTAAAACCGTGTAC+AGG - Chr4:88705454-88705473 None:intergenic 40.0%
! CAACGATTTTCATGGTTGGA+GGG + Chr4:88706186-88706205 MsG0480023697.01.T01:intron 40.0%
! CTTTCCTGTACACGGTTTTA+AGG + Chr4:88705447-88705466 MsG0480023697.01.T01:intron 40.0%
! CTTTTAGGCGAAAGAACCAT+TGG + Chr4:88706777-88706796 MsG0480023697.01.T01:intron 40.0%
! GACAAGGTAACCAATGGTTT+TGG - Chr4:88708127-88708146 None:intergenic 40.0%
! GGTCTCTTCAACGATTTTCA+TGG + Chr4:88706178-88706197 MsG0480023697.01.T01:intron 40.0%
! GGTCTGCAAAGAGTATATAC+AGG - Chr4:88710545-88710564 None:intergenic 40.0%
! GTTTTGCTTATAGTGAACGG+AGG + Chr4:88710174-88710193 MsG0480023697.01.T01:intron 40.0%
! TATGTTTATGGAGGAGTGTG+TGG - Chr4:88704262-88704281 None:intergenic 40.0%
! TCAACGATTTTCATGGTTGG+AGG + Chr4:88706185-88706204 MsG0480023697.01.T01:intron 40.0%
! TGCAATTATCATTCGGTGGT+AGG - Chr4:88705882-88705901 None:intergenic 40.0%
! TTCTGGAAAATCCTCCGTAT+TGG + Chr4:88704538-88704557 MsG0480023697.01.T01:CDS 40.0%
!! ACTGTTAGCCTTCCATATTG+AGG + Chr4:88707334-88707353 MsG0480023697.01.T01:intron 40.0%
!! AGCAAGGATTAATCGGTTTG+AGG - Chr4:88707519-88707538 None:intergenic 40.0%
!! AGTACAGAAGCATCATCTTG+TGG + Chr4:88705289-88705308 MsG0480023697.01.T01:intron 40.0%
!! GGAACCTGGTTTTCATTTAC+TGG + Chr4:88709701-88709720 MsG0480023697.01.T01:intron 40.0%
!! TGTATGGATGGTAATGGTGA+TGG + Chr4:88705013-88705032 MsG0480023697.01.T01:intron 40.0%
!!! ACTTTTTTTATGGGACTCGG+TGG - Chr4:88705978-88705997 None:intergenic 40.0%
!!! CTTTTTTTATGGGACTCGGT+GGG - Chr4:88705977-88705996 None:intergenic 40.0%
!!! GATCACTTTTTCACTGAGCT+AGG + Chr4:88710377-88710396 MsG0480023697.01.T01:intron 40.0%
!!! TTTTTTTATGGGACTCGGTG+GGG - Chr4:88705976-88705995 None:intergenic 40.0%
ACAACTCCAGTCTCTTTGCA+AGG - Chr4:88710624-88710643 None:intergenic 45.0%
ACACATACACGCCATCAAGA+TGG - Chr4:88708388-88708407 None:intergenic 45.0%
ACGGTTCCGGTAAGAGTTAT+CGG - Chr4:88704363-88704382 None:intergenic 45.0%
AGACTGAATGCCTGGAATCT+TGG - Chr4:88707987-88708006 None:intergenic 45.0%
CAAAAGGGCAACACTACAAC+TGG + Chr4:88709841-88709860 MsG0480023697.01.T01:CDS 45.0%
CAAAGCTGTTAGTGAGACTC+TGG + Chr4:88708918-88708937 MsG0480023697.01.T01:CDS 45.0%
CAACTCACACCTTTACAACC+TGG - Chr4:88706066-88706085 None:intergenic 45.0%
CAATCTCACTCTGCGTATTC+AGG + Chr4:88710248-88710267 MsG0480023697.01.T01:intron 45.0%
CACTGAGCTAGGAAAAATGG+AGG + Chr4:88710388-88710407 MsG0480023697.01.T01:intron 45.0%
CAGCTTCACAAGAGTGATGA+GGG + Chr4:88704703-88704722 MsG0480023697.01.T01:CDS 45.0%
CAGTAATGACGACAAACGCT+TGG - Chr4:88710566-88710585 None:intergenic 45.0%
CATCTTATTGCTCCAGAGCA+AGG + Chr4:88708633-88708652 MsG0480023697.01.T01:CDS 45.0%
CTACGACGTTCCATAATTGC+AGG - Chr4:88710598-88710617 None:intergenic 45.0%
CTATTTCAGCTTGGGCACTT+CGG - Chr4:88710648-88710667 None:intergenic 45.0%
CTGGAGCAATAAGATGAGGT+TGG - Chr4:88708629-88708648 None:intergenic 45.0%
CTTCCTCAAGATGTGGACAA+GGG + Chr4:88709908-88709927 MsG0480023697.01.T01:CDS 45.0%
GAACAGATTTAGGCCCTGTT+TGG - Chr4:88709487-88709506 None:intergenic 45.0%
GAAGCAATACCCTGGTTTAC+GGG + Chr4:88709766-88709785 MsG0480023697.01.T01:CDS 45.0%
GATCTAGTAGATCAGATCGC+CGG - Chr4:88704337-88704356 None:intergenic 45.0%
GATTTCTTACCTCGTGGATC+AGG + Chr4:88704578-88704597 MsG0480023697.01.T01:CDS 45.0%
GCAATTATGGAACGTCGTAG+TGG + Chr4:88710598-88710617 MsG0480023697.01.T01:CDS 45.0%
GCAGCCGAACTGTATAATTC+TGG + Chr4:88706437-88706456 MsG0480023697.01.T01:intron 45.0%
GCCCATATCCTCAATATGGA+AGG - Chr4:88707345-88707364 None:intergenic 45.0%
GGAAGAGAATCCCAAAGAGT+AGG - Chr4:88704491-88704510 None:intergenic 45.0%
GGAGAACAAGCTGACTGAAT+TGG + Chr4:88706699-88706718 MsG0480023697.01.T01:intron 45.0%
GGCAAAGATTTCTTACCTCG+TGG + Chr4:88704572-88704591 MsG0480023697.01.T01:CDS 45.0%
GGTCAAAAACGGTTCACCAT+GGG + Chr4:88706090-88706109 MsG0480023697.01.T01:intron 45.0%
TAGTGCACTCCCTACTCTTT+GGG + Chr4:88704478-88704497 MsG0480023697.01.T01:CDS 45.0%
TATGGAGTCTGGCTATCTGA+CGG + Chr4:88709868-88709887 MsG0480023697.01.T01:CDS 45.0%
TCAGGCCCATATCCTCAATA+TGG - Chr4:88707349-88707368 None:intergenic 45.0%
TCTCTTGGATCTCCTCAATG+TGG + Chr4:88703497-88703516 MsG0480023697.01.T01:intron 45.0%
TGACACTCATCGATCTTCCT+GGG + Chr4:88705384-88705403 MsG0480023697.01.T01:CDS 45.0%
TGCTTGCTCAGATGTTGGAA+GGG + Chr4:88707645-88707664 MsG0480023697.01.T01:intron 45.0%
TGTTCACAACACCGATCCAA+GGG - Chr4:88707691-88707710 None:intergenic 45.0%
TTCTTGCAGTTCTTCTGCAC+AGG + Chr4:88709629-88709648 MsG0480023697.01.T01:intron 45.0%
TTGACACTCATCGATCTTCC+TGG + Chr4:88705383-88705402 MsG0480023697.01.T01:CDS 45.0%
TTGCTTGCTCAGATGTTGGA+AGG + Chr4:88707644-88707663 MsG0480023697.01.T01:intron 45.0%
! ATAACTTGCCCTGCATGTGA+TGG - Chr4:88708319-88708338 None:intergenic 45.0%
! CACTAACAGCTTTGTGAACC+AGG - Chr4:88708912-88708931 None:intergenic 45.0%
! CAGGATTTGAAGCAATACCC+TGG + Chr4:88709758-88709777 MsG0480023697.01.T01:intron 45.0%
! GAAAGCGCGTATGTTTATGG+AGG - Chr4:88704271-88704290 None:intergenic 45.0%
! GAGTGGATTCAATGAGACGA+CGG - Chr4:88708662-88708681 None:intergenic 45.0%
! GGTGAAAGCGCGTATGTTTA+TGG - Chr4:88704274-88704293 None:intergenic 45.0%
! GTAACTGGTGAGGTTGATTG+AGG - Chr4:88703146-88703165 None:intergenic 45.0%
! TAATTTGTGTAGCTGCGGTG+AGG + Chr4:88705038-88705057 MsG0480023697.01.T01:intron 45.0%
! TGTTGGAAGGGAGAGCATAT+AGG + Chr4:88707657-88707676 MsG0480023697.01.T01:CDS 45.0%
!! GAGAAAGAGGAAGGTGTTGA+AGG - Chr4:88704295-88704314 None:intergenic 45.0%
!! GAGAACTTATGTGGTAGTGG+TGG + Chr4:88708781-88708800 MsG0480023697.01.T01:intron 45.0%
!! TCCGTATTGGAGAGTGTTGT+CGG + Chr4:88704551-88704570 MsG0480023697.01.T01:CDS 45.0%
!! TCTCTAGTGTTGGTTTCCCA+TGG - Chr4:88706109-88706128 None:intergenic 45.0%
!! TGAGACTCTGGTTTGTTCCT+GGG + Chr4:88708930-88708949 MsG0480023697.01.T01:intron 45.0%
!! TGCTCTGGAGCAATAAGATG+AGG - Chr4:88708633-88708652 None:intergenic 45.0%
!!! GGAAGCGTTTTCTCTAGTGT+TGG - Chr4:88706119-88706138 None:intergenic 45.0%
!!! TGGGCATTGGCAATGACTTT+TGG + Chr4:88709579-88709598 MsG0480023697.01.T01:intron 45.0%
!!! TATTTTTTTTTTATACAATT+GGG + Chr4:88704601-88704620 MsG0480023697.01.T01:intron 5.0%
AATCGTTGAAGAGACCGGAG+TGG - Chr4:88706174-88706193 None:intergenic 50.0%
ACTGCTTTGCCATCACATGC+AGG + Chr4:88708307-88708326 MsG0480023697.01.T01:intron 50.0%
AGATCCAAGAGATCGTGAGG+AGG - Chr4:88703489-88703508 None:intergenic 50.0%
AGATTCACCGTGGTCACCTA+AGG - Chr4:88704459-88704478 None:intergenic 50.0%
AGGAGATCCAAGAGATCGTG+AGG - Chr4:88703492-88703511 None:intergenic 50.0%
ATCCAAGAGATCGTGAGGAG+GGG - Chr4:88703487-88703506 None:intergenic 50.0%
CAACTGGTCGATATGGAGTC+TGG + Chr4:88709857-88709876 MsG0480023697.01.T01:CDS 50.0%
CAGACCCCATTCTGTTAGCT+AGG - Chr4:88707804-88707823 None:intergenic 50.0%
CTAGTGCACTCCCTACTCTT+TGG + Chr4:88704477-88704496 MsG0480023697.01.T01:CDS 50.0%
CTGAGTTTCTTCACCTTCCG+AGG + Chr4:88704740-88704759 MsG0480023697.01.T01:CDS 50.0%
CTGCTTTGCCATCACATGCA+GGG + Chr4:88708308-88708327 MsG0480023697.01.T01:intron 50.0%
CTGTTCACAACACCGATCCA+AGG - Chr4:88707692-88707711 None:intergenic 50.0%
CTTTCCCAAACGAGCCAGTT+CGG - Chr4:88708041-88708060 None:intergenic 50.0%
GACAACACTCTCCAATACGG+AGG - Chr4:88704552-88704571 None:intergenic 50.0%
GATCACGAGAGTCCACATTG+AGG - Chr4:88703512-88703531 None:intergenic 50.0%
GATCCAAGAGATCGTGAGGA+GGG - Chr4:88703488-88703507 None:intergenic 50.0%
GCAATGAAACAGCAGACCAG+AGG - Chr4:88709605-88709624 None:intergenic 50.0%
GCAGCTTCACAAGAGTGATG+AGG + Chr4:88704702-88704721 MsG0480023697.01.T01:CDS 50.0%
GCCCCTGATTGTAACTAGAG+TGG - Chr4:88708679-88708698 None:intergenic 50.0%
GCCGACAACACTCTCCAATA+CGG - Chr4:88704555-88704574 None:intergenic 50.0%
GCTTCCTCAAGATGTGGACA+AGG + Chr4:88709907-88709926 MsG0480023697.01.T01:CDS 50.0%
GGGGGTGAGCAAGGATTAAT+CGG - Chr4:88707526-88707545 None:intergenic 50.0%
GGGTCAAAAACGGTTCACCA+TGG + Chr4:88706089-88706108 MsG0480023697.01.T01:intron 50.0%
GGTTCGCTCCTACATTGAGA+AGG + Chr4:88705579-88705598 MsG0480023697.01.T01:CDS 50.0%
TACCGGTAGGATCCACTTCA+CGG - Chr4:88706515-88706534 None:intergenic 50.0%
TCAATTTCCTACAGGCGACC+TGG + Chr4:88708483-88708502 MsG0480023697.01.T01:intron 50.0%
TCGGAAGCTTCCTCAAGATG+TGG + Chr4:88709901-88709920 MsG0480023697.01.T01:CDS 50.0%
TCTGGCGAAGATGCTCTCAA+AGG + Chr4:88707828-88707847 MsG0480023697.01.T01:intron 50.0%
TTACGGCGAGGAAGAGAAAG+AGG - Chr4:88704308-88704327 None:intergenic 50.0%
! AACCAAGGAGCCTGACTTGA+TGG - Chr4:88707160-88707179 None:intergenic 50.0%
! ATCGCGCCGATAACTCTTAC+CGG + Chr4:88704354-88704373 MsG0480023697.01.T01:intron 50.0%
! CGGAGGATTTTCCAGAACTC+TGG - Chr4:88704535-88704554 None:intergenic 50.0%
! CGGTGAATCTTTTCCTCGGA+AGG - Chr4:88704756-88704775 None:intergenic 50.0%
! GCAACCTTTTCAGAGCAGCA+GGG - Chr4:88708545-88708564 None:intergenic 50.0%
! TAGTGGCCTTGCAAAGAGAC+TGG + Chr4:88710615-88710634 MsG0480023697.01.T01:CDS 50.0%
! TATGGAGGAGTGTGTGGACT+TGG - Chr4:88704256-88704275 None:intergenic 50.0%
! TGCAACCTTTTCAGAGCAGC+AGG - Chr4:88708546-88708565 None:intergenic 50.0%
! TGCTGGTGCTCTTATTTCGC+CGG + Chr4:88709018-88709037 MsG0480023697.01.T01:intron 50.0%
! TGGCAATGACTTTTGGCCTC+TGG + Chr4:88709586-88709605 MsG0480023697.01.T01:intron 50.0%
!! GAAACCGAACTGGCTCGTTT+GGG + Chr4:88708034-88708053 MsG0480023697.01.T01:CDS 50.0%
!! GTGAGACTCTGGTTTGTTCC+TGG + Chr4:88708929-88708948 MsG0480023697.01.T01:intron 50.0%
!! TGAAACCGAACTGGCTCGTT+TGG + Chr4:88708033-88708052 MsG0480023697.01.T01:CDS 50.0%
AAGCCTGTTGCAGCTGATGC+TGG + Chr4:88708058-88708077 MsG0480023697.01.T01:CDS 55.0%
ACCGGTAGGATCCACTTCAC+GGG - Chr4:88706514-88706533 None:intergenic 55.0%
AGAACTCTGGCCACCAACGA+CGG - Chr4:88704522-88704541 None:intergenic 55.0%
AGACGACGGTATCCTTGCTC+TGG - Chr4:88708648-88708667 None:intergenic 55.0%
AGCCTGTTGCAGCTGATGCT+GGG + Chr4:88708059-88708078 MsG0480023697.01.T01:CDS 55.0%
ATTTCCTACAGGCGACCTGG+AGG + Chr4:88708486-88708505 MsG0480023697.01.T01:intron 55.0%
CAAAGAGCTTGCACCGCCTT+AGG + Chr4:88704440-88704459 MsG0480023697.01.T01:CDS 55.0%
CAACCTCAGCCCGTAAACCA+GGG - Chr4:88709778-88709797 None:intergenic 55.0%
CAGAATGGGGTCTGAGCATC+TGG + Chr4:88707810-88707829 MsG0480023697.01.T01:intron 55.0%
CCACCCTTGTCCACATCTTG+AGG - Chr4:88709914-88709933 None:intergenic 55.0%
CCTCAAGATGTGGACAAGGG+TGG + Chr4:88709911-88709930 MsG0480023697.01.T01:CDS 55.0%
CGATCTTCCTGGGCTTACGA+AGG + Chr4:88705394-88705413 MsG0480023697.01.T01:CDS 55.0%
CTAAGGCGGTGCAAGCTCTT+TGG - Chr4:88704442-88704461 None:intergenic 55.0%
CTCCATCAAGTCAGGCTCCT+TGG + Chr4:88707155-88707174 MsG0480023697.01.T01:intron 55.0%
GGAGTGCACTAGATTCACCG+TGG - Chr4:88704469-88704488 None:intergenic 55.0%
GGCGAGGAAGAGAAAGAGGA+AGG - Chr4:88704304-88704323 None:intergenic 55.0%
GTAGATCAGATCGCCGGTGA+CGG - Chr4:88704331-88704350 None:intergenic 55.0%
TAAACTCGAGGGGGTGAGCA+AGG - Chr4:88707535-88707554 None:intergenic 55.0%
TACCGCATCAACAGCTGCCT+CGG - Chr4:88708706-88708725 None:intergenic 55.0%
TCATCCGCCTCCATCAAGTC+AGG + Chr4:88707147-88707166 MsG0480023697.01.T01:intron 55.0%
TCCCGTGAAGTGGATCCTAC+CGG + Chr4:88706510-88706529 MsG0480023697.01.T01:CDS 55.0%
TTCACCGTGGTCACCTAAGG+CGG - Chr4:88704456-88704475 None:intergenic 55.0%
TTCCCCTCCTCACGATCTCT+TGG + Chr4:88703482-88703501 MsG0480023697.01.T01:intron 55.0%
TTGTGTAGCTGCGGTGAGGA+AGG + Chr4:88705042-88705061 MsG0480023697.01.T01:intron 55.0%
! ATACCCTGGTTTACGGGCTG+AGG + Chr4:88709772-88709791 MsG0480023697.01.T01:CDS 55.0%
! CAAGGAGCCTGACTTGATGG+AGG - Chr4:88707157-88707176 None:intergenic 55.0%
! CTGGTGCTCTTATTTCGCCG+GGG + Chr4:88709020-88709039 MsG0480023697.01.T01:intron 55.0%
! CTGGTTTACGGGCTGAGGTT+GGG + Chr4:88709777-88709796 MsG0480023697.01.T01:CDS 55.0%
! GCTGGTGCTCTTATTTCGCC+GGG + Chr4:88709019-88709038 MsG0480023697.01.T01:intron 55.0%
! TGGTTTACGGGCTGAGGTTG+GGG + Chr4:88709778-88709797 MsG0480023697.01.T01:CDS 55.0%
! TTTTCAGAGCAGCAGGGAGC+TGG - Chr4:88708539-88708558 None:intergenic 55.0%
!! AGCTCCCTGCTGCTCTGAAA+AGG + Chr4:88708538-88708557 MsG0480023697.01.T01:CDS 55.0%
ACAGCGACCTTCGTAAGCCC+AGG - Chr4:88705404-88705423 None:intergenic 60.0%
ACCCCAGCATCAGCTGCAAC+AGG - Chr4:88708064-88708083 None:intergenic 60.0%
ATCACCTCCAGGTCGCCTGT+AGG - Chr4:88708493-88708512 None:intergenic 60.0%
CATCAACAGCTGCCTCGGCA+GGG - Chr4:88708701-88708720 None:intergenic 60.0%
CCAACCTCAGCCCGTAAACC+AGG - Chr4:88709779-88709798 None:intergenic 60.0%
CCTCTGCGTGCTTACCACTC+CGG + Chr4:88706157-88706176 MsG0480023697.01.T01:intron 60.0%
CTTCCTGCTATCGCCGTCGT+TGG + Chr4:88704506-88704525 MsG0480023697.01.T01:CDS 60.0%
GCCTGTTGCAGCTGATGCTG+GGG + Chr4:88708060-88708079 MsG0480023697.01.T01:CDS 60.0%
GGGCTTACGAAGGTCGCTGT+AGG + Chr4:88705404-88705423 MsG0480023697.01.T01:CDS 60.0%
TGCACCGCCTTAGGTGACCA+CGG + Chr4:88704449-88704468 MsG0480023697.01.T01:CDS 60.0%
TGCCGAGGCAGCTGTTGATG+CGG + Chr4:88708701-88708720 MsG0480023697.01.T01:CDS 60.0%
TTCCTCGCCGTAACCGTCAC+CGG + Chr4:88704315-88704334 MsG0480023697.01.T01:intron 60.0%
! CAGATCGCCGGTGACGGTTA+CGG - Chr4:88704325-88704344 None:intergenic 60.0%
! CCTGGTTTACGGGCTGAGGT+TGG + Chr4:88709776-88709795 MsG0480023697.01.T01:CDS 60.0%
! GGAGCCTGACTTGATGGAGG+CGG - Chr4:88707154-88707173 None:intergenic 60.0%
!! GTCGTTGGTGGCCAGAGTTC+TGG + Chr4:88704521-88704540 MsG0480023697.01.T01:CDS 60.0%
CCACCAACGACGGCGATAGC+AGG - Chr4:88704512-88704531 None:intergenic 65.0%
CCGGAGTGGTAAGCACGCAG+AGG - Chr4:88706160-88706179 None:intergenic 65.0%
CCTGCTATCGCCGTCGTTGG+TGG + Chr4:88704509-88704528 MsG0480023697.01.T01:CDS 65.0%
GCATCAACAGCTGCCTCGGC+AGG - Chr4:88708702-88708721 None:intergenic 65.0%
TACAATCAGGGGCCCTGCCG+AGG + Chr4:88708686-88708705 MsG0480023697.01.T01:CDS 65.0%
! CGCCGGTGACGGTTACGGCG+AGG - Chr4:88704320-88704339 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 88702855 88710690 88702855 ID=MsG0480023697.01;Name=MsG0480023697.01
Chr4 mRNA 88702855 88710690 88702855 ID=MsG0480023697.01.T01;Parent=MsG0480023697.01;Name=MsG0480023697.01.T01;_AED=0.44;_eAED=0.47;_QI=0|0.78|0.66|1|0.85|0.8|15|0|574
Chr4 exon 88702855 88702926 88702855 ID=MsG0480023697.01.T01:exon:7673;Parent=MsG0480023697.01.T01
Chr4 exon 88704395 88704599 88704395 ID=MsG0480023697.01.T01:exon:7674;Parent=MsG0480023697.01.T01
Chr4 exon 88704674 88704781 88704674 ID=MsG0480023697.01.T01:exon:7675;Parent=MsG0480023697.01.T01
Chr4 exon 88705050 88705151 88705050 ID=MsG0480023697.01.T01:exon:7676;Parent=MsG0480023697.01.T01
Chr4 exon 88705375 88705425 88705375 ID=MsG0480023697.01.T01:exon:7677;Parent=MsG0480023697.01.T01
Chr4 exon 88705539 88705600 88705539 ID=MsG0480023697.01.T01:exon:7678;Parent=MsG0480023697.01.T01
Chr4 exon 88706441 88706531 88706441 ID=MsG0480023697.01.T01:exon:7679;Parent=MsG0480023697.01.T01
Chr4 exon 88706784 88706848 88706784 ID=MsG0480023697.01.T01:exon:7680;Parent=MsG0480023697.01.T01
Chr4 exon 88707656 88707782 88707656 ID=MsG0480023697.01.T01:exon:7681;Parent=MsG0480023697.01.T01
Chr4 exon 88707975 88708081 88707975 ID=MsG0480023697.01.T01:exon:7682;Parent=MsG0480023697.01.T01
Chr4 exon 88708329 88708399 88708329 ID=MsG0480023697.01.T01:exon:7683;Parent=MsG0480023697.01.T01
Chr4 exon 88708497 88708722 88708497 ID=MsG0480023697.01.T01:exon:7684;Parent=MsG0480023697.01.T01
Chr4 exon 88708889 88708939 88708889 ID=MsG0480023697.01.T01:exon:7685;Parent=MsG0480023697.01.T01
Chr4 exon 88709761 88709989 88709761 ID=MsG0480023697.01.T01:exon:7686;Parent=MsG0480023697.01.T01
Chr4 exon 88710533 88710690 88710533 ID=MsG0480023697.01.T01:exon:7687;Parent=MsG0480023697.01.T01
Chr4 CDS 88702855 88702926 88702855 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88704395 88704599 88704395 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88704674 88704781 88704674 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88705050 88705151 88705050 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88705375 88705425 88705375 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88705539 88705600 88705539 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88706441 88706531 88706441 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88706784 88706848 88706784 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88707656 88707782 88707656 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88707975 88708081 88707975 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88708329 88708399 88708329 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88708497 88708722 88708497 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88708889 88708939 88708889 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88709761 88709989 88709761 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Chr4 CDS 88710533 88710690 88710533 ID=MsG0480023697.01.T01:cds;Parent=MsG0480023697.01.T01
Gene Sequence

>MsG0480023697.01.T01

ATGCATGTAAAACTAGATTCCATTGTTAAGACAAGCATGTATCTTCTCGTATTTCATATCAATATCAATGGAATCCGATCTAATATGGAAAACCTAATCTCATTAGTCAACAAAATCCAAAGAGCTTGCACCGCCTTAGGTGACCACGGTGAATCTAGTGCACTCCCTACTCTTTGGGATTCTCTTCCTGCTATCGCCGTCGTTGGTGGCCAGAGTTCTGGAAAATCCTCCGTATTGGAGAGTGTTGTCGGCAAAGATTTCTTACCTCGTGGATCAGGGATCGTTACTCGGAGACCACTTGTTTTGCAGCTTCACAAGAGTGATGAGGGAACAAGAGAATATGCTGAGTTTCTTCACCTTCCGAGGAAAAGATTCACCGATTTTGCTGCGGTGAGGAAGGAAATTCAAGATGAAACGGATAGAGAAACCGGTCGATCCAAACAAATTTCAACTGTCCCTATTCATCTTAGCATATATTCTCCCAATGTTGTTAACTTGACACTCATCGATCTTCCTGGGCTTACGAAGGTCGCTGTAGATGGGCAACCTGAGAGTATTGTGCATGACATTGAGAATATGGTTCGCTCCTACATTGAGAAGCCGAACTGTATAATTCTGGCTATTTCGCCGGCTAATCAAGATATTGCAACATCTGATGCAATTAAAATTTCCCGTGAAGTGGATCCTACCGGCGAAAGAACCATTGGAGTTTTGACGAAGATTGATCTAATGGACAAGGGTACCGATGCTGTTGATATGTTGGAAGGGAGAGCATATAGGTTAAAGTTCCCTTGGATCGGTGTTGTGAACAGATCACAAGCAGACATAAACAAGAATGTTGACATGATTGCTGCAAGGCGTAGAGAACGTGAATACTTTAATATAATCAAGTCCAAGATTCCAGGCATTCAGTCTCTAATTAGCAAAACAATAAATGAAATTGAAACCGAACTGGCTCGTTTGGGAAAGCCTGTTGCAGCTGATGCTGGGGGCAAGTTATATGCAATCATGGAAATATGTCGCTCATTTGATCAAATATTCAAAGACCATCTTGATGGCGTGCGACCTGGAGGTGATAAAATTTATAACGTCTTTGACAACCAGCTCCCTGCTGCTCTGAAAAGGTTGCAGTTTGACAAGCAGCTTTCAATGGAAAATATAAGGAAACTTATTACAGAAGCTGATGGATACCAACCTCATCTTATTGCTCCAGAGCAAGGATACCGTCGTCTCATTGAATCCACTCTAGTTACAATCAGGGGCCCTGCCGAGGCAGCTGTTGATGCGGTTCATTCGCTATTAAAGGACCTGGTTCACAAAGCTGTTAGTGAGACTCTGGATTTGAAGCAATACCCTGGTTTACGGGCTGAGGTTGGGGCTGCAGCTATTGATTCGTTAGATAGAATGAGAGATGAAAGCAAAAGGGCAACACTACAACTGGTCGATATGGAGTCTGGCTATCTGACGGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTGGACAAGGGTGGCAACCCCACTCATTCAATTTTCGATAGATATAATGATTCTTATCTAAGGCGAATCGCGTTGTCTGCCTGTATATACTCTTTGCAGACCAAGCGTTTGTCGTCATTACTGAATGAGGATCCTGCAATTATGGAACGTCGTAGTGGCCTTGCAAAGAGACTGGAGTTGTACCGAAGTGCCCAAGCTGAAATAGATGCAGTTGCTTGGTCTAAGTAA
Protein sequence

>MsG0480023697.01.T01

MHVKLDSIVKTSMYLLVFHININGIRSNMENLISLVNKIQRACTALGDHGESSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKSDEGTREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRSKQISTVPIHLSIYSPNVVNLTLIDLPGLTKVAVDGQPESIVHDIENMVRSYIEKPNCIILAISPANQDIATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVDMLEGRAYRLKFPWIGVVNRSQADINKNVDMIAARRREREYFNIIKSKIPGIQSLISKTINEIETELARLGKPVAADAGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESTLVTIRGPAEAAVDAVHSLLKDLVHKAVSETLDLKQYPGLRAEVGAAAIDSLDRMRDESKRATLQLVDMESGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIALSACIYSLQTKRLSSLLNEDPAIMERRSGLAKRLELYRSAQAEIDAVAWSK*