AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016034.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016034.01.T01 MTR_3g082140 99.697 659 2 0 102 760 1 659 0.0 1348
MsG0380016034.01.T01 MTR_5g098730 87.500 664 79 2 101 760 2 665 0.0 1187
MsG0380016034.01.T01 MTR_0204s0010 74.889 450 106 3 315 760 2 448 0.0 690
MsG0380016034.01.T01 MTR_1g014080 44.190 654 319 13 121 760 16 637 1.48e-179 528
MsG0380016034.01.T01 MTR_8g016270 42.729 667 320 13 116 760 22 648 1.08e-178 526
MsG0380016034.01.T01 MTR_3g105950 43.857 643 321 15 129 760 23 636 1.53e-176 520
MsG0380016034.01.T01 MTR_6g074910 26.974 608 366 15 161 760 51 588 1.52e-75 256
MsG0380016034.01.T01 MTR_8g088730 30.189 636 359 19 137 760 27 589 1.79e-66 231
MsG0380016034.01.T01 MTR_5g077170 29.561 433 286 8 339 760 167 591 2.39e-65 228
MsG0380016034.01.T01 MTR_2g006300 30.599 634 357 18 137 760 23 583 8.00e-64 224
MsG0380016034.01.T01 MTR_4g116770 55.747 174 73 3 124 295 19 190 4.88e-57 207
MsG0380016034.01.T01 MTR_4g053270 25.908 633 384 14 137 758 29 587 4.97e-56 202
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016034.01.T01 AT4G12650 84.746 649 99 0 112 760 4 652 0.0 1110
MsG0380016034.01.T01 AT5G35160 70.122 656 180 9 114 760 10 658 0.0 903
MsG0380016034.01.T01 AT5G35160 70.122 656 180 9 114 760 10 658 0.0 903
MsG0380016034.01.T01 AT5G35160 70.122 656 180 9 114 760 10 658 0.0 903
MsG0380016034.01.T01 AT5G35160 66.616 656 175 10 114 760 10 630 0.0 840
MsG0380016034.01.T01 AT3G13772 44.427 646 315 12 128 760 27 641 8.64e-180 529
MsG0380016034.01.T01 AT5G10840 43.373 664 319 12 117 760 22 648 1.90e-179 528
MsG0380016034.01.T01 AT5G25100 42.944 659 317 12 124 760 23 644 2.52e-178 525
MsG0380016034.01.T01 AT5G25100 42.492 666 317 13 124 760 23 651 1.33e-175 519
MsG0380016034.01.T01 AT1G55130 43.243 666 319 15 115 760 11 637 1.88e-173 513
MsG0380016034.01.T01 AT2G24170 43.364 648 321 13 127 760 22 637 3.29e-173 512
MsG0380016034.01.T01 AT2G24170 39.871 464 237 10 112 564 8 440 6.35e-107 334
MsG0380016034.01.T01 AT5G37310 25.822 639 384 13 137 760 30 593 1.60e-71 245
MsG0380016034.01.T01 AT5G37310 25.822 639 384 13 137 760 30 593 1.60e-71 245
MsG0380016034.01.T01 AT1G08350 28.100 637 378 16 133 760 24 589 3.99e-71 244
MsG0380016034.01.T01 AT1G08350 28.100 637 378 16 133 760 24 589 3.99e-71 244
MsG0380016034.01.T01 AT2G01970 25.827 635 389 17 137 760 29 592 3.56e-70 241
MsG0380016034.01.T01 AT1G14670 26.772 635 383 17 137 760 29 592 9.18e-69 238
MsG0380016034.01.T01 AT1G08350 27.604 576 340 13 193 760 2 508 3.32e-61 214
MsG0380016034.01.T01 AT1G10950 34.845 419 258 9 351 760 177 589 8.86e-61 216
MsG0380016034.01.T01 AT1G08350 27.458 590 338 17 133 713 24 532 6.30e-59 209

Find 217 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCCTCATTGGAGGATTTA+TGG 0.127691 3:+78180969 MsG0380016034.01.T01:CDS
AATTGATGGATGATTGTTTA+AGG 0.163035 3:-78181630 None:intergenic
CCATCTTGGCTTCTTGTTCT+TGG 0.166392 3:+78181066 MsG0380016034.01.T01:CDS
TTGTTGTAGGTGATGTATTT+AGG 0.176781 3:+78180560 MsG0380016034.01.T01:CDS
AAGATGCTTGGTTAAATTAA+TGG 0.199175 3:-78173657 None:intergenic
CAGATGAATGAGGAGCTTTC+TGG 0.202570 3:+78180529 MsG0380016034.01.T01:CDS
GGGAGAGGGGTTGAAATTAT+TGG 0.216866 3:+78180079 MsG0380016034.01.T01:CDS
TTGTGCTTTGCCATGGCTTC+GGG 0.225171 3:-78180208 None:intergenic
ATGAGGTATACTAGCCAAAA+TGG 0.243880 3:+78179947 MsG0380016034.01.T01:CDS
TAATAACCATCAGTGAATTT+AGG 0.244904 3:-78180414 None:intergenic
TTTACCTCGTGCTCATTTAA+TGG 0.250519 3:-78179860 None:intergenic
TGATATTTGTCAAGCTCATT+TGG 0.259243 3:-78180262 None:intergenic
GAACCAATACAGTGAATTTC+AGG 0.263787 3:-78180045 None:intergenic
TGTTGTAGGTGATGTATTTA+GGG 0.288063 3:+78180561 MsG0380016034.01.T01:CDS
AACTAAAGGAAAGCTGGTTT+TGG 0.288628 3:+78173739 MsG0380016034.01.T01:CDS
TAGTTTATCTAAGTTTCTTT+AGG 0.296994 3:+78181737 MsG0380016034.01.T01:three_prime_UTR
TGGGACTGGGGAGGAAGGTT+TGG 0.298276 3:+78180099 MsG0380016034.01.T01:CDS
TTTGTGCTTTGCCATGGCTT+CGG 0.299181 3:-78180209 None:intergenic
CACAGAAGCTTTGAGCATTC+AGG 0.304096 3:-78180586 None:intergenic
GGAGACGGGGTTCAAATTCT+TGG 0.305043 3:+78180619 MsG0380016034.01.T01:CDS
GGAATCTGATTGGTCCTTAC+AGG 0.306189 3:-78181018 None:intergenic
GAATCTTGGAGAACTTCTTA+TGG 0.307336 3:+78179763 MsG0380016034.01.T01:CDS
GTCGAAAACCAAGTAGTTAA+TGG 0.307699 3:-78181331 None:intergenic
TGGCTTCTTGTTCTTGGTGC+TGG 0.309717 3:+78181072 MsG0380016034.01.T01:CDS
CTGTAGTTGTCTTGCGTTCA+AGG 0.311910 3:+78179502 MsG0380016034.01.T01:CDS
ACGTCTATGGAGGATCATTA+AGG 0.318080 3:+78180768 MsG0380016034.01.T01:CDS
CAAGATGGATATTTCCTTGC+AGG 0.318478 3:-78181051 None:intergenic
GTGGAAACAAACATGAATTA+AGG 0.321793 3:+78173828 MsG0380016034.01.T01:CDS
TGGAAGGCATTCTATGCTTC+AGG 0.321818 3:+78181279 MsG0380016034.01.T01:CDS
GTGAAGATAGATTGAGGTTC+TGG 0.332966 3:+78181492 MsG0380016034.01.T01:exon
TCAAGTTATTTGTGGACAAT+AGG 0.340262 3:-78181947 None:intergenic
GGTGCTGGAACTCTTCCATT+TGG 0.344229 3:+78181087 MsG0380016034.01.T01:CDS
GCATTGCATTATAAAATTGA+TGG 0.347835 3:-78181644 None:intergenic
GGGACTGGGGAGGAAGGTTT+GGG 0.348959 3:+78180100 MsG0380016034.01.T01:CDS
ACCCTCATTGGAGGATTTAT+GGG 0.349270 3:+78180970 MsG0380016034.01.T01:CDS
CTTGTACTCCATTAACTACT+TGG 0.355872 3:+78181323 MsG0380016034.01.T01:CDS
TCTTTATCCTCTCTAGCATC+TGG 0.366159 3:+78181130 MsG0380016034.01.T01:CDS
TTGTCTTGCGTTCAAGGAAA+TGG 0.368213 3:+78179508 MsG0380016034.01.T01:CDS
AGCTCAAAATACAAGGAAAT+AGG 0.370394 3:-78180913 None:intergenic
TCCCGAGGGATGCTACTAAC+AGG 0.371067 3:+78180694 MsG0380016034.01.T01:CDS
AAGGGTGGAGATCAGTTTCT+TGG 0.372469 3:+78180800 MsG0380016034.01.T01:CDS
GGGAGGTTCTATTACGTGTT+TGG 0.373374 3:+78181156 MsG0380016034.01.T01:CDS
TCTGGGTGGAAACTTGTTGT+AGG 0.373553 3:+78180547 MsG0380016034.01.T01:CDS
TGGCTAGTATACCTCATAAC+TGG 0.373576 3:-78179941 None:intergenic
CCACCTGAAATTCACTGTAT+TGG 0.376316 3:+78180042 MsG0380016034.01.T01:CDS
TTATATCTTCTGTTCGTTCA+AGG 0.379880 3:+78181874 MsG0380016034.01.T01:three_prime_UTR
TGAGAAAACCTTTCATCTAC+TGG 0.385294 3:+78179543 MsG0380016034.01.T01:CDS
TTTGACAAGGTATGAGGAAT+TGG 0.388604 3:+78180489 MsG0380016034.01.T01:CDS
ATATATAGAAAATTGTTAGA+TGG 0.389167 3:+78181798 MsG0380016034.01.T01:three_prime_UTR
AGATGAATGAGGAGCTTTCT+GGG 0.391466 3:+78180530 MsG0380016034.01.T01:CDS
GGAGAGGGGTTGAAATTATT+GGG 0.394962 3:+78180080 MsG0380016034.01.T01:CDS
GAATTAAGGAAGAGTGTTAG+AGG 0.395676 3:+78173842 MsG0380016034.01.T01:CDS
TGTTTGTTCATTATGTTTGT+GGG 0.398697 3:+78181841 MsG0380016034.01.T01:three_prime_UTR
ATGTTTGTTCATTATGTTTG+TGG 0.399575 3:+78181840 MsG0380016034.01.T01:three_prime_UTR
GCTATGTCAGCGTACGTCTA+TGG 0.401110 3:+78180755 MsG0380016034.01.T01:CDS
TGGAAGATTGGCGGTGGTGG+TGG 0.408547 3:+78181259 MsG0380016034.01.T01:CDS
GATATTTGTCAAGCTCATTT+GGG 0.415078 3:-78180261 None:intergenic
AAATGAGCTTGACAAATATC+AGG 0.416994 3:+78180264 MsG0380016034.01.T01:CDS
AAGAAAAGTGCTGAGAATCT+TGG 0.417086 3:+78179749 MsG0380016034.01.T01:CDS
GCTGACAAGAAGAAGGCATC+TGG 0.417434 3:+78180136 MsG0380016034.01.T01:CDS
TCAGTACCTCTGACCCTCAT+TGG 0.419787 3:+78180958 MsG0380016034.01.T01:CDS
AATCTTGGAGAACTTCTTAT+GGG 0.420422 3:+78179764 MsG0380016034.01.T01:CDS
TGAGGTATACTAGCCAAAAT+GGG 0.429936 3:+78179948 MsG0380016034.01.T01:CDS
CTTAGAGATGAAGTAACTAA+AGG 0.430574 3:+78173725 MsG0380016034.01.T01:CDS
TCAGATGGAGTGTACCCAAC+AGG 0.435571 3:-78179995 None:intergenic
GGGGTCATATTTAATACTAC+AGG 0.438186 3:-78180188 None:intergenic
TTGGAATTAGCTTTGATTCA+CGG 0.440269 3:+78179464 MsG0380016034.01.T01:CDS
GACCAAGTATTATACTTATG+AGG 0.441259 3:+78181908 MsG0380016034.01.T01:three_prime_UTR
AAGAAGCATGATGTGATTAG+TGG 0.446313 3:+78173809 MsG0380016034.01.T01:CDS
GGGGTTGAAATTATTGGGAC+TGG 0.446999 3:+78180085 MsG0380016034.01.T01:CDS
ATTATTGGGACTGGGGAGGA+AGG 0.447718 3:+78180094 MsG0380016034.01.T01:CDS
CCTATGTTCTATAAGATGCT+TGG 0.450536 3:-78173669 None:intergenic
TGGAGGGTTCTCGAGTTCAT+TGG 0.450750 3:+78180383 MsG0380016034.01.T01:CDS
TTGACAACTTGCCAGTTATG+AGG 0.453115 3:+78179930 MsG0380016034.01.T01:CDS
AGTAGCATCCCTCGGGATGC+TGG 0.455292 3:-78180688 None:intergenic
CTGCAAGGAAATATCCATCT+TGG 0.455721 3:+78181052 MsG0380016034.01.T01:CDS
GGCATTAATATATTCTCCAT+TGG 0.457854 3:-78179642 None:intergenic
TTGGGATGCTTATTTGAAGA+TGG 0.459489 3:+78180363 MsG0380016034.01.T01:CDS
TAAGTGTGCATGTAGCTTCC+CGG 0.460219 3:-78179617 None:intergenic
GGAGGATTTATGGGGACAAA+AGG 0.471175 3:+78180979 MsG0380016034.01.T01:CDS
CTTCTGTTCGTTCAAGGATA+GGG 0.473738 3:+78181880 MsG0380016034.01.T01:three_prime_UTR
TCTCTGAACATAGTCATTCA+AGG 0.475914 3:+78181680 MsG0380016034.01.T01:three_prime_UTR
ATTGCAATCATGTTGTCAAC+TGG 0.476861 3:+78181417 MsG0380016034.01.T01:CDS
TCTTCTGTTCGTTCAAGGAT+AGG 0.477240 3:+78181879 MsG0380016034.01.T01:three_prime_UTR
TGTAGATTTGAAATCACTGT+TGG 0.479122 3:+78179445 MsG0380016034.01.T01:intron
CGTCTATGGAGGATCATTAA+GGG 0.482119 3:+78180769 MsG0380016034.01.T01:CDS
AGTGGACGGGGTACCCTGTT+GGG 0.483088 3:+78179981 MsG0380016034.01.T01:CDS
AATTTCCCGTGGAATCTGAT+TGG 0.483591 3:-78181028 None:intergenic
AGGTAATAAAAGAGCAAGAA+AGG 0.484051 3:+78180284 MsG0380016034.01.T01:CDS
AGAAGTCAACGAATTGACTT+TGG 0.484370 3:-78179663 None:intergenic
TGCATCTGTGTGTGGAAGAT+TGG 0.484672 3:+78181247 MsG0380016034.01.T01:CDS
GCATCTGGGTATGAAATAGT+TGG 0.487374 3:+78180151 MsG0380016034.01.T01:CDS
TATAAGATGGCCATCACGTT+GGG 0.488184 3:+78180345 MsG0380016034.01.T01:CDS
TAGTGAATAGCCAAGGTAAA+GGG 0.490117 3:-78181385 None:intergenic
TCCTCTCTAGCATCTGGCTC+GGG 0.490647 3:+78181136 MsG0380016034.01.T01:CDS
CCTTGGCTATTCACTACTCA+TGG 0.491058 3:+78181392 MsG0380016034.01.T01:CDS
TGTGTGTAATGGTTGGAGAC+GGG 0.491212 3:+78180605 MsG0380016034.01.T01:CDS
ATCCTCTCTAGCATCTGGCT+CGG 0.491242 3:+78181135 MsG0380016034.01.T01:CDS
TTTGTTCATTCGAAATCGAT+AGG 0.492889 3:-78179807 None:intergenic
AAGGGATTTGACAAGGTATG+AGG 0.493914 3:+78180483 MsG0380016034.01.T01:CDS
GTCCTTACAGGATATTCGAT+TGG 0.494621 3:-78181006 None:intergenic
GTGTGGAAGATTGGCGGTGG+TGG 0.497212 3:+78181256 MsG0380016034.01.T01:CDS
TGAAATTATTGGGACTGGGG+AGG 0.497512 3:+78180090 MsG0380016034.01.T01:CDS
GGTTGAAATTATTGGGACTG+GGG 0.497808 3:+78180087 MsG0380016034.01.T01:CDS
TTCTGAAGCTGACAAGAAGA+AGG 0.499270 3:+78180129 MsG0380016034.01.T01:CDS
CAACAGGGTACCCCGTCCAC+TGG 0.500159 3:-78179979 None:intergenic
GGATGCTTATTTGAAGATGG+AGG 0.500264 3:+78180366 MsG0380016034.01.T01:CDS
GGGTTGAAATTATTGGGACT+GGG 0.507117 3:+78180086 MsG0380016034.01.T01:CDS
GCAATAGAAGAACAACCAAC+AGG 0.507266 3:-78181182 None:intergenic
TTTCTTAAGAACTGTAAGAA+GGG 0.508155 3:+78180465 MsG0380016034.01.T01:CDS
GTTCAAATTCTTGGAATGGC+AGG 0.510355 3:+78180628 MsG0380016034.01.T01:CDS
GAGCAAAGACAGTGAAAGAA+AGG 0.510518 3:-78179571 None:intergenic
TGAAGTAACTAAAGGAAAGC+TGG 0.510943 3:+78173733 MsG0380016034.01.T01:CDS
ATGTTGTCAACTGGCACCAT+TGG 0.511324 3:+78181426 MsG0380016034.01.T01:CDS
ATCATTAAGGGAACATCAGA+AGG 0.511415 3:+78180781 MsG0380016034.01.T01:CDS
CCAAGAACAAGAAGCCAAGA+TGG 0.513319 3:-78181066 None:intergenic
CTTATCCTTGGAATTGCCGC+TGG 0.514128 3:+78180733 MsG0380016034.01.T01:CDS
GTCTTTGCTCAAGTTAGCAA+TGG 0.514731 3:+78179584 MsG0380016034.01.T01:CDS
GAATAAAATTGAGTACTGTA+AGG 0.517477 3:-78180861 None:intergenic
GCACAAAGTAGAATGACATA+AGG 0.518077 3:-78181452 None:intergenic
TGGAGCATTGCATGACAAGT+TGG 0.522384 3:+78173759 MsG0380016034.01.T01:CDS
CCCTGTTAGTAGCATCCCTC+GGG 0.523132 3:-78180695 None:intergenic
CTATGGAACAGCAACAGTAC+TGG 0.529386 3:+78180883 MsG0380016034.01.T01:CDS
TTCGACCTGCAGAGTTTGAG+TGG 0.530410 3:+78181348 MsG0380016034.01.T01:CDS
CTCAATCCTAAATTCACTGA+TGG 0.530524 3:+78180408 MsG0380016034.01.T01:CDS
AGATTGGCGGTGGTGGTGGA+AGG 0.531351 3:+78181263 MsG0380016034.01.T01:CDS
GTACCTCTGACCCTCATTGG+AGG 0.532540 3:+78180961 MsG0380016034.01.T01:CDS
TAATCTGCACCGCCATCAGA+TGG 0.534039 3:-78180010 None:intergenic
TGTTGTTTGTGCTGAGGTGT+CGG 0.534219 3:+78181209 MsG0380016034.01.T01:CDS
GGGGTTAAAATCCAGTGGAC+GGG 0.535568 3:+78179968 MsG0380016034.01.T01:CDS
CGGGGTTCAAATTCTTGGAA+TGG 0.536375 3:+78180624 MsG0380016034.01.T01:CDS
CATAGCCAGCGGCAATTCCA+AGG 0.540041 3:-78180738 None:intergenic
TTCATGAATATGAAGGGAGA+GGG 0.541151 3:+78180065 MsG0380016034.01.T01:CDS
ATCCTCATAAGTATAATACT+TGG 0.541456 3:-78181910 None:intergenic
CTGTGTGTAATGGTTGGAGA+CGG 0.541875 3:+78180604 MsG0380016034.01.T01:CDS
TCCCTGTTAGTAGCATCCCT+CGG 0.542313 3:-78180696 None:intergenic
TTACGTGTTTGGTTTCCTGT+TGG 0.542588 3:+78181167 MsG0380016034.01.T01:CDS
CAGGTCCACTCAAACTCTGC+AGG 0.543235 3:-78181353 None:intergenic
TTGTTCATTCGAAATCGATA+GGG 0.544996 3:-78179806 None:intergenic
GTAGTGAATAGCCAAGGTAA+AGG 0.545538 3:-78181386 None:intergenic
AGCCAATCGAATATCCTGTA+AGG 0.546100 3:+78181004 MsG0380016034.01.T01:CDS
TTGTGAAAAGTGATATAAGA+TGG 0.546784 3:+78180332 MsG0380016034.01.T01:CDS
CTCAAAGCTTCTGTGTGTAA+TGG 0.553249 3:+78180594 MsG0380016034.01.T01:CDS
GAACATAGTCATTCAAGGAC+TGG 0.558299 3:+78181685 MsG0380016034.01.T01:three_prime_UTR
TATTCACTTGATACAGATCA+CGG 0.560917 3:-78179901 None:intergenic
GAGAAAACCTTTCATCTACT+GGG 0.566816 3:+78179544 MsG0380016034.01.T01:CDS
TAAAGAAAAGCTCAATGAAG+AGG 0.568680 3:-78181113 None:intergenic
TCATCAGTGAAGATAGATTG+AGG 0.570726 3:+78181486 MsG0380016034.01.T01:CDS
CAGTGGACGGGGTACCCTGT+TGG 0.570793 3:+78179980 MsG0380016034.01.T01:CDS
ATCTGTGTGTGGAAGATTGG+CGG 0.572181 3:+78181250 MsG0380016034.01.T01:CDS
TAAATATGACCCCGAAGCCA+TGG 0.573243 3:+78180198 MsG0380016034.01.T01:CDS
GGGTTAAAATCCAGTGGACG+GGG 0.573645 3:+78179969 MsG0380016034.01.T01:CDS
AGGGAGGCTGTAGTAACTGA+AGG 0.574852 3:-78179702 None:intergenic
GATGCTTATTTGAAGATGGA+GGG 0.575425 3:+78180367 MsG0380016034.01.T01:CDS
TCATAACTGGCAAGTTGTCA+AGG 0.575645 3:-78179928 None:intergenic
AGGATAATGAAAGCAATGCC+AGG 0.576215 3:-78180841 None:intergenic
GTTGGGTACACTCCATCTGA+TGG 0.577581 3:+78179998 MsG0380016034.01.T01:CDS
AAGCTTCTGTGTGTAATGGT+TGG 0.583367 3:+78180598 MsG0380016034.01.T01:CDS
CCAAGCATCTTATAGAACAT+AGG 0.583782 3:+78173669 MsG0380016034.01.T01:CDS
AGGAAAACCCAGTAGATGAA+AGG 0.584239 3:-78179551 None:intergenic
GTTCATGAATATGAAGGGAG+AGG 0.585093 3:+78180064 MsG0380016034.01.T01:CDS
GCTGATTGTTGTTTGTGCTG+AGG 0.586499 3:+78181203 MsG0380016034.01.T01:CDS
GAAGAACAGCTCAAAATACA+AGG 0.586522 3:-78180920 None:intergenic
TAAGGACCAATCAGATTCCA+CGG 0.587012 3:+78181022 MsG0380016034.01.T01:CDS
TTCATGTCTCCAGCATCCCG+AGG 0.587384 3:+78180679 MsG0380016034.01.T01:CDS
CTGACAAGAAGAAGGCATCT+GGG 0.588634 3:+78180137 MsG0380016034.01.T01:CDS
TCAATGAAGAGGGTTCCAAA+TGG 0.589689 3:-78181102 None:intergenic
GGGTCATATTTAATACTACA+GGG 0.590568 3:-78180187 None:intergenic
AGGTAAAGGGTAGCTGACAC+AGG 0.591897 3:-78181372 None:intergenic
CCCCATAAATCCTCCAATGA+GGG 0.593979 3:-78180971 None:intergenic
TCATGAATATGAAGGGAGAG+GGG 0.597633 3:+78180066 MsG0380016034.01.T01:CDS
GTAGTAACTGAAGGGAAGCT+CGG 0.600882 3:-78179693 None:intergenic
GTATTGGTTCATGAATATGA+AGG 0.603003 3:+78180058 MsG0380016034.01.T01:CDS
AAAGAAAAGCTCAATGAAGA+GGG 0.607329 3:-78181112 None:intergenic
CCCTCATTGGAGGATTTATG+GGG 0.607901 3:+78180971 MsG0380016034.01.T01:CDS
TTCCTTGCAGGAATTTCCCG+TGG 0.608046 3:-78181039 None:intergenic
GTACTGAAATACAGAACCAA+AGG 0.608914 3:-78180942 None:intergenic
TCTCTAGCATCTGGCTCGGG+AGG 0.609934 3:+78181139 MsG0380016034.01.T01:CDS
TGGGGTTAAAATCCAGTGGA+CGG 0.610341 3:+78179967 MsG0380016034.01.T01:CDS
TCCCGAGCCAGATGCTAGAG+AGG 0.610387 3:-78181137 None:intergenic
GTGTCAGCTACCCTTTACCT+TGG 0.610703 3:+78181375 MsG0380016034.01.T01:CDS
CTGTAAGAAGGGATTTGACA+AGG 0.612349 3:+78180476 MsG0380016034.01.T01:CDS
GTGTGTAATGGTTGGAGACG+GGG 0.614178 3:+78180606 MsG0380016034.01.T01:CDS
TCCCCATAAATCCTCCAATG+AGG 0.615687 3:-78180972 None:intergenic
AATCCTCCAATGAGGGTCAG+AGG 0.617132 3:-78180964 None:intergenic
CTGTTCGTTCAAGGATAGGG+AGG 0.617238 3:+78181883 MsG0380016034.01.T01:three_prime_UTR
TATTGGTTCATGAATATGAA+GGG 0.618173 3:+78180059 MsG0380016034.01.T01:CDS
AAATAAGCATCCCAACGTGA+TGG 0.622457 3:-78180355 None:intergenic
CCCGAGGGATGCTACTAACA+GGG 0.622538 3:+78180695 MsG0380016034.01.T01:CDS
TGTGCTTTGCCATGGCTTCG+GGG 0.622977 3:-78180207 None:intergenic
ATTCACTTGATACAGATCAC+GGG 0.626162 3:-78179900 None:intergenic
GGCACAAGCTCAGATGAATG+AGG 0.628959 3:+78180519 MsG0380016034.01.T01:CDS
CACATATATGCATCTGTGTG+TGG 0.631048 3:+78181239 MsG0380016034.01.T01:CDS
AAGGACCAATCAGATTCCAC+GGG 0.631430 3:+78181023 MsG0380016034.01.T01:CDS
TACATGCACACTTATTCCAA+TGG 0.633190 3:+78179626 MsG0380016034.01.T01:CDS
ATATAAGATGGCCATCACGT+TGG 0.633554 3:+78180344 MsG0380016034.01.T01:CDS
GAATGACATAAGGAAGCCAA+TGG 0.637433 3:-78181442 None:intergenic
CCATGAGTAGTGAATAGCCA+AGG 0.640614 3:-78181392 None:intergenic
TCATGTCTCCAGCATCCCGA+GGG 0.640943 3:+78180680 MsG0380016034.01.T01:CDS
GGGAGGCTGTAGTAACTGAA+GGG 0.648548 3:-78179701 None:intergenic
ATGTCAGCGTACGTCTATGG+AGG 0.648969 3:+78180758 MsG0380016034.01.T01:CDS
AAAATGGGGTTAAAATCCAG+TGG 0.649775 3:+78179963 MsG0380016034.01.T01:CDS
CAGATGGAGTGTACCCAACA+GGG 0.651089 3:-78179994 None:intergenic
TTAAGGGAACATCAGAAGGG+TGG 0.652161 3:+78180785 MsG0380016034.01.T01:CDS
GTATGAGGAATTGGACAAAG+AGG 0.653076 3:+78180498 MsG0380016034.01.T01:CDS
GATTGCATTGCATAATAGTG+TGG 0.653823 3:+78181586 MsG0380016034.01.T01:three_prime_UTR
CCAATACAGTGAATTTCAGG+TGG 0.655418 3:-78180042 None:intergenic
TGTTTGTGCTGAGGTGTCGG+TGG 0.668306 3:+78181212 MsG0380016034.01.T01:CDS
TTCCACGGGAAATTCCTGCA+AGG 0.670161 3:+78181037 MsG0380016034.01.T01:CDS
TGTGTGTGGAAGATTGGCGG+TGG 0.674378 3:+78181253 MsG0380016034.01.T01:CDS
GAGGTATACTAGCCAAAATG+GGG 0.675306 3:+78179949 MsG0380016034.01.T01:CDS
TCATTAAGGGAACATCAGAA+GGG 0.686387 3:+78180782 MsG0380016034.01.T01:CDS
AGCGCCATTAAATGAGCACG+AGG 0.710115 3:+78179856 MsG0380016034.01.T01:CDS
GGTCATATTTAATACTACAG+GGG 0.713495 3:-78180186 None:intergenic
TGAATGAGGAGCTTTCTGGG+TGG 0.723843 3:+78180533 MsG0380016034.01.T01:CDS
GGGTACACTCCATCTGATGG+CGG 0.729444 3:+78180001 MsG0380016034.01.T01:CDS
ACGTACGCTGACATAGCCAG+CGG 0.774400 3:-78180749 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACACATAATATAAATTTA+TGG + Chr3:78174879-78174898 MsG0380016034.01.T01:intron 10.0%
!! AATTAAAGTAAAACAAAAAT+TGG - Chr3:78177892-78177911 None:intergenic 10.0%
!! ATAATGACAAATTATTAAAA+TGG + Chr3:78176828-78176847 MsG0380016034.01.T01:intron 10.0%
!! ATATATTATCAAAATTAAAG+TGG - Chr3:78178795-78178814 None:intergenic 10.0%
!! TTAAAAACACATAATATAAA+TGG + Chr3:78174875-78174894 MsG0380016034.01.T01:intron 10.0%
!!! ATCTTTTAATGAAATTTTAT+GGG + Chr3:78177255-78177274 MsG0380016034.01.T01:intron 10.0%
!!! TATCTTTTAATGAAATTTTA+TGG + Chr3:78177254-78177273 MsG0380016034.01.T01:intron 10.0%
!! AAAAAAAGTTAAAAAATGAG+TGG + Chr3:78176027-78176046 MsG0380016034.01.T01:intron 15.0%
!! AGAAATGAAAATTATGATAA+AGG + Chr3:78178124-78178143 MsG0380016034.01.T01:intron 15.0%
!! ATATATAGAAAATTGTTAGA+TGG + Chr3:78181798-78181817 MsG0380016034.01.T01:three_prime_UTR 15.0%
!! ATTATTATTATGGGAATTAT+GGG - Chr3:78175024-78175043 None:intergenic 15.0%
!! GAAAAAATAAATTAAACACT+AGG - Chr3:78177964-78177983 None:intergenic 15.0%
!! TAGTTATGATTTATGATTAA+TGG + Chr3:78178010-78178029 MsG0380016034.01.T01:intron 15.0%
!! TATAATCTAAATGTATTTGA+TGG + Chr3:78174759-78174778 MsG0380016034.01.T01:intron 15.0%
!! TATTATTATTATGGGAATTA+TGG - Chr3:78175025-78175044 None:intergenic 15.0%
!!! AAAATTATGATAAAGGTTTT+TGG + Chr3:78178131-78178150 MsG0380016034.01.T01:intron 15.0%
!!! AATAATTTGTCATTATAACA+CGG - Chr3:78176824-78176843 None:intergenic 15.0%
!!! CTAATAAATGTCTTTTAAAA+GGG + Chr3:78176161-78176180 MsG0380016034.01.T01:intron 15.0%
!!! GTTGCTATTATTATTATTAT+GGG - Chr3:78175033-78175052 None:intergenic 15.0%
!!! TACTTCATGTTTTTTTTTTA+AGG - Chr3:78176076-78176095 None:intergenic 15.0%
!!! TCTTTTGTATTATGAATTAT+TGG - Chr3:78174930-78174949 None:intergenic 15.0%
!! AAAATTTCTATGAAGTAAGA+AGG + Chr3:78174197-78174216 MsG0380016034.01.T01:intron 20.0%
!! AAAATTTCTATGAAGTATGA+AGG + Chr3:78176528-78176547 MsG0380016034.01.T01:intron 20.0%
!! AATATATTATAGACAGAAGA+AGG + Chr3:78176931-78176950 MsG0380016034.01.T01:intron 20.0%
!! AATTAAACCCAATAATTAGT+GGG + Chr3:78175054-78175073 MsG0380016034.01.T01:intron 20.0%
!! ACGAATAAATTAGTAACAAA+CGG + Chr3:78177028-78177047 MsG0380016034.01.T01:intron 20.0%
!! ACGAATAAATTAGTATCAAA+CGG + Chr3:78175077-78175096 MsG0380016034.01.T01:intron 20.0%
!! ATATTGTTTAAAAACTGCTA+TGG + Chr3:78179395-78179414 MsG0380016034.01.T01:intron 20.0%
!! ATGAATTATTGGTAAGAAAA+AGG - Chr3:78176911-78176930 None:intergenic 20.0%
!! ATGGAAAAAAAATACAAACA+AGG + Chr3:78174438-78174457 MsG0380016034.01.T01:intron 20.0%
!! ATTAAAAAAAAAGTAGGATG+AGG - Chr3:78174366-78174385 None:intergenic 20.0%
!! ATTCAATCTCCATTATTAAT+CGG - Chr3:78175347-78175366 None:intergenic 20.0%
!! CAACAGTATATATATTTCAA+GGG + Chr3:78179342-78179361 MsG0380016034.01.T01:intron 20.0%
!! GAAATTAGTTCCTAAAAATA+CGG - Chr3:78178998-78179017 None:intergenic 20.0%
!! GACTGAAATAATATACAATA+AGG + Chr3:78179298-78179317 MsG0380016034.01.T01:intron 20.0%
!! TAGTTTATCTAAGTTTCTTT+AGG + Chr3:78181737-78181756 MsG0380016034.01.T01:three_prime_UTR 20.0%
!! TATAGAATATAGGGTATAAA+TGG + Chr3:78175543-78175562 MsG0380016034.01.T01:intron 20.0%
!! TGGAAAAAAAATACAAACAA+GGG + Chr3:78174439-78174458 MsG0380016034.01.T01:intron 20.0%
!! TGTCATTATAATGAAAAAAC+TGG - Chr3:78174817-78174836 None:intergenic 20.0%
!!! AAGAGATAACTTTTAAGTTT+AGG + Chr3:78173898-78173917 MsG0380016034.01.T01:intron 20.0%
!!! AATTGATTGATCTTTTACAT+GGG - Chr3:78181533-78181552 None:intergenic 20.0%
!!! ACACTTGTTAAAAATATAGT+AGG + Chr3:78178599-78178618 MsG0380016034.01.T01:intron 20.0%
!!! ACTTCATAGAAATTTTGTAA+GGG - Chr3:78176524-78176543 None:intergenic 20.0%
!!! ACTTCATAGAAATTTTTAGA+GGG - Chr3:78174193-78174212 None:intergenic 20.0%
!!! AGAGATAACTTTTAAGTTTA+GGG + Chr3:78173899-78173918 MsG0380016034.01.T01:intron 20.0%
!!! AGTACATTTTCTAAATTAGA+CGG + Chr3:78177223-78177242 MsG0380016034.01.T01:intron 20.0%
!!! ATAATTTTCCCGATTAATAA+TGG + Chr3:78175335-78175354 MsG0380016034.01.T01:intron 20.0%
!!! ATATTTCTGTTAACTGTTTA+CGG - Chr3:78173973-78173992 None:intergenic 20.0%
!!! ATCAATTTTATAATGCAATG+CGG + Chr3:78181646-78181665 MsG0380016034.01.T01:three_prime_UTR 20.0%
!!! ATCATTTTATATCTTATCCT+TGG + Chr3:78180721-78180740 MsG0380016034.01.T01:CDS 20.0%
!!! ATTGGTTGCTATTATTATTA+CGG - Chr3:78175037-78175056 None:intergenic 20.0%
!!! CATCCTACTTTTTTTTTAAT+CGG + Chr3:78174366-78174385 MsG0380016034.01.T01:intron 20.0%
!!! CCTAATAAATGTCTTTTAAA+AGG + Chr3:78176160-78176179 MsG0380016034.01.T01:intron 20.0%
!!! CCTTTTAAAAGACATTTATT+AGG - Chr3:78176163-78176182 None:intergenic 20.0%
!!! GGTTGCTATTATTATTATTA+TGG - Chr3:78175034-78175053 None:intergenic 20.0%
!!! TACTTCATAGAAATTTTGTA+AGG - Chr3:78176525-78176544 None:intergenic 20.0%
!!! TACTTCATAGAAATTTTTAG+AGG - Chr3:78174194-78174213 None:intergenic 20.0%
!!! TCATGCACTAATTTTTTTAA+GGG - Chr3:78175992-78176011 None:intergenic 20.0%
!!! TTCATGCACTAATTTTTTTA+AGG - Chr3:78175993-78176012 None:intergenic 20.0%
!!! TTTTAATGAAATTTTATGGG+AGG + Chr3:78177258-78177277 MsG0380016034.01.T01:intron 20.0%
! AAATACAAACAAGGGAAAAT+CGG + Chr3:78174447-78174466 MsG0380016034.01.T01:intron 25.0%
! AAGATGCTTGGTTAAATTAA+TGG - Chr3:78173660-78173679 None:intergenic 25.0%
! AATGAATTGAAATGGATAGA+AGG - Chr3:78175806-78175825 None:intergenic 25.0%
! ACTTATTAATGCTTCTTGTA+CGG - Chr3:78174414-78174433 None:intergenic 25.0%
! AGAAGACGACAAATATTATA+CGG + Chr3:78178695-78178714 MsG0380016034.01.T01:intron 25.0%
! ATAAAATGATCAACTAAAGC+TGG - Chr3:78174725-78174744 None:intergenic 25.0%
! ATACAGGATGTATAGAATAT+AGG + Chr3:78177463-78177482 MsG0380016034.01.T01:intron 25.0%
! ATATACAATAAGGAACTTTG+TGG + Chr3:78179308-78179327 MsG0380016034.01.T01:intron 25.0%
! ATCCTCATAAGTATAATACT+TGG - Chr3:78181913-78181932 None:intergenic 25.0%
! ATGTTTGTTCATTATGTTTG+TGG + Chr3:78181840-78181859 MsG0380016034.01.T01:three_prime_UTR 25.0%
! ATTAACGTTATGCAATTTCA+GGG + Chr3:78174012-78174031 MsG0380016034.01.T01:intron 25.0%
! ATTATACGGTTATGTTTATG+TGG + Chr3:78178709-78178728 MsG0380016034.01.T01:intron 25.0%
! CAATTAAACCCAATAATTAG+TGG + Chr3:78175053-78175072 MsG0380016034.01.T01:intron 25.0%
! CACTAATTATTGGGTTTAAT+TGG - Chr3:78175055-78175074 None:intergenic 25.0%
! CCAACAGTATATATATTTCA+AGG + Chr3:78179341-78179360 MsG0380016034.01.T01:intron 25.0%
! CCTTGAAATATATATACTGT+TGG - Chr3:78179344-78179363 None:intergenic 25.0%
! CGAATAAATTAGTAACAAAC+GGG + Chr3:78177029-78177048 MsG0380016034.01.T01:intron 25.0%
! CGAATAAATTAGTATCAAAC+GGG + Chr3:78175078-78175097 MsG0380016034.01.T01:intron 25.0%
! GCATTGCATTATAAAATTGA+TGG - Chr3:78181647-78181666 None:intergenic 25.0%
! GTTCAATCTCCATTATTAAT+CGG - Chr3:78177298-78177317 None:intergenic 25.0%
! TAAAATGTAGTAAAGTAGAG+CGG - Chr3:78178749-78178768 None:intergenic 25.0%
! TAATAACCATCAGTGAATTT+AGG - Chr3:78180417-78180436 None:intergenic 25.0%
! TACAGGATGTATAGAATATA+GGG + Chr3:78175534-78175553 MsG0380016034.01.T01:intron 25.0%
! TGTTAAAAATATAGTAGGAG+TGG + Chr3:78178604-78178623 MsG0380016034.01.T01:intron 25.0%
! TGTTTGTTCATTATGTTTGT+GGG + Chr3:78181841-78181860 MsG0380016034.01.T01:three_prime_UTR 25.0%
! TTAACAGAAATATTGACAGA+GGG + Chr3:78173980-78173999 MsG0380016034.01.T01:intron 25.0%
! TTAGATTATAAAAGCCAAAC+TGG - Chr3:78176766-78176785 None:intergenic 25.0%
! TTATACGGTTATGTTTATGT+GGG + Chr3:78178710-78178729 MsG0380016034.01.T01:intron 25.0%
! TTCAATCTCCATTATTAATC+GGG - Chr3:78175346-78175365 None:intergenic 25.0%
! TTGTGAAAAGTGATATAAGA+TGG + Chr3:78180332-78180351 MsG0380016034.01.T01:CDS 25.0%
! TTTCTTAAGAACTGTAAGAA+GGG + Chr3:78180465-78180484 MsG0380016034.01.T01:CDS 25.0%
!! AATGATGATTTTGTAGCTTT+GGG - Chr3:78175740-78175759 None:intergenic 25.0%
!! AATTACAAAACCTCTTTTCT+TGG + Chr3:78175614-78175633 MsG0380016034.01.T01:intron 25.0%
!! AATTGATGGATGATTGTTTA+AGG - Chr3:78181633-78181652 None:intergenic 25.0%
!! AATTTCCCTGAATGAAATTT+TGG + Chr3:78179232-78179251 MsG0380016034.01.T01:intron 25.0%
!! AGGGTATAAATGGAATTTTA+GGG + Chr3:78175553-78175572 MsG0380016034.01.T01:intron 25.0%
!! AGGTTGTTTCATTTGTTTAT+GGG - Chr3:78174517-78174536 None:intergenic 25.0%
!! AGTGCATTTTCTAAATTAGA+CGG + Chr3:78175272-78175291 MsG0380016034.01.T01:intron 25.0%
!! ATATCTGAATCTTGTTTATG+TGG - Chr3:78175441-78175460 None:intergenic 25.0%
!! ATTACAAAACCTCTTTTCTT+GGG + Chr3:78175615-78175634 MsG0380016034.01.T01:intron 25.0%
!! ATTGTCAACTTTTACTCTTA+TGG + Chr3:78179057-78179076 MsG0380016034.01.T01:intron 25.0%
!! CAATTGATTGATCTTTTACA+TGG - Chr3:78181534-78181553 None:intergenic 25.0%
!! CAGTACTCAATTTTATTCTA+TGG + Chr3:78180866-78180885 MsG0380016034.01.T01:CDS 25.0%
!! CGTCTTTTAATGAAACTTTA+GGG + Chr3:78175303-78175322 MsG0380016034.01.T01:intron 25.0%
!! GAATAAAATTGAGTACTGTA+AGG - Chr3:78180864-78180883 None:intergenic 25.0%
!! GTACATTTTCTAAATTAGAC+GGG + Chr3:78177224-78177243 MsG0380016034.01.T01:intron 25.0%
!! GTCTTTTAATGAAACTTTAG+GGG + Chr3:78175304-78175323 MsG0380016034.01.T01:intron 25.0%
!! GTTTTTGAATGTGCATTTAA+TGG + Chr3:78178159-78178178 MsG0380016034.01.T01:intron 25.0%
!! TAAATGTATTTGATGGTTTC+TGG + Chr3:78174766-78174785 MsG0380016034.01.T01:intron 25.0%
!! TACATTTTCTAAATTAGACG+GGG + Chr3:78177225-78177244 MsG0380016034.01.T01:intron 25.0%
!! TAGGGTATAAATGGAATTTT+AGG + Chr3:78175552-78175571 MsG0380016034.01.T01:intron 25.0%
!! TAGTTTTCAAATGTTTGTCA+TGG - Chr3:78173790-78173809 None:intergenic 25.0%
!! TGTTTATGGGTGATTTTTAA+GGG - Chr3:78174504-78174523 None:intergenic 25.0%
!! TTAGACTTTTTATGACAAGT+TGG - Chr3:78176333-78176352 None:intergenic 25.0%
!! TTGCCGATTAAAAAAAAAGT+AGG - Chr3:78174372-78174391 None:intergenic 25.0%
!! TTGTTTATGGGTGATTTTTA+AGG - Chr3:78174505-78174524 None:intergenic 25.0%
!! TTTTCTTAAGAACTGTAAGA+AGG + Chr3:78180464-78180483 MsG0380016034.01.T01:CDS 25.0%
!!! AAGACACGTTTTATTATAGT+TGG + Chr3:78174161-78174180 MsG0380016034.01.T01:intron 25.0%
!!! ACAAGAAGCATTAATAAGTT+CGG + Chr3:78174415-78174434 MsG0380016034.01.T01:intron 25.0%
!!! AGACACGTTTTATTATAGTT+GGG + Chr3:78174162-78174181 MsG0380016034.01.T01:intron 25.0%
!!! AGATAACTTTTAAGTTTAGG+GGG + Chr3:78173901-78173920 MsG0380016034.01.T01:intron 25.0%
!!! CACTAATTTTTTTAAGGGAA+AGG - Chr3:78175987-78176006 None:intergenic 25.0%
!!! CTTCATAGAAATTTTTAGAG+GGG - Chr3:78174192-78174211 None:intergenic 25.0%
!!! GAGATAACTTTTAAGTTTAG+GGG + Chr3:78173900-78173919 MsG0380016034.01.T01:intron 25.0%
!!! GCTCTAACAAATTTTAAGTT+TGG + Chr3:78176129-78176148 MsG0380016034.01.T01:intron 25.0%
!!! TATTGGTTCATGAATATGAA+GGG + Chr3:78180059-78180078 MsG0380016034.01.T01:CDS 25.0%
!!! TCATGTTTTTTTTTTAAGGC+AGG - Chr3:78176072-78176091 None:intergenic 25.0%
!!! TCGGTTTTAATGACAATATA+TGG - Chr3:78178252-78178271 None:intergenic 25.0%
!!! TTCATAGAAATTTTTAGAGG+GGG - Chr3:78174191-78174210 None:intergenic 25.0%
!!! TTCCAATTTTCAAGATAAGT+AGG + Chr3:78175182-78175201 MsG0380016034.01.T01:intron 25.0%
AAAACGTGTCTTCTAAGTTA+GGG - Chr3:78174153-78174172 None:intergenic 30.0%
AAAGAAAAGCTCAATGAAGA+GGG - Chr3:78181115-78181134 None:intergenic 30.0%
AAATGAGCTTGACAAATATC+AGG + Chr3:78180264-78180283 MsG0380016034.01.T01:CDS 30.0%
AATCTTGGAGAACTTCTTAT+GGG + Chr3:78179764-78179783 MsG0380016034.01.T01:CDS 30.0%
ACACTAGGTAAACCAAATTA+CGG - Chr3:78177949-78177968 None:intergenic 30.0%
ACGTTTCATATTTATGGGTT+TGG + Chr3:78177085-78177104 MsG0380016034.01.T01:intron 30.0%
ACTAGTTAAATTGCAAGACT+CGG - Chr3:78178888-78178907 None:intergenic 30.0%
AGCTAAGGTTGTTAACTTTA+TGG - Chr3:78175240-78175259 None:intergenic 30.0%
AGCTCAAAATACAAGGAAAT+AGG - Chr3:78180916-78180935 None:intergenic 30.0%
AGGATACTATACTTCGTAAA+TGG - Chr3:78178934-78178953 None:intergenic 30.0%
AGGTAATAAAAGAGCAAGAA+AGG + Chr3:78180284-78180303 MsG0380016034.01.T01:CDS 30.0%
ATCAAAATTAAAGTGGCCAA+GGG - Chr3:78178788-78178807 None:intergenic 30.0%
ATCAAGCTACAAAAAGAACT+CGG - Chr3:78181569-78181588 None:intergenic 30.0%
ATGCAGAAGGAAAAAAAGAT+AGG + Chr3:78178569-78178588 MsG0380016034.01.T01:intron 30.0%
ATGCGACGTTTCATATTTAT+GGG + Chr3:78175129-78175148 MsG0380016034.01.T01:intron 30.0%
ATTTCGAGAAAATATTCCCT+TGG + Chr3:78178769-78178788 MsG0380016034.01.T01:intron 30.0%
CAAGACAAGATGATGTAATA+TGG - Chr3:78174312-78174331 None:intergenic 30.0%
CAATGTTATATCACTTTGCA+TGG - Chr3:78176564-78176583 None:intergenic 30.0%
CAGTGATTTCAAATCTACAT+AGG - Chr3:78179444-78179463 None:intergenic 30.0%
CTCCTACTTATCTTGAAAAT+TGG - Chr3:78175187-78175206 None:intergenic 30.0%
CTTAGAGATGAAGTAACTAA+AGG + Chr3:78173725-78173744 MsG0380016034.01.T01:CDS 30.0%
CTTATTAATGCTTCTTGTAC+GGG - Chr3:78174413-78174432 None:intergenic 30.0%
GAAAATACGAACATTCATTG+TGG + Chr3:78178430-78178449 MsG0380016034.01.T01:intron 30.0%
GACCAAGTATTATACTTATG+AGG + Chr3:78181908-78181927 MsG0380016034.01.T01:three_prime_UTR 30.0%
GATATTTGTCAAGCTCATTT+GGG - Chr3:78180264-78180283 None:intergenic 30.0%
GATTAACGTTATGCAATTTC+AGG + Chr3:78174011-78174030 MsG0380016034.01.T01:intron 30.0%
GGAATTATGGGATAACAAAT+CGG - Chr3:78175012-78175031 None:intergenic 30.0%
GGATACTATACTTCGTAAAT+GGG - Chr3:78178933-78178952 None:intergenic 30.0%
GGCATTAATATATTCTCCAT+TGG - Chr3:78179645-78179664 None:intergenic 30.0%
GGGTCATATTTAATACTACA+GGG - Chr3:78180190-78180209 None:intergenic 30.0%
GGTCATATTTAATACTACAG+GGG - Chr3:78180189-78180208 None:intergenic 30.0%
GTACAGGATGTATAGAATAT+AGG + Chr3:78175533-78175552 MsG0380016034.01.T01:intron 30.0%
GTATCCTAACAAAAAGTAGA+CGG + Chr3:78178947-78178966 MsG0380016034.01.T01:intron 30.0%
GTGATTAATACACCGTAATT+TGG + Chr3:78177934-78177953 MsG0380016034.01.T01:intron 30.0%
GTGGAAACAAACATGAATTA+AGG + Chr3:78173828-78173847 MsG0380016034.01.T01:CDS 30.0%
GTTAACAGAAATATTGACAG+AGG + Chr3:78173979-78173998 MsG0380016034.01.T01:intron 30.0%
TAAAACGTGTCTTCTAAGTT+AGG - Chr3:78174154-78174173 None:intergenic 30.0%
TAAAAGACATTTATTAGGCG+TGG - Chr3:78176158-78176177 None:intergenic 30.0%
TAAAGAAAAGCTCAATGAAG+AGG - Chr3:78181116-78181135 None:intergenic 30.0%
TAACAGAAATATTGACAGAG+GGG + Chr3:78173981-78174000 MsG0380016034.01.T01:intron 30.0%
TAAGCTTAGATTCAGTTGTT+AGG + Chr3:78178219-78178238 MsG0380016034.01.T01:intron 30.0%
TATCAAAATTAAAGTGGCCA+AGG - Chr3:78178789-78178808 None:intergenic 30.0%
TATGCGACGTTTCATATTTA+TGG + Chr3:78175128-78175147 MsG0380016034.01.T01:intron 30.0%
TATTCACTTGATACAGATCA+CGG - Chr3:78179904-78179923 None:intergenic 30.0%
TATTCGTCCCACTAATTATT+GGG - Chr3:78175064-78175083 None:intergenic 30.0%
TCAAAGTTCGAAAAAGTCAT+TGG - Chr3:78176375-78176394 None:intergenic 30.0%
TCTCATACTTAATACTTGTG+AGG - Chr3:78175369-78175388 None:intergenic 30.0%
TGACGAAACTTACAATTTCA+GGG + Chr3:78174071-78174090 MsG0380016034.01.T01:intron 30.0%
TGATATTTGTCAAGCTCATT+TGG - Chr3:78180265-78180284 None:intergenic 30.0%
TGCAGAAGGAAAAAAAGATA+GGG + Chr3:78178570-78178589 MsG0380016034.01.T01:intron 30.0%
TGTTGTAGGTGATGTATTTA+GGG + Chr3:78180561-78180580 MsG0380016034.01.T01:CDS 30.0%
TTAACGTTATGCAATTTCAG+GGG + Chr3:78174013-78174032 MsG0380016034.01.T01:intron 30.0%
TTATATCTTCTGTTCGTTCA+AGG + Chr3:78181874-78181893 MsG0380016034.01.T01:three_prime_UTR 30.0%
TTATTCGTCCCACTAATTAT+TGG - Chr3:78175065-78175084 None:intergenic 30.0%
TTCAGATATCTTTCCACATA+CGG + Chr3:78175452-78175471 MsG0380016034.01.T01:intron 30.0%
TTCCTAAAAATACGGATCAA+TGG - Chr3:78178990-78179009 None:intergenic 30.0%
TTGACGAAACTTACAATTTC+AGG + Chr3:78174070-78174089 MsG0380016034.01.T01:intron 30.0%
TTGTAGACTTTCAATTTCAG+AGG + Chr3:78177125-78177144 MsG0380016034.01.T01:intron 30.0%
TTGTTCATTCGAAATCGATA+GGG - Chr3:78179809-78179828 None:intergenic 30.0%
TTGTTGTAGGTGATGTATTT+AGG + Chr3:78180560-78180579 MsG0380016034.01.T01:CDS 30.0%
TTTGTTCATTCGAAATCGAT+AGG - Chr3:78179810-78179829 None:intergenic 30.0%
! AGAAAGCTTTAATGAGAACA+TGG + Chr3:78176296-78176315 MsG0380016034.01.T01:intron 30.0%
! ATATAAAGTTCGCTTTGTTC+CGG - Chr3:78175488-78175507 None:intergenic 30.0%
! ATGGTTATTATTTTCCTAGC+TGG + Chr3:78180427-78180446 MsG0380016034.01.T01:CDS 30.0%
! CAGGTTGTTTCATTTGTTTA+TGG - Chr3:78174518-78174537 None:intergenic 30.0%
! CATATTGCTATTACGGATTA+CGG - Chr3:78174987-78175006 None:intergenic 30.0%
! GAATGATGATTTTGTAGCTT+TGG - Chr3:78175741-78175760 None:intergenic 30.0%
! GACTCGGTATATATTTACTT+TGG - Chr3:78178872-78178891 None:intergenic 30.0%
! GCGTCTTTTAATGAAACTTT+AGG + Chr3:78175302-78175321 MsG0380016034.01.T01:intron 30.0%
! GTGCATTTTCTAAATTAGAC+GGG + Chr3:78175273-78175292 MsG0380016034.01.T01:intron 30.0%
! TAACTCATGATTTTCACACA+TGG + Chr3:78176956-78176975 MsG0380016034.01.T01:intron 30.0%
! TAGCAATGGTTTTTATCTTC+CGG + Chr3:78179598-78179617 MsG0380016034.01.T01:CDS 30.0%
! TCATAGAAATTTTGTAAGGG+TGG - Chr3:78176521-78176540 None:intergenic 30.0%
! TCTGAAATGAGATTTGGATT+GGG - Chr3:78177601-78177620 None:intergenic 30.0%
! TGGATCTGATTTAAAACCTT+TGG + Chr3:78178030-78178049 MsG0380016034.01.T01:intron 30.0%
! TGTAGATTTGAAATCACTGT+TGG + Chr3:78179445-78179464 MsG0380016034.01.T01:intron 30.0%
! TTGATCATTTTACTCCAGTT+TGG + Chr3:78176749-78176768 MsG0380016034.01.T01:intron 30.0%
!! AGCATATTTTGTGTTATTCG+TGG - Chr3:78179211-78179230 None:intergenic 30.0%
!! GAGATTAAAAGTATTGAGAG+GGG + Chr3:78175575-78175594 MsG0380016034.01.T01:intron 30.0%
!! GCATATTTTGTGTTATTCGT+GGG - Chr3:78179210-78179229 None:intergenic 30.0%
!! GGAGATTAAAAGTATTGAGA+GGG + Chr3:78175574-78175593 MsG0380016034.01.T01:intron 30.0%
!! GTATTGGTTCATGAATATGA+AGG + Chr3:78180058-78180077 MsG0380016034.01.T01:CDS 30.0%
!! GTTTATGGGTGATTTTTAAG+GGG - Chr3:78174503-78174522 None:intergenic 30.0%
!! GTTTTGGCAATGAATTGAAA+TGG - Chr3:78175814-78175833 None:intergenic 30.0%
!! TCATAGAAATTTTTAGAGGG+GGG - Chr3:78174190-78174209 None:intergenic 30.0%
!! TTGGAATTAGCTTTGATTCA+CGG + Chr3:78179464-78179483 MsG0380016034.01.T01:CDS 30.0%
!! TTTTAATGAAACTTTAGGGG+AGG + Chr3:78175307-78175326 MsG0380016034.01.T01:intron 30.0%
!!! TGGTTTTGTTTGAAAGAAAG+TGG + Chr3:78175154-78175173 MsG0380016034.01.T01:intron 30.0%
AAAAACATGAGATCCAGCTA+CGG - Chr3:78177845-78177864 None:intergenic 35.0%
AAAATGGGGTTAAAATCCAG+TGG + Chr3:78179963-78179982 MsG0380016034.01.T01:CDS 35.0%
AAACGTGTCTTCTAAGTTAG+GGG - Chr3:78174152-78174171 None:intergenic 35.0%
AACAGAAATATTGACAGAGG+GGG + Chr3:78173982-78174001 MsG0380016034.01.T01:intron 35.0%
AACTTTATCTCACACCTTCT+AGG + Chr3:78177434-78177453 MsG0380016034.01.T01:intron 35.0%
AAGTTAACAACCTTAGCTCA+AGG + Chr3:78175242-78175261 MsG0380016034.01.T01:intron 35.0%
AATTCATTGCCAAAACCCTA+CGG + Chr3:78175818-78175837 MsG0380016034.01.T01:intron 35.0%
ACACAGCCAAAATTTCATTC+AGG - Chr3:78179241-78179260 None:intergenic 35.0%
ACATAAGTGCAAAAGTTCAG+GGG + Chr3:78173932-78173951 MsG0380016034.01.T01:intron 35.0%
ACGAAACTTACAATTTCAGG+GGG + Chr3:78174073-78174092 MsG0380016034.01.T01:intron 35.0%
ACGTTTCATATTTATGGGCT+TGG + Chr3:78175134-78175153 MsG0380016034.01.T01:intron 35.0%
AGAGAGAGAGATTTATCGTA+GGG - Chr3:78175836-78175855 None:intergenic 35.0%
AGAGAGAGATATTTACCGTA+GGG - Chr3:78177774-78177793 None:intergenic 35.0%
AGGTTGTTCTTTAACAGGTT+TGG - Chr3:78174611-78174630 None:intergenic 35.0%
AGTTAACAACCTTAGCTCAA+GGG + Chr3:78175243-78175262 MsG0380016034.01.T01:intron 35.0%
ATACTTCGTAAATGGGTCAT+TGG - Chr3:78178926-78178945 None:intergenic 35.0%
ATATATCTCTCACACCTTCT+AGG + Chr3:78175504-78175523 MsG0380016034.01.T01:intron 35.0%
ATATTTCACCCAACTTCCAA+AGG - Chr3:78174295-78174314 None:intergenic 35.0%
ATCATTAAGGGAACATCAGA+AGG + Chr3:78180781-78180800 MsG0380016034.01.T01:CDS 35.0%
ATGAGGTATACTAGCCAAAA+TGG + Chr3:78179947-78179966 MsG0380016034.01.T01:CDS 35.0%
ATTCACTTGATACAGATCAC+GGG - Chr3:78179903-78179922 None:intergenic 35.0%
ATTGCAATCATGTTGTCAAC+TGG + Chr3:78181417-78181436 MsG0380016034.01.T01:CDS 35.0%
CACAGCCAAAATTTCATTCA+GGG - Chr3:78179240-78179259 None:intergenic 35.0%
CACATAAGTGCAAAAGTTCA+GGG + Chr3:78173931-78173950 MsG0380016034.01.T01:intron 35.0%
CCAAGCATCTTATAGAACAT+AGG + Chr3:78173669-78173688 MsG0380016034.01.T01:CDS 35.0%
CCATCACAGTATAAAACCAA+AGG - Chr3:78178049-78178068 None:intergenic 35.0%
CCTATGTTCTATAAGATGCT+TGG - Chr3:78173672-78173691 None:intergenic 35.0%
CGCTACAACATTGTTCATAT+TGG + Chr3:78179171-78179190 MsG0380016034.01.T01:intron 35.0%
CGTAATCCGTAATAGCAATA+TGG + Chr3:78174985-78175004 MsG0380016034.01.T01:intron 35.0%
CTAGCAAAAAATTTACGCAG+AGG - Chr3:78175940-78175959 None:intergenic 35.0%
CTCAATCCTAAATTCACTGA+TGG + Chr3:78180408-78180427 MsG0380016034.01.T01:CDS 35.0%
CTTGTACTCCATTAACTACT+TGG + Chr3:78181323-78181342 MsG0380016034.01.T01:CDS 35.0%
GAACCAATACAGTGAATTTC+AGG - Chr3:78180048-78180067 None:intergenic 35.0%
GAAGAACAGCTCAAAATACA+AGG - Chr3:78180923-78180942 None:intergenic 35.0%
GAATCTTGGAGAACTTCTTA+TGG + Chr3:78179763-78179782 MsG0380016034.01.T01:CDS 35.0%
GACGAAACTTACAATTTCAG+GGG + Chr3:78174072-78174091 MsG0380016034.01.T01:intron 35.0%
GAGAAAACCTTTCATCTACT+GGG + Chr3:78179544-78179563 MsG0380016034.01.T01:CDS 35.0%
GATGCTTATTTGAAGATGGA+GGG + Chr3:78180367-78180386 MsG0380016034.01.T01:CDS 35.0%
GATTGCATTGCATAATAGTG+TGG + Chr3:78181586-78181605 MsG0380016034.01.T01:three_prime_UTR 35.0%
GCACAAAGTAGAATGACATA+AGG - Chr3:78181455-78181474 None:intergenic 35.0%
GGACAAATTAAACCAACCAA+TGG + Chr3:78177050-78177069 MsG0380016034.01.T01:intron 35.0%
GGGGTCATATTTAATACTAC+AGG - Chr3:78180191-78180210 None:intergenic 35.0%
GTACTGAAATACAGAACCAA+AGG - Chr3:78180945-78180964 None:intergenic 35.0%
GTCGAAAACCAAGTAGTTAA+TGG - Chr3:78181334-78181353 None:intergenic 35.0%
GTGCGACGTTTCATATTTAT+GGG + Chr3:78177080-78177099 MsG0380016034.01.T01:intron 35.0%
TAACGTTATGCAATTTCAGG+GGG + Chr3:78174014-78174033 MsG0380016034.01.T01:intron 35.0%
TACATGCACACTTATTCCAA+TGG + Chr3:78179626-78179645 MsG0380016034.01.T01:CDS 35.0%
TACTCATGTTGCTATGTTAG+AGG + Chr3:78175883-78175902 MsG0380016034.01.T01:intron 35.0%
TACTTTGGTGAAACATGACT+CGG - Chr3:78178857-78178876 None:intergenic 35.0%
TAGTGAATAGCCAAGGTAAA+GGG - Chr3:78181388-78181407 None:intergenic 35.0%
TCAGATATCTTTCCACATAC+GGG + Chr3:78175453-78175472 MsG0380016034.01.T01:intron 35.0%
TCATCAGTGAAGATAGATTG+AGG + Chr3:78181486-78181505 MsG0380016034.01.T01:CDS 35.0%
TCATTAAGGGAACATCAGAA+GGG + Chr3:78180782-78180801 MsG0380016034.01.T01:CDS 35.0%
TCCTGTATATATCTCCTAGA+AGG - Chr3:78177451-78177470 None:intergenic 35.0%
TCTCTGAACATAGTCATTCA+AGG + Chr3:78181680-78181699 MsG0380016034.01.T01:three_prime_UTR 35.0%
TGAAGTAACTAAAGGAAAGC+TGG + Chr3:78173733-78173752 MsG0380016034.01.T01:CDS 35.0%
TGAGAAAACCTTTCATCTAC+TGG + Chr3:78179543-78179562 MsG0380016034.01.T01:CDS 35.0%
TGAGGTATACTAGCCAAAAT+GGG + Chr3:78179948-78179967 MsG0380016034.01.T01:CDS 35.0%
TGATGTTTCGTTAACTACAG+AGG + Chr3:78174042-78174061 MsG0380016034.01.T01:intron 35.0%
TGTGCGACGTTTCATATTTA+TGG + Chr3:78177079-78177098 MsG0380016034.01.T01:intron 35.0%
TTCAAACAAACGGAATGCAT+CGG - Chr3:78178281-78178300 None:intergenic 35.0%
TTCATGAATATGAAGGGAGA+GGG + Chr3:78180065-78180084 MsG0380016034.01.T01:CDS 35.0%
TTGGGATGCTTATTTGAAGA+TGG + Chr3:78180363-78180382 MsG0380016034.01.T01:CDS 35.0%
TTTACCTCGTGCTCATTTAA+TGG - Chr3:78179863-78179882 None:intergenic 35.0%
TTTCAATTTCAGAGGCAAGT+AGG + Chr3:78177133-78177152 MsG0380016034.01.T01:intron 35.0%
TTTGACAAGGTATGAGGAAT+TGG + Chr3:78180489-78180508 MsG0380016034.01.T01:CDS 35.0%
! AAATGCGTTTGGTCTGAAAT+GGG - Chr3:78175682-78175701 None:intergenic 35.0%
! AAGAAGCATGATGTGATTAG+TGG + Chr3:78173809-78173828 MsG0380016034.01.T01:CDS 35.0%
! AATGAGATTTGGATTGGGTT+TGG - Chr3:78177596-78177615 None:intergenic 35.0%
! ACCTTCTAGGAGATATATAC+AGG + Chr3:78177447-78177466 MsG0380016034.01.T01:intron 35.0%
! AGAAGTCAACGAATTGACTT+TGG - Chr3:78179666-78179685 None:intergenic 35.0%
! AGAGATTTATCGTAGGGTTT+TGG - Chr3:78175830-78175849 None:intergenic 35.0%
! AGATAAAGTTCGCTTTGTTC+CGG - Chr3:78177424-78177443 None:intergenic 35.0%
! AGATATTTACCGTAGGGTTT+TGG - Chr3:78177768-78177787 None:intergenic 35.0%
! AGCAATGGTTTTTATCTTCC+GGG + Chr3:78179599-78179618 MsG0380016034.01.T01:CDS 35.0%
! ATACATTTTGTGCTTTGCCA+TGG - Chr3:78180218-78180237 None:intergenic 35.0%
! ATCGGTCCATATTGCTATTA+CGG - Chr3:78174994-78175013 None:intergenic 35.0%
! ATGAAAGGTTTTCTCAGAGT+TGG - Chr3:78179539-78179558 None:intergenic 35.0%
! ATGAGATTTGGATTGGGTTT+GGG - Chr3:78177595-78177614 None:intergenic 35.0%
! ATTTTGAGCTGTTCTTCCTT+TGG + Chr3:78180926-78180945 MsG0380016034.01.T01:CDS 35.0%
! CTTCAATTCCTTTGGAAGTT+GGG + Chr3:78174284-78174303 MsG0380016034.01.T01:intron 35.0%
! GAAGCATTAATAAGTTCGGA+TGG + Chr3:78174419-78174438 MsG0380016034.01.T01:intron 35.0%
! GACAATGTTTTCACTTTGCA+TGG - Chr3:78174233-78174252 None:intergenic 35.0%
! GACCATTGATCCGTATTTTT+AGG + Chr3:78178985-78179004 MsG0380016034.01.T01:intron 35.0%
! GGTTAGTTATGAAAGTTCGA+TGG + Chr3:78173863-78173882 MsG0380016034.01.T01:intron 35.0%
! GTCTGAAATGAGATTTGGAT+TGG - Chr3:78177602-78177621 None:intergenic 35.0%
! GTTTGGTCTGAAATGAGATT+TGG - Chr3:78177607-78177626 None:intergenic 35.0%
! TATAAAGTTCGCTTTGTTCC+GGG - Chr3:78175487-78175506 None:intergenic 35.0%
! TCTGAAATGGGATTTCGATT+GGG - Chr3:78175670-78175689 None:intergenic 35.0%
! TTTAACAGGTTTGGTTGTCT+AGG - Chr3:78174602-78174621 None:intergenic 35.0%
! TTTTACGGGTTTAACCACAA+GGG - Chr3:78178376-78178395 None:intergenic 35.0%
!! AACTAAAGGAAAGCTGGTTT+TGG + Chr3:78173739-78173758 MsG0380016034.01.T01:CDS 35.0%
!! AAGAAAAGTGCTGAGAATCT+TGG + Chr3:78179749-78179768 MsG0380016034.01.T01:CDS 35.0%
!! ACTGGATTTTAACCCCATTT+TGG - Chr3:78179964-78179983 None:intergenic 35.0%
!! GAATTAAGGAAGAGTGTTAG+AGG + Chr3:78173842-78173861 MsG0380016034.01.T01:CDS 35.0%
!! GGGAGATTAAAAGTATTGAG+AGG + Chr3:78175573-78175592 MsG0380016034.01.T01:intron 35.0%
!! GGTTTGGGTTGATTTCATAT+GGG - Chr3:78175649-78175668 None:intergenic 35.0%
!! TTGTAGCGTCTAGAGTTTTA+AGG - Chr3:78179159-78179178 None:intergenic 35.0%
!!! ACTATTGTTTTTGCAGCACT+TGG + Chr3:78180655-78180674 MsG0380016034.01.T01:CDS 35.0%
!!! CCTGTGTAGTCTTATGTTTT+GGG - Chr3:78174658-78174677 None:intergenic 35.0%
!!! CCTTTGGTTTTATACTGTGA+TGG + Chr3:78178046-78178065 MsG0380016034.01.T01:intron 35.0%
!!! CTGTGTAGTCTTATGTTTTG+GGG - Chr3:78174657-78174676 None:intergenic 35.0%
!!! TCCTGTGTAGTCTTATGTTT+TGG - Chr3:78174659-78174678 None:intergenic 35.0%
!!! TGTTGATGGAGGTGTTTTTT+AGG - Chr3:78175409-78175428 None:intergenic 35.0%
!!! TTCATTGTGGTTTTGTCTTG+CGG + Chr3:78178443-78178462 MsG0380016034.01.T01:intron 35.0%
!!! TTTGTCTGTGGTTTTGTCAT+AGG - Chr3:78174565-78174584 None:intergenic 35.0%
AAATAAGCATCCCAACGTGA+TGG - Chr3:78180358-78180377 None:intergenic 40.0%
AAATGGGTCATTGGTCAAAC+CGG - Chr3:78178917-78178936 None:intergenic 40.0%
AACGTGTCTTCTAAGTTAGG+GGG - Chr3:78174151-78174170 None:intergenic 40.0%
AACGTTATGCAATTTCAGGG+GGG + Chr3:78174015-78174034 MsG0380016034.01.T01:intron 40.0%
AAGCTTCTGTGTGTAATGGT+TGG + Chr3:78180598-78180617 MsG0380016034.01.T01:CDS 40.0%
AAGGGATTTGACAAGGTATG+AGG + Chr3:78180483-78180502 MsG0380016034.01.T01:CDS 40.0%
AATGGGATTTCGATTGGGTT+TGG - Chr3:78175665-78175684 None:intergenic 40.0%
AATTTCCCGTGGAATCTGAT+TGG - Chr3:78181031-78181050 None:intergenic 40.0%
ACCACATGTCTTTCCACATA+CGG + Chr3:78177388-78177407 MsG0380016034.01.T01:intron 40.0%
ACCCTCATTGGAGGATTTAT+GGG + Chr3:78180970-78180989 MsG0380016034.01.T01:CDS 40.0%
ACGTCGCATATTTCTTCCAT+TGG - Chr3:78175118-78175137 None:intergenic 40.0%
ACGTCTATGGAGGATCATTA+AGG + Chr3:78180768-78180787 MsG0380016034.01.T01:CDS 40.0%
AGATGAATGAGGAGCTTTCT+GGG + Chr3:78180530-78180549 MsG0380016034.01.T01:CDS 40.0%
AGCCAATCGAATATCCTGTA+AGG + Chr3:78181004-78181023 MsG0380016034.01.T01:CDS 40.0%
AGGAAAACCCAGTAGATGAA+AGG - Chr3:78179554-78179573 None:intergenic 40.0%
AGGATAATGAAAGCAATGCC+AGG - Chr3:78180844-78180863 None:intergenic 40.0%
AGTGGAGGTTGTTCTTTAAC+AGG - Chr3:78174616-78174635 None:intergenic 40.0%
ATAAGTGCAAAAGTTCAGGG+GGG + Chr3:78173934-78173953 MsG0380016034.01.T01:intron 40.0%
ATATAAGATGGCCATCACGT+TGG + Chr3:78180344-78180363 MsG0380016034.01.T01:CDS 40.0%
ATCGGTTGCCATATAAACAC+CGG + Chr3:78174465-78174484 MsG0380016034.01.T01:intron 40.0%
ATGGGATTTCGATTGGGTTT+GGG - Chr3:78175664-78175683 None:intergenic 40.0%
CAAGATGGATATTTCCTTGC+AGG - Chr3:78181054-78181073 None:intergenic 40.0%
CAATTTAACTAGTGAGCCAC+CGG + Chr3:78178895-78178914 MsG0380016034.01.T01:intron 40.0%
CACATATATGCATCTGTGTG+TGG + Chr3:78181239-78181258 MsG0380016034.01.T01:CDS 40.0%
CACCTTGTACAAAAGCTCAT+CGG + Chr3:78178468-78178487 MsG0380016034.01.T01:intron 40.0%
CATAAGTGCAAAAGTTCAGG+GGG + Chr3:78173933-78173952 MsG0380016034.01.T01:intron 40.0%
CCAATACAGTGAATTTCAGG+TGG - Chr3:78180045-78180064 None:intergenic 40.0%
CCACCTGAAATTCACTGTAT+TGG + Chr3:78180042-78180061 MsG0380016034.01.T01:CDS 40.0%
CCCAAAACATAAGACTACAC+AGG + Chr3:78174655-78174674 MsG0380016034.01.T01:intron 40.0%
CGAAACTTACAATTTCAGGG+GGG + Chr3:78174074-78174093 MsG0380016034.01.T01:intron 40.0%
CGGATCAATGGTCATAAACT+CGG - Chr3:78178978-78178997 None:intergenic 40.0%
CGTCTATGGAGGATCATTAA+GGG + Chr3:78180769-78180788 MsG0380016034.01.T01:CDS 40.0%
CGTGTGAGAAGTTAGTAAGA+TGG - Chr3:78176721-78176740 None:intergenic 40.0%
CTCAAAGCTTCTGTGTGTAA+TGG + Chr3:78180594-78180613 MsG0380016034.01.T01:CDS 40.0%
CTGCAAGGAAATATCCATCT+TGG + Chr3:78181052-78181071 MsG0380016034.01.T01:CDS 40.0%
CTGTAAGAAGGGATTTGACA+AGG + Chr3:78180476-78180495 MsG0380016034.01.T01:CDS 40.0%
CTGTGCAAGTGACATGATTT+CGG + Chr3:78176419-78176438 MsG0380016034.01.T01:intron 40.0%
CTTAGGAGAAGGAGAAAGTT+TGG + Chr3:78178533-78178552 MsG0380016034.01.T01:intron 40.0%
CTTCTGTTCGTTCAAGGATA+GGG + Chr3:78181880-78181899 MsG0380016034.01.T01:three_prime_UTR 40.0%
GAAATGCGTTTGGTCTGAAA+TGG - Chr3:78175683-78175702 None:intergenic 40.0%
GAACATAGTCATTCAAGGAC+TGG + Chr3:78181685-78181704 MsG0380016034.01.T01:three_prime_UTR 40.0%
GAAGTTGGGTGAAATATGTC+GGG + Chr3:78176631-78176650 MsG0380016034.01.T01:intron 40.0%
GAATGACATAAGGAAGCCAA+TGG - Chr3:78181445-78181464 None:intergenic 40.0%
GAGAGAGAGAGATTTATCGT+AGG - Chr3:78175837-78175856 None:intergenic 40.0%
GAGAGAGAGATATTTACCGT+AGG - Chr3:78177775-78177794 None:intergenic 40.0%
GAGCAAAGACAGTGAAAGAA+AGG - Chr3:78179574-78179593 None:intergenic 40.0%
GAGGTATACTAGCCAAAATG+GGG + Chr3:78179949-78179968 MsG0380016034.01.T01:CDS 40.0%
GCAATAGAAGAACAACCAAC+AGG - Chr3:78181185-78181204 None:intergenic 40.0%
GCACATAAGTGCAAAAGTTC+AGG + Chr3:78173930-78173949 MsG0380016034.01.T01:intron 40.0%
GCATCTGGGTATGAAATAGT+TGG + Chr3:78180151-78180170 MsG0380016034.01.T01:CDS 40.0%
GGAAGTTGGGTGAAATATGT+CGG + Chr3:78176630-78176649 MsG0380016034.01.T01:intron 40.0%
GGACAAATTAAACCAGCCAA+TGG + Chr3:78175099-78175118 MsG0380016034.01.T01:intron 40.0%
GGAGAGGGGTTGAAATTATT+GGG + Chr3:78180080-78180099 MsG0380016034.01.T01:CDS 40.0%
GGATGCTTATTTGAAGATGG+AGG + Chr3:78180366-78180385 MsG0380016034.01.T01:CDS 40.0%
GGATTAACACGACTGTCTAA+CGG - Chr3:78179138-78179157 None:intergenic 40.0%
GGGTTGAAATTATTGGGACT+GGG + Chr3:78180086-78180105 MsG0380016034.01.T01:CDS 40.0%
GGTTGAAATTATTGGGACTG+GGG + Chr3:78180087-78180106 MsG0380016034.01.T01:CDS 40.0%
GTAGTGAATAGCCAAGGTAA+AGG - Chr3:78181389-78181408 None:intergenic 40.0%
GTATGAGGAATTGGACAAAG+AGG + Chr3:78180498-78180517 MsG0380016034.01.T01:CDS 40.0%
GTCCTTACAGGATATTCGAT+TGG - Chr3:78181009-78181028 None:intergenic 40.0%
GTCTTTGCTCAAGTTAGCAA+TGG + Chr3:78179584-78179603 MsG0380016034.01.T01:CDS 40.0%
GTGAAGATAGATTGAGGTTC+TGG + Chr3:78181492-78181511 MsG0380016034.01.T01:exon 40.0%
GTTAACAACCTTAGCTCAAG+GGG + Chr3:78175244-78175263 MsG0380016034.01.T01:intron 40.0%
GTTCAAATTCTTGGAATGGC+AGG + Chr3:78180628-78180647 MsG0380016034.01.T01:CDS 40.0%
GTTCATGAATATGAAGGGAG+AGG + Chr3:78180064-78180083 MsG0380016034.01.T01:CDS 40.0%
GTTGACTGCTTCAATTCCTT+TGG + Chr3:78174276-78174295 MsG0380016034.01.T01:intron 40.0%
TAAGGACCAATCAGATTCCA+CGG + Chr3:78181022-78181041 MsG0380016034.01.T01:CDS 40.0%
TATAAGATGGCCATCACGTT+GGG + Chr3:78180345-78180364 MsG0380016034.01.T01:CDS 40.0%
TCAATGAAGAGGGTTCCAAA+TGG - Chr3:78181105-78181124 None:intergenic 40.0%
TCATAACTGGCAAGTTGTCA+AGG - Chr3:78179931-78179950 None:intergenic 40.0%
TCATGAATATGAAGGGAGAG+GGG + Chr3:78180066-78180085 MsG0380016034.01.T01:CDS 40.0%
TCCTAAGTATGTGTACGACT+AGG - Chr3:78178520-78178539 None:intergenic 40.0%
TCCTGTACATATCTCCTAGA+AGG - Chr3:78175521-78175540 None:intergenic 40.0%
TCGTACACATACTTAGGAGA+AGG + Chr3:78178522-78178541 MsG0380016034.01.T01:intron 40.0%
TCTTCTGTTCGTTCAAGGAT+AGG + Chr3:78181879-78181898 MsG0380016034.01.T01:three_prime_UTR 40.0%
TCTTTATCCTCTCTAGCATC+TGG + Chr3:78181130-78181149 MsG0380016034.01.T01:CDS 40.0%
TGACAAAAACAATGCCAGCT+AGG - Chr3:78180444-78180463 None:intergenic 40.0%
TGGCTAGTATACCTCATAAC+TGG - Chr3:78179944-78179963 None:intergenic 40.0%
TGTGGTATGCATTGTGTTGA+TGG - Chr3:78175423-78175442 None:intergenic 40.0%
TTGACAACTTGCCAGTTATG+AGG + Chr3:78179930-78179949 MsG0380016034.01.T01:CDS 40.0%
TTGATTTCATATGGGCCAAG+CGG - Chr3:78175641-78175660 None:intergenic 40.0%
TTGGGTGAGATAGAACAAGA+AGG - Chr3:78175722-78175741 None:intergenic 40.0%
TTGTCTTGCGTTCAAGGAAA+TGG + Chr3:78179508-78179527 MsG0380016034.01.T01:CDS 40.0%
! ACCTTCTAGGAGATATGTAC+AGG + Chr3:78175517-78175536 MsG0380016034.01.T01:intron 40.0%
! ACTTTTCTTTATCCCACCAG+GGG - Chr3:78179738-78179757 None:intergenic 40.0%
! CAACTCACGATTTTCACACA+TGG + Chr3:78174955-78174974 MsG0380016034.01.T01:intron 40.0%
! CACTTTTCTTTATCCCACCA+GGG - Chr3:78179739-78179758 None:intergenic 40.0%
! GAGAGAATCTGAAATGCGTT+TGG - Chr3:78177624-78177643 None:intergenic 40.0%
! GATAAAGTTCGCTTTGTTCC+GGG - Chr3:78177423-78177442 None:intergenic 40.0%
! GCTTCAATTCCTTTGGAAGT+TGG + Chr3:78174283-78174302 MsG0380016034.01.T01:intron 40.0%
! GTCAAACGGGTTCAAACAAA+CGG - Chr3:78178291-78178310 None:intergenic 40.0%
! GTCTGAAATGGGATTTCGAT+TGG - Chr3:78175671-78175690 None:intergenic 40.0%
! GTGAGAATCTGAAATGCGTT+TGG - Chr3:78175693-78175712 None:intergenic 40.0%
! GTTTTACGGGTTTAACCACA+AGG - Chr3:78178377-78178396 None:intergenic 40.0%
! TACCGATGAGCTTTTGTACA+AGG - Chr3:78178473-78178492 None:intergenic 40.0%
! TCTAATTTTGTCGATACCGC+AGG - Chr3:78178196-78178215 None:intergenic 40.0%
! TGTTCGTATTTTCACTCAGC+CGG - Chr3:78178423-78178442 None:intergenic 40.0%
! TTACGTGTTTGGTTTCCTGT+TGG + Chr3:78181167-78181186 MsG0380016034.01.T01:CDS 40.0%
!! AGTGGTTTGTTTGATGTGTG+CGG + Chr3:78178658-78178677 MsG0380016034.01.T01:intron 40.0%
!! CCAGTTCTAACAGGTTTTAC+GGG - Chr3:78178390-78178409 None:intergenic 40.0%
!! GCCAGTTCTAACAGGTTTTA+CGG - Chr3:78178391-78178410 None:intergenic 40.0%
!! GGGTTTGGGTTGATTTCATA+TGG - Chr3:78175650-78175669 None:intergenic 40.0%
!! GGTTTGGGCTGATTTGATAT+GGG - Chr3:78177580-78177599 None:intergenic 40.0%
!! TTCTGAAGCTGACAAGAAGA+AGG + Chr3:78180129-78180148 MsG0380016034.01.T01:CDS 40.0%
!!! AACTAAAGCTGGTGCTGTTT+TGG - Chr3:78174714-78174733 None:intergenic 40.0%
!!! CGGAATGCATCGGTTTTAAT+CGG - Chr3:78178271-78178290 None:intergenic 40.0%
!!! GATGCCGTCTACTTTTTGTT+AGG - Chr3:78178954-78178973 None:intergenic 40.0%
!!! TCTGCTGCATGTTTTTTTCC+TGG + Chr3:78180823-78180842 MsG0380016034.01.T01:CDS 40.0%
!!! TGTAGTCTTATGTTTTGGGG+TGG - Chr3:78174654-78174673 None:intergenic 40.0%
AACTTACAATTTCAGGGGGG+AGG + Chr3:78174077-78174096 MsG0380016034.01.T01:intron 45.0%
AAGGACCAATCAGATTCCAC+GGG + Chr3:78181023-78181042 MsG0380016034.01.T01:CDS 45.0%
AAGGGTGGAGATCAGTTTCT+TGG + Chr3:78180800-78180819 MsG0380016034.01.T01:CDS 45.0%
AATGGTTGAGTTAGTGCCTG+CGG + Chr3:78178177-78178196 MsG0380016034.01.T01:intron 45.0%
ACACGTGACCAAACTAAGAC+CGG - Chr3:78178327-78178346 None:intergenic 45.0%
ACCAAACTAAGACCGGATCT+CGG - Chr3:78178320-78178339 None:intergenic 45.0%
ACGTCGCACATTTCTTCCAT+TGG - Chr3:78177069-78177088 None:intergenic 45.0%
ACTTACAATTTCAGGGGGGA+GGG + Chr3:78174078-78174097 MsG0380016034.01.T01:intron 45.0%
AGGAATTGAAGCAGTCAACG+TGG - Chr3:78174275-78174294 None:intergenic 45.0%
ATCTCGGTTCACAGTCAAAC+GGG - Chr3:78178304-78178323 None:intergenic 45.0%
ATCTGTGTGTGGAAGATTGG+CGG + Chr3:78181250-78181269 MsG0380016034.01.T01:CDS 45.0%
ATGTTGTCAACTGGCACCAT+TGG + Chr3:78181426-78181445 MsG0380016034.01.T01:CDS 45.0%
CAGATGAATGAGGAGCTTTC+TGG + Chr3:78180529-78180548 MsG0380016034.01.T01:CDS 45.0%
CCAAGAACAAGAAGCCAAGA+TGG - Chr3:78181069-78181088 None:intergenic 45.0%
CCACATGTCTTTCCACATAC+GGG + Chr3:78177389-78177408 MsG0380016034.01.T01:intron 45.0%
CCATCTTGGCTTCTTGTTCT+TGG + Chr3:78181066-78181085 MsG0380016034.01.T01:CDS 45.0%
CCATGAGTAGTGAATAGCCA+AGG - Chr3:78181395-78181414 None:intergenic 45.0%
CCCCATAAATCCTCCAATGA+GGG - Chr3:78180974-78180993 None:intergenic 45.0%
CCCGTAAAACCTGTTAGAAC+TGG + Chr3:78178387-78178406 MsG0380016034.01.T01:intron 45.0%
CCCTCATTGGAGGATTTATG+GGG + Chr3:78180971-78180990 MsG0380016034.01.T01:CDS 45.0%
CCTTGGCTATTCACTACTCA+TGG + Chr3:78181392-78181411 MsG0380016034.01.T01:CDS 45.0%
CGCACATTTCTTCCATTGGT+TGG - Chr3:78177065-78177084 None:intergenic 45.0%
CGCATATTTCTTCCATTGGC+TGG - Chr3:78175114-78175133 None:intergenic 45.0%
CGGGGTTCAAATTCTTGGAA+TGG + Chr3:78180624-78180643 MsG0380016034.01.T01:CDS 45.0%
CTATGGAACAGCAACAGTAC+TGG + Chr3:78180883-78180902 MsG0380016034.01.T01:CDS 45.0%
CTGTAGTTGTCTTGCGTTCA+AGG + Chr3:78179502-78179521 MsG0380016034.01.T01:CDS 45.0%
CTGTGTGTAATGGTTGGAGA+CGG + Chr3:78180604-78180623 MsG0380016034.01.T01:CDS 45.0%
GAAGCAGTCAACGTGGAATA+AGG - Chr3:78174268-78174287 None:intergenic 45.0%
GACCCTCATTGGAGGATTTA+TGG + Chr3:78180969-78180988 MsG0380016034.01.T01:CDS 45.0%
GATCTCGGTTCACAGTCAAA+CGG - Chr3:78178305-78178324 None:intergenic 45.0%
GCCTAGTCGTACACATACTT+AGG + Chr3:78178516-78178535 MsG0380016034.01.T01:intron 45.0%
GCTTGCGTCATTACTCATTC+AGG - Chr3:78174537-78174556 None:intergenic 45.0%
GGAGGATTTATGGGGACAAA+AGG + Chr3:78180979-78180998 MsG0380016034.01.T01:CDS 45.0%
GGGAGAGGGGTTGAAATTAT+TGG + Chr3:78180079-78180098 MsG0380016034.01.T01:CDS 45.0%
GGGAGGTTCTATTACGTGTT+TGG + Chr3:78181156-78181175 MsG0380016034.01.T01:CDS 45.0%
GGGGTTGAAATTATTGGGAC+TGG + Chr3:78180085-78180104 MsG0380016034.01.T01:CDS 45.0%
GTAGTAACTGAAGGGAAGCT+CGG - Chr3:78179696-78179715 None:intergenic 45.0%
TAAATATGACCCCGAAGCCA+TGG + Chr3:78180198-78180217 MsG0380016034.01.T01:CDS 45.0%
TAAGTGTGCATGTAGCTTCC+CGG - Chr3:78179620-78179639 None:intergenic 45.0%
TCCCCATAAATCCTCCAATG+AGG - Chr3:78180975-78180994 None:intergenic 45.0%
TGAAATTATTGGGACTGGGG+AGG + Chr3:78180090-78180109 MsG0380016034.01.T01:CDS 45.0%
TGCATCTGTGTGTGGAAGAT+TGG + Chr3:78181247-78181266 MsG0380016034.01.T01:CDS 45.0%
TGGGGTTAAAATCCAGTGGA+CGG + Chr3:78179967-78179986 MsG0380016034.01.T01:CDS 45.0%
TGTGTGTAATGGTTGGAGAC+GGG + Chr3:78180605-78180624 MsG0380016034.01.T01:CDS 45.0%
TGTTCGAGCCGGTGTTTATA+TGG - Chr3:78174476-78174495 None:intergenic 45.0%
TTAAGGGAACATCAGAAGGG+TGG + Chr3:78180785-78180804 MsG0380016034.01.T01:CDS 45.0%
TTTGACTGTGAACCGAGATC+CGG + Chr3:78178305-78178324 MsG0380016034.01.T01:intron 45.0%
TTTGTGCTTTGCCATGGCTT+CGG - Chr3:78180212-78180231 None:intergenic 45.0%
! CTGATTTGATATGGGCCAAG+CGG - Chr3:78177572-78177591 None:intergenic 45.0%
! CTTTTCTTTATCCCACCAGG+GGG - Chr3:78179737-78179756 None:intergenic 45.0%
! GAAGGAGAAAGTTTGGTAGC+AGG + Chr3:78178540-78178559 MsG0380016034.01.T01:intron 45.0%
! GAGAAAGTTTGGTAGCAGGA+AGG + Chr3:78178544-78178563 MsG0380016034.01.T01:intron 45.0%
! GCACTTTTCTTTATCCCACC+AGG - Chr3:78179740-78179759 None:intergenic 45.0%
! GGAATCTGATTGGTCCTTAC+AGG - Chr3:78181021-78181040 None:intergenic 45.0%
! GGTATGCATTGTGTTGATGG+AGG - Chr3:78175420-78175439 None:intergenic 45.0%
! TAAGGGGTTTTTGTTCGAGC+CGG - Chr3:78174487-78174506 None:intergenic 45.0%
! TAGAACTGGCTCCAAAGATC+CGG + Chr3:78178401-78178420 MsG0380016034.01.T01:intron 45.0%
! TGTTGTTTGTGCTGAGGTGT+CGG + Chr3:78181209-78181228 MsG0380016034.01.T01:CDS 45.0%
! TTTTCACTCAGCCGGATCTT+TGG - Chr3:78178415-78178434 None:intergenic 45.0%
!! CACAGAAGCTTTGAGCATTC+AGG - Chr3:78180589-78180608 None:intergenic 45.0%
!! CTGACAAGAAGAAGGCATCT+GGG + Chr3:78180137-78180156 MsG0380016034.01.T01:CDS 45.0%
!! GCTGATTGTTGTTTGTGCTG+AGG + Chr3:78181203-78181222 MsG0380016034.01.T01:CDS 45.0%
!! GGGTTTGGGCTGATTTGATA+TGG - Chr3:78177581-78177600 None:intergenic 45.0%
!! TCTGGGTGGAAACTTGTTGT+AGG + Chr3:78180547-78180566 MsG0380016034.01.T01:CDS 45.0%
!! TCTTTGGAGCCAGTTCTAAC+AGG - Chr3:78178399-78178418 None:intergenic 45.0%
!! TGGAAGGCATTCTATGCTTC+AGG + Chr3:78181279-78181298 MsG0380016034.01.T01:CDS 45.0%
!! TGGAGCATTGCATGACAAGT+TGG + Chr3:78173759-78173778 MsG0380016034.01.T01:CDS 45.0%
!! TTTTTGCTAGCTTCGTCGCT+GGG + Chr3:78175950-78175969 MsG0380016034.01.T01:intron 45.0%
!!! AAAGCTGGTGCTGTTTTGGA+GGG - Chr3:78174710-78174729 None:intergenic 45.0%
!!! TAAAGCTGGTGCTGTTTTGG+AGG - Chr3:78174711-78174730 None:intergenic 45.0%
!!! TTTTTTGCTAGCTTCGTCGC+TGG + Chr3:78175949-78175968 MsG0380016034.01.T01:intron 45.0%
!! TATAATATATTATGAATTAT+TGG - Chr3:78176922-78176941 None:intergenic 5.0%
!!! ATTTTAATAAAAATTATCTT+TGG + Chr3:78179029-78179048 MsG0380016034.01.T01:intron 5.0%
AATCCTCCAATGAGGGTCAG+AGG - Chr3:78180967-78180986 None:intergenic 50.0%
ACCGAGATCCGGTCTTAGTT+TGG + Chr3:78178316-78178335 MsG0380016034.01.T01:intron 50.0%
ACTCAACTCCCCTTGAGCTA+AGG - Chr3:78175255-78175274 None:intergenic 50.0%
AGCGCCATTAAATGAGCACG+AGG + Chr3:78179856-78179875 MsG0380016034.01.T01:CDS 50.0%
AGGGAGGCTGTAGTAACTGA+AGG - Chr3:78179705-78179724 None:intergenic 50.0%
AGGTAAAGGGTAGCTGACAC+AGG - Chr3:78181375-78181394 None:intergenic 50.0%
ATCCTCTCTAGCATCTGGCT+CGG + Chr3:78181135-78181154 MsG0380016034.01.T01:CDS 50.0%
ATGTCAGCGTACGTCTATGG+AGG + Chr3:78180758-78180777 MsG0380016034.01.T01:CDS 50.0%
ATTATTGGGACTGGGGAGGA+AGG + Chr3:78180094-78180113 MsG0380016034.01.T01:CDS 50.0%
CACATACGGGAGTTATCTCC+CGG + Chr3:78175466-78175485 MsG0380016034.01.T01:intron 50.0%
CAGATGGAGTGTACCCAACA+GGG - Chr3:78179997-78180016 None:intergenic 50.0%
CCCGTATGTGGAAAGACATG+TGG - Chr3:78177392-78177411 None:intergenic 50.0%
CGTTATCACGTCATCCCTTG+TGG + Chr3:78178359-78178378 MsG0380016034.01.T01:intron 50.0%
CTGTTCGTTCAAGGATAGGG+AGG + Chr3:78181883-78181902 MsG0380016034.01.T01:three_prime_UTR 50.0%
CTTACAATTTCAGGGGGGAG+GGG + Chr3:78174079-78174098 MsG0380016034.01.T01:intron 50.0%
CTTATCCTTGGAATTGCCGC+TGG + Chr3:78180733-78180752 MsG0380016034.01.T01:CDS 50.0%
GCTATGTCAGCGTACGTCTA+TGG + Chr3:78180755-78180774 MsG0380016034.01.T01:CDS 50.0%
GGAGACGGGGTTCAAATTCT+TGG + Chr3:78180619-78180638 MsG0380016034.01.T01:CDS 50.0%
GGCACAAGCTCAGATGAATG+AGG + Chr3:78180519-78180538 MsG0380016034.01.T01:CDS 50.0%
GGGAGGCTGTAGTAACTGAA+GGG - Chr3:78179704-78179723 None:intergenic 50.0%
GGGGTTAAAATCCAGTGGAC+GGG + Chr3:78179968-78179987 MsG0380016034.01.T01:CDS 50.0%
GGGTTAAAATCCAGTGGACG+GGG + Chr3:78179969-78179988 MsG0380016034.01.T01:CDS 50.0%
GTGTCAGCTACCCTTTACCT+TGG + Chr3:78181375-78181394 MsG0380016034.01.T01:CDS 50.0%
GTGTGTAATGGTTGGAGACG+GGG + Chr3:78180606-78180625 MsG0380016034.01.T01:CDS 50.0%
GTTGGGTACACTCCATCTGA+TGG + Chr3:78179998-78180017 MsG0380016034.01.T01:CDS 50.0%
TAATCTGCACCGCCATCAGA+TGG - Chr3:78180013-78180032 None:intergenic 50.0%
TAGCAGGAAGGAGATGCAGA+AGG + Chr3:78178556-78178575 MsG0380016034.01.T01:intron 50.0%
TCAGATGGAGTGTACCCAAC+AGG - Chr3:78179998-78180017 None:intergenic 50.0%
TCAGTACCTCTGACCCTCAT+TGG + Chr3:78180958-78180977 MsG0380016034.01.T01:CDS 50.0%
TCCCTGTTAGTAGCATCCCT+CGG - Chr3:78180699-78180718 None:intergenic 50.0%
TGAATGAGGAGCTTTCTGGG+TGG + Chr3:78180533-78180552 MsG0380016034.01.T01:CDS 50.0%
TGCTTCTTGTACGGGCTTGT+TGG - Chr3:78174405-78174424 None:intergenic 50.0%
TGGAGGGTTCTCGAGTTCAT+TGG + Chr3:78180383-78180402 MsG0380016034.01.T01:CDS 50.0%
TGTCGAGGCTATAGTAGGAG+TGG + Chr3:78178640-78178659 MsG0380016034.01.T01:intron 50.0%
TTACAATTTCAGGGGGGAGG+GGG + Chr3:78174080-78174099 MsG0380016034.01.T01:intron 50.0%
TTCCACGGGAAATTCCTGCA+AGG + Chr3:78181037-78181056 MsG0380016034.01.T01:CDS 50.0%
TTCCTTGCAGGAATTTCCCG+TGG - Chr3:78181042-78181061 None:intergenic 50.0%
TTCGACCTGCAGAGTTTGAG+TGG + Chr3:78181348-78181367 MsG0380016034.01.T01:CDS 50.0%
TTGTGCTTTGCCATGGCTTC+GGG - Chr3:78180211-78180230 None:intergenic 50.0%
! GGTGCTGGAACTCTTCCATT+TGG + Chr3:78181087-78181106 MsG0380016034.01.T01:CDS 50.0%
! GGTTTGTTTGATGTGTGCGG+CGG + Chr3:78178661-78178680 MsG0380016034.01.T01:intron 50.0%
! TGGCTTCTTGTTCTTGGTGC+TGG + Chr3:78181072-78181091 MsG0380016034.01.T01:CDS 50.0%
!! GCTGACAAGAAGAAGGCATC+TGG + Chr3:78180136-78180155 MsG0380016034.01.T01:CDS 50.0%
!! GTTGTCTAGGTGTTGACGCA+GGG - Chr3:78174589-78174608 None:intergenic 50.0%
!! TTGTCTAGGTGTTGACGCAG+GGG - Chr3:78174588-78174607 None:intergenic 50.0%
!! TTTTGCTAGCTTCGTCGCTG+GGG + Chr3:78175951-78175970 MsG0380016034.01.T01:intron 50.0%
!!! AAGCTGGTGCTGTTTTGGAG+GGG - Chr3:78174709-78174728 None:intergenic 50.0%
!!! GTCTTATGTTTTGGGGTGGC+AGG - Chr3:78174650-78174669 None:intergenic 50.0%
ACGTACGCTGACATAGCCAG+CGG - Chr3:78180752-78180771 None:intergenic 55.0%
AGGTTAAACGACGCCGTAGC+TGG + Chr3:78177829-78177848 MsG0380016034.01.T01:intron 55.0%
CAGGTCCACTCAAACTCTGC+AGG - Chr3:78181356-78181375 None:intergenic 55.0%
CATAGCCAGCGGCAATTCCA+AGG - Chr3:78180741-78180760 None:intergenic 55.0%
CCAGCTTTGCCTTGTGGTGT+GGG - Chr3:78174682-78174701 None:intergenic 55.0%
CCCGAGGGATGCTACTAACA+GGG + Chr3:78180695-78180714 MsG0380016034.01.T01:CDS 55.0%
CCCTGTTAGTAGCATCCCTC+GGG - Chr3:78180698-78180717 None:intergenic 55.0%
CGGGAGATAACTCCCGTATG+TGG - Chr3:78175468-78175487 None:intergenic 55.0%
GGGTACACTCCATCTGATGG+CGG + Chr3:78180001-78180020 MsG0380016034.01.T01:CDS 55.0%
GTACCTCTGACCCTCATTGG+AGG + Chr3:78180961-78180980 MsG0380016034.01.T01:CDS 55.0%
TACAATTTCAGGGGGGAGGG+GGG + Chr3:78174081-78174100 MsG0380016034.01.T01:intron 55.0%
TACACAGGACCCACACCACA+AGG + Chr3:78174670-78174689 MsG0380016034.01.T01:intron 55.0%
TCATGTCTCCAGCATCCCGA+GGG + Chr3:78180680-78180699 MsG0380016034.01.T01:CDS 55.0%
TCCAGCTTTGCCTTGTGGTG+TGG - Chr3:78174683-78174702 None:intergenic 55.0%
TCCCGAGGGATGCTACTAAC+AGG + Chr3:78180694-78180713 MsG0380016034.01.T01:CDS 55.0%
TGGGTCATTGGTCAAACCGG+TGG - Chr3:78178914-78178933 None:intergenic 55.0%
TGTGCTTTGCCATGGCTTCG+GGG - Chr3:78180210-78180229 None:intergenic 55.0%
TGTGTGTGGAAGATTGGCGG+TGG + Chr3:78181253-78181272 MsG0380016034.01.T01:CDS 55.0%
TTCATGTCTCCAGCATCCCG+AGG + Chr3:78180679-78180698 MsG0380016034.01.T01:CDS 55.0%
TTGACGCAGGGGTTTGTCTG+TGG - Chr3:78174577-78174596 None:intergenic 55.0%
! ACCTCTTTTCTTGGGCCGCT+TGG + Chr3:78175623-78175642 MsG0380016034.01.T01:intron 55.0%
! TCCTCTCTAGCATCTGGCTC+GGG + Chr3:78181136-78181155 MsG0380016034.01.T01:CDS 55.0%
!! CAGGAGTGCTGTTTGAGTGG+AGG - Chr3:78174631-78174650 None:intergenic 55.0%
!! GGTTGTCTAGGTGTTGACGC+AGG - Chr3:78174590-78174609 None:intergenic 55.0%
!! TGGCAGGAGTGCTGTTTGAG+TGG - Chr3:78174634-78174653 None:intergenic 55.0%
!! TGTTTGTGCTGAGGTGTCGG+TGG + Chr3:78181212-78181231 MsG0380016034.01.T01:CDS 55.0%
ACAATTTCAGGGGGGAGGGG+GGG + Chr3:78174082-78174101 MsG0380016034.01.T01:intron 60.0%
AGTAGCATCCCTCGGGATGC+TGG - Chr3:78180691-78180710 None:intergenic 60.0%
CCCACACCACAAGGCAAAGC+TGG + Chr3:78174679-78174698 MsG0380016034.01.T01:intron 60.0%
GCCAAGCGGCCCAAGAAAAG+AGG - Chr3:78175627-78175646 None:intergenic 60.0%
GGCAGTCCAGCTTTGCCTTG+TGG - Chr3:78174688-78174707 None:intergenic 60.0%
GGGACTGGGGAGGAAGGTTT+GGG + Chr3:78180100-78180119 MsG0380016034.01.T01:CDS 60.0%
GTGTGGAAGATTGGCGGTGG+TGG + Chr3:78181256-78181275 MsG0380016034.01.T01:CDS 60.0%
TCCCGAGCCAGATGCTAGAG+AGG - Chr3:78181140-78181159 None:intergenic 60.0%
TCTTTATCCCACCAGGGGGC+TGG - Chr3:78179733-78179752 None:intergenic 60.0%
TGGGACTGGGGAGGAAGGTT+TGG + Chr3:78180099-78180118 MsG0380016034.01.T01:CDS 60.0%
! AGTGGACGGGGTACCCTGTT+GGG + Chr3:78179981-78180000 MsG0380016034.01.T01:CDS 60.0%
! TGGAAGATTGGCGGTGGTGG+TGG + Chr3:78181259-78181278 MsG0380016034.01.T01:CDS 60.0%
!! AGATTGGCGGTGGTGGTGGA+AGG + Chr3:78181263-78181282 MsG0380016034.01.T01:CDS 60.0%
!! TCTCTAGCATCTGGCTCGGG+AGG + Chr3:78181139-78181158 MsG0380016034.01.T01:CDS 60.0%
AATTTCAGGGGGGAGGGGGG+GGG + Chr3:78174084-78174103 MsG0380016034.01.T01:intron 65.0%
CAATTTCAGGGGGGAGGGGG+GGG + Chr3:78174083-78174102 MsG0380016034.01.T01:intron 65.0%
CTTACTGCCAGCCCCCTGGT+GGG + Chr3:78179723-78179742 MsG0380016034.01.T01:CDS 65.0%
! CAACAGGGTACCCCGTCCAC+TGG - Chr3:78179982-78180001 None:intergenic 65.0%
! CACCAGGGGGCTGGCAGTAA+GGG - Chr3:78179724-78179743 None:intergenic 65.0%
! CAGTGGACGGGGTACCCTGT+TGG + Chr3:78179980-78179999 MsG0380016034.01.T01:CDS 65.0%
ATTTCAGGGGGGAGGGGGGG+GGG + Chr3:78174085-78174104 MsG0380016034.01.T01:intron 70.0%
CCTTACTGCCAGCCCCCTGG+TGG + Chr3:78179722-78179741 MsG0380016034.01.T01:CDS 70.0%
CTCCCTTACTGCCAGCCCCC+TGG + Chr3:78179719-78179738 MsG0380016034.01.T01:CDS 70.0%
! CAGGGGGCTGGCAGTAAGGG+AGG - Chr3:78179721-78179740 None:intergenic 70.0%
! CCACCAGGGGGCTGGCAGTA+AGG - Chr3:78179725-78179744 None:intergenic 70.0%
TTTCAGGGGGGAGGGGGGGG+GGG + Chr3:78174086-78174105 MsG0380016034.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 78173638 78181954 78173638 ID=MsG0380016034.01;Name=MsG0380016034.01
Chr3 mRNA 78173638 78181954 78173638 ID=MsG0380016034.01.T01;Parent=MsG0380016034.01;Name=MsG0380016034.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0|0.5|0.5|1|1|2|448|760
Chr3 exon 78173638 78173863 78173638 ID=MsG0380016034.01.T01:exon:18145;Parent=MsG0380016034.01.T01
Chr3 exon 78179450 78181954 78179450 ID=MsG0380016034.01.T01:exon:18146;Parent=MsG0380016034.01.T01
Chr3 CDS 78173638 78173863 78173638 ID=MsG0380016034.01.T01:cds;Parent=MsG0380016034.01.T01
Chr3 CDS 78179450 78181506 78179450 ID=MsG0380016034.01.T01:cds;Parent=MsG0380016034.01.T01
Chr3 three_prime_UTR 78181507 78181954 78181507 ID=MsG0380016034.01.T01:three_prime_utr;Parent=MsG0380016034.01.T01
Gene Sequence

>MsG0380016034.01.T01

ATGGTTAACAACAAATCTTCCATTAATTTAACCAAGCATCTTATAGAACATAGGAGAAACAAAGACATTGAAACAAGATTTCACTTTCTTAGAGATGAAGTAACTAAAGGAAAGCTGGTTTTGGAGCATTGCATGACAAGTTGGAGATGCCATGACAAACATTTGAAAACTAAGAAGCATGATGTGATTAGTGGAAACAAACATGAATTAAGGAAGAGTGTTAGAGATTTGAAATCACTGTTGGAATTAGCTTTGATTCACGGAAAACTTCTCAGCATCTGTAGTTGTCTTGCGTTCAAGGAAATGGAGTTACCAACTCTGAGAAAACCTTTCATCTACTGGGTTTTCCTTTCTTTCACTGTCTTTGCTCAAGTTAGCAATGGTTTTTATCTTCCGGGAAGCTACATGCACACTTATTCCAATGGAGAATATATTAATGCCAAAGTCAATTCGTTGACTTCTATTGAAACCGAGCTTCCCTTCAGTTACTACAGCCTCCCTTACTGCCAGCCCCCTGGTGGGATAAAGAAAAGTGCTGAGAATCTTGGAGAACTTCTTATGGGTGATCAGATTGATAATTCACCCTATCGATTTCGAATGAACAAAAATGAGACTCTCTATCTCTGTACAACAGCGCCATTAAATGAGCACGAGGTAAAACTACTCAAACAAAGAACCCGTGATCTGTATCAAGTGAATATGATCCTTGACAACTTGCCAGTTATGAGGTATACTAGCCAAAATGGGGTTAAAATCCAGTGGACGGGGTACCCTGTTGGGTACACTCCATCTGATGGCGGTGCAGATTACATCATTAACCACCTGAAATTCACTGTATTGGTTCATGAATATGAAGGGAGAGGGGTTGAAATTATTGGGACTGGGGAGGAAGGTTTGGGCATTATTTCTGAAGCTGACAAGAAGAAGGCATCTGGGTATGAAATAGTTGGTTTTCATGTTGTCCCCTGTAGTATTAAATATGACCCCGAAGCCATGGCAAAGCACAAAATGTATGATAGTATCTCTTCTGTAAGCTGCCCAAATGAGCTTGACAAATATCAGGTAATAAAAGAGCAAGAAAGGATATCATTCACATATGATGTTGAATTTGTGAAAAGTGATATAAGATGGCCATCACGTTGGGATGCTTATTTGAAGATGGAGGGTTCTCGAGTTCATTGGTTCTCAATCCTAAATTCACTGATGGTTATTATTTTCCTAGCTGGCATTGTTTTTGTCATTTTCTTAAGAACTGTAAGAAGGGATTTGACAAGGTATGAGGAATTGGACAAAGAGGCACAAGCTCAGATGAATGAGGAGCTTTCTGGGTGGAAACTTGTTGTAGGTGATGTATTTAGGGAGCCTGAATGCTCAAAGCTTCTGTGTGTAATGGTTGGAGACGGGGTTCAAATTCTTGGAATGGCAGGTGTTACTATTGTTTTTGCAGCACTTGGTTTCATGTCTCCAGCATCCCGAGGGATGCTACTAACAGGGATGATCATTTTATATCTTATCCTTGGAATTGCCGCTGGCTATGTCAGCGTACGTCTATGGAGGATCATTAAGGGAACATCAGAAGGGTGGAGATCAGTTTCTTGGTCTGCTGCATGTTTTTTTCCTGGCATTGCTTTCATTATCCTTACAGTACTCAATTTTATTCTATGGAACAGCAACAGTACTGGTGCTATACCTATTTCCTTGTATTTTGAGCTGTTCTTCCTTTGGTTCTGTATTTCAGTACCTCTGACCCTCATTGGAGGATTTATGGGGACAAAAGGAGAGCCAATCGAATATCCTGTAAGGACCAATCAGATTCCACGGGAAATTCCTGCAAGGAAATATCCATCTTGGCTTCTTGTTCTTGGTGCTGGAACTCTTCCATTTGGAACCCTCTTCATTGAGCTTTTCTTTATCCTCTCTAGCATCTGGCTCGGGAGGTTCTATTACGTGTTTGGTTTCCTGTTGGTTGTTCTTCTATTGCTGATTGTTGTTTGTGCTGAGGTGTCGGTGGTGCTCACATATATGCATCTGTGTGTGGAAGATTGGCGGTGGTGGTGGAAGGCATTCTATGCTTCAGGTTCTGTTGCTCTTTATGTATTCTTGTACTCCATTAACTACTTGGTTTTCGACCTGCAGAGTTTGAGTGGACCTGTGTCAGCTACCCTTTACCTTGGCTATTCACTACTCATGGCAATTGCAATCATGTTGTCAACTGGCACCATTGGCTTCCTTATGTCATTCTACTTTGTGCATTACTTGTTCTCATCAGTGAAGATAGATTGA
Protein sequence

>MsG0380016034.01.T01

MVNNKSSINLTKHLIEHRRNKDIETRFHFLRDEVTKGKLVLEHCMTSWRCHDKHLKTKKHDVISGNKHELRKSVRDLKSLLELALIHGKLLSICSCLAFKEMELPTLRKPFIYWVFLSFTVFAQVSNGFYLPGSYMHTYSNGEYINAKVNSLTSIETELPFSYYSLPYCQPPGGIKKSAENLGELLMGDQIDNSPYRFRMNKNETLYLCTTAPLNEHEVKLLKQRTRDLYQVNMILDNLPVMRYTSQNGVKIQWTGYPVGYTPSDGGADYIINHLKFTVLVHEYEGRGVEIIGTGEEGLGIISEADKKKASGYEIVGFHVVPCSIKYDPEAMAKHKMYDSISSVSCPNELDKYQVIKEQERISFTYDVEFVKSDIRWPSRWDAYLKMEGSRVHWFSILNSLMVIIFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPECSKLLCVMVGDGVQILGMAGVTIVFAALGFMSPASRGMLLTGMIILYLILGIAAGYVSVRLWRIIKGTSEGWRSVSWSAACFFPGIAFIILTVLNFILWNSNSTGAIPISLYFELFFLWFCISVPLTLIGGFMGTKGEPIEYPVRTNQIPREIPARKYPSWLLVLGAGTLPFGTLFIELFFILSSIWLGRFYYVFGFLLVVLLLLIVVCAEVSVVLTYMHLCVEDWRWWWKAFYASGSVALYVFLYSINYLVFDLQSLSGPVSATLYLGYSLLMAIAIMLSTGTIGFLMSFYFVHYLFSSVKID*