AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004774.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004774.01.T01 MTR_1g086600 88.791 339 12 4 1 331 1 321 0.0 602
MsG0180004774.01.T01 MTR_1g086600 98.148 270 5 0 332 601 401 670 0.0 552
MsG0180004774.01.T01 MTR_7g109830 81.685 273 50 0 329 601 374 646 8.49e-163 481
MsG0180004774.01.T01 MTR_7g109830 67.508 317 77 4 23 331 1 299 4.01e-148 443
MsG0180004774.01.T01 MTR_8g099420 56.618 272 118 0 329 600 377 648 7.39e-101 321
MsG0180004774.01.T01 MTR_8g099420 41.456 316 159 4 24 331 5 302 3.34e-77 258
MsG0180004774.01.T01 MTR_5g009360 55.882 272 120 0 329 600 250 521 9.73e-101 317
MsG0180004774.01.T01 MTR_5g009360 43.429 175 89 1 157 331 11 175 2.24e-38 149
MsG0180004774.01.T01 MTR_5g009350 56.985 272 117 0 329 600 376 647 3.98e-100 318
MsG0180004774.01.T01 MTR_5g009350 43.312 314 152 3 26 331 6 301 7.76e-80 265
MsG0180004774.01.T01 MTR_5g009350 56.272 279 121 1 329 606 376 654 4.21e-100 319
MsG0180004774.01.T01 MTR_5g009350 43.312 314 152 3 26 331 6 301 1.14e-79 265
MsG0180004774.01.T01 MTR_5g009360 55.197 279 124 1 329 606 376 654 5.63e-99 316
MsG0180004774.01.T01 MTR_5g009360 42.722 316 155 3 24 331 4 301 1.95e-76 256
MsG0180004774.01.T01 MTR_4g068670 51.838 272 131 0 329 600 373 644 6.51e-94 302
MsG0180004774.01.T01 MTR_4g068670 35.759 316 171 7 26 331 5 298 4.19e-53 192
MsG0180004774.01.T01 MTR_1g034360 52.574 272 129 0 329 600 375 646 1.03e-93 302
MsG0180004774.01.T01 MTR_1g034360 36.508 315 172 6 26 331 5 300 3.75e-59 209
MsG0180004774.01.T01 MTR_5g009350 43.312 314 152 3 26 331 6 301 1.08e-80 265
MsG0180004774.01.T01 MTR_5g009350 54.497 189 84 1 332 518 379 567 2.58e-60 211
MsG0180004774.01.T01 MTR_5g009350 43.312 314 152 3 26 331 6 301 1.36e-80 265
MsG0180004774.01.T01 MTR_5g009350 59.880 167 67 0 332 498 379 545 1.23e-59 209
MsG0180004774.01.T01 MTR_1g104810 42.182 275 153 5 329 599 337 609 7.17e-53 191
MsG0180004774.01.T01 MTR_1g104810 33.457 269 153 5 77 336 19 270 8.68e-36 142
MsG0180004774.01.T01 MTR_1g104810 42.182 275 153 5 329 599 404 676 1.81e-52 191
MsG0180004774.01.T01 MTR_1g104810 29.683 347 197 9 20 336 8 337 3.02e-36 144
MsG0180004774.01.T01 MTR_1g030290 37.631 287 170 6 329 608 410 694 7.28e-45 170
MsG0180004774.01.T01 MTR_1g030290 28.767 292 158 8 65 328 52 321 7.34e-26 113
MsG0180004774.01.T01 MTR_3g087980 37.276 279 167 5 329 600 408 685 1.66e-43 166
MsG0180004774.01.T01 MTR_3g087980 29.352 293 158 9 63 328 49 319 1.51e-24 108
MsG0180004774.01.T01 MTR_3g082660 35.766 274 168 5 329 595 442 714 9.27e-35 140
MsG0180004774.01.T01 MTR_3g082660 28.519 270 158 7 81 328 97 353 7.63e-23 103
MsG0180004774.01.T01 MTR_1g063110 28.866 291 160 10 253 502 191 475 1.18e-23 105
MsG0180004774.01.T01 MTR_5g007640 30.255 314 154 13 253 522 229 521 1.74e-22 102
MsG0180004774.01.T01 MTR_4g057730 28.664 307 159 12 253 520 189 474 2.36e-22 101
MsG0180004774.01.T01 MTR_4g057730 28.720 289 159 11 253 502 189 469 2.62e-22 100
MsG0180004774.01.T01 MTR_2g095510 29.316 307 157 11 253 520 186 471 9.28e-22 99.8
MsG0180004774.01.T01 MTR_2g095510 29.771 262 138 9 253 475 186 440 2.38e-21 97.8
MsG0180004774.01.T01 MTR_4g057730 29.008 262 140 10 253 475 189 443 7.77e-21 96.3
MsG0180004774.01.T01 MTR_8g083170 30.112 269 167 8 344 600 457 716 1.55e-20 96.7
MsG0180004774.01.T01 MTR_1g063120 26.316 380 203 13 253 584 195 545 1.94e-20 95.5
MsG0180004774.01.T01 MTR_2g105570 28.219 365 193 15 180 502 138 475 2.02e-19 92.4
MsG0180004774.01.T01 MTR_4g077900 28.819 288 164 7 253 502 121 405 5.42e-19 90.9
MsG0180004774.01.T01 MTR_5g023730 23.256 516 335 16 104 570 40 543 7.39e-19 90.9
MsG0180004774.01.T01 MTR_3g084450 29.740 269 167 8 344 600 454 712 7.49e-19 91.3
MsG0180004774.01.T01 MTR_1g026310 25.763 295 164 9 252 502 204 487 1.15e-18 90.1
MsG0180004774.01.T01 MTR_3g084450 29.740 269 167 8 344 600 246 504 1.31e-18 89.7
MsG0180004774.01.T01 MTR_5g008820 23.620 453 265 14 108 504 41 468 1.36e-18 89.7
MsG0180004774.01.T01 MTR_3g084470 30.224 268 166 8 344 600 450 707 1.46e-18 90.1
MsG0180004774.01.T01 MTR_4g005750 29.795 292 157 11 253 502 183 468 1.95e-18 89.4
MsG0180004774.01.T01 MTR_5g027480 25.886 367 201 10 253 561 198 551 2.11e-18 89.4
MsG0180004774.01.T01 MTR_1569s0010 28.107 338 195 14 226 522 157 487 6.33e-18 87.8
MsG0180004774.01.T01 MTR_4g128337 27.273 385 200 13 208 552 168 512 7.02e-18 87.8
MsG0180004774.01.T01 MTR_1g090737 28.105 306 163 10 253 520 212 498 1.28e-17 87.0
MsG0180004774.01.T01 MTR_3g064420 24.726 457 249 18 108 497 41 469 9.62e-17 84.3
MsG0180004774.01.T01 MTR_4g013210 28.522 291 180 10 251 524 68 347 1.21e-16 82.8
MsG0180004774.01.T01 MTR_4g013210 28.522 291 180 10 251 524 220 499 2.07e-16 83.2
MsG0180004774.01.T01 MTR_1g073180 27.055 292 177 11 244 502 173 461 3.46e-16 82.4
MsG0180004774.01.T01 MTR_1g073180 27.055 292 177 11 244 502 195 483 4.13e-16 82.0
MsG0180004774.01.T01 MTR_8g074120 26.462 325 179 10 230 501 114 431 4.96e-16 81.6
MsG0180004774.01.T01 MTR_8g074040 24.878 410 231 16 140 497 123 507 1.42e-15 80.5
MsG0180004774.01.T01 MTR_8g074040 24.878 410 231 16 140 497 5 389 1.67e-15 79.7
MsG0180004774.01.T01 MTR_5g008800 23.529 391 234 10 159 504 100 470 2.16e-15 79.7
MsG0180004774.01.T01 MTR_4g121600 23.519 557 312 19 108 595 47 558 5.80e-15 78.6
MsG0180004774.01.T01 MTR_2g044180 22.376 505 276 14 157 595 13 467 4.10e-13 72.4
MsG0180004774.01.T01 MTR_2g044180 22.376 505 276 14 157 595 104 558 4.95e-13 72.4
MsG0180004774.01.T01 MTR_4g013210 27.881 269 165 11 251 503 220 475 1.36e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004774.01.T01 AT2G47240 51.054 664 222 11 23 601 1 646 0.0 647
MsG0180004774.01.T01 AT2G47240 51.054 664 222 11 23 601 1 646 0.0 647
MsG0180004774.01.T01 AT2G47240 51.054 664 222 11 23 601 1 646 0.0 647
MsG0180004774.01.T01 AT2G47240 50.419 597 201 10 90 601 1 587 0.0 578
MsG0180004774.01.T01 AT4G11030 56.250 272 119 0 329 600 377 648 4.92e-100 319
MsG0180004774.01.T01 AT4G11030 41.509 318 158 5 23 331 4 302 5.35e-77 258
MsG0180004774.01.T01 AT4G23850 52.574 272 129 0 329 600 377 648 8.72e-97 310
MsG0180004774.01.T01 AT4G23850 40.762 341 169 4 22 354 3 318 1.20e-80 268
MsG0180004774.01.T01 AT1G64400 54.044 272 125 0 329 600 377 648 1.57e-95 307
MsG0180004774.01.T01 AT1G64400 40.828 338 166 5 26 354 6 318 8.19e-76 254
MsG0180004774.01.T01 AT1G49430 49.466 281 139 3 329 606 377 657 2.19e-85 280
MsG0180004774.01.T01 AT1G49430 37.742 310 167 3 30 331 11 302 9.20e-61 214
MsG0180004774.01.T01 AT1G49430 37.742 310 167 3 30 331 11 302 4.75e-62 214
MsG0180004774.01.T01 AT1G49430 47.619 126 65 1 329 453 377 502 9.99e-31 126
MsG0180004774.01.T01 AT3G05970 45.091 275 145 5 329 599 407 679 7.54e-60 212
MsG0180004774.01.T01 AT3G05970 32.107 299 161 6 64 336 58 340 6.90e-33 134
MsG0180004774.01.T01 AT5G27600 42.545 275 152 5 329 599 407 679 1.35e-58 209
MsG0180004774.01.T01 AT5G27600 33.221 298 162 6 46 331 63 335 3.00e-35 142
MsG0180004774.01.T01 AT1G77590 38.828 273 157 6 329 593 260 530 4.18e-47 174
MsG0180004774.01.T01 AT1G77590 28.191 188 116 2 141 328 3 171 3.97e-18 88.6
MsG0180004774.01.T01 AT1G77590 38.828 273 157 6 329 593 406 676 2.40e-46 174
MsG0180004774.01.T01 AT1G77590 26.829 287 168 7 64 328 51 317 8.00e-22 100
MsG0180004774.01.T01 AT2G04350 36.201 279 170 5 329 600 435 712 1.20e-39 155
MsG0180004774.01.T01 AT2G04350 25.000 284 177 6 67 328 77 346 1.50e-19 93.6
MsG0180004774.01.T01 AT2G04350 36.201 279 170 5 329 600 435 712 1.20e-39 155
MsG0180004774.01.T01 AT2G04350 25.000 284 177 6 67 328 77 346 1.50e-19 93.6
MsG0180004774.01.T01 AT2G47245 55.446 101 37 1 25 125 36 128 1.44e-29 114
MsG0180004774.01.T01 AT3G21230 28.385 384 197 14 209 553 189 533 1.23e-21 99.4
MsG0180004774.01.T01 AT3G21230 28.760 379 192 14 209 548 189 528 1.62e-21 99.4
MsG0180004774.01.T01 AT4G19010 29.795 292 156 10 253 502 205 489 1.70e-21 99.0
MsG0180004774.01.T01 AT2G17650 25.979 485 248 16 108 520 88 533 1.78e-20 95.9
MsG0180004774.01.T01 AT1G66120 24.792 480 250 16 108 517 41 479 2.27e-20 95.5
MsG0180004774.01.T01 AT3G21230 28.529 333 173 10 209 502 189 495 2.55e-20 95.1
MsG0180004774.01.T01 AT5G16370 26.637 443 263 16 108 502 42 470 5.52e-20 94.4
MsG0180004774.01.T01 AT1G65060 30.530 321 157 14 253 528 206 505 1.01e-19 93.6
MsG0180004774.01.T01 AT1G65060 31.835 267 131 11 253 475 206 465 2.65e-19 91.7
MsG0180004774.01.T01 AT5G16340 28.529 333 183 13 216 502 147 470 6.31e-19 90.9
MsG0180004774.01.T01 AT1G51680 29.859 355 190 13 253 566 203 539 1.45e-18 89.7
MsG0180004774.01.T01 AT3G16910 24.680 547 319 20 108 595 49 561 2.61e-18 89.0
MsG0180004774.01.T01 AT5G63380 30.208 288 156 12 253 502 205 485 3.45e-18 88.6
MsG0180004774.01.T01 AT1G65880 24.062 453 256 14 108 497 41 468 3.50e-18 88.6
MsG0180004774.01.T01 AT1G65890 23.770 488 245 19 108 517 41 479 3.94e-18 88.6
MsG0180004774.01.T01 AT4G05160 29.412 306 158 10 253 520 191 476 6.27e-18 87.8
MsG0180004774.01.T01 AT3G23790 27.839 273 168 9 344 600 455 714 7.75e-18 88.2
MsG0180004774.01.T01 AT3G23790 26.772 254 146 8 96 328 100 334 1.54e-11 67.8
MsG0180004774.01.T01 AT1G68270 27.569 399 217 19 140 502 81 443 8.97e-18 87.4
MsG0180004774.01.T01 AT1G20560 23.490 447 265 15 108 497 43 469 1.35e-17 86.7
MsG0180004774.01.T01 AT1G75960 28.115 313 175 12 230 499 162 467 2.42e-17 85.9
MsG0180004774.01.T01 AT4G14070 27.612 268 164 8 344 600 471 719 2.66e-17 86.3
MsG0180004774.01.T01 AT4G14070 25.203 246 160 6 96 328 116 350 7.63e-11 65.9
MsG0180004774.01.T01 AT1G51680 30.449 312 168 12 253 520 203 509 3.19e-17 85.5
MsG0180004774.01.T01 AT1G20560 26.667 315 170 11 232 497 89 391 8.75e-17 84.0
MsG0180004774.01.T01 AT1G51680 30.928 291 155 11 253 502 203 488 9.89e-17 84.0
MsG0180004774.01.T01 AT1G77240 24.342 456 271 14 108 508 41 477 3.71e-16 82.4
MsG0180004774.01.T01 AT5G38120 27.376 263 140 11 253 475 200 451 4.56e-11 66.2
MsG0180004774.01.T01 AT5G38120 27.376 263 140 11 253 475 200 451 6.12e-11 65.5
MsG0180004774.01.T01 AT5G38120 27.376 263 140 11 253 475 200 451 6.35e-11 65.5
MsG0180004774.01.T01 AT5G38120 27.376 263 140 11 253 475 200 451 6.35e-11 65.5

Find 126 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTTAAGATTTGGGTATA+TGG 0.208667 1:+82596595 MsG0180004774.01.T01:intron
CTAAGTTTCAATTTCAATAT+TGG 0.242386 1:+82591037 MsG0180004774.01.T01:CDS
ACGAATTGATTCCATGTATA+TGG 0.245820 1:-82591200 None:intergenic
AATTTATTTCACTGTTTATA+AGG 0.250750 1:+82589801 MsG0180004774.01.T01:CDS
ATACTTACATCTTCAACTAT+TGG 0.314643 1:-82596481 None:intergenic
TTGGTCAAGCGAACATAGTT+TGG 0.320137 1:-82596713 None:intergenic
ATTACCTTTCAATCTCTTAG+AGG 0.321844 1:-82591011 None:intergenic
AGACCCGCTTCCATTTGATA+TGG 0.328595 1:+82597361 MsG0180004774.01.T01:CDS
GTGGAACCATCCATCTATTA+TGG 0.334919 1:-82596230 None:intergenic
TTCTTCAATCTCAGAGCTTA+AGG 0.341131 1:-82595668 None:intergenic
TGTGTTAAAACAACACCTTT+AGG 0.342951 1:-82591940 None:intergenic
TATTTAAGATTTGGGTATAT+GGG 0.344059 1:+82596596 MsG0180004774.01.T01:intron
CCACCTCTTAACATTGTATT+CGG 0.356464 1:-82589080 None:intergenic
CAACATGATCAAGTATTATA+AGG 0.357038 1:+82597424 MsG0180004774.01.T01:CDS
GTCAAGTATTTGTCCTCCTT+TGG 0.368480 1:+82591870 MsG0180004774.01.T01:CDS
TCCTGATTTCACCTCTGCTT+GGG 0.376030 1:+82589766 MsG0180004774.01.T01:CDS
TTATTAGCAACATCTTCATT+TGG 0.377802 1:-82596655 None:intergenic
ATGAAGATGTTGCTAATAAG+TGG 0.378171 1:+82596659 MsG0180004774.01.T01:CDS
TTGTATGTCTTCCAAACATA+TGG 0.379295 1:-82590078 None:intergenic
CATAGATAGGACCATATGTT+TGG 0.379474 1:+82590067 MsG0180004774.01.T01:intron
CCTAGCATGCACATTTCATC+TGG 0.398573 1:-82596049 None:intergenic
GAGAGAAGGTTACGGTAAAC+AGG 0.400121 1:-82589719 None:intergenic
ACAAAAGAAGCCATAATAGA+TGG 0.412059 1:+82596220 MsG0180004774.01.T01:CDS
ATCCTGATTTCACCTCTGCT+TGG 0.423007 1:+82589765 MsG0180004774.01.T01:CDS
AAAGAGACAACATCTTAGTA+AGG 0.424931 1:-82597470 None:intergenic
GAATCCTACAGTGTAATTCT+TGG 0.432785 1:-82589056 None:intergenic
ATAATCCTCATAATACCATT+AGG 0.434153 1:-82596376 None:intergenic
TGCTTCCTAATGGTATTATG+AGG 0.438775 1:+82596371 MsG0180004774.01.T01:CDS
TGGTTTAATTCCAGCGTTTG+TGG 0.443623 1:-82591180 None:intergenic
TCCCAAGCAGAGGTGAAATC+AGG 0.444690 1:-82589767 None:intergenic
ATAGCACATATCTCTTCAAT+TGG 0.447684 1:-82596732 None:intergenic
CGTGTTAGACTAATAATATC+TGG 0.450794 1:+82595637 MsG0180004774.01.T01:CDS
ATGGAATCAATTCGTACAAA+AGG 0.460579 1:+82591208 MsG0180004774.01.T01:CDS
CGATCAAGGATGTGAGCTAA+AGG 0.462061 1:-82592164 None:intergenic
TTTCCGTAACGGTGCATCCG+TGG 0.462706 1:+82592205 MsG0180004774.01.T01:CDS
TCAAGATAAGAAGGTTAAAG+AGG 0.465855 1:+82590824 MsG0180004774.01.T01:CDS
CATCCGTGGGTTACTATCAC+GGG 0.468782 1:+82592219 MsG0180004774.01.T01:CDS
TCTGGAAATGTAAGAGTAGT+TGG 0.472023 1:-82596031 None:intergenic
AAGTCTCTTTCCATATCAAA+TGG 0.472138 1:-82597371 None:intergenic
AGAGGATTGTAACCCATGTC+TGG 0.475731 1:-82596121 None:intergenic
TTCCGTAACGGTGCATCCGT+GGG 0.476822 1:+82592206 MsG0180004774.01.T01:CDS
CATGGAACAATTTGAGGACA+AGG 0.478090 1:+82592002 MsG0180004774.01.T01:CDS
GAATAGCTTCAAGTCAATAC+TGG 0.479819 1:+82596618 MsG0180004774.01.T01:CDS
AAAGATGAGGCCACAAACGC+TGG 0.481975 1:+82591170 MsG0180004774.01.T01:CDS
ATTGGAGAAATGCTTCCTAA+TGG 0.484911 1:+82596361 MsG0180004774.01.T01:CDS
CCAGATGAAATGTGCATGCT+AGG 0.486775 1:+82596049 MsG0180004774.01.T01:CDS
ACATCCTCAAAACCGCATGC+TGG 0.486879 1:+82589901 MsG0180004774.01.T01:CDS
CATCCTCAAAACCGCATGCT+GGG 0.489805 1:+82589902 MsG0180004774.01.T01:CDS
GGATGGCGTAAAATTGTTGA+TGG 0.493101 1:+82589923 MsG0180004774.01.T01:CDS
AACCCACGGATGCACCGTTA+CGG 0.493528 1:-82592208 None:intergenic
CTCAAAACCGCATGCTGGGA+TGG 0.496069 1:+82589906 MsG0180004774.01.T01:CDS
AATCTTGTTAAGCTTTCTCA+AGG 0.500570 1:+82596412 MsG0180004774.01.T01:CDS
TAATGAAGTGAAGCCCACTA+TGG 0.502558 1:-82591135 None:intergenic
ATTCTTCAATACAACGATCA+AGG 0.508652 1:-82592178 None:intergenic
AATTAAGGTTGAGGAAGGAA+AGG 0.508909 1:+82589667 MsG0180004774.01.T01:CDS
AAGGTTGAGGAAGGAAAGGA+AGG 0.508962 1:+82589671 MsG0180004774.01.T01:CDS
AACGTACTAGCTTTAGTAAG+AGG 0.510169 1:+82591967 MsG0180004774.01.T01:CDS
GCGTAAAATTGTTGATGGAA+AGG 0.513370 1:+82589928 MsG0180004774.01.T01:CDS
CAAGGTCCTTACCATAGCCT+TGG 0.521183 1:-82595723 None:intergenic
GACATGGGTTACAATCCTCT+TGG 0.525689 1:+82596124 MsG0180004774.01.T01:CDS
GTATTATGAGGATTATTGAC+AGG 0.526644 1:+82596383 MsG0180004774.01.T01:CDS
CCTCTATGAAATTAGTTGAA+GGG 0.527464 1:+82597311 MsG0180004774.01.T01:intron
CTGGAATTAAACCATATACA+TGG 0.532708 1:+82591189 MsG0180004774.01.T01:CDS
AATAAGTGGGCATATGCAAA+TGG 0.534338 1:+82596673 MsG0180004774.01.T01:CDS
GTATATATCCTAGGGGACAT+TGG 0.534838 1:+82596343 MsG0180004774.01.T01:intron
AAGGAGGACAAATACTTGAC+GGG 0.536225 1:-82591867 None:intergenic
TGTATTCAATGAATTGCGGC+TGG 0.537145 1:+82596090 MsG0180004774.01.T01:CDS
GATCAAGGATGTGAGCTAAA+GGG 0.537448 1:-82592163 None:intergenic
GAGGTGAAATCAGGATCCAT+TGG 0.538563 1:-82589758 None:intergenic
TCTCCGAATACAATGTTAAG+AGG 0.538812 1:+82589077 MsG0180004774.01.T01:CDS
ATTTGATATGGAAAGAGACT+TGG 0.545381 1:+82597373 MsG0180004774.01.T01:CDS
GCCTTTGTATGCCAAGGCTA+TGG 0.547652 1:+82595712 MsG0180004774.01.T01:CDS
GGCTACACTTACAGCCATAG+TGG 0.547898 1:+82591121 MsG0180004774.01.T01:intron
AAGGGATTTGAACATATCAA+AGG 0.551479 1:+82597329 MsG0180004774.01.T01:CDS
AAAGGAGGACAAATACTTGA+CGG 0.560929 1:-82591868 None:intergenic
TGCACAATAATGTATACAAG+TGG 0.561176 1:+82591904 MsG0180004774.01.T01:CDS
GCATCCGTGGGTTACTATCA+CGG 0.561373 1:+82592218 MsG0180004774.01.T01:CDS
TTTCCATATCAAATGGAAGC+GGG 0.571957 1:-82597364 None:intergenic
ATGTATACAAGTGGAACTAG+TGG 0.575171 1:+82591913 MsG0180004774.01.T01:CDS
AAGAGACAACATCTTAGTAA+GGG 0.577303 1:-82597469 None:intergenic
ACTTGTGCCTTTGTATGCCA+AGG 0.583881 1:+82595706 MsG0180004774.01.T01:CDS
CATTAGGTCAAAGCAAGGCT+AGG 0.588553 1:+82595610 MsG0180004774.01.T01:intron
GTGAAATCAGGATCCATTGG+AGG 0.590379 1:-82589755 None:intergenic
AAATCCTCTAAGAGATTGAA+AGG 0.590421 1:+82591007 MsG0180004774.01.T01:CDS
ACTAGCTTTAGTAAGAGGAA+TGG 0.591608 1:+82591972 MsG0180004774.01.T01:CDS
AAGCGAACATAGTTTGGAGA+AGG 0.595063 1:-82596707 None:intergenic
TGAAGATGTTGCTAATAAGT+GGG 0.599300 1:+82596660 MsG0180004774.01.T01:CDS
ACCATAGCCTTGGCATACAA+AGG 0.601421 1:-82595713 None:intergenic
AAGAAGCCATAATAGATGGA+TGG 0.604745 1:+82596224 MsG0180004774.01.T01:CDS
GATGTGAGCTAAAGGGAGGA+AGG 0.614011 1:-82592156 None:intergenic
GTGCATATGTCATGAGCCAA+AGG 0.615739 1:-82591886 None:intergenic
ATGTGCATGCTAGGCAATGT+TGG 0.618977 1:+82596058 MsG0180004774.01.T01:CDS
TTGCTTTGTGTAGATGACTG+TGG 0.621448 1:+82592118 MsG0180004774.01.T01:intron
GCTTCTGCTTTAAAAGCATG+TGG 0.622653 1:+82590129 MsG0180004774.01.T01:CDS
CTTTCCATATCAAATGGAAG+CGG 0.623939 1:-82597365 None:intergenic
CACACCATTAGGTCAAAGCA+AGG 0.630154 1:+82595605 MsG0180004774.01.T01:intron
ATCTACAGCTGTGAGAAACA+AGG 0.630405 1:+82596765 MsG0180004774.01.T01:CDS
GGAACTAGTGGAGATCCTAA+AGG 0.633228 1:+82591925 MsG0180004774.01.T01:CDS
TAACTGTATTCAATGAATTG+CGG 0.635370 1:+82596086 MsG0180004774.01.T01:CDS
GGGCTTCACTTCATTAACTG+AGG 0.642336 1:+82591142 MsG0180004774.01.T01:CDS
CTGACACATATCTCACCACA+TGG 0.645144 1:-82596154 None:intergenic
TGTGGTGCTAAATCTGTAAG+TGG 0.645898 1:+82590147 MsG0180004774.01.T01:CDS
AACTGAGGAAGAGAAAGATG+AGG 0.647032 1:+82591157 MsG0180004774.01.T01:CDS
GCTGGAGGAAGTTCCAGACA+TGG 0.647892 1:+82596108 MsG0180004774.01.T01:CDS
TGAAATCAGGATCCATTGGA+GGG 0.649258 1:-82589754 None:intergenic
ATGACCAAGAATTACACTGT+AGG 0.656425 1:+82589052 MsG0180004774.01.T01:CDS
TTACCAAGTGTGTCATAGAG+AGG 0.657682 1:-82590664 None:intergenic
ATATGTTTGGAAGACATACA+AGG 0.657772 1:+82590080 MsG0180004774.01.T01:CDS
GCTACACTTACAGCCATAGT+GGG 0.658633 1:+82591122 MsG0180004774.01.T01:intron
CTGGAGGAAGTTCCAGACAT+GGG 0.659695 1:+82596109 MsG0180004774.01.T01:CDS
ATTCAATGAATTGCGGCTGG+AGG 0.661838 1:+82596093 MsG0180004774.01.T01:CDS
CATATGTCATGAGCCAAAGG+AGG 0.664582 1:-82591883 None:intergenic
CCTGAAAATATCCCAAGCAG+AGG 0.666120 1:-82589777 None:intergenic
GTGCCTCTCTATGACACACT+TGG 0.668273 1:+82590661 MsG0180004774.01.T01:CDS
CCAGGTTTGACAGAAACATG+TGG 0.679060 1:+82596007 MsG0180004774.01.T01:intron
CAAGGATGTGAGCTAAAGGG+AGG 0.681394 1:-82592160 None:intergenic
GAAGAGAAAATCAACCTGTG+TGG 0.682894 1:-82596249 None:intergenic
TAGGTCAAAGCAAGGCTAGG+CGG 0.689698 1:+82595613 MsG0180004774.01.T01:intron
CCTCTTGGAACTCCTCCATG+TGG 0.694715 1:+82596139 MsG0180004774.01.T01:CDS
TACCCCGTGATAGTAACCCA+CGG 0.697826 1:-82592222 None:intergenic
ATAGATGGATGGTTCCACAC+AGG 0.705801 1:+82596235 MsG0180004774.01.T01:CDS
GTTAGACTAATAATATCTGG+AGG 0.707528 1:+82595640 MsG0180004774.01.T01:CDS
TGTGGTGAGATATGTGTCAG+AGG 0.711445 1:+82596157 MsG0180004774.01.T01:CDS
CCACATGGAGGAGTTCCAAG+AGG 0.716589 1:-82596139 None:intergenic
ATCCGTGGGTTACTATCACG+GGG 0.722483 1:+82592220 MsG0180004774.01.T01:CDS
ACACATATCTCACCACATGG+AGG 0.748292 1:-82596151 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATATAAATTTTTTAAAA+CGG + Chr1:82593051-82593070 MsG0180004774.01.T01:intron 0.0%
!! AAATCTATTAAAATTAAGTA+AGG - Chr1:82592405-82592424 None:intergenic 10.0%
!! ATATATTACGTAATAAAATA+TGG - Chr1:82593519-82593538 None:intergenic 10.0%
!! ATTAATAAATATTTGTATCA+AGG - Chr1:82590879-82590898 None:intergenic 10.0%
!! CCAAAAAAATAAAAATAAAT+TGG - Chr1:82592333-82592352 None:intergenic 10.0%
!! TATATTACGTAATAAAATAT+GGG - Chr1:82593518-82593537 None:intergenic 10.0%
!! TATGAATTAATTAAAGATTA+AGG - Chr1:82592031-82592050 None:intergenic 10.0%
!! TGTCAAAAAAAAAAAAATAT+AGG - Chr1:82595121-82595140 None:intergenic 10.0%
!! TTAGAGTTATAAATAAATAT+AGG - Chr1:82595154-82595173 None:intergenic 10.0%
!! TTATTTATAGTATAAAAAAG+AGG - Chr1:82589157-82589176 None:intergenic 10.0%
!! TTCAAAAATTTAAAAGTTTA+AGG - Chr1:82592953-82592972 None:intergenic 10.0%
!!! AAAATAATAGAAATATTTTG+AGG - Chr1:82596280-82596299 None:intergenic 10.0%
!!! AATTAATTAATTCTTTAGAA+TGG + Chr1:82589574-82589593 MsG0180004774.01.T01:intron 10.0%
!!! AATTTTTTTTTTTGTTTTGA+AGG + Chr1:82594904-82594923 MsG0180004774.01.T01:intron 10.0%
!!! ATGTTTTTTATTTAAGATTT+GGG + Chr1:82596588-82596607 MsG0180004774.01.T01:intron 10.0%
!!! ATTTATAACTCTAAAAAAAA+TGG + Chr1:82595160-82595179 MsG0180004774.01.T01:intron 10.0%
!!! CCAATTTATTTTTATTTTTT+TGG + Chr1:82592330-82592349 MsG0180004774.01.T01:intron 10.0%
!!! TATGTTTTTTATTTAAGATT+TGG + Chr1:82596587-82596606 MsG0180004774.01.T01:intron 10.0%
!!! TGAAATTTAATTAATTTTAG+AGG + Chr1:82595864-82595883 MsG0180004774.01.T01:intron 10.0%
!! AAAATAAATTGGTCAATAAA+TGG - Chr1:82592322-82592341 None:intergenic 15.0%
!! AAATAAATTGGTCAATAAAT+GGG - Chr1:82592321-82592340 None:intergenic 15.0%
!! AATTAATTTCAATTTGTCAT+TGG - Chr1:82592061-82592080 None:intergenic 15.0%
!! AATTTATTTCACTGTTTATA+AGG + Chr1:82589801-82589820 MsG0180004774.01.T01:CDS 15.0%
!! AGAACTATTAAAATTAAGTA+AGG + Chr1:82593274-82593293 MsG0180004774.01.T01:intron 15.0%
!! GAATTCTTTCAAAAAAAAAA+TGG + Chr1:82595184-82595203 MsG0180004774.01.T01:intron 15.0%
!! GGATACTAAAAAAAATTATA+TGG + Chr1:82593393-82593412 MsG0180004774.01.T01:intron 15.0%
!! TACAAATATATTTAACTCTT+AGG + Chr1:82597009-82597028 MsG0180004774.01.T01:intron 15.0%
!! TTAAATTGAAAGAACAATAA+AGG - Chr1:82593552-82593571 None:intergenic 15.0%
!!! AAAAAAATGGAGAATTATTT+TGG + Chr1:82595197-82595216 MsG0180004774.01.T01:intron 15.0%
!!! AAAAAATGGAGAATTATTTT+GGG + Chr1:82595198-82595217 MsG0180004774.01.T01:intron 15.0%
!!! AAAGAAAATTTTAATGTAAC+AGG - Chr1:82597125-82597144 None:intergenic 15.0%
!!! AATCATGTTGTTTATAATAT+TGG + Chr1:82590606-82590625 MsG0180004774.01.T01:intron 15.0%
!!! AATTAAACAAATTTGATTTG+AGG + Chr1:82593209-82593228 MsG0180004774.01.T01:intron 15.0%
!!! ACAAAATAGGATTTATTTTT+GGG - Chr1:82595414-82595433 None:intergenic 15.0%
!!! ATTGTTTTTTGTTTTGTATT+TGG + Chr1:82590036-82590055 MsG0180004774.01.T01:intron 15.0%
!!! ATTTTTGAACGATTTTTTTT+AGG + Chr1:82592964-82592983 MsG0180004774.01.T01:intron 15.0%
!!! CTATTTTTTCAGAATTTATT+TGG - Chr1:82594274-82594293 None:intergenic 15.0%
!!! GTTACATTAAAATTTTCTTT+AGG + Chr1:82597125-82597144 MsG0180004774.01.T01:intron 15.0%
!!! TAAAATGTCTCAATTTTATA+GGG + Chr1:82593305-82593324 MsG0180004774.01.T01:intron 15.0%
!!! TAAAATTTCCCAATTTTATA+GGG - Chr1:82592374-82592393 None:intergenic 15.0%
!!! TATAAAATTACGTTTAAAGT+TGG + Chr1:82593647-82593666 MsG0180004774.01.T01:intron 15.0%
!!! TATTTCTATTATTTTCTTCT+TGG + Chr1:82596285-82596304 MsG0180004774.01.T01:intron 15.0%
!!! TCTTTTTTATATTAGCTATT+TGG + Chr1:82591294-82591313 MsG0180004774.01.T01:intron 15.0%
!!! TTAAAATGTCTCAATTTTAT+AGG + Chr1:82593304-82593323 MsG0180004774.01.T01:intron 15.0%
!!! TTAAAATTTCCCAATTTTAT+AGG - Chr1:82592375-82592394 None:intergenic 15.0%
!!! TTCACAAAATGTTTTTTTTA+AGG - Chr1:82593872-82593891 None:intergenic 15.0%
!!! TTTTTTTTTATGAGTTTGTT+TGG + Chr1:82595368-82595387 MsG0180004774.01.T01:intron 15.0%
!! AATTGAACAAAATTTATGCA+TGG - Chr1:82596856-82596875 None:intergenic 20.0%
!! AGTCATTAAAAATGTATTAG+AGG + Chr1:82595812-82595831 MsG0180004774.01.T01:intron 20.0%
!! AGTTAACATCTTGTAATTTA+TGG + Chr1:82594757-82594776 MsG0180004774.01.T01:intron 20.0%
!! ATTGAACAAAATTTATGCAT+GGG - Chr1:82596855-82596874 None:intergenic 20.0%
!! ATTTAGTAAGCAACAATAAA+TGG + Chr1:82589543-82589562 MsG0180004774.01.T01:intron 20.0%
!! CAAAGTGTACAAATAAATAT+GGG + Chr1:82594354-82594373 MsG0180004774.01.T01:intron 20.0%
!! CATAAAAAATAGGGTTAAAT+AGG - Chr1:82593339-82593358 None:intergenic 20.0%
!! CATGTAAACTATATGAAAAA+TGG - Chr1:82592087-82592106 None:intergenic 20.0%
!! CTAACACTATAATACTTATT+CGG + Chr1:82594727-82594746 MsG0180004774.01.T01:intron 20.0%
!! CTAAGTTTCAATTTCAATAT+TGG + Chr1:82591037-82591056 MsG0180004774.01.T01:CDS 20.0%
!! TACTATAATGTAAATAGACA+TGG - Chr1:82590384-82590403 None:intergenic 20.0%
!! TACTGTATAAAACACAAAAT+AGG - Chr1:82595427-82595446 None:intergenic 20.0%
!! TATATATAGATTAATATCCC+TGG - Chr1:82594631-82594650 None:intergenic 20.0%
!! TATTATAGTGTTAGTTAGTT+AGG - Chr1:82594721-82594740 None:intergenic 20.0%
!! TCAAAGTGTACAAATAAATA+TGG + Chr1:82594353-82594372 MsG0180004774.01.T01:intron 20.0%
!! TGTAAAAGAAATATCTAATG+TGG + Chr1:82593696-82593715 MsG0180004774.01.T01:intron 20.0%
!! TTATGTATGTTATCTAAGTT+TGG + Chr1:82591087-82591106 MsG0180004774.01.T01:intron 20.0%
!! TTGTTACATTAGGTATTAAT+GGG - Chr1:82595303-82595322 None:intergenic 20.0%
!! TTTGTTACATTAGGTATTAA+TGG - Chr1:82595304-82595323 None:intergenic 20.0%
!!! AAAAAGTACATGTATGTATT+TGG - Chr1:82595951-82595970 None:intergenic 20.0%
!!! AAGTCAAAAAAGTTTCTTTT+TGG + Chr1:82593453-82593472 MsG0180004774.01.T01:intron 20.0%
!!! AATTTCTTCTCTTTAACTTA+TGG + Chr1:82590711-82590730 MsG0180004774.01.T01:intron 20.0%
!!! AGCATTTTGCATAAAAAATA+GGG - Chr1:82593348-82593367 None:intergenic 20.0%
!!! AGTCATTATTTTGTTTTTGA+AGG + Chr1:82596878-82596897 MsG0180004774.01.T01:intron 20.0%
!!! ATTATTGATGGTCTTATATA+GGG + Chr1:82590447-82590466 MsG0180004774.01.T01:intron 20.0%
!!! CAAAATAGGATTTATTTTTG+GGG - Chr1:82595413-82595432 None:intergenic 20.0%
!!! CACAAAATAGGATTTATTTT+TGG - Chr1:82595415-82595434 None:intergenic 20.0%
!!! CATTTTGTAACTTCTAAATA+TGG - Chr1:82594202-82594221 None:intergenic 20.0%
!!! GACTTTTTTTTTTTTAGAGA+CGG - Chr1:82589496-82589515 None:intergenic 20.0%
!!! GTTTTTGAAAAAGTTTATGA+AGG + Chr1:82594862-82594881 MsG0180004774.01.T01:intron 20.0%
!!! TAGCATTTTGCATAAAAAAT+AGG - Chr1:82593349-82593368 None:intergenic 20.0%
!!! TATTATTGATGGTCTTATAT+AGG + Chr1:82590446-82590465 MsG0180004774.01.T01:intron 20.0%
!!! TATTTAAGATTTGGGTATAT+GGG + Chr1:82596596-82596615 MsG0180004774.01.T01:intron 20.0%
!!! TCGTTTATATTTGTTACATT+AGG - Chr1:82595313-82595332 None:intergenic 20.0%
!!! TCTAATGTGGTAATTATTTT+TGG + Chr1:82593709-82593728 MsG0180004774.01.T01:intron 20.0%
!!! TTATTTAAGATTTGGGTATA+TGG + Chr1:82596595-82596614 MsG0180004774.01.T01:intron 20.0%
!!! TTTTTAGTGTTATGTAACTT+AGG + Chr1:82589981-82590000 MsG0180004774.01.T01:intron 20.0%
!!! TTTTTGATCCCTATAAAATT+GGG + Chr1:82592363-82592382 MsG0180004774.01.T01:intron 20.0%
! AATCACACAACTAAAAAATG+TGG + Chr1:82594295-82594314 MsG0180004774.01.T01:intron 25.0%
! ACATCTTGTAATTTATGGAA+TGG + Chr1:82594762-82594781 MsG0180004774.01.T01:intron 25.0%
! ATAAAATAATCCAACCTGAA+AGG + Chr1:82591329-82591348 MsG0180004774.01.T01:intron 25.0%
! ATAATCCTCATAATACCATT+AGG - Chr1:82596379-82596398 None:intergenic 25.0%
! ATACTTACATCTTCAACTAT+TGG - Chr1:82596484-82596503 None:intergenic 25.0%
! ATGACCATTTGATTAAGATA+AGG - Chr1:82590332-82590351 None:intergenic 25.0%
! ATTGAAAAAATGTAGTCACA+CGG - Chr1:82594172-82594191 None:intergenic 25.0%
! ATTGTTTGGTATATATCCTA+GGG + Chr1:82596335-82596354 MsG0180004774.01.T01:intron 25.0%
! ATTTCACTGTTTATAAGGTT+TGG + Chr1:82589806-82589825 MsG0180004774.01.T01:intron 25.0%
! CAACATGATCAAGTATTATA+AGG + Chr1:82597424-82597443 MsG0180004774.01.T01:CDS 25.0%
! CAGAAATATACTCAATATAG+TGG - Chr1:82597080-82597099 None:intergenic 25.0%
! CTTATATAGGGTTCAAAAAT+TGG + Chr1:82590459-82590478 MsG0180004774.01.T01:intron 25.0%
! GAAACATTATAATGCATGTT+TGG - Chr1:82591791-82591810 None:intergenic 25.0%
! GGTTCAAAAATTGGAATTTA+TGG + Chr1:82590468-82590487 MsG0180004774.01.T01:intron 25.0%
! GTTGTTTATAATATTGGCAT+AGG + Chr1:82590612-82590631 MsG0180004774.01.T01:intron 25.0%
! TAAAACACGAATACGAAATT+TGG - Chr1:82590290-82590309 None:intergenic 25.0%
! TAACTGTATTCAATGAATTG+CGG + Chr1:82596086-82596105 MsG0180004774.01.T01:CDS 25.0%
! TAGAGACTAAAATTTCTACA+GGG + Chr1:82596959-82596978 MsG0180004774.01.T01:intron 25.0%
! TCTTAGAATTTACTTTGTAC+TGG + Chr1:82591744-82591763 MsG0180004774.01.T01:intron 25.0%
! TTATTAGCAACATCTTCATT+TGG - Chr1:82596658-82596677 None:intergenic 25.0%
! TTCTCAATGTCTATTATTGA+TGG + Chr1:82590435-82590454 MsG0180004774.01.T01:intron 25.0%
!! AATAGGGTTAAATAGGTTTT+TGG - Chr1:82593332-82593351 None:intergenic 25.0%
!! AATGAAGAGCTTTTCAATTA+AGG + Chr1:82589652-82589671 MsG0180004774.01.T01:CDS 25.0%
!! ATACATTTTTAATGACTCGA+TGG - Chr1:82595809-82595828 None:intergenic 25.0%
!! GTTTTTGATCCCTATAAAAT+TGG + Chr1:82592362-82592381 MsG0180004774.01.T01:intron 25.0%
!! TGTGTTTTATACAGTAAACT+TGG + Chr1:82595431-82595450 MsG0180004774.01.T01:intron 25.0%
!! TTGTTAACTCAGGATTTTTA+TGG - Chr1:82596204-82596223 None:intergenic 25.0%
!! TTTGGTTTATGTTCATAGAT+AGG + Chr1:82590054-82590073 MsG0180004774.01.T01:intron 25.0%
!! TTTTTATGCAAAATGCTAAC+CGG + Chr1:82593351-82593370 MsG0180004774.01.T01:intron 25.0%
!!! AAACAAATTTGATTTGAGGA+GGG + Chr1:82593213-82593232 MsG0180004774.01.T01:intron 25.0%
!!! AAACATTTTCAAGATACTCA+AGG - Chr1:82596450-82596469 None:intergenic 25.0%
!!! AAAGTAAATTCTAAGATCTC+CGG - Chr1:82591740-82591759 None:intergenic 25.0%
!!! AACATTTTCAAGATACTCAA+GGG - Chr1:82596449-82596468 None:intergenic 25.0%
!!! CTTTAATTTTGTCAAACTCA+CGG - Chr1:82591609-82591628 None:intergenic 25.0%
!!! GAAGAATATTTTTTCCGTAA+CGG + Chr1:82592194-82592213 MsG0180004774.01.T01:CDS 25.0%
!!! GAGTGCAGAATTTTTTTTTA+TGG + Chr1:82593245-82593264 MsG0180004774.01.T01:intron 25.0%
!!! TAAACAAATTTGATTTGAGG+AGG + Chr1:82593212-82593231 MsG0180004774.01.T01:intron 25.0%
!!! TAATAGAAATATTTTGAGGC+AGG - Chr1:82596276-82596295 None:intergenic 25.0%
!!! TGTTTTTGTTCAAGATAAGA+AGG + Chr1:82590815-82590834 MsG0180004774.01.T01:CDS 25.0%
!!! TTCAATCAATTTTTTGTTGC+AGG + Chr1:82595010-82595029 MsG0180004774.01.T01:intron 25.0%
!!! TTTAATTTTGTCAAACTCAC+GGG - Chr1:82591608-82591627 None:intergenic 25.0%
AAACAAACTTCGTTGTAACA+GGG - Chr1:82592924-82592943 None:intergenic 30.0%
AAAGAAGTCTTTCTTGAGAA+TGG + Chr1:82594025-82594044 MsG0180004774.01.T01:intron 30.0%
AACTTGCATGATTTGATTGA+AGG - Chr1:82591556-82591575 None:intergenic 30.0%
AAGGGATTTGAACATATCAA+AGG + Chr1:82597329-82597348 MsG0180004774.01.T01:CDS 30.0%
AAGTCTCTTTCCATATCAAA+TGG - Chr1:82597374-82597393 None:intergenic 30.0%
AATACGAAACAATCCTTACA+GGG + Chr1:82591835-82591854 MsG0180004774.01.T01:intron 30.0%
AATCAATTCGTACAAAAGGT+AGG + Chr1:82591212-82591231 MsG0180004774.01.T01:intron 30.0%
AATCTTGTTAAGCTTTCTCA+AGG + Chr1:82596412-82596431 MsG0180004774.01.T01:CDS 30.0%
ACAAAAGAAGCCATAATAGA+TGG + Chr1:82596220-82596239 MsG0180004774.01.T01:CDS 30.0%
ACAATGATACACTGACATTA+AGG + Chr1:82595976-82595995 MsG0180004774.01.T01:intron 30.0%
AGACATTGAGAAGATTTCAT+TGG - Chr1:82590427-82590446 None:intergenic 30.0%
AGTACTTGTAGAAAGATAGA+CGG + Chr1:82592287-82592306 MsG0180004774.01.T01:intron 30.0%
ATAGCACATATCTCTTCAAT+TGG - Chr1:82596735-82596754 None:intergenic 30.0%
ATATGTTTGGAAGACATACA+AGG + Chr1:82590080-82590099 MsG0180004774.01.T01:CDS 30.0%
ATCATTTCATCAATAGTGCA+TGG - Chr1:82597198-82597217 None:intergenic 30.0%
ATGAAGATGTTGCTAATAAG+TGG + Chr1:82596659-82596678 MsG0180004774.01.T01:CDS 30.0%
ATGCGATCAATGATGTTTAA+GGG + Chr1:82591454-82591473 MsG0180004774.01.T01:intron 30.0%
ATGGAATCAATTCGTACAAA+AGG + Chr1:82591208-82591227 MsG0180004774.01.T01:CDS 30.0%
ATTACCTTTCAATCTCTTAG+AGG - Chr1:82591014-82591033 None:intergenic 30.0%
ATTCTTCAATACAACGATCA+AGG - Chr1:82592181-82592200 None:intergenic 30.0%
ATTGTTCAATCAAGATCAGA+CGG + Chr1:82590263-82590282 MsG0180004774.01.T01:intron 30.0%
ATTTGATATGGAAAGAGACT+TGG + Chr1:82597373-82597392 MsG0180004774.01.T01:CDS 30.0%
CAAATTTGTACTACCAAGTT+TGG + Chr1:82597247-82597266 MsG0180004774.01.T01:intron 30.0%
CATTGTTTGGTATATATCCT+AGG + Chr1:82596334-82596353 MsG0180004774.01.T01:intron 30.0%
CCAAATACGTAAGGAATAAA+GGG - Chr1:82594573-82594592 None:intergenic 30.0%
CCATTTGATTAAGATAAGGA+CGG - Chr1:82590328-82590347 None:intergenic 30.0%
CCTCTATGAAATTAGTTGAA+GGG + Chr1:82597311-82597330 MsG0180004774.01.T01:intron 30.0%
CGTGTTAGACTAATAATATC+TGG + Chr1:82595637-82595656 MsG0180004774.01.T01:CDS 30.0%
CTGCAACATTGAAAAAGAAA+AGG + Chr1:82597399-82597418 MsG0180004774.01.T01:CDS 30.0%
CTGGAATTAAACCATATACA+TGG + Chr1:82591189-82591208 MsG0180004774.01.T01:CDS 30.0%
GACATTAAGGTTAATATTCC+AGG + Chr1:82595989-82596008 MsG0180004774.01.T01:intron 30.0%
GTAGAGACTAAAATTTCTAC+AGG + Chr1:82596958-82596977 MsG0180004774.01.T01:intron 30.0%
GTATTATGAGGATTATTGAC+AGG + Chr1:82596383-82596402 MsG0180004774.01.T01:CDS 30.0%
GTTAGACTAATAATATCTGG+AGG + Chr1:82595640-82595659 MsG0180004774.01.T01:CDS 30.0%
TAAACAAACTTCGTTGTAAC+AGG - Chr1:82592925-82592944 None:intergenic 30.0%
TAATACGAAACAATCCTTAC+AGG + Chr1:82591834-82591853 MsG0180004774.01.T01:intron 30.0%
TAATCAAATGGTCATCAATG+TGG + Chr1:82590337-82590356 MsG0180004774.01.T01:intron 30.0%
TAGAGGCAGAAAAAATGAAA+AGG - Chr1:82597297-82597316 None:intergenic 30.0%
TATGCGATCAATGATGTTTA+AGG + Chr1:82591453-82591472 MsG0180004774.01.T01:intron 30.0%
TATTCCCTCTGAACTTAATT+TGG + Chr1:82595924-82595943 MsG0180004774.01.T01:intron 30.0%
TCAAGATAAGAAGGTTAAAG+AGG + Chr1:82590824-82590843 MsG0180004774.01.T01:CDS 30.0%
TCATTGATCGCATAAATTTC+AGG - Chr1:82591447-82591466 None:intergenic 30.0%
TGAAAAAGTTTATGAAGGCA+AGG + Chr1:82594867-82594886 MsG0180004774.01.T01:intron 30.0%
TGAAGATGTTGCTAATAAGT+GGG + Chr1:82596660-82596679 MsG0180004774.01.T01:CDS 30.0%
TGATTGAACAATTATCAGTG+TGG - Chr1:82590255-82590274 None:intergenic 30.0%
TGCACAATAATGTATACAAG+TGG + Chr1:82591904-82591923 MsG0180004774.01.T01:CDS 30.0%
TGTGTTAAAACAACACCTTT+AGG - Chr1:82591943-82591962 None:intergenic 30.0%
TTAGAGATTCATACCAAACT+TGG - Chr1:82597263-82597282 None:intergenic 30.0%
TTGTATGTCTTCCAAACATA+TGG - Chr1:82590081-82590100 None:intergenic 30.0%
TTGTTTGGTATATATCCTAG+GGG + Chr1:82596336-82596355 MsG0180004774.01.T01:intron 30.0%
TTTCTGTATCTAGTGTTATG+TGG + Chr1:82597094-82597113 MsG0180004774.01.T01:intron 30.0%
! AAATCCTCTAAGAGATTGAA+AGG + Chr1:82591007-82591026 MsG0180004774.01.T01:CDS 30.0%
! ACGAATTGATTCCATGTATA+TGG - Chr1:82591203-82591222 None:intergenic 30.0%
! AGGTAGGTGTATGTTATTTA+AGG + Chr1:82591228-82591247 MsG0180004774.01.T01:intron 30.0%
! CTGCAGACAATATATGTTTT+TGG - Chr1:82590969-82590988 None:intergenic 30.0%
! GGACATTTCTTCTTTTGATA+AGG - Chr1:82591770-82591789 None:intergenic 30.0%
! TCTTTTCATGGAACAATTTG+AGG + Chr1:82591996-82592015 MsG0180004774.01.T01:CDS 30.0%
! TTTAACTTAATGATGCTAGC+TGG - Chr1:82589472-82589491 None:intergenic 30.0%
! TTTTATACAGTAAACTTGGC+TGG + Chr1:82595435-82595454 MsG0180004774.01.T01:intron 30.0%
! TTTTCAATTAAGGTTGAGGA+AGG + Chr1:82589662-82589681 MsG0180004774.01.T01:CDS 30.0%
!! AAGTAAATTCTAAGATCTCC+GGG - Chr1:82591739-82591758 None:intergenic 30.0%
!!! CAATTTTTGAGATAGTTCCA+AGG - Chr1:82595744-82595763 None:intergenic 30.0%
!!! TAAACTTTTTCAAAAACCCG+TGG - Chr1:82594859-82594878 None:intergenic 30.0%
!!! TTTTTGAAGGCATTAAATGC+AGG + Chr1:82596891-82596910 MsG0180004774.01.T01:intron 30.0%
AAAAATGGCATGCTTTCTGT+TGG + Chr1:82589695-82589714 MsG0180004774.01.T01:CDS 35.0%
AAAGGAGGACAAATACTTGA+CGG - Chr1:82591871-82591890 None:intergenic 35.0%
AAAGTTACACTCCCTTATTG+TGG - Chr1:82591502-82591521 None:intergenic 35.0%
AAATGCCTTCAATTGTTAGC+TGG - Chr1:82591069-82591088 None:intergenic 35.0%
AAGAAGCCATAATAGATGGA+TGG + Chr1:82596224-82596243 MsG0180004774.01.T01:CDS 35.0%
AATAAGTGGGCATATGCAAA+TGG + Chr1:82596673-82596692 MsG0180004774.01.T01:CDS 35.0%
AATTAAGGTTGAGGAAGGAA+AGG + Chr1:82589667-82589686 MsG0180004774.01.T01:CDS 35.0%
ACTCTATTAGTTAGTGTAGC+TGG - Chr1:82594663-82594682 None:intergenic 35.0%
ATAGATTAATATCCCTGGAC+CGG - Chr1:82594626-82594645 None:intergenic 35.0%
ATGACCAAGAATTACACTGT+AGG + Chr1:82589052-82589071 MsG0180004774.01.T01:CDS 35.0%
ATGTATACAAGTGGAACTAG+TGG + Chr1:82591913-82591932 MsG0180004774.01.T01:CDS 35.0%
ATTGGAGAAATGCTTCCTAA+TGG + Chr1:82596361-82596380 MsG0180004774.01.T01:CDS 35.0%
CAAAAATGAATTCCCTCCAA+TGG + Chr1:82589742-82589761 MsG0180004774.01.T01:CDS 35.0%
CATAGATAGGACCATATGTT+TGG + Chr1:82590067-82590086 MsG0180004774.01.T01:intron 35.0%
CCACCTCTTAACATTGTATT+CGG - Chr1:82589083-82589102 None:intergenic 35.0%
CCCTTCAACTAATTTCATAG+AGG - Chr1:82597314-82597333 None:intergenic 35.0%
CCCTTTATTCCTTACGTATT+TGG + Chr1:82594570-82594589 MsG0180004774.01.T01:intron 35.0%
CCGTCCTTATCTTAATCAAA+TGG + Chr1:82590325-82590344 MsG0180004774.01.T01:intron 35.0%
CTAAGTTTGGTTGTTGTATG+TGG + Chr1:82591100-82591119 MsG0180004774.01.T01:intron 35.0%
CTACACACACAGTATTTAAG+TGG - Chr1:82593739-82593758 None:intergenic 35.0%
CTTTCCATATCAAATGGAAG+CGG - Chr1:82597368-82597387 None:intergenic 35.0%
GAAGGAAAGGAAGGAAAAAA+TGG + Chr1:82589680-82589699 MsG0180004774.01.T01:CDS 35.0%
GAATAGCTTCAAGTCAATAC+TGG + Chr1:82596618-82596637 MsG0180004774.01.T01:CDS 35.0%
GAATCCTACAGTGTAATTCT+TGG - Chr1:82589059-82589078 None:intergenic 35.0%
GCCAAATACGTAAGGAATAA+AGG - Chr1:82594574-82594593 None:intergenic 35.0%
GCCTCTATGAAATTAGTTGA+AGG + Chr1:82597310-82597329 MsG0180004774.01.T01:intron 35.0%
GGAATCTTGATCCACAATAA+GGG + Chr1:82591488-82591507 MsG0180004774.01.T01:intron 35.0%
GTCTACAATTGAGATTTCTC+TGG + Chr1:82591375-82591394 MsG0180004774.01.T01:intron 35.0%
TAAATATGGGTGTCAACATG+TGG + Chr1:82594367-82594386 MsG0180004774.01.T01:intron 35.0%
TAGATACAAAATAGGGACAG+AGG + Chr1:82594056-82594075 MsG0180004774.01.T01:intron 35.0%
TCTCCGAATACAATGTTAAG+AGG + Chr1:82589077-82589096 MsG0180004774.01.T01:CDS 35.0%
TCTGGAAATGTAAGAGTAGT+TGG - Chr1:82596034-82596053 None:intergenic 35.0%
TGAAGAGTCATGAGATGATA+AGG + Chr1:82593888-82593907 MsG0180004774.01.T01:intron 35.0%
TGAGAAACAAGGTAACACAT+AGG + Chr1:82596776-82596795 MsG0180004774.01.T01:intron 35.0%
TGCTTCCTAATGGTATTATG+AGG + Chr1:82596371-82596390 MsG0180004774.01.T01:CDS 35.0%
TGGTCCAAATTAAGTTCAGA+GGG - Chr1:82595931-82595950 None:intergenic 35.0%
TTAAAGCCAACATTGTTTGC+TGG + Chr1:82594829-82594848 MsG0180004774.01.T01:intron 35.0%
TTACTAGTACATGCAAGAGA+AGG - Chr1:82595552-82595571 None:intergenic 35.0%
TTCTTCAATCTCAGAGCTTA+AGG - Chr1:82595671-82595690 None:intergenic 35.0%
TTGGTCCAAATTAAGTTCAG+AGG - Chr1:82595932-82595951 None:intergenic 35.0%
TTTCCATATCAAATGGAAGC+GGG - Chr1:82597367-82597386 None:intergenic 35.0%
TTTGACCTAATGGTGTGTAA+AGG - Chr1:82595602-82595621 None:intergenic 35.0%
! AAGAGGAATGGATCTTTTCA+TGG + Chr1:82591984-82592003 MsG0180004774.01.T01:CDS 35.0%
! AAGAGGTGTAGTTGTAAATG+TGG - Chr1:82589140-82589159 None:intergenic 35.0%
! AAGCATTGTGACATTGTGAT+TGG + Chr1:82594503-82594522 MsG0180004774.01.T01:intron 35.0%
! AAGCATTGTGACATTGTGAT+TGG - Chr1:82594522-82594503 None:intergenic 35.0%
! ATGCACTCCATTAGTCTATT+TGG + Chr1:82591670-82591689 MsG0180004774.01.T01:intron 35.0%
! ATGGCTTCTTTTGTTAACTC+AGG - Chr1:82596214-82596233 None:intergenic 35.0%
! CATTGGAGGGAATTCATTTT+TGG - Chr1:82589744-82589763 None:intergenic 35.0%
! GAGCTTTTCAATTAAGGTTG+AGG + Chr1:82589658-82589677 MsG0180004774.01.T01:CDS 35.0%
! GATTGTGTTGTGTCATTGTT+TGG + Chr1:82596321-82596340 MsG0180004774.01.T01:intron 35.0%
! GCGTAAAATTGTTGATGGAA+AGG + Chr1:82589928-82589947 MsG0180004774.01.T01:CDS 35.0%
! TGATTAAGTGCTTTTGATGC+AGG + Chr1:82590747-82590766 MsG0180004774.01.T01:intron 35.0%
! TTATGGAATGGTTTGCATGA+AGG + Chr1:82594774-82594793 MsG0180004774.01.T01:intron 35.0%
!! AACGTACTAGCTTTAGTAAG+AGG + Chr1:82591967-82591986 MsG0180004774.01.T01:CDS 35.0%
!! ACTAGCTTTAGTAAGAGGAA+TGG + Chr1:82591972-82591991 MsG0180004774.01.T01:CDS 35.0%
!! CATTTTTGGAGAGAAGGTTA+CGG - Chr1:82589730-82589749 None:intergenic 35.0%
!! GGAATTCATTTTTGGAGAGA+AGG - Chr1:82589736-82589755 None:intergenic 35.0%
!! TCACTCTTGTCCTTTTTAGT+TGG + Chr1:82595782-82595801 MsG0180004774.01.T01:intron 35.0%
!! TGCATCAAAAGCACTTAATC+AGG - Chr1:82590748-82590767 None:intergenic 35.0%
!!! ATGTTTTGGCCAAATACGTA+AGG - Chr1:82594582-82594601 None:intergenic 35.0%
AAACTTGGCTGGATGAACAA+AGG + Chr1:82595446-82595465 MsG0180004774.01.T01:intron 40.0%
AAATTGAGCTAACGGAGTGT+TGG + Chr1:82594082-82594101 MsG0180004774.01.T01:intron 40.0%
AACCTGAAAGGAGTGGTATA+GGG + Chr1:82591341-82591360 MsG0180004774.01.T01:intron 40.0%
AACTGAGGAAGAGAAAGATG+AGG + Chr1:82591157-82591176 MsG0180004774.01.T01:CDS 40.0%
AAGATGACGATCGTTGTAAC+AGG - Chr1:82592467-82592486 None:intergenic 40.0%
AAGCGAACATAGTTTGGAGA+AGG - Chr1:82596710-82596729 None:intergenic 40.0%
AAGGAGGACAAATACTTGAC+GGG - Chr1:82591870-82591889 None:intergenic 40.0%
ACTCGATGGACCAACTAAAA+AGG - Chr1:82595795-82595814 None:intergenic 40.0%
ACTGATATCTCTAACGCACT+AGG - Chr1:82593487-82593506 None:intergenic 40.0%
AGATGACGATCGTTGTAACA+GGG - Chr1:82592466-82592485 None:intergenic 40.0%
ATAATCCAACCTGAAAGGAG+TGG + Chr1:82591334-82591353 MsG0180004774.01.T01:intron 40.0%
ATCTACAGCTGTGAGAAACA+AGG + Chr1:82596765-82596784 MsG0180004774.01.T01:CDS 40.0%
ATGCTCCAGCTAACAATTGA+AGG + Chr1:82591061-82591080 MsG0180004774.01.T01:intron 40.0%
ATGGATCTAACTGTCCACAA+TGG + Chr1:82590487-82590506 MsG0180004774.01.T01:intron 40.0%
ATTTGGCCAAAACATGCGTT+AGG + Chr1:82594587-82594606 MsG0180004774.01.T01:intron 40.0%
CAAGTTCAGTGAACACTTTC+TGG + Chr1:82596513-82596532 MsG0180004774.01.T01:intron 40.0%
CACTTGTGTGACATAGAGTT+GGG + Chr1:82594420-82594439 MsG0180004774.01.T01:intron 40.0%
CATGCTCTACAACTAGTAAG+TGG + Chr1:82595084-82595103 MsG0180004774.01.T01:intron 40.0%
CATGGAACAATTTGAGGACA+AGG + Chr1:82592002-82592021 MsG0180004774.01.T01:CDS 40.0%
CATGGAGTCACAATTTAGTG+AGG - Chr1:82590366-82590385 None:intergenic 40.0%
CCGAATACAATGTTAAGAGG+TGG + Chr1:82589080-82589099 MsG0180004774.01.T01:intron 40.0%
CCTCACTCCAAATAGACTAA+TGG - Chr1:82591680-82591699 None:intergenic 40.0%
CTAAGGTTTCACTCACTCTT+TGG + Chr1:82589253-82589272 MsG0180004774.01.T01:intron 40.0%
CTAATGGTGTGTAAAGGAGA+AGG - Chr1:82595596-82595615 None:intergenic 40.0%
CTTCTCCTTTACACACCATT+AGG + Chr1:82595594-82595613 MsG0180004774.01.T01:intron 40.0%
GAAGAGAAAATCAACCTGTG+TGG - Chr1:82596252-82596271 None:intergenic 40.0%
GAGTGAAACCTTAGTATGTG+AGG - Chr1:82589247-82589266 None:intergenic 40.0%
GATCAAGGATGTGAGCTAAA+GGG - Chr1:82592166-82592185 None:intergenic 40.0%
GGATGGCGTAAAATTGTTGA+TGG + Chr1:82589923-82589942 MsG0180004774.01.T01:CDS 40.0%
GGGAATCTTGATCCACAATA+AGG + Chr1:82591487-82591506 MsG0180004774.01.T01:intron 40.0%
GTATATATCCTAGGGGACAT+TGG + Chr1:82596343-82596362 MsG0180004774.01.T01:intron 40.0%
GTCAAGTATTTGTCCTCCTT+TGG + Chr1:82591870-82591889 MsG0180004774.01.T01:CDS 40.0%
GTGGAACCATCCATCTATTA+TGG - Chr1:82596233-82596252 None:intergenic 40.0%
TAATGAAGTGAAGCCCACTA+TGG - Chr1:82591138-82591157 None:intergenic 40.0%
TATCTCTAACGCACTAGGTA+AGG - Chr1:82593482-82593501 None:intergenic 40.0%
TATGTCACACAAGTGCTATC+CGG - Chr1:82594415-82594434 None:intergenic 40.0%
TCCATTGCGATAATCCATTG+TGG - Chr1:82590504-82590523 None:intergenic 40.0%
TCGCACATACTCTTTAATCC+CGG + Chr1:82591718-82591737 MsG0180004774.01.T01:intron 40.0%
TGAAATCAGGATCCATTGGA+GGG - Chr1:82589757-82589776 None:intergenic 40.0%
TGGTTTAATTCCAGCGTTTG+TGG - Chr1:82591183-82591202 None:intergenic 40.0%
TGTATTCAATGAATTGCGGC+TGG + Chr1:82596090-82596109 MsG0180004774.01.T01:CDS 40.0%
TTACCAAGTGTGTCATAGAG+AGG - Chr1:82590667-82590686 None:intergenic 40.0%
TTGCTTTGTGTAGATGACTG+TGG + Chr1:82592118-82592137 MsG0180004774.01.T01:intron 40.0%
TTGGTCAAGCGAACATAGTT+TGG - Chr1:82596716-82596735 None:intergenic 40.0%
! AGAGGCACAAATTGAGCTAA+CGG + Chr1:82594074-82594093 MsG0180004774.01.T01:intron 40.0%
! CCATTAGTCTATTTGGAGTG+AGG + Chr1:82591677-82591696 MsG0180004774.01.T01:intron 40.0%
! TGTGGTGCTAAATCTGTAAG+TGG + Chr1:82590147-82590166 MsG0180004774.01.T01:CDS 40.0%
! TTGGGTGACATTGATGACAT+TGG + Chr1:82594438-82594457 MsG0180004774.01.T01:intron 40.0%
!! ACAATGGATTATCGCAATGG+AGG + Chr1:82590503-82590522 MsG0180004774.01.T01:intron 40.0%
!! AGATCTACTAGCCTTCAGAA+AGG + Chr1:82595499-82595518 MsG0180004774.01.T01:intron 40.0%
!! ATGTTTAAGGGTATCGCAAC+TGG + Chr1:82591466-82591485 MsG0180004774.01.T01:intron 40.0%
!! GCTTCTGCTTTAAAAGCATG+TGG + Chr1:82590129-82590148 MsG0180004774.01.T01:CDS 40.0%
!! TCCACAATGGATTATCGCAA+TGG + Chr1:82590500-82590519 MsG0180004774.01.T01:intron 40.0%
!! TGTTTAAGGGTATCGCAACT+GGG + Chr1:82591467-82591486 MsG0180004774.01.T01:intron 40.0%
!!! AGAGGCAAAAGTGTTTTCAC+TGG + Chr1:82596175-82596194 MsG0180004774.01.T01:CDS 40.0%
AAGGTTGAGGAAGGAAAGGA+AGG + Chr1:82589671-82589690 MsG0180004774.01.T01:CDS 45.0%
ACACATATCTCACCACATGG+AGG - Chr1:82596154-82596173 None:intergenic 45.0%
ACCTGAAAGGAGTGGTATAG+GGG + Chr1:82591342-82591361 MsG0180004774.01.T01:intron 45.0%
ACTTGTGCCTTTGTATGCCA+AGG + Chr1:82595706-82595725 MsG0180004774.01.T01:CDS 45.0%
AGACCCGCTTCCATTTGATA+TGG + Chr1:82597361-82597380 MsG0180004774.01.T01:CDS 45.0%
AGAGGATTGTAACCCATGTC+TGG - Chr1:82596124-82596143 None:intergenic 45.0%
ATAGATGGATGGTTCCACAC+AGG + Chr1:82596235-82596254 MsG0180004774.01.T01:CDS 45.0%
ATATGGGTGTCAACATGTGG+AGG + Chr1:82594370-82594389 MsG0180004774.01.T01:intron 45.0%
ATCCTGATTTCACCTCTGCT+TGG + Chr1:82589765-82589784 MsG0180004774.01.T01:CDS 45.0%
ATGTCACACAAGTGCTATCC+GGG - Chr1:82594414-82594433 None:intergenic 45.0%
ATGTGCATGCTAGGCAATGT+TGG + Chr1:82596058-82596077 MsG0180004774.01.T01:CDS 45.0%
ATTCAATGAATTGCGGCTGG+AGG + Chr1:82596093-82596112 MsG0180004774.01.T01:CDS 45.0%
CAACCTGAAAGGAGTGGTAT+AGG + Chr1:82591340-82591359 MsG0180004774.01.T01:intron 45.0%
CACACACACAACCTTTCTGA+AGG - Chr1:82595513-82595532 None:intergenic 45.0%
CACACCATTAGGTCAAAGCA+AGG + Chr1:82595605-82595624 MsG0180004774.01.T01:intron 45.0%
CACTTGGGTGACATAGAGTT+GGG - Chr1:82594538-82594557 None:intergenic 45.0%
CATATGTCATGAGCCAAAGG+AGG - Chr1:82591886-82591905 None:intergenic 45.0%
CATTAGGTCAAAGCAAGGCT+AGG + Chr1:82595610-82595629 MsG0180004774.01.T01:intron 45.0%
CCAAAAACTGTTCTCCTCAC+TGG - Chr1:82595064-82595083 None:intergenic 45.0%
CCAGATGAAATGTGCATGCT+AGG + Chr1:82596049-82596068 MsG0180004774.01.T01:CDS 45.0%
CCAGGTTTGACAGAAACATG+TGG + Chr1:82596007-82596026 MsG0180004774.01.T01:intron 45.0%
CCTAGCATGCACATTTCATC+TGG - Chr1:82596052-82596071 None:intergenic 45.0%
CCTGAAAATATCCCAAGCAG+AGG - Chr1:82589780-82589799 None:intergenic 45.0%
CGATCAAGGATGTGAGCTAA+AGG - Chr1:82592167-82592186 None:intergenic 45.0%
CTGACACATATCTCACCACA+TGG - Chr1:82596157-82596176 None:intergenic 45.0%
GAGAGAAGGTTACGGTAAAC+AGG - Chr1:82589722-82589741 None:intergenic 45.0%
GAGGTGAAATCAGGATCCAT+TGG - Chr1:82589761-82589780 None:intergenic 45.0%
GCACTTGTGTGACATAGAGT+TGG + Chr1:82594419-82594438 MsG0180004774.01.T01:intron 45.0%
GCTACACTTACAGCCATAGT+GGG + Chr1:82591122-82591141 MsG0180004774.01.T01:intron 45.0%
GGAACTAGTGGAGATCCTAA+AGG + Chr1:82591925-82591944 MsG0180004774.01.T01:CDS 45.0%
GGGCTTCACTTCATTAACTG+AGG + Chr1:82591142-82591161 MsG0180004774.01.T01:CDS 45.0%
GGTACACCAGCAAACAATGT+TGG - Chr1:82594838-82594857 None:intergenic 45.0%
GTCTCACACCTCACATACTA+AGG + Chr1:82589236-82589255 MsG0180004774.01.T01:intron 45.0%
GTGAAATCAGGATCCATTGG+AGG - Chr1:82589758-82589777 None:intergenic 45.0%
GTGCATATGTCATGAGCCAA+AGG - Chr1:82591889-82591908 None:intergenic 45.0%
GTTGAATGCATGCAGTCACA+CGG - Chr1:82590233-82590252 None:intergenic 45.0%
TAGAAAGATAGACGGCACGT+TGG + Chr1:82592295-82592314 MsG0180004774.01.T01:intron 45.0%
TATGGGTGTCAACATGTGGA+GGG + Chr1:82594371-82594390 MsG0180004774.01.T01:intron 45.0%
TCCTGATTTCACCTCTGCTT+GGG + Chr1:82589766-82589785 MsG0180004774.01.T01:CDS 45.0%
TGCAGGTATCAAGAAAGCAG+TGG + Chr1:82595027-82595046 MsG0180004774.01.T01:intron 45.0%
TGGCACAACTAAATCCAGTG+AGG + Chr1:82595047-82595066 MsG0180004774.01.T01:intron 45.0%
TGTATGCCAAGGCTATGGTA+AGG + Chr1:82595717-82595736 MsG0180004774.01.T01:intron 45.0%
TGTGGTGAGATATGTGTCAG+AGG + Chr1:82596157-82596176 MsG0180004774.01.T01:CDS 45.0%
TTTGTCAAAGAGACGAGACG+AGG + Chr1:82590011-82590030 MsG0180004774.01.T01:intron 45.0%
! ACCATAGCCTTGGCATACAA+AGG - Chr1:82595716-82595735 None:intergenic 45.0%
! AGTGCTTTTGATGCAGGTTC+TGG + Chr1:82590753-82590772 MsG0180004774.01.T01:intron 45.0%
! ATTGTTTGCTGGTGTACCAC+GGG + Chr1:82594840-82594859 MsG0180004774.01.T01:intron 45.0%
! CATTGTTTGCTGGTGTACCA+CGG + Chr1:82594839-82594858 MsG0180004774.01.T01:intron 45.0%
! CCACATGTTTCTGTCAAACC+TGG - Chr1:82596010-82596029 None:intergenic 45.0%
! CCAGTGAGGAGAACAGTTTT+TGG + Chr1:82595061-82595080 MsG0180004774.01.T01:intron 45.0%
! CCTCTGCTTGGGATATTTTC+AGG + Chr1:82589777-82589796 MsG0180004774.01.T01:CDS 45.0%
! CGGGTTTTCTTTTCCCTGTA+AGG - Chr1:82591851-82591870 None:intergenic 45.0%
! CTATACCACTCCTTTCAGGT+TGG - Chr1:82591342-82591361 None:intergenic 45.0%
! GACATGGGTTACAATCCTCT+TGG + Chr1:82596124-82596143 MsG0180004774.01.T01:CDS 45.0%
!! CTAGCCTTGCTTTGACCTAA+TGG - Chr1:82595612-82595631 None:intergenic 45.0%
!! AAAACAATAAAAAAAAAATT+TGG - Chr1:82594955-82594974 None:intergenic 5.0%
!! AATAAATTTAATAATTGTAT+TGG - Chr1:82595242-82595261 None:intergenic 5.0%
!! ATAGAAATATATTAAAATTA+TGG + Chr1:82595344-82595363 MsG0180004774.01.T01:intron 5.0%
!! TTTAAATTAAAAAAAAAGTT+TGG + Chr1:82593761-82593780 MsG0180004774.01.T01:intron 5.0%
!!! ATATTTAAAATAAAATGAAA+AGG - Chr1:82589348-82589367 None:intergenic 5.0%
!!! CAATTTATTTTTATTTTTTT+GGG + Chr1:82592331-82592350 MsG0180004774.01.T01:intron 5.0%
!!! TTTTAATAATTGATTTTATT+TGG + Chr1:82594972-82594991 MsG0180004774.01.T01:intron 5.0%
AAAGATGAGGCCACAAACGC+TGG + Chr1:82591170-82591189 MsG0180004774.01.T01:CDS 50.0%
ACATCCTCAAAACCGCATGC+TGG + Chr1:82589901-82589920 MsG0180004774.01.T01:CDS 50.0%
AGGGAGCTTCAGATAGCACT+TGG - Chr1:82594554-82594573 None:intergenic 50.0%
CAAGGATGTGAGCTAAAGGG+AGG - Chr1:82592163-82592182 None:intergenic 50.0%
CAAGGCTATGGTAAGGACCT+TGG + Chr1:82595724-82595743 MsG0180004774.01.T01:intron 50.0%
CAAGGTCCTTACCATAGCCT+TGG - Chr1:82595726-82595745 None:intergenic 50.0%
CATCCTCAAAACCGCATGCT+GGG + Chr1:82589902-82589921 MsG0180004774.01.T01:CDS 50.0%
CTGGAGGAAGTTCCAGACAT+GGG + Chr1:82596109-82596128 MsG0180004774.01.T01:CDS 50.0%
GAAGGATCTGAATGCGTTGC+TGG + Chr1:82594792-82594811 MsG0180004774.01.T01:intron 50.0%
GATGTGAGCTAAAGGGAGGA+AGG - Chr1:82592159-82592178 None:intergenic 50.0%
GCACTTGGGTGACATAGAGT+TGG - Chr1:82594539-82594558 None:intergenic 50.0%
GCATTTCTCCAATGTCCCCT+AGG - Chr1:82596354-82596373 None:intergenic 50.0%
GCCTTTGTATGCCAAGGCTA+TGG + Chr1:82595712-82595731 MsG0180004774.01.T01:CDS 50.0%
GGCTACACTTACAGCCATAG+TGG + Chr1:82591121-82591140 MsG0180004774.01.T01:intron 50.0%
GGGAGCTTCAGATAGCACTT+GGG - Chr1:82594553-82594572 None:intergenic 50.0%
GTATCCTTAACCCATGCTCG+AGG - Chr1:82593379-82593398 None:intergenic 50.0%
GTGCCTCTCTATGACACACT+TGG + Chr1:82590661-82590680 MsG0180004774.01.T01:CDS 50.0%
TACCCCGTGATAGTAACCCA+CGG - Chr1:82592225-82592244 None:intergenic 50.0%
TAGGTCAAAGCAAGGCTAGG+CGG + Chr1:82595613-82595632 MsG0180004774.01.T01:intron 50.0%
TCCCAAGCAGAGGTGAAATC+AGG - Chr1:82589770-82589789 None:intergenic 50.0%
TCCCCTATACCACTCCTTTC+AGG - Chr1:82591346-82591365 None:intergenic 50.0%
! ATCCGTGGGTTACTATCACG+GGG + Chr1:82592220-82592239 MsG0180004774.01.T01:CDS 50.0%
! CATCCGTGGGTTACTATCAC+GGG + Chr1:82592219-82592238 MsG0180004774.01.T01:CDS 50.0%
! GCATCCGTGGGTTACTATCA+CGG + Chr1:82592218-82592237 MsG0180004774.01.T01:CDS 50.0%
! GTTGTGACTTGTGAAGCTCC+CGG + Chr1:82594393-82594412 MsG0180004774.01.T01:intron 50.0%
! TGTGCGCCTAACGCATGTTT+TGG - Chr1:82594596-82594615 None:intergenic 50.0%
! TTTTACGCCATCCCAGCATG+CGG - Chr1:82589916-82589935 None:intergenic 50.0%
AACCCACGGATGCACCGTTA+CGG - Chr1:82592211-82592230 None:intergenic 55.0%
ACATGCGTTAGGCGCACATG+TGG + Chr1:82594598-82594617 MsG0180004774.01.T01:intron 55.0%
CCACATGGAGGAGTTCCAAG+AGG - Chr1:82596142-82596161 None:intergenic 55.0%
CCTCTTGGAACTCCTCCATG+TGG + Chr1:82596139-82596158 MsG0180004774.01.T01:CDS 55.0%
CTCAAAACCGCATGCTGGGA+TGG + Chr1:82589906-82589925 MsG0180004774.01.T01:CDS 55.0%
GCTGGAGGAAGTTCCAGACA+TGG + Chr1:82596108-82596127 MsG0180004774.01.T01:CDS 55.0%
GGATCTGAATGCGTTGCTGG+AGG + Chr1:82594795-82594814 MsG0180004774.01.T01:intron 55.0%
TTAACCCATGCTCGAGGCAC+CGG - Chr1:82593373-82593392 None:intergenic 55.0%
TTCCGTAACGGTGCATCCGT+GGG + Chr1:82592206-82592225 MsG0180004774.01.T01:CDS 55.0%
TTTCCGTAACGGTGCATCCG+TGG + Chr1:82592205-82592224 MsG0180004774.01.T01:CDS 55.0%
! CATCCCAGCATGCGGTTTTG+AGG - Chr1:82589908-82589927 None:intergenic 55.0%
CTAACCGGTGCCTCGAGCAT+GGG + Chr1:82593366-82593385 MsG0180004774.01.T01:intron 60.0%
GTTAGGCGCACATGTGGTGC+CGG + Chr1:82594604-82594623 MsG0180004774.01.T01:intron 60.0%
! GGTGCCTCGAGCATGGGTTA+AGG + Chr1:82593372-82593391 MsG0180004774.01.T01:intron 60.0%
GCTAACCGGTGCCTCGAGCA+TGG + Chr1:82593365-82593384 MsG0180004774.01.T01:intron 65.0%
!! GCACATGTGGTGCCGGTCCA+GGG + Chr1:82594611-82594630 MsG0180004774.01.T01:intron 65.0%
!! CGCACATGTGGTGCCGGTCC+AGG + Chr1:82594610-82594629 MsG0180004774.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 82589052 82597478 82589052 ID=MsG0180004774.01;Name=MsG0180004774.01
Chr1 mRNA 82589052 82597478 82589052 ID=MsG0180004774.01.T01;Parent=MsG0180004774.01;Name=MsG0180004774.01.T01;_AED=0.40;_eAED=0.43;_QI=0|0.64|0.66|1|0.85|0.86|15|0|610
Chr1 exon 82589052 82589098 82589052 ID=MsG0180004774.01.T01:exon:8552;Parent=MsG0180004774.01.T01
Chr1 exon 82589634 82589822 82589634 ID=MsG0180004774.01.T01:exon:8553;Parent=MsG0180004774.01.T01
Chr1 exon 82589886 82589949 82589886 ID=MsG0180004774.01.T01:exon:8554;Parent=MsG0180004774.01.T01
Chr1 exon 82590072 82590194 82590072 ID=MsG0180004774.01.T01:exon:8555;Parent=MsG0180004774.01.T01
Chr1 exon 82590634 82590682 82590634 ID=MsG0180004774.01.T01:exon:8556;Parent=MsG0180004774.01.T01
Chr1 exon 82590769 82590845 82590769 ID=MsG0180004774.01.T01:exon:8557;Parent=MsG0180004774.01.T01
Chr1 exon 82590989 82591058 82590989 ID=MsG0180004774.01.T01:exon:8558;Parent=MsG0180004774.01.T01
Chr1 exon 82591135 82591229 82591135 ID=MsG0180004774.01.T01:exon:8559;Parent=MsG0180004774.01.T01
Chr1 exon 82591856 82592023 82591856 ID=MsG0180004774.01.T01:exon:8560;Parent=MsG0180004774.01.T01
Chr1 exon 82592131 82592241 82592131 ID=MsG0180004774.01.T01:exon:8561;Parent=MsG0180004774.01.T01
Chr1 exon 82595616 82595733 82595616 ID=MsG0180004774.01.T01:exon:8562;Parent=MsG0180004774.01.T01
Chr1 exon 82596011 82596256 82596011 ID=MsG0180004774.01.T01:exon:8563;Parent=MsG0180004774.01.T01
Chr1 exon 82596356 82596495 82596356 ID=MsG0180004774.01.T01:exon:8564;Parent=MsG0180004774.01.T01
Chr1 exon 82596604 82596786 82596604 ID=MsG0180004774.01.T01:exon:8565;Parent=MsG0180004774.01.T01
Chr1 exon 82597326 82597478 82597326 ID=MsG0180004774.01.T01:exon:8566;Parent=MsG0180004774.01.T01
Chr1 CDS 82589052 82589098 82589052 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82589634 82589822 82589634 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82589886 82589949 82589886 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82590072 82590194 82590072 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82590634 82590682 82590634 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82590769 82590845 82590769 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82590989 82591058 82590989 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82591135 82591229 82591135 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82591856 82592023 82591856 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82592131 82592241 82592131 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82595616 82595733 82595616 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82596011 82596256 82596011 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82596356 82596495 82596356 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82596604 82596786 82596604 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Chr1 CDS 82597326 82597478 82597326 ID=MsG0180004774.01.T01:cds;Parent=MsG0180004774.01.T01
Gene Sequence

>MsG0180004774.01.T01

ATGACCAAGAATTACACTGTAGGATTCTCCGAATACAATGTTAAGAGATTTTTGTTGCAAAGAAGAATGAAGAGCTTTTCAATTAAGGTTGAGGAAGGAAAGGAAGGAAAAAATGGCATGCTTTCTGTTGGTCCTGTTTACCGTAACCTTCTCTCCAAAAATGAATTCCCTCCAATGGATCCTGATTTCACCTCTGCTTGGGATATTTTCAGGCAATTTATTTCACTGTTTATAAGTACGTCTGTCAAAAAACATCCTCAAAACCGCATGCTGGGATGGCGTAAAATTGTTGATGGAAAGATAGGACCATATGTTTGGAAGACATACAAGGAAGCTTATGATGAAGTTTTACAAATTGCTTCTGCTTTAAAAGCATGTGGTGCTAAATCTGTAAGTGGTTGCAAAAAGTGCTTCACTCATAATGCTTGTTCTGCACAAAACTTCATTTGTGTGCCTCTCTATGACACACTTGGTTCTGGTGCTATAAATTTTATCATAGATCATGCAGAAATAGATTATGTTTTTGTTCAAGATAAGAAGGTTAAAGAGCTTTTGAATGCTGACTGTAAATCCTCTAAGAGATTGAAAGGTAATTTACTAAGTTTCAATTTCAATATTGCCATAGTGGGCTTCACTTCATTAACTGAGGAAGAGAAAGATGAGGCCACAAACGCTGGAATTAAACCATATACATGGAATCAATTCGTACAAAAGGGAAAAGAAAACCCGTCAAGTATTTGTCCTCCTTTGGCTCATGACATATGCACAATAATGTATACAAGTGGAACTAGTGGAGATCCTAAAGGTGTTGTTTTAACACATGAAAACGTACTAGCTTTAGTAAGAGGAATGGATCTTTTCATGGAACAATTTGAGGACAAGATGACTGTGGATGATGTGTATTTATCCTTCCTCCCTTTAGCTCACATCCTTGATCGTTGTATTGAAGAATATTTTTTCCGTAACGGTGCATCCGTGGGTTACTATCACGGGGTCAAAGCAAGGCTAGGCGGACGTGTTAGACTAATAATATCTGGAGGTGCAGCCTTAAGCTCTGAGATTGAAGAATTCTTGCGTGTCACTACTTGTGCCTTTGTATGCCAAGGCTATGGTTTGACAGAAACATGTGGACCAACTACTCTTACATTTCCAGATGAAATGTGCATGCTAGGCAATGTTGGTGTTGTAACTGTATTCAATGAATTGCGGCTGGAGGAAGTTCCAGACATGGGTTACAATCCTCTTGGAACTCCTCCATGTGGTGAGATATGTGTCAGAGGCAAAAGTGTTTTCACTGGTTACCATAAAAATCCTGAGTTAACAAAAGAAGCCATAATAGATGGATGGTTCCACACAGGGGACATTGGAGAAATGCTTCCTAATGGTATTATGAGGATTATTGACAGGAAGAAGAATCTTGTTAAGCTTTCTCAAGGAGAGTATATAGCCCTTGAGTATCTTGAAAATGTTTATACAATCACTCCAATAGTTGAAGATATTTGGGTATATGGGAATAGCTTCAAGTCAATACTGGTTGCAGTAGTAGTTCCAAATGAAGATGTTGCTAATAAGTGGGCATATGCAAATGGTCACATATCTTCCTTCTCCAAACTATGTTCGCTTGACCAATTGAAGAGATATGTGCTATCTGAGCTCAAATCTACAGCTGTGAGAAACAAGTTGAAGGGATTTGAACATATCAAAGGCGTAATATTAGACCCGCTTCCATTTGATATGGAAAGAGACTTGGTAACTGCAACATTGAAAAAGAAAAGGAACAACATGATCAAGTATTATAAGGTATTTGATATTCTCTTTCTTTTCCCTTACTAA
Protein sequence

>MsG0180004774.01.T01

MTKNYTVGFSEYNVKRFLLQRRMKSFSIKVEEGKEGKNGMLSVGPVYRNLLSKNEFPPMDPDFTSAWDIFRQFISLFISTSVKKHPQNRMLGWRKIVDGKIGPYVWKTYKEAYDEVLQIASALKACGAKSVSGCKKCFTHNACSAQNFICVPLYDTLGSGAINFIIDHAEIDYVFVQDKKVKELLNADCKSSKRLKGNLLSFNFNIAIVGFTSLTEEEKDEATNAGIKPYTWNQFVQKGKENPSSICPPLAHDICTIMYTSGTSGDPKGVVLTHENVLALVRGMDLFMEQFEDKMTVDDVYLSFLPLAHILDRCIEEYFFRNGASVGYYHGVKARLGGRVRLIISGGAALSSEIEEFLRVTTCAFVCQGYGLTETCGPTTLTFPDEMCMLGNVGVVTVFNELRLEEVPDMGYNPLGTPPCGEICVRGKSVFTGYHKNPELTKEAIIDGWFHTGDIGEMLPNGIMRIIDRKKNLVKLSQGEYIALEYLENVYTITPIVEDIWVYGNSFKSILVAVVVPNEDVANKWAYANGHISSFSKLCSLDQLKRYVLSELKSTAVRNKLKGFEHIKGVILDPLPFDMERDLVTATLKKKRNNMIKYYKVFDILFLFPY*