AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016055.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016055.01.T01 MTR_3g082660 98.762 727 9 0 1 727 1 727 0.0 1473
MsG0380016055.01.T01 MTR_1g030290 62.878 695 252 5 35 727 5 695 0.0 904
MsG0380016055.01.T01 MTR_3g087980 60.719 695 269 2 33 727 3 693 0.0 901
MsG0380016055.01.T01 MTR_1g104810 34.992 603 359 11 131 727 43 618 2.10e-113 356
MsG0380016055.01.T01 MTR_1g104810 33.953 645 379 13 89 727 82 685 1.08e-112 356
MsG0380016055.01.T01 MTR_5g009350 32.975 652 393 13 83 726 39 654 9.18e-103 329
MsG0380016055.01.T01 MTR_5g009350 33.438 640 382 13 83 714 39 642 8.04e-102 327
MsG0380016055.01.T01 MTR_5g009360 32.515 652 396 12 83 726 39 654 4.30e-101 325
MsG0380016055.01.T01 MTR_4g068670 32.838 606 369 14 132 726 73 651 1.13e-98 318
MsG0380016055.01.T01 MTR_8g099420 30.435 667 420 12 68 726 25 655 3.45e-98 317
MsG0380016055.01.T01 MTR_1g034360 32.526 661 390 17 79 726 36 653 2.13e-96 312
MsG0380016055.01.T01 MTR_7g109830 31.424 646 399 14 89 726 43 652 1.33e-92 302
MsG0380016055.01.T01 MTR_5g009360 35.259 502 296 9 232 726 49 528 6.61e-86 281
MsG0380016055.01.T01 MTR_1g086600 30.374 642 405 12 93 726 69 676 4.21e-84 280
MsG0380016055.01.T01 MTR_5g009350 32.486 551 329 12 83 625 39 554 5.99e-83 275
MsG0380016055.01.T01 MTR_5g009350 32.394 568 341 12 83 642 39 571 8.02e-83 274
MsG0380016055.01.T01 MTR_3g084450 25.116 645 394 20 138 726 108 719 3.91e-41 161
MsG0380016055.01.T01 MTR_3g084470 24.923 646 391 24 138 726 106 714 8.15e-37 148
MsG0380016055.01.T01 MTR_8g083170 24.143 642 406 17 138 726 110 723 2.61e-36 146
MsG0380016055.01.T01 MTR_3g084450 26.283 487 286 16 283 726 55 511 5.18e-35 140
MsG0380016055.01.T01 MTR_2g105570 26.069 491 267 19 138 611 55 466 3.19e-19 92.4
MsG0380016055.01.T01 MTR_4g077900 27.928 333 172 12 284 609 123 394 1.55e-18 89.7
MsG0380016055.01.T01 MTR_5g007640 23.926 489 276 20 138 611 98 505 1.45e-17 87.4
MsG0380016055.01.T01 MTR_5g027500 26.705 352 179 14 272 611 202 486 4.44e-17 85.5
MsG0380016055.01.T01 MTR_1g063110 24.419 344 184 12 279 611 188 466 6.66e-17 85.1
MsG0380016055.01.T01 MTR_4g005750 26.946 501 268 21 135 620 51 468 7.44e-17 84.7
MsG0380016055.01.T01 MTR_4g128337 25.103 486 275 19 135 609 57 464 1.01e-14 78.2
MsG0380016055.01.T02 MTR_3g082660 98.762 727 9 0 1 727 1 727 0.0 1473
MsG0380016055.01.T02 MTR_1g030290 62.878 695 252 5 35 727 5 695 0.0 904
MsG0380016055.01.T02 MTR_3g087980 60.719 695 269 2 33 727 3 693 0.0 901
MsG0380016055.01.T02 MTR_1g104810 34.992 603 359 11 131 727 43 618 2.10e-113 356
MsG0380016055.01.T02 MTR_1g104810 33.953 645 379 13 89 727 82 685 1.08e-112 356
MsG0380016055.01.T02 MTR_5g009350 32.975 652 393 13 83 726 39 654 9.18e-103 329
MsG0380016055.01.T02 MTR_5g009350 33.438 640 382 13 83 714 39 642 8.04e-102 327
MsG0380016055.01.T02 MTR_5g009360 32.515 652 396 12 83 726 39 654 4.30e-101 325
MsG0380016055.01.T02 MTR_4g068670 32.838 606 369 14 132 726 73 651 1.13e-98 318
MsG0380016055.01.T02 MTR_8g099420 30.435 667 420 12 68 726 25 655 3.45e-98 317
MsG0380016055.01.T02 MTR_1g034360 32.526 661 390 17 79 726 36 653 2.13e-96 312
MsG0380016055.01.T02 MTR_7g109830 31.424 646 399 14 89 726 43 652 1.33e-92 302
MsG0380016055.01.T02 MTR_5g009360 35.259 502 296 9 232 726 49 528 6.61e-86 281
MsG0380016055.01.T02 MTR_1g086600 30.374 642 405 12 93 726 69 676 4.21e-84 280
MsG0380016055.01.T02 MTR_5g009350 32.486 551 329 12 83 625 39 554 5.99e-83 275
MsG0380016055.01.T02 MTR_5g009350 32.394 568 341 12 83 642 39 571 8.02e-83 274
MsG0380016055.01.T02 MTR_3g084450 25.116 645 394 20 138 726 108 719 3.91e-41 161
MsG0380016055.01.T02 MTR_3g084470 24.923 646 391 24 138 726 106 714 8.15e-37 148
MsG0380016055.01.T02 MTR_8g083170 24.143 642 406 17 138 726 110 723 2.61e-36 146
MsG0380016055.01.T02 MTR_3g084450 26.283 487 286 16 283 726 55 511 5.18e-35 140
MsG0380016055.01.T02 MTR_2g105570 26.069 491 267 19 138 611 55 466 3.19e-19 92.4
MsG0380016055.01.T02 MTR_4g077900 27.928 333 172 12 284 609 123 394 1.55e-18 89.7
MsG0380016055.01.T02 MTR_5g007640 23.926 489 276 20 138 611 98 505 1.45e-17 87.4
MsG0380016055.01.T02 MTR_5g027500 26.705 352 179 14 272 611 202 486 4.44e-17 85.5
MsG0380016055.01.T02 MTR_1g063110 24.419 344 184 12 279 611 188 466 6.66e-17 85.1
MsG0380016055.01.T02 MTR_4g005750 26.946 501 268 21 135 620 51 468 7.44e-17 84.7
MsG0380016055.01.T02 MTR_4g128337 25.103 486 275 19 135 609 57 464 1.01e-14 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016055.01.T01 AT2G04350 72.566 678 186 0 50 727 43 720 0.0 1047
MsG0380016055.01.T01 AT2G04350 72.566 678 186 0 50 727 43 720 0.0 1047
MsG0380016055.01.T01 AT1G77590 64.255 691 241 1 37 727 7 691 0.0 955
MsG0380016055.01.T01 AT1G77590 67.273 550 174 1 178 727 2 545 0.0 801
MsG0380016055.01.T01 AT5G27600 34.735 642 378 9 89 727 85 688 2.05e-124 387
MsG0380016055.01.T01 AT3G05970 34.633 641 378 10 89 726 85 687 1.78e-117 369
MsG0380016055.01.T01 AT4G23850 32.466 653 395 14 83 726 40 655 1.75e-105 337
MsG0380016055.01.T01 AT4G11030 31.957 654 397 14 83 726 40 655 4.42e-102 328
MsG0380016055.01.T01 AT1G64400 32.143 644 389 14 93 726 50 655 6.61e-100 322
MsG0380016055.01.T01 AT1G49430 31.155 658 400 14 80 727 44 658 1.42e-99 321
MsG0380016055.01.T01 AT2G47240 31.595 652 390 15 89 726 43 652 8.93e-95 308
MsG0380016055.01.T01 AT2G47240 31.595 652 390 15 89 726 43 652 8.93e-95 308
MsG0380016055.01.T01 AT2G47240 31.595 652 390 15 89 726 43 652 8.93e-95 308
MsG0380016055.01.T01 AT2G47240 31.767 617 379 13 124 726 5 593 7.23e-93 301
MsG0380016055.01.T01 AT1G49430 30.279 502 297 14 80 571 44 502 3.87e-64 223
MsG0380016055.01.T01 AT4G14070 24.181 641 394 19 138 727 128 727 2.16e-38 152
MsG0380016055.01.T01 AT3G23790 23.438 640 409 16 138 726 112 721 4.38e-38 152
MsG0380016055.01.T01 AT4G19010 26.702 382 207 12 280 651 203 521 8.98e-21 97.4
MsG0380016055.01.T01 AT1G20500 25.000 352 193 13 279 625 195 480 4.27e-18 89.0
MsG0380016055.01.T01 AT1G20510 25.816 337 179 12 280 609 188 460 4.52e-15 79.0
MsG0380016055.01.T01 AT1G20510 25.816 337 179 12 280 609 188 460 5.46e-15 79.0
MsG0380016055.01.T01 AT1G77240 43.956 91 46 2 534 624 390 475 1.39e-11 68.2
MsG0380016055.01.T01 AT4G05160 30.220 182 104 9 452 625 308 474 1.75e-11 67.8
MsG0380016055.01.T01 AT1G75960 33.333 198 91 8 449 624 296 474 2.61e-11 67.4
MsG0380016055.01.T01 AT1G20480 32.298 161 98 6 452 609 329 481 6.76e-11 65.9
MsG0380016055.01.T01 AT5G16340 42.857 91 46 2 534 624 390 474 7.01e-11 65.9
MsG0380016055.01.T01 AT5G16370 34.940 166 81 6 475 624 320 474 7.03e-11 65.9
MsG0380016055.01.T01 AT1G20560 43.956 91 45 2 534 624 316 400 9.19e-11 65.5
MsG0380016055.01.T02 AT2G04350 72.566 678 186 0 50 727 43 720 0.0 1047
MsG0380016055.01.T02 AT2G04350 72.566 678 186 0 50 727 43 720 0.0 1047
MsG0380016055.01.T02 AT1G77590 64.255 691 241 1 37 727 7 691 0.0 955
MsG0380016055.01.T02 AT1G77590 67.273 550 174 1 178 727 2 545 0.0 801
MsG0380016055.01.T02 AT5G27600 34.735 642 378 9 89 727 85 688 2.05e-124 387
MsG0380016055.01.T02 AT3G05970 34.633 641 378 10 89 726 85 687 1.78e-117 369
MsG0380016055.01.T02 AT4G23850 32.466 653 395 14 83 726 40 655 1.75e-105 337
MsG0380016055.01.T02 AT4G11030 31.957 654 397 14 83 726 40 655 4.42e-102 328
MsG0380016055.01.T02 AT1G64400 32.143 644 389 14 93 726 50 655 6.61e-100 322
MsG0380016055.01.T02 AT1G49430 31.155 658 400 14 80 727 44 658 1.42e-99 321
MsG0380016055.01.T02 AT2G47240 31.595 652 390 15 89 726 43 652 8.93e-95 308
MsG0380016055.01.T02 AT2G47240 31.595 652 390 15 89 726 43 652 8.93e-95 308
MsG0380016055.01.T02 AT2G47240 31.595 652 390 15 89 726 43 652 8.93e-95 308
MsG0380016055.01.T02 AT2G47240 31.767 617 379 13 124 726 5 593 7.23e-93 301
MsG0380016055.01.T02 AT1G49430 30.279 502 297 14 80 571 44 502 3.87e-64 223
MsG0380016055.01.T02 AT4G14070 24.181 641 394 19 138 727 128 727 2.16e-38 152
MsG0380016055.01.T02 AT3G23790 23.438 640 409 16 138 726 112 721 4.38e-38 152
MsG0380016055.01.T02 AT4G19010 26.702 382 207 12 280 651 203 521 8.98e-21 97.4
MsG0380016055.01.T02 AT1G20500 25.000 352 193 13 279 625 195 480 4.27e-18 89.0
MsG0380016055.01.T02 AT1G20510 25.816 337 179 12 280 609 188 460 4.52e-15 79.0
MsG0380016055.01.T02 AT1G20510 25.816 337 179 12 280 609 188 460 5.46e-15 79.0
MsG0380016055.01.T02 AT1G77240 43.956 91 46 2 534 624 390 475 1.39e-11 68.2
MsG0380016055.01.T02 AT4G05160 30.220 182 104 9 452 625 308 474 1.75e-11 67.8
MsG0380016055.01.T02 AT1G75960 33.333 198 91 8 449 624 296 474 2.61e-11 67.4
MsG0380016055.01.T02 AT1G20480 32.298 161 98 6 452 609 329 481 6.76e-11 65.9
MsG0380016055.01.T02 AT5G16340 42.857 91 46 2 534 624 390 474 7.01e-11 65.9
MsG0380016055.01.T02 AT5G16370 34.940 166 81 6 475 624 320 474 7.03e-11 65.9
MsG0380016055.01.T02 AT1G20560 43.956 91 45 2 534 624 316 400 9.19e-11 65.5

Find 51 sgRNAs with CRISPR-Local

Find 469 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATACACATAATAGATTTCT+TGG 0.222635 3:+78480155 MsG0380016055.01.T01:CDS
CTTGGAACAAGGAAACTAAT+AGG 0.243114 3:+78480173 MsG0380016055.01.T01:CDS
AAAGAGCAAAGAGAATTAAT+TGG 0.262983 3:-78479622 None:intergenic
TTGAATATCTGTGAAACATT+TGG 0.271360 3:+78479894 MsG0380016055.01.T01:CDS
CTAATCTATTATTCTCCCTT+TGG 0.303426 3:+78479715 MsG0380016055.01.T01:intron
AAGAAGACCAGATGCAAAAT+TGG 0.311975 3:-78480294 None:intergenic
TCTGAGTGGTTATATTATAA+AGG 0.313904 3:-78479647 None:intergenic
TTTAGCTAAAGTTTGGGTTT+TGG 0.331076 3:-78479387 None:intergenic
GCATCTGGTCTTCTTAAGTT+AGG 0.341113 3:+78480302 MsG0380016055.01.T01:CDS
GTGTGTGTTTAGCTAAAGTT+TGG 0.370337 3:-78479394 None:intergenic
TGAATATCTGTGAAACATTT+GGG 0.397057 3:+78479895 MsG0380016055.01.T01:CDS
TTGGAACAAGGAAACTAATA+GGG 0.401463 3:+78480174 MsG0380016055.01.T01:CDS
CTGAGTTGGTTGAAGTTCCT+TGG 0.401688 3:+78480084 MsG0380016055.01.T01:CDS
AGGTAAAGTACGTGGTGTTC+CGG 0.403960 3:+78480013 MsG0380016055.01.T01:CDS
AACCATGAGGAACTACCGTT+TGG 0.405080 3:-78479864 None:intergenic
GGTGGAAGTTAGTGGTGAAT+CGG 0.423699 3:+78480034 MsG0380016055.01.T01:CDS
TTGAAAGATCATGGAGAACT+TGG 0.436843 3:+78479918 MsG0380016055.01.T01:CDS
TGAGTGGTTCATTGCCCTCC+AGG 0.439261 3:+78480370 MsG0380016055.01.T01:CDS
TTCACTTAGGAGAATATGAA+TGG 0.439911 3:+78480240 MsG0380016055.01.T01:CDS
ACATTTGGGTTGAAAGATCA+TGG 0.443508 3:+78479909 MsG0380016055.01.T01:CDS
ATAGTGTTTGCTATAGTCAT+AGG 0.470451 3:+78479942 MsG0380016055.01.T01:CDS
GAATATGAATGGGAAACCTA+TGG 0.506008 3:+78480251 MsG0380016055.01.T01:CDS
TGTGTGTTTAGCTAAAGTTT+GGG 0.507996 3:-78479393 None:intergenic
CAACATGACTATCTATATCA+TGG 0.514299 3:-78480325 None:intergenic
AAAGTTAAATTGAAACCAAA+GGG 0.521972 3:-78479730 None:intergenic
GTGGAAGTTAGTGGTGAATC+GGG 0.522733 3:+78480035 MsG0380016055.01.T01:CDS
GAGCAAAGAGAATTAATTGG+AGG 0.524953 3:-78479619 None:intergenic
TAATGCTCGATATTCTGAGT+TGG 0.537351 3:+78480070 MsG0380016055.01.T01:CDS
TTGGTTGAAGTTCCTTGGAA+AGG 0.537578 3:+78480089 MsG0380016055.01.T01:CDS
TTGTTACATCAAGTGATGGC+AGG 0.538883 3:+78480204 MsG0380016055.01.T01:CDS
GGTGTTCCGGTGGAAGTTAG+TGG 0.553138 3:+78480026 MsG0380016055.01.T01:CDS
AAAAGTTAAATTGAAACCAA+AGG 0.555435 3:-78479731 None:intergenic
ATGGTTGGAGCTCCTTTCCA+AGG 0.557226 3:-78480101 None:intergenic
CACAACATGGTTGATCCAAA+CGG 0.559941 3:+78479849 MsG0380016055.01.T01:exon
ATCCAAACGGTAGTTCCTCA+TGG 0.563796 3:+78479862 MsG0380016055.01.T01:CDS
TCACTTAGGAGAATATGAAT+GGG 0.566249 3:+78480241 MsG0380016055.01.T01:CDS
AAATTTGAGAAAGTTCACTT+AGG 0.575885 3:+78480227 MsG0380016055.01.T01:CDS
GAATTTGTTACATCAAGTGA+TGG 0.586545 3:+78480200 MsG0380016055.01.T01:CDS
GCGAGCAAAGACTTCTCCAT+AGG 0.589084 3:-78480267 None:intergenic
TCAAATAAATGAGCCATGGT+TGG 0.593828 3:-78480116 None:intergenic
TTGGAAAGGAGCTCCAACCA+TGG 0.595344 3:+78480103 MsG0380016055.01.T01:CDS
AACAAGGAAACTAATAGGGA+AGG 0.605543 3:+78480178 MsG0380016055.01.T01:CDS
TAAAGTACGTGGTGTTCCGG+TGG 0.609917 3:+78480016 MsG0380016055.01.T01:CDS
ATAATAGATTTCTTGGAACA+AGG 0.610981 3:+78480162 MsG0380016055.01.T01:CDS
GTAAATCAAATTTACCTGGA+GGG 0.617336 3:-78480384 None:intergenic
GATTCACCACTAACTTCCAC+CGG 0.619049 3:-78480032 None:intergenic
TAGCATTTCATCGTAACCAA+AGG 0.639266 3:+78479443 MsG0380016055.01.T01:five_prime_UTR
TTTCTGATACTCGGGCTGAG+TGG 0.652876 3:+78480354 MsG0380016055.01.T01:CDS
TTGCTCAAATAAATGAGCCA+TGG 0.675815 3:-78480120 None:intergenic
AAGAAGAAAGGTAAAGTACG+TGG 0.680735 3:+78480005 MsG0380016055.01.T01:CDS
TGTATGTATCTGAATCTGAG+TGG 0.779438 3:-78479661 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGATTTTGTTATTATTT+TGG + Chr3:78484048-78484067 MsG0380016055.01.T01:intron 10.0%
!!! TAACATTTTGTTATTATTTA+GGG + Chr3:78481342-78481361 MsG0380016055.01.T01:intron 10.0%
!!! TTAACATTTTGTTATTATTT+AGG + Chr3:78481341-78481360 MsG0380016055.01.T01:intron 10.0%
!!! TTTATTCTATAAAGATTTTT+AGG + Chr3:78481181-78481200 MsG0380016055.01.T01:intron 10.0%
!!! ATTTGAAATTCAAATTAGTA+AGG + Chr3:78483123-78483142 MsG0380016055.01.T01:intron 15.0%
!!! TTATCTATTATGTTTTAACA+AGG + Chr3:78485594-78485613 MsG0380016055.01.T01:intron 15.0%
!! AAAAGTTAAATTGAAACCAA+AGG - Chr3:78479734-78479753 None:intergenic 20.0%
!! AAAGTTAAATTGAAACCAAA+GGG - Chr3:78479733-78479752 None:intergenic 20.0%
!! AATAGATAAAGCTCAATTTA+CGG - Chr3:78485583-78485602 None:intergenic 20.0%
!! AGAACAAAAAATATATGTTG+TGG + Chr3:78485372-78485391 MsG0380016055.01.T01:intron 20.0%
!! AGAATTGCATTAAAAACAAA+AGG - Chr3:78479490-78479509 None:intergenic 20.0%
!! AGATATAAGTCTTAAGTTAA+TGG - Chr3:78480433-78480452 None:intergenic 20.0%
!! ATATTTAATTCTAGACTACA+TGG + Chr3:78482814-78482833 MsG0380016055.01.T01:intron 20.0%
!! ATTCATTCTTTAACTATTAC+TGG + Chr3:78483597-78483616 MsG0380016055.01.T01:intron 20.0%
!! GAATTATATATAACTCTAGT+CGG - Chr3:78483685-78483704 None:intergenic 20.0%
!! GCAACTAAAGAAAATTAAAA+GGG - Chr3:78484260-78484279 None:intergenic 20.0%
!! TAACAACTTATCAAATCAAA+GGG - Chr3:78481324-78481343 None:intergenic 20.0%
!! TAATGTCTTAAACTAATCAT+TGG + Chr3:78481946-78481965 MsG0380016055.01.T01:intron 20.0%
!! TCAAAATTGAAAACAAGAAA+AGG - Chr3:78479562-78479581 None:intergenic 20.0%
!! TGCAACTAAAGAAAATTAAA+AGG - Chr3:78484261-78484280 None:intergenic 20.0%
!! TTAACAACTTATCAAATCAA+AGG - Chr3:78481325-78481344 None:intergenic 20.0%
!!! AAAAAGAGAATATTTTGACT+AGG - Chr3:78479595-78479614 None:intergenic 20.0%
!!! AATGATTAGTTTAAGACATT+AGG - Chr3:78481947-78481966 None:intergenic 20.0%
!!! ACGGATTTTTTTAAAGATAA+TGG - Chr3:78482118-78482137 None:intergenic 20.0%
!!! AGTCTTTCATTTTAATGTAA+TGG + Chr3:78484557-78484576 MsG0380016055.01.T01:intron 20.0%
!!! ATAACATGTAATTGACTTTA+TGG - Chr3:78481297-78481316 None:intergenic 20.0%
!!! ATGATTAGTTTAAGACATTA+GGG - Chr3:78481946-78481965 None:intergenic 20.0%
!!! ATTCTATAAAGATTTTTAGG+TGG + Chr3:78481184-78481203 MsG0380016055.01.T01:intron 20.0%
!!! ATTTTATACCATGCATTATT+TGG + Chr3:78482239-78482258 MsG0380016055.01.T01:intron 20.0%
!!! GTTGATTTTTTTCTGAAAAT+CGG - Chr3:78483554-78483573 None:intergenic 20.0%
!!! GTTTTCAATTTTGATTGAAT+TGG + Chr3:78479568-78479587 MsG0380016055.01.T01:intron 20.0%
!!! TACCACTATTTTTAATATCA+TGG + Chr3:78482421-78482440 MsG0380016055.01.T01:intron 20.0%
!!! TATTTTACTTTGTCAATTTC+AGG + Chr3:78485661-78485680 MsG0380016055.01.T01:intron 20.0%
!!! TCAGGTTTATTTTTAGTTTA+AGG + Chr3:78485173-78485192 MsG0380016055.01.T01:intron 20.0%
!!! TCTTAAACTTTTAGTAGAAT+TGG + Chr3:78485076-78485095 MsG0380016055.01.T01:intron 20.0%
!!! TTGTTATTATTTTGGTTCAT+TGG + Chr3:78484056-78484075 MsG0380016055.01.T01:intron 20.0%
!!! TTTCTTTGATTCCATTATTT+TGG - Chr3:78483075-78483094 None:intergenic 20.0%
! AAAAATCAACAATACTCACT+TGG + Chr3:78483564-78483583 MsG0380016055.01.T01:intron 25.0%
! AAAACTAATAACCATGACAT+TGG - Chr3:78481083-78481102 None:intergenic 25.0%
! AAAGAGCAAAGAGAATTAAT+TGG - Chr3:78479625-78479644 None:intergenic 25.0%
! AAATCAATGACATGTATTCA+TGG - Chr3:78486099-78486118 None:intergenic 25.0%
! AAATTTGAGAAAGTTCACTT+AGG + Chr3:78480227-78480246 MsG0380016055.01.T01:CDS 25.0%
! AACGTAAATTTCCATAGAAA+TGG - Chr3:78483511-78483530 None:intergenic 25.0%
! AATATCCTTGAAGTTATTGA+AGG + Chr3:78482632-78482651 MsG0380016055.01.T01:intron 25.0%
! ACATCTAATAAAGTCAAGAA+AGG + Chr3:78481629-78481648 MsG0380016055.01.T01:CDS 25.0%
! ATAATAGATTTCTTGGAACA+AGG + Chr3:78480162-78480181 MsG0380016055.01.T01:CDS 25.0%
! ATAGATAAAGCTCAATTTAC+GGG - Chr3:78485582-78485601 None:intergenic 25.0%
! ATATCCTTGAAGTTATTGAA+GGG + Chr3:78482633-78482652 MsG0380016055.01.T01:intron 25.0%
! ATGCACATAATGACTTAATA+TGG - Chr3:78481227-78481246 None:intergenic 25.0%
! ATTTGACGATTAAGACTTAA+AGG - Chr3:78481511-78481530 None:intergenic 25.0%
! CAAGTTTAATAACCCTTATA+TGG + Chr3:78485629-78485648 MsG0380016055.01.T01:intron 25.0%
! CACCATGATATTAAAAATAG+TGG - Chr3:78482426-78482445 None:intergenic 25.0%
! CATACACATAATAGATTTCT+TGG + Chr3:78480155-78480174 MsG0380016055.01.T01:CDS 25.0%
! CTGAAAGATTTCCAAAATAA+TGG + Chr3:78483061-78483080 MsG0380016055.01.T01:intron 25.0%
! CTTGACTTTATTAGATGTAT+CGG - Chr3:78481627-78481646 None:intergenic 25.0%
! GAATTACTGGTAAAACTTAT+TGG + Chr3:78483921-78483940 MsG0380016055.01.T01:intron 25.0%
! GGAAAAATAAATGCAAGTTA+CGG - Chr3:78481911-78481930 None:intergenic 25.0%
! GGTATATTCGTGAATTAATA+CGG + Chr3:78483168-78483187 MsG0380016055.01.T01:intron 25.0%
! GTTAAAGAATGAATCTCAAA+TGG - Chr3:78483591-78483610 None:intergenic 25.0%
! TAATATCATGGTGATATTAG+TGG + Chr3:78482433-78482452 MsG0380016055.01.T01:intron 25.0%
! TCAATTCTATCAAAATGTAC+CGG + Chr3:78482497-78482516 MsG0380016055.01.T01:intron 25.0%
! TCTGAGTGGTTATATTATAA+AGG - Chr3:78479650-78479669 None:intergenic 25.0%
! TGAAAAATTTGCCAAAATTG+TGG + Chr3:78482922-78482941 MsG0380016055.01.T01:intron 25.0%
! TGAATATCTGTGAAACATTT+GGG + Chr3:78479895-78479914 MsG0380016055.01.T01:CDS 25.0%
! TGATTATGTGGATAGTATAA+TGG + Chr3:78484606-78484625 MsG0380016055.01.T01:CDS 25.0%
! TGTAGTAACTAAAAATAGTG+TGG + Chr3:78480643-78480662 MsG0380016055.01.T01:intron 25.0%
! TGTATTTATTTATGTCGACA+GGG + Chr3:78483707-78483726 MsG0380016055.01.T01:intron 25.0%
! TTAAATTTCAATACGAGATG+AGG - Chr3:78482791-78482810 None:intergenic 25.0%
! TTAATGACATGTAAAACACA+CGG + Chr3:78485953-78485972 MsG0380016055.01.T01:three_prime_UTR 25.0%
! TTAATTTATCTCCCTCAATA+TGG + Chr3:78485905-78485924 MsG0380016055.01.T01:three_prime_UTR 25.0%
! TTACTATCATAATGCATTGA+TGG + Chr3:78481825-78481844 MsG0380016055.01.T01:intron 25.0%
! TTAGACTGCTTGAATATTTA+AGG + Chr3:78484949-78484968 MsG0380016055.01.T01:intron 25.0%
! TTGAATATCTGTGAAACATT+TGG + Chr3:78479894-78479913 MsG0380016055.01.T01:CDS 25.0%
! TTGGATTCAACAAAACATAA+AGG + Chr3:78485024-78485043 MsG0380016055.01.T01:intron 25.0%
! TTGTATTTATTTATGTCGAC+AGG + Chr3:78483706-78483725 MsG0380016055.01.T01:intron 25.0%
!! AAGTTTGTTTAAGACTATGT+TGG + Chr3:78485005-78485024 MsG0380016055.01.T01:intron 25.0%
!! AGACACAATATCAAAGATTT+TGG - Chr3:78485337-78485356 None:intergenic 25.0%
!! AGATTCACAGTAAAATTTTC+AGG + Chr3:78484524-78484543 MsG0380016055.01.T01:intron 25.0%
!! CTACTAAAAGTTTAAGATGT+TGG - Chr3:78485073-78485092 None:intergenic 25.0%
!! GAGGAGAAATTAAACATTTT+CGG - Chr3:78484924-78484943 None:intergenic 25.0%
!! GATTCACAGTAAAATTTTCA+GGG + Chr3:78484525-78484544 MsG0380016055.01.T01:intron 25.0%
!! GTTTTACATGTCATTAAAAG+TGG - Chr3:78485950-78485969 None:intergenic 25.0%
!! TAAAAGTTTAAGATGTTGGA+TGG - Chr3:78485069-78485088 None:intergenic 25.0%
!! TTTTTCTTAGGAAAGAAGAA+AGG + Chr3:78479993-78480012 MsG0380016055.01.T01:CDS 25.0%
!!! ATAATCTATCGATTTAATCC+TGG - Chr3:78484832-78484851 None:intergenic 25.0%
!!! ATTTTTAGTTTAAGGAAGAC+TGG + Chr3:78485181-78485200 MsG0380016055.01.T01:intron 25.0%
!!! CTTATTTTCACTTTTGATTC+AGG + Chr3:78479775-78479794 MsG0380016055.01.T01:intron 25.0%
!!! TCTTCTTCAAGTTTTGTTAA+AGG + Chr3:78480980-78480999 MsG0380016055.01.T01:intron 25.0%
!!! TGATTAGTTTAAGACATTAG+GGG - Chr3:78481945-78481964 None:intergenic 25.0%
!!! TTGCAATTTTTTCTGATACT+CGG + Chr3:78480345-78480364 MsG0380016055.01.T01:CDS 25.0%
!!! TTGTTTTCGGTTTTTTTCTT+AGG + Chr3:78479981-78480000 MsG0380016055.01.T01:CDS 25.0%
!!! TTTCATTTTAATGTAATGGC+AGG + Chr3:78484561-78484580 MsG0380016055.01.T01:intron 25.0%
!!! TTTTGATTTTGGCAGAATTT+TGG - Chr3:78483309-78483328 None:intergenic 25.0%
AAAAAAACCGAAAACAAGAC+AGG - Chr3:78479978-78479997 None:intergenic 30.0%
AAAAAAATCCGTACTGTACT+TGG + Chr3:78482126-78482145 MsG0380016055.01.T01:CDS 30.0%
AATAACCCTTATATGGTAGA+TGG + Chr3:78485636-78485655 MsG0380016055.01.T01:intron 30.0%
AATAAGCCATCTACCATATA+AGG - Chr3:78485645-78485664 None:intergenic 30.0%
AATTCATCAATATCTGTGTG+GGG + Chr3:78482205-78482224 MsG0380016055.01.T01:CDS 30.0%
AATTCTAGACTACATGGTAT+TGG + Chr3:78482820-78482839 MsG0380016055.01.T01:intron 30.0%
ACAATTCATCAATATCTGTG+TGG + Chr3:78482203-78482222 MsG0380016055.01.T01:CDS 30.0%
ACATTAGGGGAAAGTAAAAA+AGG - Chr3:78481932-78481951 None:intergenic 30.0%
AGAATATATCTCTCTTGGAA+AGG + Chr3:78484450-78484469 MsG0380016055.01.T01:CDS 30.0%
AGTCATTATGTGCATATGAT+TGG + Chr3:78481232-78481251 MsG0380016055.01.T01:intron 30.0%
ATAAACCTGATTCAGAAGTA+TGG - Chr3:78485163-78485182 None:intergenic 30.0%
ATAAGCCATCTACCATATAA+GGG - Chr3:78485644-78485663 None:intergenic 30.0%
ATAGAGACTACTAAAAAAGG+TGG + Chr3:78485514-78485533 MsG0380016055.01.T01:intron 30.0%
ATATTAGCTAACCTTGGAAA+TGG - Chr3:78484782-78484801 None:intergenic 30.0%
ATGTTCATGTTTAAAGGGAT+GGG + Chr3:78485549-78485568 MsG0380016055.01.T01:intron 30.0%
ATTATTGATCGTATTCGAGA+TGG + Chr3:78481707-78481726 MsG0380016055.01.T01:CDS 30.0%
ATTCTAGACTACATGGTATT+GGG + Chr3:78482821-78482840 MsG0380016055.01.T01:intron 30.0%
ATTTCAAAAACATGAGCAAG+GGG - Chr3:78481465-78481484 None:intergenic 30.0%
CAAAAACATAGTCAGCATAA+TGG + Chr3:78485981-78486000 MsG0380016055.01.T01:three_prime_UTR 30.0%
CAACATGACTATCTATATCA+TGG - Chr3:78480328-78480347 None:intergenic 30.0%
CAATTCATCAATATCTGTGT+GGG + Chr3:78482204-78482223 MsG0380016055.01.T01:CDS 30.0%
CATTTCAAAAACATGAGCAA+GGG - Chr3:78481466-78481485 None:intergenic 30.0%
CCAATAGAGACTACTAAAAA+AGG + Chr3:78485511-78485530 MsG0380016055.01.T01:intron 30.0%
CTAAAATGTATGTCTCTTCA+TGG + Chr3:78483100-78483119 MsG0380016055.01.T01:intron 30.0%
CTAATCTATTATTCTCCCTT+TGG + Chr3:78479715-78479734 MsG0380016055.01.T01:intron 30.0%
CTGAAGATCATCATTGAATT+TGG - Chr3:78485813-78485832 None:intergenic 30.0%
GATATTGTCAAACTTCAACA+TGG + Chr3:78484427-78484446 MsG0380016055.01.T01:CDS 30.0%
GCAAGATGTTCATGTTTAAA+GGG + Chr3:78485544-78485563 MsG0380016055.01.T01:intron 30.0%
GTAAATCAAATTTACCTGGA+GGG - Chr3:78480387-78480406 None:intergenic 30.0%
GTCTTAATCGTCAAATTAGT+TGG + Chr3:78481515-78481534 MsG0380016055.01.T01:intron 30.0%
GTCTTCTTTCATGATTGAAT+GGG + Chr3:78483147-78483166 MsG0380016055.01.T01:intron 30.0%
GTCTTGAAAGAAGTTGTTTA+AGG - Chr3:78483397-78483416 None:intergenic 30.0%
TAGATGTTGCATTGAATTAC+TGG + Chr3:78483908-78483927 MsG0380016055.01.T01:intron 30.0%
TATACCATGCATTATTTGGT+TGG + Chr3:78482243-78482262 MsG0380016055.01.T01:intron 30.0%
TATCCTTGAAGTTATTGAAG+GGG + Chr3:78482634-78482653 MsG0380016055.01.T01:intron 30.0%
TATTCCACTAGATAGGATAA+AGG + Chr3:78483361-78483380 MsG0380016055.01.T01:intron 30.0%
TCACTTAGGAGAATATGAAT+GGG + Chr3:78480241-78480260 MsG0380016055.01.T01:CDS 30.0%
TCGAGATGGAGTTATAAAAA+AGG + Chr3:78481721-78481740 MsG0380016055.01.T01:CDS 30.0%
TGCAAGATGTTCATGTTTAA+AGG + Chr3:78485543-78485562 MsG0380016055.01.T01:intron 30.0%
TGTCTTCTTTCATGATTGAA+TGG + Chr3:78483146-78483165 MsG0380016055.01.T01:intron 30.0%
TGTGTGTTTAGCTAAAGTTT+GGG - Chr3:78479396-78479415 None:intergenic 30.0%
TTATAGTCATTCTACATGAC+TGG + Chr3:78486043-78486062 MsG0380016055.01.T01:three_prime_UTR 30.0%
TTCAAGCAGTCTAATAAATG+AGG - Chr3:78484943-78484962 None:intergenic 30.0%
TTCACTTAGGAGAATATGAA+TGG + Chr3:78480240-78480259 MsG0380016055.01.T01:CDS 30.0%
TTGAAGAAGAAACAAACCTT+TGG - Chr3:78480970-78480989 None:intergenic 30.0%
TTGATGAAGTTGAGAAACTT+GGG + Chr3:78480863-78480882 MsG0380016055.01.T01:CDS 30.0%
TTGCAAATTGGCTATCAAAT+TGG - Chr3:78481878-78481897 None:intergenic 30.0%
TTGGAACAAGGAAACTAATA+GGG + Chr3:78480174-78480193 MsG0380016055.01.T01:CDS 30.0%
TTGTTTCCGACAGAATATAA+CGG + Chr3:78480504-78480523 MsG0380016055.01.T01:CDS 30.0%
TTTATCCTATCTAGTGGAAT+AGG - Chr3:78483362-78483381 None:intergenic 30.0%
TTTGATGAAGTTGAGAAACT+TGG + Chr3:78480862-78480881 MsG0380016055.01.T01:CDS 30.0%
! AAAAGTATAAGCAACTCAAG+AGG - Chr3:78482330-78482349 None:intergenic 30.0%
! AAATGTTTTGTCCAATGTCA+TGG + Chr3:78481069-78481088 MsG0380016055.01.T01:intron 30.0%
! ATTCAAACTTTTCAACCATG+AGG - Chr3:78479880-78479899 None:intergenic 30.0%
! GTCTTGTTAGATATCTAGAT+AGG + Chr3:78481847-78481866 MsG0380016055.01.T01:intron 30.0%
! TAAAACTGATGAAGTGTTCA+AGG + Chr3:78484197-78484216 MsG0380016055.01.T01:CDS 30.0%
! TCCAGGTAAATTTGATTTAC+CGG + Chr3:78480387-78480406 MsG0380016055.01.T01:intron 30.0%
! TGTTCATATTTGTGATTTGC+TGG + Chr3:78481037-78481056 MsG0380016055.01.T01:intron 30.0%
! TTTTCCTTTATCCTATCTAG+TGG - Chr3:78483368-78483387 None:intergenic 30.0%
!! ACAATATCAAAGATTTTGGC+TGG - Chr3:78485333-78485352 None:intergenic 30.0%
!! ATAGTGTTTGCTATAGTCAT+AGG + Chr3:78479942-78479961 MsG0380016055.01.T01:CDS 30.0%
!! GAATTTGTTACATCAAGTGA+TGG + Chr3:78480200-78480219 MsG0380016055.01.T01:CDS 30.0%
!! TTTAGCTAAAGTTTGGGTTT+TGG - Chr3:78479390-78479409 None:intergenic 30.0%
!!! CCTTTTTTAGTAGTCTCTAT+TGG - Chr3:78485514-78485533 None:intergenic 30.0%
!!! TAGTTTTGTCAAACACAACA+TGG + Chr3:78479836-78479855 MsG0380016055.01.T01:exon 30.0%
!!! TGCAATTTTTTCTGATACTC+GGG + Chr3:78480346-78480365 MsG0380016055.01.T01:CDS 30.0%
AAAATGACAGAAACTCATCC+CGG + Chr3:78485464-78485483 MsG0380016055.01.T01:intron 35.0%
AAAGTCAAGAAAGGAACCAA+GGG + Chr3:78481638-78481657 MsG0380016055.01.T01:CDS 35.0%
AACAACTTCAGCTTGTGAAT+TGG - Chr3:78482869-78482888 None:intergenic 35.0%
AACAAGGAAACTAATAGGGA+AGG + Chr3:78480178-78480197 MsG0380016055.01.T01:CDS 35.0%
AACTTCTTTCAAGACTCATG+AGG + Chr3:78483402-78483421 MsG0380016055.01.T01:intron 35.0%
AAGAAGAAAGGTAAAGTACG+TGG + Chr3:78480005-78480024 MsG0380016055.01.T01:CDS 35.0%
AAGAAGACCAGATGCAAAAT+TGG - Chr3:78480297-78480316 None:intergenic 35.0%
AATTACAGGTCATAGCTCAA+AGG - Chr3:78482533-78482552 None:intergenic 35.0%
AATTTCAATACGAGATGAGG+TGG - Chr3:78482788-78482807 None:intergenic 35.0%
ACAGACTATCGACAGTATTT+CGG + Chr3:78482595-78482614 MsG0380016055.01.T01:intron 35.0%
ACAGATAGTACATTGACATG+AGG - Chr3:78485860-78485879 None:intergenic 35.0%
ACAGATCAGAGTAGATACTT+GGG - Chr3:78480704-78480723 None:intergenic 35.0%
AGATGCTCAAACCATTTCTA+TGG + Chr3:78483497-78483516 MsG0380016055.01.T01:intron 35.0%
AGTTCCAACCAAATAATGCA+TGG - Chr3:78482250-78482269 None:intergenic 35.0%
ATAAAGAACCACATACCACA+TGG - Chr3:78483254-78483273 None:intergenic 35.0%
ATCCACATATTAGCTAACCT+TGG - Chr3:78484788-78484807 None:intergenic 35.0%
ATGACTGTGATTCCAAATCT+GGG + Chr3:78481411-78481430 MsG0380016055.01.T01:CDS 35.0%
ATGAGATTAGATGTGAGTGT+AGG + Chr3:78485439-78485458 MsG0380016055.01.T01:intron 35.0%
ATTCACAAGCTGAAGTTGTT+CGG + Chr3:78482869-78482888 MsG0380016055.01.T01:intron 35.0%
ATTTGAGGGTGGATAGAATA+TGG - Chr3:78485209-78485228 None:intergenic 35.0%
CAAGTCATCAACCATATTGA+GGG - Chr3:78485919-78485938 None:intergenic 35.0%
CATACCTTAATGTAGCAACA+AGG - Chr3:78483831-78483850 None:intergenic 35.0%
CATGGAGAATATATCTCTCT+TGG + Chr3:78484445-78484464 MsG0380016055.01.T01:CDS 35.0%
CCATTTCAAAAACATGAGCA+AGG - Chr3:78481467-78481486 None:intergenic 35.0%
CGAATACGATCAATAATAGC+TGG - Chr3:78481704-78481723 None:intergenic 35.0%
CTATTTATGAGCCTCAAATG+GGG + Chr3:78484021-78484040 MsG0380016055.01.T01:intron 35.0%
CTTGGAACAAGGAAACTAAT+AGG + Chr3:78480173-78480192 MsG0380016055.01.T01:CDS 35.0%
GAATATGAATGGGAAACCTA+TGG + Chr3:78480251-78480270 MsG0380016055.01.T01:CDS 35.0%
GAGCAAAGAGAATTAATTGG+AGG - Chr3:78479622-78479641 None:intergenic 35.0%
GATGAATTGTTGTGAATCTC+CGG - Chr3:78482193-78482212 None:intergenic 35.0%
GATGCAATGTGTAGTTCAAA+AGG - Chr3:78483451-78483470 None:intergenic 35.0%
GATGTTCATGTTTAAAGGGA+TGG + Chr3:78485548-78485567 MsG0380016055.01.T01:intron 35.0%
GCATTATAGGGATGAAATAG+AGG + Chr3:78485242-78485261 MsG0380016055.01.T01:intron 35.0%
GCTATTTATGAGCCTCAAAT+GGG + Chr3:78484020-78484039 MsG0380016055.01.T01:intron 35.0%
GGCAATTAGTGATTGCAAAT+TGG - Chr3:78481890-78481909 None:intergenic 35.0%
GGTAAATCAAATTTACCTGG+AGG - Chr3:78480388-78480407 None:intergenic 35.0%
GTATTCGATACCAGTTTCTT+GGG - Chr3:78484704-78484723 None:intergenic 35.0%
GTCACTATTTATGCTTCTCT+AGG + Chr3:78480529-78480548 MsG0380016055.01.T01:CDS 35.0%
GTGTGTGTTTAGCTAAAGTT+TGG - Chr3:78479397-78479416 None:intergenic 35.0%
TAAAACAGTAACATCTCCCT+TGG - Chr3:78481657-78481676 None:intergenic 35.0%
TAAAGTCAAGAAAGGAACCA+AGG + Chr3:78481637-78481656 MsG0380016055.01.T01:CDS 35.0%
TAATGCTCGATATTCTGAGT+TGG + Chr3:78480070-78480089 MsG0380016055.01.T01:CDS 35.0%
TACAACACCTTTAGTGTGTT+GGG + Chr3:78482996-78483015 MsG0380016055.01.T01:intron 35.0%
TACGTTCTATAGTAAGCATC+TGG - Chr3:78481114-78481133 None:intergenic 35.0%
TAGCATTTCATCGTAACCAA+AGG + Chr3:78479443-78479462 MsG0380016055.01.T01:five_prime_UTR 35.0%
TAGGAACTATGAGAAAAGAG+AGG - Chr3:78483343-78483362 None:intergenic 35.0%
TAGTTCCTATTCCACTAGAT+AGG + Chr3:78483354-78483373 MsG0380016055.01.T01:intron 35.0%
TATGACTGTGATTCCAAATC+TGG + Chr3:78481410-78481429 MsG0380016055.01.T01:CDS 35.0%
TATTTATGAGCCTCAAATGG+GGG + Chr3:78484022-78484041 MsG0380016055.01.T01:intron 35.0%
TCAAATAAATGAGCCATGGT+TGG - Chr3:78480119-78480138 None:intergenic 35.0%
TCAAGTCATCAACCATATTG+AGG - Chr3:78485920-78485939 None:intergenic 35.0%
TCTTAGCTATCAATGTCAGT+AGG - Chr3:78481268-78481287 None:intergenic 35.0%
TGCAATCTGGAAAAGATTCT+TGG - Chr3:78482022-78482041 None:intergenic 35.0%
TGTATGTATCTGAATCTGAG+TGG - Chr3:78479664-78479683 None:intergenic 35.0%
TGTATTCGATACCAGTTTCT+TGG - Chr3:78484705-78484724 None:intergenic 35.0%
TGTGTGTATGCATATGTAGT+TGG + Chr3:78482293-78482312 MsG0380016055.01.T01:intron 35.0%
TTCTAGACTACATGGTATTG+GGG + Chr3:78482822-78482841 MsG0380016055.01.T01:intron 35.0%
TTGAAAGATCATGGAGAACT+TGG + Chr3:78479918-78479937 MsG0380016055.01.T01:CDS 35.0%
TTGCTCAAATAAATGAGCCA+TGG - Chr3:78480123-78480142 None:intergenic 35.0%
TTTAATGTAATGGCAGGTTG+AGG + Chr3:78484567-78484586 MsG0380016055.01.T01:intron 35.0%
TTTGAGGGTGGATAGAATAT+GGG - Chr3:78485208-78485227 None:intergenic 35.0%
! AAGTTTAAGATGTTGGATGG+AGG - Chr3:78485066-78485085 None:intergenic 35.0%
! ATTTTGTCTTCCTGACTCTT+AGG + Chr3:78481975-78481994 MsG0380016055.01.T01:intron 35.0%
! GTCTGTTTGACTCTATTTTG+AGG - Chr3:78482581-78482600 None:intergenic 35.0%
! TACTGACATTGATAGCTAAG+AGG + Chr3:78481267-78481286 MsG0380016055.01.T01:intron 35.0%
! TGCTATTTATGAGCCTCAAA+TGG + Chr3:78484019-78484038 MsG0380016055.01.T01:intron 35.0%
! TTCCAAGGTTAGCTAATATG+TGG + Chr3:78484783-78484802 MsG0380016055.01.T01:intron 35.0%
! TTGTGAATTGGCTCATAACA+TGG - Chr3:78482857-78482876 None:intergenic 35.0%
!! ACATTTGGGTTGAAAGATCA+TGG + Chr3:78479909-78479928 MsG0380016055.01.T01:CDS 35.0%
!! ACTTGCTATGCTATACTTCA+GGG + Chr3:78480481-78480500 MsG0380016055.01.T01:intron 35.0%
!! AGTTATTTCTCTCAACCATG+TGG + Chr3:78483236-78483255 MsG0380016055.01.T01:intron 35.0%
!! CACAACATAGGCTTTTGAAA+TGG - Chr3:78482688-78482707 None:intergenic 35.0%
!! CCTTGCTCATGTTTTTGAAA+TGG + Chr3:78481464-78481483 MsG0380016055.01.T01:CDS 35.0%
!! GGTTGTATAGCTTGTTTCAT+GGG + Chr3:78484077-78484096 MsG0380016055.01.T01:intron 35.0%
!! GGTTTTATACTGGTGACATT+GGG + Chr3:78484359-78484378 MsG0380016055.01.T01:CDS 35.0%
!! GTGATTTTTCAACTTGGTAC+AGG + Chr3:78484315-78484334 MsG0380016055.01.T01:intron 35.0%
!! TACTTGCTATGCTATACTTC+AGG + Chr3:78480480-78480499 MsG0380016055.01.T01:intron 35.0%
!! TAGCACGTGATTTTTCAACT+TGG + Chr3:78484309-78484328 MsG0380016055.01.T01:intron 35.0%
!! TGGTTGTATAGCTTGTTTCA+TGG + Chr3:78484076-78484095 MsG0380016055.01.T01:intron 35.0%
!!! ACATAGGCTTTTGAAATGGT+TGG - Chr3:78482684-78482703 None:intergenic 35.0%
!!! CATTGTTCCTGTCTTGTTTT+CGG + Chr3:78479968-78479987 MsG0380016055.01.T01:CDS 35.0%
!!! TATTTTGAGGTACTCTAACC+TGG - Chr3:78482568-78482587 None:intergenic 35.0%
!!! TGGTTTTATACTGGTGACAT+TGG + Chr3:78484358-78484377 MsG0380016055.01.T01:CDS 35.0%
AAAATCCGTACTGTACTTGG+AGG + Chr3:78482129-78482148 MsG0380016055.01.T01:CDS 40.0%
AAACCATATCCTTGCCCAAT+AGG - Chr3:78483735-78483754 None:intergenic 40.0%
AACAAAAGGATTCTCTGTCG+TGG - Chr3:78479476-78479495 None:intergenic 40.0%
AACCTCCGATTTATGCTTTG+TGG + Chr3:78482153-78482172 MsG0380016055.01.T01:CDS 40.0%
AACTCTAGTCGGACAAAAAG+AGG - Chr3:78483674-78483693 None:intergenic 40.0%
ACTCTTAGGTGGAGGAAAAA+GGG + Chr3:78481989-78482008 MsG0380016055.01.T01:intron 40.0%
AGCAACACAGTAACTGTGAA+AGG - Chr3:78484644-78484663 None:intergenic 40.0%
AGCGGCTAAATAACTGATTG+TGG - Chr3:78482954-78482973 None:intergenic 40.0%
ATGACTCAACGAAATGAAGC+CGG - Chr3:78480409-78480428 None:intergenic 40.0%
ATGCCGTCTCTAAATTACTC+TGG + Chr3:78481538-78481557 MsG0380016055.01.T01:intron 40.0%
ATGTATACAAGTGGCAGTAC+AGG + Chr3:78480940-78480959 MsG0380016055.01.T01:CDS 40.0%
ATTTATGAGCCTCAAATGGG+GGG + Chr3:78484023-78484042 MsG0380016055.01.T01:intron 40.0%
CAACACAGTAACTGTGAAAG+GGG - Chr3:78484642-78484661 None:intergenic 40.0%
CACAACATGGTTGATCCAAA+CGG + Chr3:78479849-78479868 MsG0380016055.01.T01:exon 40.0%
CACAGATCAGAGTAGATACT+TGG - Chr3:78480705-78480724 None:intergenic 40.0%
CAGAAATAGACGAATAACGC+TGG - Chr3:78482475-78482494 None:intergenic 40.0%
CAGACTATCGACAGTATTTC+GGG + Chr3:78482596-78482615 MsG0380016055.01.T01:intron 40.0%
CAGCCAGAGTAATTTAGAGA+CGG - Chr3:78481544-78481563 None:intergenic 40.0%
CAGCGTTATTCGTCTATTTC+TGG + Chr3:78482473-78482492 MsG0380016055.01.T01:intron 40.0%
CATGAGAGACTAGAAAGAGA+AGG - Chr3:78483473-78483492 None:intergenic 40.0%
CCATTCATGTAGCACAACAT+AGG - Chr3:78482700-78482719 None:intergenic 40.0%
CCTATGTTGTGCTACATGAA+TGG + Chr3:78482697-78482716 MsG0380016055.01.T01:intron 40.0%
CGAAATCATCGATAGGAAGA+AGG + Chr3:78484405-78484424 MsG0380016055.01.T01:CDS 40.0%
CGCAGATGAAAATGTTGATG+TGG - Chr3:78481760-78481779 None:intergenic 40.0%
CGGCTAAATAACTGATTGTG+GGG - Chr3:78482952-78482971 None:intergenic 40.0%
CGTAAAGCTGCTGAATAAGT+TGG + Chr3:78480726-78480745 MsG0380016055.01.T01:CDS 40.0%
CTTGAAGTTATTGAAGGGGT+GGG + Chr3:78482638-78482657 MsG0380016055.01.T01:intron 40.0%
GCAACACAGTAACTGTGAAA+GGG - Chr3:78484643-78484662 None:intergenic 40.0%
GCAGTAACTAATCCAGATTC+AGG - Chr3:78485758-78485777 None:intergenic 40.0%
GCAGTTGTCATGTATACAAG+TGG + Chr3:78480931-78480950 MsG0380016055.01.T01:CDS 40.0%
GCCGGTAAATCAAATTTACC+TGG - Chr3:78480391-78480410 None:intergenic 40.0%
GCGGCTAAATAACTGATTGT+GGG - Chr3:78482953-78482972 None:intergenic 40.0%
GGCTAAATAACTGATTGTGG+GGG - Chr3:78482951-78482970 None:intergenic 40.0%
GTACAACACCTTTAGTGTGT+TGG + Chr3:78482995-78483014 MsG0380016055.01.T01:intron 40.0%
GTCAATGTACTATCTGTTGC+AGG + Chr3:78485863-78485882 MsG0380016055.01.T01:three_prime_UTR 40.0%
GTGGATAGTTACTTGTTTGC+TGG + Chr3:78484802-78484821 MsG0380016055.01.T01:intron 40.0%
GTTTGACCGAAACATTTGCT+GGG + Chr3:78483751-78483770 MsG0380016055.01.T01:CDS 40.0%
TATTTATGCTTCTCTAGGCG+AGG + Chr3:78480534-78480553 MsG0380016055.01.T01:CDS 40.0%
TCCTGCAAAGATTAAGCTGT+TGG + Chr3:78485718-78485737 MsG0380016055.01.T01:CDS 40.0%
TCGGCGTCTTAATTTAAGTG+TGG - Chr3:78484905-78484924 None:intergenic 40.0%
TCTTCCTATCGATGATTTCG+AGG - Chr3:78484405-78484424 None:intergenic 40.0%
TCTTGACCATTAGGTCATTG+CGG - Chr3:78485122-78485141 None:intergenic 40.0%
TCTTTCAGAGTCATATCCCT+AGG - Chr3:78483049-78483068 None:intergenic 40.0%
TGACGACCGTTATATTCTGT+CGG - Chr3:78480513-78480532 None:intergenic 40.0%
TGATCACTCTCTTGACCATT+AGG - Chr3:78485131-78485150 None:intergenic 40.0%
TGCAAAGATTAAGCTGTTGG+CGG + Chr3:78485721-78485740 MsG0380016055.01.T01:CDS 40.0%
TGTGGATAAGAATGCTGATG+TGG + Chr3:78485390-78485409 MsG0380016055.01.T01:intron 40.0%
TGTTGTGAATCTCCGGATAA+AGG - Chr3:78482186-78482205 None:intergenic 40.0%
TTAATGTAGCAACAAGGCAG+AGG - Chr3:78483825-78483844 None:intergenic 40.0%
TTCTGTAAAGAGAGAGAGAG+AGG + Chr3:78482365-78482384 MsG0380016055.01.T01:intron 40.0%
TTGAAGTTATTGAAGGGGTG+GGG + Chr3:78482639-78482658 MsG0380016055.01.T01:intron 40.0%
TTGGTTGAAGTTCCTTGGAA+AGG + Chr3:78480089-78480108 MsG0380016055.01.T01:CDS 40.0%
TTGTTACATCAAGTGATGGC+AGG + Chr3:78480204-78480223 MsG0380016055.01.T01:CDS 40.0%
TTGTTTCATGGGAAGAAGGA+GGG + Chr3:78484088-78484107 MsG0380016055.01.T01:CDS 40.0%
! CTGATTCAGAAGTATGGATG+CGG - Chr3:78485157-78485176 None:intergenic 40.0%
! CTTTGAAGACGATAGCAAAG+AGG + Chr3:78480792-78480811 MsG0380016055.01.T01:CDS 40.0%
! GATGTATCGGTCAAAGTCAT+AGG - Chr3:78481614-78481633 None:intergenic 40.0%
! GCATCTGGTCTTCTTAAGTT+AGG + Chr3:78480302-78480321 MsG0380016055.01.T01:CDS 40.0%
! TAGGGTGTCATGATTACTCA+CGG + Chr3:78481360-78481379 MsG0380016055.01.T01:intron 40.0%
! TCTAGACTACATGGTATTGG+GGG + Chr3:78482823-78482842 MsG0380016055.01.T01:intron 40.0%
! TCTGCCTTGTTGCTACATTA+AGG + Chr3:78483824-78483843 MsG0380016055.01.T01:CDS 40.0%
! TGAAGCGCTCTTGCATTATA+GGG + Chr3:78485230-78485249 MsG0380016055.01.T01:intron 40.0%
! TTGAAGCGCTCTTGCATTAT+AGG + Chr3:78485229-78485248 MsG0380016055.01.T01:intron 40.0%
! TTTGACCGAAACATTTGCTG+GGG + Chr3:78483752-78483771 MsG0380016055.01.T01:CDS 40.0%
!! ACACTAAAGGTGTTGTACCA+GGG - Chr3:78482993-78483012 None:intergenic 40.0%
!! AGAAGGAGGGTATCTATCAT+CGG + Chr3:78484101-78484120 MsG0380016055.01.T01:CDS 40.0%
!! CAAGAGCGCTTCAAATTTGA+GGG - Chr3:78485223-78485242 None:intergenic 40.0%
!! TAGCTTGTTTCATGGGAAGA+AGG + Chr3:78484084-78484103 MsG0380016055.01.T01:intron 40.0%
!! TCAGGTTTGTTACAGAGATC+AGG - Chr3:78484736-78484755 None:intergenic 40.0%
!! TCGAGAACTGACTTTTGTCT+TGG + Chr3:78481152-78481171 MsG0380016055.01.T01:intron 40.0%
!! TTGGTACAGGTTGATGAGAA+AGG + Chr3:78484328-78484347 MsG0380016055.01.T01:intron 40.0%
!!! GAGGAACAAGCTTTTTCAGA+AGG + Chr3:78480811-78480830 MsG0380016055.01.T01:CDS 40.0%
!!! TGTTTTTGAAATGGCAGCAG+AGG + Chr3:78481473-78481492 MsG0380016055.01.T01:CDS 40.0%
AACCATGAGGAACTACCGTT+TGG - Chr3:78479867-78479886 None:intergenic 45.0%
AAGAACTTCCTACCTCGTTC+AGG - Chr3:78480576-78480595 None:intergenic 45.0%
AATCCAGATTCAGGTGTCCA+TGG - Chr3:78485749-78485768 None:intergenic 45.0%
ACTCGCGTCATGTGATTATG+TGG + Chr3:78484594-78484613 MsG0380016055.01.T01:CDS 45.0%
ACTGCAACAGCATTCTTGGA+AGG - Chr3:78480916-78480935 None:intergenic 45.0%
AGAACTTCCTACCTCGTTCA+GGG - Chr3:78480575-78480594 None:intergenic 45.0%
AGGTAAAGTACGTGGTGTTC+CGG + Chr3:78480013-78480032 MsG0380016055.01.T01:CDS 45.0%
ATCAAATTCCCCCCCATTTG+AGG - Chr3:78484035-78484054 None:intergenic 45.0%
ATCCAAACGGTAGTTCCTCA+TGG + Chr3:78479862-78479881 MsG0380016055.01.T01:CDS 45.0%
CCACCCCTTCAATAACTTCA+AGG - Chr3:78482640-78482659 None:intergenic 45.0%
CCTTGAAGTTATTGAAGGGG+TGG + Chr3:78482637-78482656 MsG0380016055.01.T01:intron 45.0%
CGCATCCATACTTCTGAATC+AGG + Chr3:78485155-78485174 MsG0380016055.01.T01:intron 45.0%
CTCCGATTTATGCTTTGTGG+CGG + Chr3:78482156-78482175 MsG0380016055.01.T01:CDS 45.0%
CTCCGCCACAAAGCATAAAT+CGG - Chr3:78482161-78482180 None:intergenic 45.0%
CTCTTAGGTGGAGGAAAAAG+GGG + Chr3:78481990-78482009 MsG0380016055.01.T01:intron 45.0%
CTGTCGTGGAACAATACCTT+TGG - Chr3:78479462-78479481 None:intergenic 45.0%
CTTGTTTCATGGGAAGAAGG+AGG + Chr3:78484087-78484106 MsG0380016055.01.T01:CDS 45.0%
GACAACTGCAACAGCATTCT+TGG - Chr3:78480920-78480939 None:intergenic 45.0%
GACCTGTAATTTCACACGTG+AGG + Chr3:78482542-78482561 MsG0380016055.01.T01:intron 45.0%
GACTCTTAGGTGGAGGAAAA+AGG + Chr3:78481988-78482007 MsG0380016055.01.T01:intron 45.0%
GATTCACCACTAACTTCCAC+CGG - Chr3:78480035-78480054 None:intergenic 45.0%
GATTCCAAATCTGGGTAGCA+AGG + Chr3:78481419-78481438 MsG0380016055.01.T01:CDS 45.0%
GCATTCTTGGAAGGTAAGCT+TGG - Chr3:78480907-78480926 None:intergenic 45.0%
GCCAACAGCTTAATCTTTGC+AGG - Chr3:78485722-78485741 None:intergenic 45.0%
GGATGGAGGTTGTGTAATGA+TGG - Chr3:78485052-78485071 None:intergenic 45.0%
GGTGGAAGTTAGTGGTGAAT+CGG + Chr3:78480034-78480053 MsG0380016055.01.T01:CDS 45.0%
GGTTTGACCGAAACATTTGC+TGG + Chr3:78483750-78483769 MsG0380016055.01.T01:CDS 45.0%
GTAAAGAGAGAGAGAGAGGA+CGG + Chr3:78482369-78482388 MsG0380016055.01.T01:intron 45.0%
GTGGAAGTTAGTGGTGAATC+GGG + Chr3:78480035-78480054 MsG0380016055.01.T01:CDS 45.0%
TAGTCGGACAAAAAGAGGTG+TGG - Chr3:78483669-78483688 None:intergenic 45.0%
TCACCATGTGAGCTAATCAC+CGG - Chr3:78485486-78485505 None:intergenic 45.0%
TCTCTCAACCATGTGGTATG+TGG + Chr3:78483243-78483262 MsG0380016055.01.T01:intron 45.0%
TCTTAGGTGGAGGAAAAAGG+GGG + Chr3:78481991-78482010 MsG0380016055.01.T01:intron 45.0%
TTCAGAGTCATATCCCTAGG+CGG - Chr3:78483046-78483065 None:intergenic 45.0%
TTGTCTTCCTGACTCTTAGG+TGG + Chr3:78481978-78481997 MsG0380016055.01.T01:intron 45.0%
TTTATGAGCCTCAAATGGGG+GGG + Chr3:78484024-78484043 MsG0380016055.01.T01:intron 45.0%
! AAAACCCACCCTTTTGACAG+CGG + Chr3:78481676-78481695 MsG0380016055.01.T01:CDS 45.0%
! ACCTTTAGTGTGTTGGGTTG+AGG + Chr3:78483002-78483021 MsG0380016055.01.T01:intron 45.0%
! ACGTCAGTCTCTGGAAAAGT+GGG + Chr3:78484678-78484697 MsG0380016055.01.T01:CDS 45.0%
! AGGGTGTCATGATTACTCAC+GGG + Chr3:78481361-78481380 MsG0380016055.01.T01:intron 45.0%
! GCAGGTGTTGCAATTGGTTA+CGG + Chr3:78481584-78481603 MsG0380016055.01.T01:CDS 45.0%
! TACTTGTTTGCTGGCTATCC+AGG + Chr3:78484811-78484830 MsG0380016055.01.T01:intron 45.0%
! TGATTAGCTCACATGGTGAG+AGG + Chr3:78485487-78485506 MsG0380016055.01.T01:intron 45.0%
! TTCCTTTTACAGCAGCCAGT+CGG - Chr3:78482053-78482072 None:intergenic 45.0%
! TTTTAGTCTCACACCGCCTA+GGG + Chr3:78483030-78483049 MsG0380016055.01.T01:intron 45.0%
! TTTTCCTCCACCTAAGAGTC+AGG - Chr3:78481988-78482007 None:intergenic 45.0%
!! CACACTAAAGGTGTTGTACC+AGG - Chr3:78482994-78483013 None:intergenic 45.0%
!! CCTTTAGTGTGTTGGGTTGA+GGG + Chr3:78483003-78483022 MsG0380016055.01.T01:intron 45.0%
!! CTACATGGTATTGGGGGTTT+TGG + Chr3:78482829-78482848 MsG0380016055.01.T01:intron 45.0%
!! CTGAGTTGGTTGAAGTTCCT+TGG + Chr3:78480084-78480103 MsG0380016055.01.T01:CDS 45.0%
!! CTTTAGTGTGTTGGGTTGAG+GGG + Chr3:78483004-78483023 MsG0380016055.01.T01:intron 45.0%
!! GCAAGAGCGCTTCAAATTTG+AGG - Chr3:78485224-78485243 None:intergenic 45.0%
!! GTCGTGATTCTAGAACGACA+AGG - Chr3:78484490-78484509 None:intergenic 45.0%
ACACACACACACACACACGT+TGG + Chr3:78479409-78479428 MsG0380016055.01.T01:five_prime_UTR 50.0%
ACGTCCTTGCTACCCAGATT+TGG - Chr3:78481426-78481445 None:intergenic 50.0%
AGAACCTCAGTGACAGCTTC+AGG - Chr3:78484754-78484773 None:intergenic 50.0%
AGCTGGTACCGCTGTCAAAA+GGG - Chr3:78481687-78481706 None:intergenic 50.0%
AGTCATAACAGCTGCTGTGG+TGG - Chr3:78481397-78481416 None:intergenic 50.0%
ATGGTTGGAGCTCCTTTCCA+AGG - Chr3:78480104-78480123 None:intergenic 50.0%
ATGTAGCAACAAGGCAGAGG+TGG - Chr3:78483822-78483841 None:intergenic 50.0%
ATGTCGACAGGGCTCCTATT+GGG + Chr3:78483718-78483737 MsG0380016055.01.T01:intron 50.0%
ATTCACTCCCTGAACGAGGT+AGG + Chr3:78480565-78480584 MsG0380016055.01.T01:intron 50.0%
ATTGGGCGATTCCATCCTGA+TGG + Chr3:78484376-78484395 MsG0380016055.01.T01:CDS 50.0%
CAAACCTGAAGCTGTCACTG+AGG + Chr3:78484747-78484766 MsG0380016055.01.T01:CDS 50.0%
CACAGTCATAACAGCTGCTG+TGG - Chr3:78481400-78481419 None:intergenic 50.0%
CACCATGTGAGCTAATCACC+GGG - Chr3:78485485-78485504 None:intergenic 50.0%
CCCTCAACCCAACACACTAA+AGG - Chr3:78483006-78483025 None:intergenic 50.0%
CGCCACAAAGCATAAATCGG+AGG - Chr3:78482158-78482177 None:intergenic 50.0%
CTTGAGCCGCAATGACCTAA+TGG + Chr3:78485113-78485132 MsG0380016055.01.T01:intron 50.0%
GAAAAGTGGGCCCAAGAAAC+TGG + Chr3:78484691-78484710 MsG0380016055.01.T01:CDS 50.0%
GAGCGCTTCAAATTTGAGGG+TGG - Chr3:78485220-78485239 None:intergenic 50.0%
GATCCATGGACACCTGAATC+TGG + Chr3:78485743-78485762 MsG0380016055.01.T01:CDS 50.0%
GCGAGCAAAGACTTCTCCAT+AGG - Chr3:78480270-78480289 None:intergenic 50.0%
GCGGCTCAAGTAACATGTCA+AGG - Chr3:78485103-78485122 None:intergenic 50.0%
GCTCCTATTGGGCAAGGATA+TGG + Chr3:78483729-78483748 MsG0380016055.01.T01:CDS 50.0%
GCTGTAAAAGGAAGCTGGCT+AGG + Chr3:78482060-78482079 MsG0380016055.01.T01:CDS 50.0%
GGCAATGAAGGCAGACTAAG+CGG - Chr3:78482972-78482991 None:intergenic 50.0%
GGCCTCACGTGTGAAATTAC+AGG - Chr3:78482547-78482566 None:intergenic 50.0%
GGTGCCTCGAAATCATCGAT+AGG + Chr3:78484398-78484417 MsG0380016055.01.T01:CDS 50.0%
GGTTCTGCAGTCCATTTCCA+AGG + Chr3:78484768-78484787 MsG0380016055.01.T01:CDS 50.0%
GGTTGCCTCCAAGTACAGTA+CGG - Chr3:78482137-78482156 None:intergenic 50.0%
GTAATTTCACACGTGAGGCC+AGG + Chr3:78482547-78482566 MsG0380016055.01.T01:intron 50.0%
GTGTTGTACCAGGGCAATGA+AGG - Chr3:78482984-78483003 None:intergenic 50.0%
TAAAGTACGTGGTGTTCCGG+TGG + Chr3:78480016-78480035 MsG0380016055.01.T01:CDS 50.0%
TAGCTGGTACCGCTGTCAAA+AGG - Chr3:78481688-78481707 None:intergenic 50.0%
TATGTCGACAGGGCTCCTAT+TGG + Chr3:78483717-78483736 MsG0380016055.01.T01:intron 50.0%
TCAACCCACAAAGCTCTTGC+AGG - Chr3:78482745-78482764 None:intergenic 50.0%
TCTGATTCACTCCCTGAACG+AGG + Chr3:78480561-78480580 MsG0380016055.01.T01:CDS 50.0%
TCTTCCTGACTCTTAGGTGG+AGG + Chr3:78481981-78482000 MsG0380016055.01.T01:intron 50.0%
TGGCTGCTGTAAAAGGAAGC+TGG + Chr3:78482055-78482074 MsG0380016055.01.T01:CDS 50.0%
TGTAGCAACAAGGCAGAGGT+GGG - Chr3:78483821-78483840 None:intergenic 50.0%
TTAGTCTGCCTTCATTGCCC+TGG + Chr3:78482973-78482992 MsG0380016055.01.T01:intron 50.0%
TTGGAAAGGAGCTCCAACCA+TGG + Chr3:78480103-78480122 MsG0380016055.01.T01:CDS 50.0%
TTGGGCGATTCCATCCTGAT+GGG + Chr3:78484377-78484396 MsG0380016055.01.T01:CDS 50.0%
TTTCTGATACTCGGGCTGAG+TGG + Chr3:78480354-78480373 MsG0380016055.01.T01:CDS 50.0%
! AGCTGAAGTTGTTCGGTGAC+TGG + Chr3:78482876-78482895 MsG0380016055.01.T01:intron 50.0%
! ATCAAAATGTACCGGCGCTC+TGG + Chr3:78482505-78482524 MsG0380016055.01.T01:intron 50.0%
! ATCCCGGTGATTAGCTCACA+TGG + Chr3:78485480-78485499 MsG0380016055.01.T01:intron 50.0%
! ATGATTTCGAGGCACCCATC+AGG - Chr3:78484394-78484413 None:intergenic 50.0%
! CACGTCAGTCTCTGGAAAAG+TGG + Chr3:78484677-78484696 MsG0380016055.01.T01:CDS 50.0%
! CGCGTGTCCAATTTTGCATC+TGG + Chr3:78480287-78480306 MsG0380016055.01.T01:CDS 50.0%
! CTCTCCTGCAAGAGCTTTGT+GGG + Chr3:78482738-78482757 MsG0380016055.01.T01:intron 50.0%
! GAAGGTAAGCTTGGTTCGAC+GGG - Chr3:78480898-78480917 None:intergenic 50.0%
! GAGCTTTGTGGGTTGAAGTG+TGG + Chr3:78482749-78482768 MsG0380016055.01.T01:intron 50.0%
! GGAAGGTAAGCTTGGTTCGA+CGG - Chr3:78480899-78480918 None:intergenic 50.0%
! TCAAAATGTACCGGCGCTCT+GGG + Chr3:78482506-78482525 MsG0380016055.01.T01:intron 50.0%
! TGTGGGGGTTGCCACAATTT+TGG - Chr3:78482936-78482955 None:intergenic 50.0%
! TGTTGCTTCACGTCAGTCTC+TGG + Chr3:78484669-78484688 MsG0380016055.01.T01:CDS 50.0%
! TTAAGCTGTTGGCGGATCCA+TGG + Chr3:78485729-78485748 MsG0380016055.01.T01:CDS 50.0%
! TTGATGAGAAAGGTGTGCGC+TGG + Chr3:78484338-78484357 MsG0380016055.01.T01:CDS 50.0%
!! GTTTTAGTCTCACACCGCCT+AGG + Chr3:78483029-78483048 MsG0380016055.01.T01:intron 50.0%
!!! GGTGTGCGCTGGTTTTATAC+TGG + Chr3:78484349-78484368 MsG0380016055.01.T01:CDS 50.0%
AAGGAAGCTGGCTAGGAGCT+TGG + Chr3:78482067-78482086 MsG0380016055.01.T01:CDS 55.0%
ACAACCTCTCCTCGAGGCAT+TGG - Chr3:78484132-78484151 None:intergenic 55.0%
AGCTTGGGGAGTGGAGAAGT+TGG + Chr3:78482083-78482102 MsG0380016055.01.T01:CDS 55.0%
AGGAAGCTGGCTAGGAGCTT+GGG + Chr3:78482068-78482087 MsG0380016055.01.T01:CDS 55.0%
AGGCGGATGACTACAGTGTG+GGG + Chr3:78483787-78483806 MsG0380016055.01.T01:CDS 55.0%
CAAACCAATGCCTCGAGGAG+AGG + Chr3:78484125-78484144 MsG0380016055.01.T01:CDS 55.0%
CCAACTACAACCTCTCCTCG+AGG - Chr3:78484138-78484157 None:intergenic 55.0%
CCACAAAGCTCTTGCAGGAG+AGG - Chr3:78482740-78482759 None:intergenic 55.0%
CCTCGAGGAGAGGTTGTAGT+TGG + Chr3:78484135-78484154 MsG0380016055.01.T01:CDS 55.0%
CCTCTCCTGCAAGAGCTTTG+TGG + Chr3:78482737-78482756 MsG0380016055.01.T01:intron 55.0%
CGAGGAGAGGTTGTAGTTGG+CGG + Chr3:78484138-78484157 MsG0380016055.01.T01:CDS 55.0%
CTGCAGCCAGCATAACAGAC+TGG - Chr3:78481568-78481587 None:intergenic 55.0%
GAGGCGGATGACTACAGTGT+GGG + Chr3:78483786-78483805 MsG0380016055.01.T01:CDS 55.0%
GGCAGCCCCAGCAAATGTTT+CGG - Chr3:78483760-78483779 None:intergenic 55.0%
GGCTGTCCAGTCTGTTATGC+TGG + Chr3:78481559-78481578 MsG0380016055.01.T01:intron 55.0%
GGGTAGCAAGGACGTGTACT+TGG + Chr3:78481431-78481450 MsG0380016055.01.T01:CDS 55.0%
GGTACCGCTGTCAAAAGGGT+GGG - Chr3:78481683-78481702 None:intergenic 55.0%
GGTGTTCCGGTGGAAGTTAG+TGG + Chr3:78480026-78480045 MsG0380016055.01.T01:CDS 55.0%
GTAGTCATCCGCCTCAGAGA+AGG - Chr3:78483781-78483800 None:intergenic 55.0%
GTCGGCGCTTGTATGCAATC+TGG - Chr3:78482035-78482054 None:intergenic 55.0%
TCGGACAAACCAATGCCTCG+AGG + Chr3:78484120-78484139 MsG0380016055.01.T01:CDS 55.0%
TGAGGCGGATGACTACAGTG+TGG + Chr3:78483785-78483804 MsG0380016055.01.T01:CDS 55.0%
TGAGTGGTTCATTGCCCTCC+AGG + Chr3:78480370-78480389 MsG0380016055.01.T01:CDS 55.0%
TGGCAGTACAGGTCTGCCAA+AGG + Chr3:78480951-78480970 MsG0380016055.01.T01:CDS 55.0%
TGGTACCGCTGTCAAAAGGG+TGG - Chr3:78481684-78481703 None:intergenic 55.0%
! CAGTCTGTTATGCTGGCTGC+AGG + Chr3:78481566-78481585 MsG0380016055.01.T01:intron 55.0%
! CTGGCTGCAGGTGTTGCAAT+TGG + Chr3:78481578-78481597 MsG0380016055.01.T01:CDS 55.0%
! TGTGGCGGAGCTCCTTTATC+CGG + Chr3:78482171-78482190 MsG0380016055.01.T01:CDS 55.0%
! TTTCGAGGCACCCATCAGGA+TGG - Chr3:78484390-78484409 None:intergenic 55.0%
!! GATTGCATACAAGCGCCGAC+TGG + Chr3:78482035-78482054 MsG0380016055.01.T01:CDS 55.0%
!! GGGAGTGGAGAAGTTGGTGT+GGG + Chr3:78482089-78482108 MsG0380016055.01.T01:CDS 55.0%
!! TAGTGTGTTGGGTTGAGGGG+TGG + Chr3:78483007-78483026 MsG0380016055.01.T01:intron 55.0%
GACAGGGCTCCTATTGGGCA+AGG + Chr3:78483723-78483742 MsG0380016055.01.T01:intron 60.0%
GACTACAGTGTGGGGCGTGT+TGG + Chr3:78483795-78483814 MsG0380016055.01.T01:CDS 60.0%
GGAAGCTGGCTAGGAGCTTG+GGG + Chr3:78482069-78482088 MsG0380016055.01.T01:CDS 60.0%
GGCGGTTTCAGTGTGACAGC+TGG + Chr3:78484156-78484175 MsG0380016055.01.T01:CDS 60.0%
! CGCCGACTGGCTGCTGTAAA+AGG + Chr3:78482048-78482067 MsG0380016055.01.T01:CDS 60.0%
!! GGGGAGTGGAGAAGTTGGTG+TGG + Chr3:78482088-78482107 MsG0380016055.01.T01:CDS 60.0%
CTGGCTAGGAGCTTGGGGAG+TGG + Chr3:78482074-78482093 MsG0380016055.01.T01:CDS 65.0%
GCTCAAAGGACCCAGAGCGC+CGG - Chr3:78482519-78482538 None:intergenic 65.0%
TGCTGGGGCTGCCTTCTCTG+AGG + Chr3:78483767-78483786 MsG0380016055.01.T01:CDS 65.0%
! TGGGGCTGCCTTCTCTGAGG+CGG + Chr3:78483770-78483789 MsG0380016055.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 78479339 78486138 78479339 ID=MsG0380016055.01;Name=MsG0380016055.01
Chr3 mRNA 78479339 78486138 78479339 ID=MsG0380016055.01.T01;Parent=MsG0380016055.01;Name=MsG0380016055.01.T01;_AED=0.44;_eAED=0.44;_QI=184|1|1|1|0.90|0.83|12|291|727
Chr3 exon 78479339 78479464 78479339 ID=MsG0380016055.01.T01:exon:17381;Parent=MsG0380016055.01.T01
Chr3 exon 78479797 78480391 78479797 ID=MsG0380016055.01.T01:exon:17382;Parent=MsG0380016055.01.T01
Chr3 five_prime_UTR 78479339 78479464 78479339 ID=MsG0380016055.01.T01:five_prime_utr;Parent=MsG0380016055.01.T01
Chr3 five_prime_UTR 78479797 78479854 78479797 ID=MsG0380016055.01.T01:five_prime_utr;Parent=MsG0380016055.01.T01
Chr3 CDS 78479855 78480391 78479855 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 CDS 78480502 78480582 78480502 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 CDS 78480700 78480972 78480700 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 CDS 78481363 78481494 78481363 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 CDS 78481569 78481742 78481569 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 CDS 78481997 78482226 78481997 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 CDS 78483728 78483845 78483728 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 CDS 78484087 78484218 78484087 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 CDS 78484337 78484471 78484337 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 CDS 78484583 78484789 78484583 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 CDS 78485683 78485847 78485683 ID=MsG0380016055.01.T01:cds;Parent=MsG0380016055.01.T01
Chr3 three_prime_UTR 78485848 78486138 78485848 ID=MsG0380016055.01.T01:three_prime_utr;Parent=MsG0380016055.01.T01
Chr3 mRNA 78479574 78486138 78479574 ID=MsG0380016055.01.T02;Parent=MsG0380016055.01;Name=MsG0380016055.01.T02;_AED=0.44;_eAED=0.44;_QI=281|1|1|1|1|1|11|291|727
Chr3 exon 78479574 78480391 78479574 ID=MsG0380016055.01.T02:exon:17393;Parent=MsG0380016055.01.T02
Chr3 five_prime_UTR 78479574 78479854 78479574 ID=MsG0380016055.01.T02:five_prime_utr;Parent=MsG0380016055.01.T02
Chr3 CDS 78479855 78480391 78479855 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 CDS 78480502 78480582 78480502 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 CDS 78480700 78480972 78480700 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 CDS 78481363 78481494 78481363 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 CDS 78481569 78481742 78481569 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 CDS 78481997 78482226 78481997 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 CDS 78483728 78483845 78483728 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 CDS 78484087 78484218 78484087 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 CDS 78484337 78484471 78484337 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 CDS 78484583 78484789 78484583 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 CDS 78485683 78485847 78485683 ID=MsG0380016055.01.T02:cds;Parent=MsG0380016055.01.T02
Chr3 three_prime_UTR 78485848 78486138 78485848 ID=MsG0380016055.01.T02:three_prime_utr;Parent=MsG0380016055.01.T02
Gene Sequence

>MsG0380016055.01.T01

ATGGTTGATCCAAACGGTAGTTCCTCATGGTTGAAAAGTTTGAATATCTGTGAAACATTTGGGTTGAAAGATCATGGAGAACTTGGAATAGTGTTTGCTATAGTCATAGGCATCATTGTTCCTGTCTTGTTTTCGGTTTTTTTCTTAGGAAAGAAGAAAGGTAAAGTACGTGGTGTTCCGGTGGAAGTTAGTGGTGAATCGGGTTATGCTGTTCGTAATGCTCGATATTCTGAGTTGGTTGAAGTTCCTTGGAAAGGAGCTCCAACCATGGCTCATTTATTTGAGCAATCATGTAAAAAGCATACACATAATAGATTTCTTGGAACAAGGAAACTAATAGGGAAGGAATTTGTTACATCAAGTGATGGCAGGAAATTTGAGAAAGTTCACTTAGGAGAATATGAATGGGAAACCTATGGAGAAGTCTTTGCTCGCGTGTCCAATTTTGCATCTGGTCTTCTTAAGTTAGGCCATGATATAGATAGTCATGTTGCAATTTTTTCTGATACTCGGGCTGAGTGGTTCATTGCCCTCCAGGGTTGTTTCCGACAGAATATAACGGTCGTCACTATTTATGCTTCTCTAGGCGAGGATGCTCTGATTCACTCCCTGAACGAGACCCAAGTATCTACTCTGATCTGTGACGTAAAGCTGCTGAATAAGTTGGATGCAATAAGATCAAAACTAACATCTTTGCAAAATATAATTTACTTTGAAGACGATAGCAAAGAGGAACAAGCTTTTTCAGAAGGTTTGAGCAGCAACTGTACAATTGCATCTTTTGATGAAGTTGAGAAACTTGGGAAAGAAAGTCCCGTCGAACCAAGCTTACCTTCCAAGAATGCTGTTGCAGTTGTCATGTATACAAGTGGCAGTACAGGTCTGCCAAAGGGTGTCATGATTACTCACGGGAACATTGTAGCCACCACAGCAGCTGTTATGACTGTGATTCCAAATCTGGGTAGCAAGGACGTGTACTTGGCGTACTTGCCCCTTGCTCATGTTTTTGAAATGGCAGCAGAGTCTGTTATGCTGGCTGCAGGTGTTGCAATTGGTTACGGCAGTCCTATGACTTTGACCGATACATCTAATAAAGTCAAGAAAGGAACCAAGGGAGATGTTACTGTTTTAAAACCCACCCTTTTGACAGCGGTACCAGCTATTATTGATCGTATTCGAGATGGAGTTATAAAAAAGGTGGAGGAAAAAGGGGGACTTGCCAAGAATCTTTTCCAGATTGCATACAAGCGCCGACTGGCTGCTGTAAAAGGAAGCTGGCTAGGAGCTTGGGGAGTGGAGAAGTTGGTGTGGGATACCATTATCTTTAAAAAAATCCGTACTGTACTTGGAGGCAACCTCCGATTTATGCTTTGTGGCGGAGCTCCTTTATCCGGAGATTCACAACAATTCATCAATATCTGTGTGGGGGCTCCTATTGGGCAAGGATATGGTTTGACCGAAACATTTGCTGGGGCTGCCTTCTCTGAGGCGGATGACTACAGTGTGGGGCGTGTTGGCCCACCTCTGCCTTGTTGCTACATTAAGCTTGTTTCATGGGAAGAAGGAGGGTATCTATCATCGGACAAACCAATGCCTCGAGGAGAGGTTGTAGTTGGCGGTTTCAGTGTGACAGCTGGTTATTTTAAGAATCAAGATAAAACTGATGAAGTGTTCAAGGTTGATGAGAAAGGTGTGCGCTGGTTTTATACTGGTGACATTGGGCGATTCCATCCTGATGGGTGCCTCGAAATCATCGATAGGAAGAAGGATATTGTCAAACTTCAACATGGAGAATATATCTCTCTTGGAAAGGTTGAGGCAGCACTCGCGTCATGTGATTATGTGGATAGTATAATGGTGCATGCAGACCCCTTTCACAGTTACTGTGTTGCTCTAGCTGTTGCTTCACGTCAGTCTCTGGAAAAGTGGGCCCAAGAAACTGGTATCGAATACAAAGATTTTCCTGATCTCTGTAACAAACCTGAAGCTGTCACTGAGGTTCTGCAGTCCATTTCCAAGGCTGCAAAAGCTGCAAAGCTGCAAAAAACTGAAGTTCCTGCAAAGATTAAGCTGTTGGCGGATCCATGGACACCTGAATCTGGATTAGTTACTGCTGCTCTCAAGTTAAAGAGAGAACAGCTGAAAGCCAAATTCAATGATGATCTTCAGAAGTTGTATGCATGA

>MsG0380016055.01.T02

ATGGTTGATCCAAACGGTAGTTCCTCATGGTTGAAAAGTTTGAATATCTGTGAAACATTTGGGTTGAAAGATCATGGAGAACTTGGAATAGTGTTTGCTATAGTCATAGGCATCATTGTTCCTGTCTTGTTTTCGGTTTTTTTCTTAGGAAAGAAGAAAGGTAAAGTACGTGGTGTTCCGGTGGAAGTTAGTGGTGAATCGGGTTATGCTGTTCGTAATGCTCGATATTCTGAGTTGGTTGAAGTTCCTTGGAAAGGAGCTCCAACCATGGCTCATTTATTTGAGCAATCATGTAAAAAGCATACACATAATAGATTTCTTGGAACAAGGAAACTAATAGGGAAGGAATTTGTTACATCAAGTGATGGCAGGAAATTTGAGAAAGTTCACTTAGGAGAATATGAATGGGAAACCTATGGAGAAGTCTTTGCTCGCGTGTCCAATTTTGCATCTGGTCTTCTTAAGTTAGGCCATGATATAGATAGTCATGTTGCAATTTTTTCTGATACTCGGGCTGAGTGGTTCATTGCCCTCCAGGGTTGTTTCCGACAGAATATAACGGTCGTCACTATTTATGCTTCTCTAGGCGAGGATGCTCTGATTCACTCCCTGAACGAGACCCAAGTATCTACTCTGATCTGTGACGTAAAGCTGCTGAATAAGTTGGATGCAATAAGATCAAAACTAACATCTTTGCAAAATATAATTTACTTTGAAGACGATAGCAAAGAGGAACAAGCTTTTTCAGAAGGTTTGAGCAGCAACTGTACAATTGCATCTTTTGATGAAGTTGAGAAACTTGGGAAAGAAAGTCCCGTCGAACCAAGCTTACCTTCCAAGAATGCTGTTGCAGTTGTCATGTATACAAGTGGCAGTACAGGTCTGCCAAAGGGTGTCATGATTACTCACGGGAACATTGTAGCCACCACAGCAGCTGTTATGACTGTGATTCCAAATCTGGGTAGCAAGGACGTGTACTTGGCGTACTTGCCCCTTGCTCATGTTTTTGAAATGGCAGCAGAGTCTGTTATGCTGGCTGCAGGTGTTGCAATTGGTTACGGCAGTCCTATGACTTTGACCGATACATCTAATAAAGTCAAGAAAGGAACCAAGGGAGATGTTACTGTTTTAAAACCCACCCTTTTGACAGCGGTACCAGCTATTATTGATCGTATTCGAGATGGAGTTATAAAAAAGGTGGAGGAAAAAGGGGGACTTGCCAAGAATCTTTTCCAGATTGCATACAAGCGCCGACTGGCTGCTGTAAAAGGAAGCTGGCTAGGAGCTTGGGGAGTGGAGAAGTTGGTGTGGGATACCATTATCTTTAAAAAAATCCGTACTGTACTTGGAGGCAACCTCCGATTTATGCTTTGTGGCGGAGCTCCTTTATCCGGAGATTCACAACAATTCATCAATATCTGTGTGGGGGCTCCTATTGGGCAAGGATATGGTTTGACCGAAACATTTGCTGGGGCTGCCTTCTCTGAGGCGGATGACTACAGTGTGGGGCGTGTTGGCCCACCTCTGCCTTGTTGCTACATTAAGCTTGTTTCATGGGAAGAAGGAGGGTATCTATCATCGGACAAACCAATGCCTCGAGGAGAGGTTGTAGTTGGCGGTTTCAGTGTGACAGCTGGTTATTTTAAGAATCAAGATAAAACTGATGAAGTGTTCAAGGTTGATGAGAAAGGTGTGCGCTGGTTTTATACTGGTGACATTGGGCGATTCCATCCTGATGGGTGCCTCGAAATCATCGATAGGAAGAAGGATATTGTCAAACTTCAACATGGAGAATATATCTCTCTTGGAAAGGTTGAGGCAGCACTCGCGTCATGTGATTATGTGGATAGTATAATGGTGCATGCAGACCCCTTTCACAGTTACTGTGTTGCTCTAGCTGTTGCTTCACGTCAGTCTCTGGAAAAGTGGGCCCAAGAAACTGGTATCGAATACAAAGATTTTCCTGATCTCTGTAACAAACCTGAAGCTGTCACTGAGGTTCTGCAGTCCATTTCCAAGGCTGCAAAAGCTGCAAAGCTGCAAAAAACTGAAGTTCCTGCAAAGATTAAGCTGTTGGCGGATCCATGGACACCTGAATCTGGATTAGTTACTGCTGCTCTCAAGTTAAAGAGAGAACAGCTGAAAGCCAAATTCAATGATGATCTTCAGAAGTTGTATGCATGA

Protein sequence

>MsG0380016055.01.T01

MVDPNGSSSWLKSLNICETFGLKDHGELGIVFAIVIGIIVPVLFSVFFLGKKKGKVRGVPVEVSGESGYAVRNARYSELVEVPWKGAPTMAHLFEQSCKKHTHNRFLGTRKLIGKEFVTSSDGRKFEKVHLGEYEWETYGEVFARVSNFASGLLKLGHDIDSHVAIFSDTRAEWFIALQGCFRQNITVVTIYASLGEDALIHSLNETQVSTLICDVKLLNKLDAIRSKLTSLQNIIYFEDDSKEEQAFSEGLSSNCTIASFDEVEKLGKESPVEPSLPSKNAVAVVMYTSGSTGLPKGVMITHGNIVATTAAVMTVIPNLGSKDVYLAYLPLAHVFEMAAESVMLAAGVAIGYGSPMTLTDTSNKVKKGTKGDVTVLKPTLLTAVPAIIDRIRDGVIKKVEEKGGLAKNLFQIAYKRRLAAVKGSWLGAWGVEKLVWDTIIFKKIRTVLGGNLRFMLCGGAPLSGDSQQFINICVGAPIGQGYGLTETFAGAAFSEADDYSVGRVGPPLPCCYIKLVSWEEGGYLSSDKPMPRGEVVVGGFSVTAGYFKNQDKTDEVFKVDEKGVRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALASCDYVDSIMVHADPFHSYCVALAVASRQSLEKWAQETGIEYKDFPDLCNKPEAVTEVLQSISKAAKAAKLQKTEVPAKIKLLADPWTPESGLVTAALKLKREQLKAKFNDDLQKLYA*

>MsG0380016055.01.T02

MVDPNGSSSWLKSLNICETFGLKDHGELGIVFAIVIGIIVPVLFSVFFLGKKKGKVRGVPVEVSGESGYAVRNARYSELVEVPWKGAPTMAHLFEQSCKKHTHNRFLGTRKLIGKEFVTSSDGRKFEKVHLGEYEWETYGEVFARVSNFASGLLKLGHDIDSHVAIFSDTRAEWFIALQGCFRQNITVVTIYASLGEDALIHSLNETQVSTLICDVKLLNKLDAIRSKLTSLQNIIYFEDDSKEEQAFSEGLSSNCTIASFDEVEKLGKESPVEPSLPSKNAVAVVMYTSGSTGLPKGVMITHGNIVATTAAVMTVIPNLGSKDVYLAYLPLAHVFEMAAESVMLAAGVAIGYGSPMTLTDTSNKVKKGTKGDVTVLKPTLLTAVPAIIDRIRDGVIKKVEEKGGLAKNLFQIAYKRRLAAVKGSWLGAWGVEKLVWDTIIFKKIRTVLGGNLRFMLCGGAPLSGDSQQFINICVGAPIGQGYGLTETFAGAAFSEADDYSVGRVGPPLPCCYIKLVSWEEGGYLSSDKPMPRGEVVVGGFSVTAGYFKNQDKTDEVFKVDEKGVRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALASCDYVDSIMVHADPFHSYCVALAVASRQSLEKWAQETGIEYKDFPDLCNKPEAVTEVLQSISKAAKAAKLQKTEVPAKIKLLADPWTPESGLVTAALKLKREQLKAKFNDDLQKLYA*