AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006196.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006196.01.T01 MTR_1g115920 96.870 575 18 0 1 575 260 834 0.0 1160
MsG0180006196.01.T01 MTR_4g094355 92.784 194 11 1 382 575 250 440 8.12e-123 369
MsG0180006196.01.T01 MTR_4g094355 93.785 177 9 1 125 299 75 251 2.49e-102 317
MsG0180006196.01.T01 MTR_5g039050 88.288 222 18 2 263 484 67 280 1.70e-119 360
MsG0180006196.01.T01 MTR_5g039050 84.444 45 6 1 125 168 6 50 1.32e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006196.01.T01 AT1G28060 63.287 572 185 4 1 572 240 786 0.0 703
MsG0180006196.01.T01 AT1G28060 63.287 572 185 4 1 572 240 786 0.0 703
MsG0180006196.01.T01 AT1G28060 63.287 572 185 4 1 572 240 786 0.0 703
MsG0180006196.01.T01 AT3G55930 62.637 273 95 3 299 569 3 270 3.03e-104 315
MsG0180006196.01.T01 AT3G56790 45.536 112 55 2 283 388 92 203 8.95e-12 65.1
MsG0180006196.01.T01 AT3G55935 69.048 42 13 0 125 166 88 129 3.69e-11 61.6

Find 251 sgRNAs with CRISPR-Local

Find 554 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCCTTTCTATCGTTAAT+TGG 0.121879 1:+101223563 None:intergenic
CCACACCAGAACACATTTAT+TGG 0.132544 1:+101217952 None:intergenic
TTAGTAGCTAATTCTTTATT+TGG 0.180225 1:+101223623 None:intergenic
TGCCTCATGCAGAGTAAATT+TGG 0.191514 1:-101221267 MsG0180006196.01.T01:intron
TCTCCTTAGCTATACGCTTT+TGG 0.192141 1:+101218473 None:intergenic
TACTACCACAAATGAAAATA+AGG 0.214775 1:-101222430 MsG0180006196.01.T01:five_prime_UTR
TCGTTAATTGGGTGGGATTT+TGG 0.231191 1:+101223575 None:intergenic
CAATGAATCATTGTTGTCTT+TGG 0.231745 1:+101223080 None:intergenic
TGCTGGGGTTCCTCATTATT+GGG 0.233213 1:-101217843 MsG0180006196.01.T01:CDS
AATTGGATGATAAGAGAATT+AGG 0.237950 1:-101223212 MsG0180006196.01.T01:five_prime_UTR
TTGTCTCTCTCGTCCATGTT+AGG 0.240101 1:+101223515 None:intergenic
ATGCTGGGGTTCCTCATTAT+TGG 0.242299 1:-101217844 MsG0180006196.01.T01:CDS
CCCTGTCTCTGCTTCCTTCT+CGG 0.249774 1:+101223372 None:intergenic
CTTCTGCATTCTGGAAATTA+TGG 0.253483 1:-101218655 MsG0180006196.01.T01:CDS
ACACACTTGTCTCACTTTAC+AGG 0.257138 1:-101218201 MsG0180006196.01.T01:CDS
ACAAGTGTGTCCAATGTATT+TGG 0.267435 1:+101218214 None:intergenic
ACAAATGGACACTTCCTAAA+TGG 0.270058 1:+101217630 None:intergenic
AGAAGGAACGTAGGAGATTT+GGG 0.277133 1:-101223176 MsG0180006196.01.T01:five_prime_UTR
CTCATCTTGACCTTTGGTTT+TGG 0.279974 1:+101218409 None:intergenic
AAGAAGGAACGTAGGAGATT+TGG 0.280438 1:-101223177 MsG0180006196.01.T01:five_prime_UTR
CTCTCGTCCATGTTAGGGTT+TGG 0.285614 1:+101223521 None:intergenic
CTTTGCTAGCTGTGCTTGTT+TGG 0.291419 1:+101221218 None:intergenic
ACCTCTCAAGCTAACTAAAA+AGG 0.293051 1:-101218515 MsG0180006196.01.T01:CDS
CTCGGTCTTCTCTGTGATTC+CGG 0.301582 1:+101223390 None:intergenic
GAACTTTCTCGCTTCCATTT+AGG 0.305958 1:-101217644 MsG0180006196.01.T01:three_prime_UTR
ATTAAGTTCGGATTGATATC+AGG 0.315138 1:+101221183 None:intergenic
ACTTACCACCACTCAATATC+TGG 0.318366 1:+101221111 None:intergenic
CACCACTCAATATCTGGAAT+TGG 0.324849 1:+101221117 None:intergenic
GACGTGGCACTTCTGCATTC+TGG 0.325916 1:-101218664 MsG0180006196.01.T01:CDS
AAGTAACCTTAGCACATTAA+AGG 0.326015 1:-101221669 MsG0180006196.01.T01:intron
ATCAACTCTAAAGCGGGCCT+TGG 0.332933 1:+101218159 None:intergenic
AGATGAAGGCAATCTTAAAA+TGG 0.335054 1:-101218611 MsG0180006196.01.T01:CDS
AACAGCTCTCATGAGGATTC+TGG 0.336110 1:-101222396 MsG0180006196.01.T01:five_prime_UTR
CTCCCTTTCTATCGTTAATT+GGG 0.338236 1:+101223564 None:intergenic
GTTCATCTATTTCACGTCCC+TGG 0.343803 1:+101221720 None:intergenic
CCTGCCACCTCAGCTTCTTC+AGG 0.351954 1:-101221995 MsG0180006196.01.T01:CDS
GGTTGAGGTGGTGGAGGGGC+AGG 0.353286 1:+101218535 None:intergenic
GCCAGTGGCACTGGTGCTCC+TGG 0.353805 1:-101221923 MsG0180006196.01.T01:CDS
TGAAATACTAAAACCTGTAT+TGG 0.355353 1:-101221526 MsG0180006196.01.T01:CDS
CTCTTATGCGAGGAGTATCT+TGG 0.356963 1:+101223264 None:intergenic
TCTCGTCCATGTTAGGGTTT+GGG 0.357270 1:+101223522 None:intergenic
ATTGGATGATAAGAGAATTA+GGG 0.360540 1:-101223211 MsG0180006196.01.T01:five_prime_UTR
GAACCTATTGAAGCTCGATT+TGG 0.361063 1:+101217916 None:intergenic
TGTACTTTCTTCTGAATTTG+AGG 0.379576 1:+101222078 None:intergenic
AGCTTCAAAGTTGGTTGCAT+TGG 0.380123 1:+101221895 None:intergenic
AAATTACTCATCTTGACCTT+TGG 0.381357 1:+101218403 None:intergenic
GGTGGAGGGGCAGGCTCAGC+AGG 0.382361 1:+101218544 None:intergenic
ACTGGATAGGCATCCTAATA+AGG 0.384602 1:+101217757 None:intergenic
CCAGGAAACATATTTATTAG+AGG 0.384776 1:+101221812 None:intergenic
AGCTTGAGAGGTTGAGGTGG+TGG 0.385964 1:+101218526 None:intergenic
TGTTTGTGGAGGAAGGAAAA+TGG 0.392737 1:-101221416 MsG0180006196.01.T01:CDS
TCTGTAATTTCTATTAAGTT+CGG 0.393587 1:+101221171 None:intergenic
TGATAATGAGGCCAGGGTTA+AGG 0.395447 1:-101223124 MsG0180006196.01.T01:five_prime_UTR
TTTAATGTGCTAAGGTTACT+TGG 0.396566 1:+101221671 None:intergenic
TCTACAACTGCTGGAAAACT+TGG 0.400509 1:-101222351 MsG0180006196.01.T01:five_prime_UTR
TCCTCCTTCCTTTCCTATCA+AGG 0.400709 1:-101222463 MsG0180006196.01.T01:five_prime_UTR
TTGAGAGGTTGAGGTGGTGG+AGG 0.402450 1:+101218529 None:intergenic
GCCGGCCAATAAATGTGTTC+TGG 0.403741 1:-101217957 MsG0180006196.01.T01:CDS
AGCAAGTCAATTAAGAGGTA+TGG 0.404160 1:-101218058 MsG0180006196.01.T01:CDS
TTCTTCTCACGCAGCTCAGC+AGG 0.405655 1:+101218259 None:intergenic
TTGCCAAATCGAGCTTCAAT+AGG 0.406342 1:-101217919 MsG0180006196.01.T01:CDS
TCAAAATGAGGATTAGATTC+AGG 0.407433 1:+101221495 None:intergenic
GGCTCAGCAGGCGGTTCAAT+AGG 0.408739 1:+101218556 None:intergenic
ACATAGCGAGGATCGGGAAT+TGG 0.409452 1:-101223229 MsG0180006196.01.T01:five_prime_UTR
TGCAGCTGCTGAGCGTGAGC+AGG 0.412035 1:-101218317 MsG0180006196.01.T01:CDS
TCGATCTCTGTTTCGCCTAT+CGG 0.413474 1:+101223490 None:intergenic
ACCGAGAAGGAAGCAGAGAC+AGG 0.414870 1:-101223373 MsG0180006196.01.T01:five_prime_UTR
TTCATCTATTTCACGTCCCT+GGG 0.414957 1:+101221721 None:intergenic
AGTTAACAAAATAAGAAATC+TGG 0.421481 1:-101217737 MsG0180006196.01.T01:three_prime_UTR
TGCTGAATCAATAAAATTGA+AGG 0.422601 1:-101221385 MsG0180006196.01.T01:intron
CCTCTAATAAATATGTTTCC+TGG 0.427265 1:-101221812 MsG0180006196.01.T01:CDS
TCAGAAGAAAGTACACAGTT+TGG 0.427302 1:-101222070 MsG0180006196.01.T01:CDS
CAGGAGCTTGCTGCCAGGAT+GGG 0.427734 1:-101221860 MsG0180006196.01.T01:CDS
CAAGATACTCCTCGCATAAG+AGG 0.431589 1:-101223263 MsG0180006196.01.T01:five_prime_UTR
TGTCTCTCTCGTCCATGTTA+GGG 0.432726 1:+101223516 None:intergenic
CAAAGCTCCTGCGGCCTAAG+AGG 0.436122 1:-101221449 MsG0180006196.01.T01:CDS
TAACGTCTGGTGTAGCAATC+TGG 0.436715 1:+101221789 None:intergenic
GCTACGGTCGCGGTCACGTT+CGG 0.436891 1:+101223463 None:intergenic
TCAGGAGCTTGCTGCCAGGA+TGG 0.439505 1:-101221861 MsG0180006196.01.T01:CDS
TGTTCTTCGTCTTGACGCCC+AGG 0.441585 1:-101221738 MsG0180006196.01.T01:CDS
TTATGCTTAGGCGTATCAAT+TGG 0.445510 1:-101218030 MsG0180006196.01.T01:CDS
CATCAGAATCGTGGCGGCTC+CGG 0.447371 1:+101223435 None:intergenic
AACAGAAAATTCATCCTCTT+AGG 0.449563 1:+101221435 None:intergenic
TAGAGAACATAGCGAGGATC+GGG 0.453467 1:-101223235 MsG0180006196.01.T01:five_prime_UTR
AGTAATTTACATAAGGTACT+AGG 0.456676 1:-101218388 MsG0180006196.01.T01:CDS
AATCGTGGCGGCTCCGGTGA+TGG 0.459978 1:+101223441 None:intergenic
GCGACAGGAGCTGATTAGAC+AGG 0.461212 1:-101218446 MsG0180006196.01.T01:CDS
TGAAGCTGTCAGACGTGCTC+AGG 0.465608 1:-101221879 MsG0180006196.01.T01:CDS
TGCTGTGGTGCCTGCTAGTG+TGG 0.467097 1:-101222505 MsG0180006196.01.T01:five_prime_UTR
TCCGGTGATGGCTACGGTCG+CGG 0.467330 1:+101223453 None:intergenic
CCACCCAATTAACGATAGAA+AGG 0.467972 1:-101223567 MsG0180006196.01.T01:five_prime_UTR
TAGGGTTTCTGAAGCGAAGA+AGG 0.468422 1:-101223193 MsG0180006196.01.T01:five_prime_UTR
TTAGTTAGCTTGAGAGGTTG+AGG 0.468472 1:+101218520 None:intergenic
ATTAGCGTTGTTGTGGTTGA+AGG 0.468898 1:-101218085 MsG0180006196.01.T01:CDS
GCTCAAGAAAACCGTTTGAC+TGG 0.469577 1:-101218130 MsG0180006196.01.T01:CDS
GATGGATCATCTACAACTGC+TGG 0.469655 1:-101222360 MsG0180006196.01.T01:five_prime_UTR
CTTTCTATCGTTAATTGGGT+GGG 0.472705 1:+101223568 None:intergenic
TGCTGAGCTGCGTGAGAAGA+AGG 0.474449 1:-101218257 MsG0180006196.01.T01:CDS
AGATCCCACCCGGCTTGAAA+AGG 0.474598 1:-101218350 MsG0180006196.01.T01:CDS
ACCAGGAGCACCAGTGCCAC+TGG 0.474959 1:+101221922 None:intergenic
GGAGCACCAGTGCCACTGGC+TGG 0.478750 1:+101221926 None:intergenic
GATGTCACAGCCACACTAGC+AGG 0.479557 1:+101222495 None:intergenic
CCTTTCTATCGTTAATTGGG+TGG 0.481252 1:+101223567 None:intergenic
AAAAGGAGCATAAGAAACTA+AGG 0.481402 1:-101218498 MsG0180006196.01.T01:CDS
ACTACCACAAATGAAAATAA+GGG 0.482926 1:-101222429 MsG0180006196.01.T01:five_prime_UTR
ACCACTCAATATCTGGAATT+GGG 0.483308 1:+101221118 None:intergenic
CACACTTGTCTCACTTTACA+GGG 0.483911 1:-101218200 MsG0180006196.01.T01:CDS
ACAGTGCCCTCTCTTAGTGC+TGG 0.485201 1:-101222031 MsG0180006196.01.T01:CDS
GTGAGCAGGCTCACATAGAT+AGG 0.485650 1:-101218303 MsG0180006196.01.T01:CDS
GTAATCGAAGATACCTTGAT+AGG 0.492242 1:+101222450 None:intergenic
CAAGCGATACCGCACACAAA+TGG 0.492478 1:+101217615 None:intergenic
AAAATTGACATATTTGCAGC+AGG 0.493671 1:+101221971 None:intergenic
CAAGATGAGTAATTTACATA+AGG 0.497213 1:-101218395 MsG0180006196.01.T01:CDS
ACCAGAACACATTTATTGGC+CGG 0.498365 1:+101217956 None:intergenic
AATCCTCCAGCCAGTGGCAC+TGG 0.498599 1:-101221932 MsG0180006196.01.T01:CDS
TACTCACCTTTAATGTGCTA+AGG 0.500336 1:+101221663 None:intergenic
TGGGCGTCAAGACGAAGAAC+AGG 0.500740 1:+101221740 None:intergenic
TCAGGATCGACATCCAATAC+AGG 0.501479 1:+101221513 None:intergenic
AATATTGATATACCAGATGC+TGG 0.502387 1:+101217470 None:intergenic
GGAGCCTTGGTTGGTTTCTG+AGG 0.503520 1:+101221761 None:intergenic
AGCTAAGGAGAAAGAGCGAC+AGG 0.504282 1:-101218461 MsG0180006196.01.T01:CDS
ATCATGGCGGAATCCCATCC+TGG 0.504457 1:+101221847 None:intergenic
TCAACTCTAAAGCGGGCCTT+GGG 0.504713 1:+101218160 None:intergenic
GAGGAGCAAATTGTGGATCA+TGG 0.506301 1:+101221831 None:intergenic
GTTAAGGAGGAAGTTACTAA+TGG 0.507245 1:-101223108 MsG0180006196.01.T01:five_prime_UTR
TGCCTTAGCAAAGGCTAAGA+AGG 0.507867 1:-101222310 MsG0180006196.01.T01:five_prime_UTR
CCTGAAGAAGCTGAGGTGGC+AGG 0.508974 1:+101221995 None:intergenic
GCCTTCATCTATAGTACCGT+TGG 0.510107 1:+101218624 None:intergenic
TGAGAGGTTGAGGTGGTGGA+GGG 0.511983 1:+101218530 None:intergenic
GCAAGTCAATTAAGAGGTAT+GGG 0.512247 1:-101218057 MsG0180006196.01.T01:CDS
GTGCTCAGGAGCTTGCTGCC+AGG 0.513129 1:-101221865 MsG0180006196.01.T01:CDS
CAAGTGTGTCCAATGTATTT+GGG 0.514012 1:+101218215 None:intergenic
ATTATTATGATAATGAGGCC+AGG 0.515428 1:-101223131 MsG0180006196.01.T01:five_prime_UTR
CGAAGAACAGGAGCCTTGGT+TGG 0.517067 1:+101221752 None:intergenic
ATCATTGACCACAGGAAACA+AGG 0.517635 1:+101217709 None:intergenic
CCTCAGTATAGTTGACAGCT+TGG 0.520608 1:+101217819 None:intergenic
GCTGTTTCAGGGCGTTGCCG+TGG 0.520851 1:-101222535 MsG0180006196.01.T01:intron
TTTATTAGAGGAGCAAATTG+TGG 0.521484 1:+101221824 None:intergenic
CATTTGTGTGCGGTATCGCT+TGG 0.521652 1:-101217614 MsG0180006196.01.T01:three_prime_UTR
GTGGAAGCAAGTCAATTAAG+AGG 0.522404 1:-101218063 MsG0180006196.01.T01:CDS
GGAGGATTTACAACAGCAGC+AGG 0.525427 1:+101221947 None:intergenic
GGCGGCTCCGGTGATGGCTA+CGG 0.528950 1:+101223447 None:intergenic
TTGGTTGCATTGGCGACACC+AGG 0.530093 1:+101221905 None:intergenic
CTGTTTCAGGGCGTTGCCGT+GGG 0.530691 1:-101222534 MsG0180006196.01.T01:intron
GAGCCTTGGTTGGTTTCTGA+GGG 0.531813 1:+101221762 None:intergenic
TTCTGAGGGATAGTAACGTC+TGG 0.532884 1:+101221776 None:intergenic
AGCTCAAGCAAAAGAGCAGA+AGG 0.535132 1:-101221241 MsG0180006196.01.T01:CDS
CCGAGAAGGAAGCAGAGACA+GGG 0.539039 1:-101223372 MsG0180006196.01.T01:five_prime_UTR
TTTCGATGACCCAAATACAT+TGG 0.539572 1:-101218224 MsG0180006196.01.T01:CDS
TCTGGAAAATCTAGTACAGA+TGG 0.540285 1:-101222378 MsG0180006196.01.T01:five_prime_UTR
ATCGAAGCGCGATGAAGAGA+GGG 0.541984 1:-101223301 MsG0180006196.01.T01:five_prime_UTR
CGAAGATACCTTGATAGGAA+AGG 0.543016 1:+101222455 None:intergenic
GTTAGCTTGAGAGGTTGAGG+TGG 0.545509 1:+101218523 None:intergenic
GCCCTCTCTTAGTGCTGGAG+TGG 0.546210 1:-101222026 MsG0180006196.01.T01:CDS
AGCTGCGTGAGAAGAAGGAA+AGG 0.547194 1:-101218252 MsG0180006196.01.T01:CDS
ATAGAGAACATAGCGAGGAT+CGG 0.548369 1:-101223236 MsG0180006196.01.T01:five_prime_UTR
CCCATTCTCTCATCAAAATG+AGG 0.549338 1:+101221483 None:intergenic
GGTATGGGAAACTTATGCTT+AGG 0.550753 1:-101218042 MsG0180006196.01.T01:CDS
ATAGGAAAGGAAGGAGGAGG+TGG 0.551217 1:+101222468 None:intergenic
TGGTGCTCCCTTGTTTCCTG+TGG 0.553458 1:-101217717 MsG0180006196.01.T01:three_prime_UTR
AATCGAAGCGCGATGAAGAG+AGG 0.554231 1:-101223302 MsG0180006196.01.T01:five_prime_UTR
GAGAGGTTGAGGTGGTGGAG+GGG 0.555080 1:+101218531 None:intergenic
CAAACAAGCACAGCTAGCAA+AGG 0.555686 1:-101221217 MsG0180006196.01.T01:CDS
AAGACGAAGAACAGGAGCCT+TGG 0.557281 1:+101221748 None:intergenic
ACCGCGACCGTAGCCATCAC+CGG 0.559344 1:-101223454 MsG0180006196.01.T01:five_prime_UTR
CACCCAATTAACGATAGAAA+GGG 0.559453 1:-101223566 MsG0180006196.01.T01:five_prime_UTR
TCACCGCACATCCAGTCAAA+CGG 0.560006 1:+101218119 None:intergenic
AACATTGCAGTATATCATGA+TGG 0.560545 1:+101217577 None:intergenic
ATTAACATCAACTCTAAAGC+GGG 0.562029 1:+101218153 None:intergenic
GTTCTTCGTCTTGACGCCCA+GGG 0.562372 1:-101221737 MsG0180006196.01.T01:CDS
TGATGGTATTAGCGTTGTTG+TGG 0.562974 1:-101218092 MsG0180006196.01.T01:CDS
GACCCAAAAGCGTATAGCTA+AGG 0.563409 1:-101218476 MsG0180006196.01.T01:CDS
ACACTAGCAGGCACCACAGC+AGG 0.563417 1:+101222507 None:intergenic
AAGGAAGCAGAGACAGGGAG+AGG 0.563472 1:-101223367 MsG0180006196.01.T01:five_prime_UTR
AATTCATCCTCTTAGGCCGC+AGG 0.563858 1:+101221442 None:intergenic
GCTACTAAAATCTAAGCTGA+AGG 0.564123 1:-101223608 MsG0180006196.01.T01:five_prime_UTR
TCTGGTGTAGCAATCTGGCC+AGG 0.566957 1:+101221794 None:intergenic
GACGAAAGAGAGGGTAGCAA+AGG 0.567020 1:-101223333 MsG0180006196.01.T01:five_prime_UTR
ACCAACGGTACTATAGATGA+AGG 0.569914 1:-101218625 MsG0180006196.01.T01:CDS
AGACGATTATTATGATAATG+AGG 0.570457 1:-101223136 MsG0180006196.01.T01:five_prime_UTR
TGAAATGTGTTCAGCAACAC+AGG 0.572948 1:+101217445 None:intergenic
AGGACCTGAAGAAGCTGAGG+TGG 0.576116 1:+101221991 None:intergenic
GTATCTCCCAAACCCTAACA+TGG 0.578893 1:-101223528 MsG0180006196.01.T01:five_prime_UTR
TTATTATGATAATGAGGCCA+GGG 0.581357 1:-101223130 MsG0180006196.01.T01:five_prime_UTR
AGGAAGCAGAGACAGGGAGA+GGG 0.581583 1:-101223366 MsG0180006196.01.T01:five_prime_UTR
GTAATTTACATAAGGTACTA+GGG 0.581923 1:-101218387 MsG0180006196.01.T01:CDS
AGCCTTCTTAGCCTTTGCTA+AGG 0.581971 1:+101222308 None:intergenic
GGTCAGATCGATGATGGCGG+TGG 0.582301 1:+101223411 None:intergenic
AGCGTTGTTGTGGTTGAAGG+TGG 0.582371 1:-101218082 MsG0180006196.01.T01:CDS
ATACGATAGAGACGAAAGAG+AGG 0.582778 1:-101223343 MsG0180006196.01.T01:five_prime_UTR
ACGTCTGACAGCTTCAAAGT+TGG 0.584985 1:+101221886 None:intergenic
CTAAGGCATCACTACTAGAG+AGG 0.588190 1:+101222325 None:intergenic
GAAGCTGAAGAAAATTCCTC+AGG 0.588505 1:-101222259 MsG0180006196.01.T01:intron
GATTCCGGTCAGATCGATGA+TGG 0.589596 1:+101223405 None:intergenic
GATACCTTGATAGGAAAGGA+AGG 0.591174 1:+101222459 None:intergenic
AGATTCAGACGATGACAAGC+CGG 0.594289 1:-101217975 MsG0180006196.01.T01:CDS
GGAGGGGCAGGCTCAGCAGG+CGG 0.594324 1:+101218547 None:intergenic
TAGTATTAACAGCTCTCATG+AGG 0.594654 1:-101222403 MsG0180006196.01.T01:five_prime_UTR
AAAGAGAGGGTAGCAAAGGT+AGG 0.594676 1:-101223329 MsG0180006196.01.T01:five_prime_UTR
GCACCAGTGCCACTGGCTGG+AGG 0.597781 1:+101221929 None:intergenic
CACCACAGCAGGTGATCCCA+CGG 0.598270 1:+101222518 None:intergenic
TTGTAGACATCATTGACCAC+AGG 0.598366 1:+101217701 None:intergenic
GCTTAGGCGTATCAATTGGA+CGG 0.603320 1:-101218026 MsG0180006196.01.T01:CDS
TCTATCTTTCCTCTTATGCG+AGG 0.606208 1:+101223254 None:intergenic
GGCGGTGGTCATCAGAATCG+TGG 0.608862 1:+101223426 None:intergenic
ACCGCCATCATCGATCTGAC+CGG 0.610844 1:-101223409 MsG0180006196.01.T01:five_prime_UTR
TGCCGTGGGATCACCTGCTG+TGG 0.611626 1:-101222520 MsG0180006196.01.T01:five_prime_UTR
CGACAGGAGCTGATTAGACA+GGG 0.614849 1:-101218445 MsG0180006196.01.T01:CDS
TCATTGACCACAGGAAACAA+GGG 0.615042 1:+101217710 None:intergenic
TTGATAGGAAAGGAAGGAGG+AGG 0.615996 1:+101222465 None:intergenic
AAATGACCTCTCTCATCCCA+AGG 0.616566 1:-101218176 MsG0180006196.01.T01:CDS
AGTAACTTCCTCCTTAACCC+TGG 0.616657 1:+101223113 None:intergenic
GGATGTGCGGTGATTTGTGA+TGG 0.616908 1:-101218109 MsG0180006196.01.T01:CDS
TGTAATGAAAGCAAAACTGA+AGG 0.617069 1:-101221142 MsG0180006196.01.T01:CDS
ACAGCTTGGTCCCAATAATG+AGG 0.617442 1:+101217833 None:intergenic
CCAATTAACGATAGAAAGGG+AGG 0.617736 1:-101223563 MsG0180006196.01.T01:five_prime_UTR
TAGTAGTGATGCCTTAGCAA+AGG 0.620911 1:-101222319 MsG0180006196.01.T01:five_prime_UTR
CATAGAACCGCCAAAACCAA+AGG 0.624392 1:-101218419 MsG0180006196.01.T01:CDS
AGCACAGCTAGCAAAGGCAA+AGG 0.626359 1:-101221211 MsG0180006196.01.T01:CDS
GCAGGCGGTTCAATAGGCCG+AGG 0.628346 1:+101218562 None:intergenic
TAATGAGGCCAGGGTTAAGG+AGG 0.630593 1:-101223121 MsG0180006196.01.T01:five_prime_UTR
TGCCACTCCAGCACTAAGAG+AGG 0.632266 1:+101222024 None:intergenic
AGCAGGACCTGAAGAAGCTG+AGG 0.633784 1:+101221988 None:intergenic
GTTGTAAATCCTCCAGCCAG+TGG 0.634542 1:-101221938 MsG0180006196.01.T01:CDS
AGGAAGTGTCCATTTGTGTG+CGG 0.639666 1:-101217624 MsG0180006196.01.T01:three_prime_UTR
GCCACTCCAGCACTAAGAGA+GGG 0.644669 1:+101222025 None:intergenic
ACCCAATTCCAGATATTGAG+TGG 0.645164 1:-101221119 MsG0180006196.01.T01:CDS
TGAAGAGAGGGAAGATTCAG+CGG 0.646031 1:-101223289 MsG0180006196.01.T01:five_prime_UTR
AGCGGGCCTTGGGATGAGAG+AGG 0.647591 1:+101218170 None:intergenic
CCAATAAATGTGTTCTGGTG+TGG 0.648398 1:-101217952 MsG0180006196.01.T01:CDS
GAAAGATAGAGAACATAGCG+AGG 0.651265 1:-101223241 MsG0180006196.01.T01:five_prime_UTR
CTGAAGCGAAGAAGGAACGT+AGG 0.651432 1:-101223185 MsG0180006196.01.T01:five_prime_UTR
AATTATGGTGACATTACCAA+CGG 0.654556 1:-101218640 MsG0180006196.01.T01:CDS
GGACGTGAAATAGATGAACA+TGG 0.655823 1:-101221716 MsG0180006196.01.T01:CDS
AAATGTGTTCTGGTGTGGCA+AGG 0.657323 1:-101217947 MsG0180006196.01.T01:CDS
TACGATAGAGACGAAAGAGA+GGG 0.657871 1:-101223342 MsG0180006196.01.T01:five_prime_UTR
CAATTAACGATAGAAAGGGA+GGG 0.659557 1:-101223562 MsG0180006196.01.T01:five_prime_UTR
ACCTTGATAGGAAAGGAAGG+AGG 0.662265 1:+101222462 None:intergenic
CATTAACATCAACTCTAAAG+CGG 0.666533 1:+101218152 None:intergenic
ACGAGAGAGACAAATCCGAT+AGG 0.669354 1:-101223505 MsG0180006196.01.T01:five_prime_UTR
AATCACAGAGAAGACCGAGA+AGG 0.670001 1:-101223386 MsG0180006196.01.T01:five_prime_UTR
CAATTCCAGATATTGAGTGG+TGG 0.676443 1:-101221116 MsG0180006196.01.T01:intron
GAAGGAACGTAGGAGATTTG+GGG 0.681742 1:-101223175 MsG0180006196.01.T01:five_prime_UTR
TCGACAAAACAAAGCTCCTG+CGG 0.696622 1:-101221458 MsG0180006196.01.T01:CDS
TCCGGTCAGATCGATGATGG+CGG 0.696675 1:+101223408 None:intergenic
AAGCAACTCAAGATCCCACC+CGG 0.703568 1:-101218360 MsG0180006196.01.T01:CDS
AAACCGTTTGACTGGATGTG+CGG 0.703995 1:-101218122 MsG0180006196.01.T01:CDS
CCAAGCTGTCAACTATACTG+AGG 0.711460 1:-101217819 MsG0180006196.01.T01:CDS
GGTGGTCATCAGAATCGTGG+CGG 0.717210 1:+101223429 None:intergenic
TATCCCTCAGAAACCAACCA+AGG 0.732982 1:-101221765 MsG0180006196.01.T01:CDS
GAGCAAATTGTGGATCATGG+CGG 0.762331 1:+101221834 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTTAATAGATTTATAAA+AGG + Chr1:101222405-101222424 None:intergenic 10.0%
!! AAGTTAATAGATTTATAAAA+GGG + Chr1:101222404-101222423 None:intergenic 10.0%
!!! ACACTTTTTTAATAATAATT+GGG - Chr1:101221211-101221230 MsG0180006196.01.T01:CDS 10.0%
!!! TCATTTTCTTAAATTATTAT+TGG - Chr1:101218376-101218395 MsG0180006196.01.T01:CDS 10.0%
!!! TTTATAAATCTATTAACTTT+TGG - Chr1:101222405-101222424 MsG0180006196.01.T01:five_prime_UTR 10.0%
!! AATTTAATGGAAAATATTGT+GGG + Chr1:101221179-101221198 None:intergenic 15.0%
!! GTTAAATTAACTTAATCATA+TGG + Chr1:101220934-101220953 None:intergenic 15.0%
!! TAATTTAATGGAAAATATTG+TGG + Chr1:101221180-101221199 None:intergenic 15.0%
!! TTATAAAACATAAACAAACA+AGG + Chr1:101222094-101222113 None:intergenic 15.0%
!!! CACACTTTTTTAATAATAAT+TGG - Chr1:101221210-101221229 MsG0180006196.01.T01:CDS 15.0%
!!! GTTTGTTTATGTTTTATAAA+GGG - Chr1:101222095-101222114 MsG0180006196.01.T01:CDS 15.0%
!!! TAAATCATGTATAGTATTTT+AGG - Chr1:101221924-101221943 MsG0180006196.01.T01:CDS 15.0%
!!! TGTTTGTTTATGTTTTATAA+AGG - Chr1:101222094-101222113 MsG0180006196.01.T01:CDS 15.0%
!!! TTTTATTAATAGTACCTAAT+AGG + Chr1:101220142-101220161 None:intergenic 15.0%
!! AAATATACTTTACATACACT+GGG + Chr1:101221765-101221784 None:intergenic 20.0%
!! AAATTATAAATTAGTACACG+TGG - Chr1:101221347-101221366 MsG0180006196.01.T01:intron 20.0%
!! AAGAAAATGACAAAATTGAA+TGG + Chr1:101218366-101218385 None:intergenic 20.0%
!! AATAAACAATATGACATGAA+CGG - Chr1:101221983-101222002 MsG0180006196.01.T01:CDS 20.0%
!! AATTATAAATTAGTACACGT+GGG - Chr1:101221348-101221367 MsG0180006196.01.T01:intron 20.0%
!! AGTTAACAAAATAAGAAATC+TGG - Chr1:101223366-101223385 MsG0180006196.01.T01:five_prime_UTR 20.0%
!! ATGAAATAAAACCAAGATAA+AGG + Chr1:101218071-101218090 None:intergenic 20.0%
!! TAAATATACTTTACATACAC+TGG + Chr1:101221766-101221785 None:intergenic 20.0%
!! TAACACCAAGTAAATTAAAT+TGG + Chr1:101218470-101218489 None:intergenic 20.0%
!! TCTGTAATTTCTATTAAGTT+CGG + Chr1:101219935-101219954 None:intergenic 20.0%
!! TGCAAGAATGATTAATTTAA+TGG + Chr1:101221192-101221211 None:intergenic 20.0%
!! TTAGTAGCTAATTCTTTATT+TGG + Chr1:101217483-101217502 None:intergenic 20.0%
!!! AGATTTCTTATTTTGTTAAC+TGG + Chr1:101223367-101223386 None:intergenic 20.0%
!!! GAAAACTTGTTTTGATTAAA+GGG - Chr1:101221645-101221664 MsG0180006196.01.T01:intron 20.0%
!!! GTAAACTACTCTTTTTTTTT+TGG - Chr1:101223558-101223577 MsG0180006196.01.T01:five_prime_UTR 20.0%
!!! TCTATCCAATTTAATTTACT+TGG - Chr1:101218462-101218481 MsG0180006196.01.T01:CDS 20.0%
!!! TCTCATGTATTATTTGTTTT+GGG - Chr1:101218504-101218523 MsG0180006196.01.T01:CDS 20.0%
!!! TGAAAACTTGTTTTGATTAA+AGG - Chr1:101221644-101221663 MsG0180006196.01.T01:intron 20.0%
!!! TTCTCATGTATTATTTGTTT+TGG - Chr1:101218503-101218522 MsG0180006196.01.T01:CDS 20.0%
! AAAACATAAACAAACAAGGA+GGG + Chr1:101222090-101222109 None:intergenic 25.0%
! AACAATAAACAATTTACCTG+AGG + Chr1:101218863-101218882 None:intergenic 25.0%
! AACTGTTTACTGAATTTGAA+TGG - Chr1:101218221-101218240 MsG0180006196.01.T01:CDS 25.0%
! AAGAAATTTGTGTGCTTATT+AGG - Chr1:101221311-101221330 MsG0180006196.01.T01:intron 25.0%
! AAGCACACAAATTTCTTAAA+TGG + Chr1:101221308-101221327 None:intergenic 25.0%
! AATGAAGTGATTGTATTAAG+AGG + Chr1:101221577-101221596 None:intergenic 25.0%
! AATTGGATGATAAGAGAATT+AGG - Chr1:101217891-101217910 MsG0180006196.01.T01:CDS 25.0%
! ACTACCACAAATGAAAATAA+GGG - Chr1:101218674-101218693 MsG0180006196.01.T01:intron 25.0%
! ACTGTTTACTGAATTTGAAT+GGG - Chr1:101218222-101218241 MsG0180006196.01.T01:CDS 25.0%
! AGAATATCACTTCAAATTGT+AGG - Chr1:101218171-101218190 MsG0180006196.01.T01:CDS 25.0%
! AGCACACAAATTTCTTAAAT+GGG + Chr1:101221307-101221326 None:intergenic 25.0%
! ATTGGAAAGAAATAAGTCAA+AGG + Chr1:101219786-101219805 None:intergenic 25.0%
! ATTGGATGATAAGAGAATTA+GGG - Chr1:101217892-101217911 MsG0180006196.01.T01:CDS 25.0%
! CAAGATGAGTAATTTACATA+AGG - Chr1:101222708-101222727 MsG0180006196.01.T01:intron 25.0%
! CAGACTGTAATATAATCAAA+AGG + Chr1:101220674-101220693 None:intergenic 25.0%
! GGTTAAACTAACTTATCATA+TGG + Chr1:101220761-101220780 None:intergenic 25.0%
! GTAATTATAATGAGAGAAAG+AGG + Chr1:101219759-101219778 None:intergenic 25.0%
! TAAAACATAAACAAACAAGG+AGG + Chr1:101222091-101222110 None:intergenic 25.0%
! TACTACCACAAATGAAAATA+AGG - Chr1:101218673-101218692 MsG0180006196.01.T01:intron 25.0%
! TATGCATAGGTTTAGAAAAA+AGG - Chr1:101220524-101220543 MsG0180006196.01.T01:intron 25.0%
! TGAAATAAATCAGTATCCTA+AGG + Chr1:101218933-101218952 None:intergenic 25.0%
! TGAAATACTAAAACCTGTAT+TGG - Chr1:101219577-101219596 MsG0180006196.01.T01:intron 25.0%
! TGCTGAATCAATAAAATTGA+AGG - Chr1:101219718-101219737 MsG0180006196.01.T01:intron 25.0%
! TGTTCTTATGATTACTTTGT+TGG - Chr1:101218109-101218128 MsG0180006196.01.T01:CDS 25.0%
! TTACTATTTAGATAACAAGC+CGG + Chr1:101222031-101222050 None:intergenic 25.0%
! TTAGAAACCTATACTTTACA+AGG - Chr1:101221601-101221620 MsG0180006196.01.T01:intron 25.0%
! TTGTAATTTATCTGCATTCA+GGG - Chr1:101222330-101222349 MsG0180006196.01.T01:five_prime_UTR 25.0%
! TTTATGTGTCAATGCTTTAT+AGG - Chr1:101218399-101218418 MsG0180006196.01.T01:CDS 25.0%
! TTTGTAATTTATCTGCATTC+AGG - Chr1:101222329-101222348 MsG0180006196.01.T01:five_prime_UTR 25.0%
!! AGACGATTATTATGATAATG+AGG - Chr1:101217967-101217986 MsG0180006196.01.T01:CDS 25.0%
!! AGTAATTTACATAAGGTACT+AGG - Chr1:101222715-101222734 MsG0180006196.01.T01:intron 25.0%
!! AGTTATTGATAGTTGATTAG+TGG - Chr1:101221279-101221298 MsG0180006196.01.T01:intron 25.0%
!! ATTAACTTTTGGATTTTGTC+AGG - Chr1:101222416-101222435 MsG0180006196.01.T01:five_prime_UTR 25.0%
!! GAATTGTCTTCTAATGTTTT+TGG - Chr1:101223319-101223338 MsG0180006196.01.T01:five_prime_UTR 25.0%
!! GGAAAAATTCAACTTTTATG+TGG - Chr1:101222513-101222532 MsG0180006196.01.T01:five_prime_UTR 25.0%
!! GTAATTTACATAAGGTACTA+GGG - Chr1:101222716-101222735 MsG0180006196.01.T01:intron 25.0%
!! GTTATTGATAGTTGATTAGT+GGG - Chr1:101221280-101221299 MsG0180006196.01.T01:intron 25.0%
!! TGTAAAGTATATTTAGAGCA+AGG - Chr1:101221771-101221790 MsG0180006196.01.T01:CDS 25.0%
!! TTAACTTTTGGATTTTGTCA+GGG - Chr1:101222417-101222436 MsG0180006196.01.T01:five_prime_UTR 25.0%
!!! ACGATTTGGTGTTAATAAAA+TGG - Chr1:101220799-101220818 MsG0180006196.01.T01:intron 25.0%
!!! ATTTTAGAACCATAAGAGAA+TGG + Chr1:101220331-101220350 None:intergenic 25.0%
!!! CATTTTAGAAACTTATGCAT+AGG - Chr1:101220511-101220530 MsG0180006196.01.T01:intron 25.0%
!!! GATTTTGCTATATCATTTAG+TGG - Chr1:101223433-101223452 MsG0180006196.01.T01:five_prime_UTR 25.0%
!!! TCTTATGGTTCTAAAATTTC+TGG - Chr1:101220334-101220353 MsG0180006196.01.T01:intron 25.0%
!!! TCTTATTTTGTTAACTGGAT+AGG + Chr1:101223362-101223381 None:intergenic 25.0%
!!! TGATTTTGATTCCATAGTAT+TGG - Chr1:101218138-101218157 MsG0180006196.01.T01:CDS 25.0%
AAAATTGACATATTTGCAGC+AGG + Chr1:101219135-101219154 None:intergenic 30.0%
AAACACACAAGCTATTCAAA+GGG + Chr1:101220874-101220893 None:intergenic 30.0%
AAACATAAACAAACAAGGAG+GGG + Chr1:101222089-101222108 None:intergenic 30.0%
AAATTACTCATCTTGACCTT+TGG + Chr1:101222703-101222722 None:intergenic 30.0%
AACAGAAAATTCATCCTCTT+AGG + Chr1:101219671-101219690 None:intergenic 30.0%
AACATTGCAGTATATCATGA+TGG + Chr1:101223529-101223548 None:intergenic 30.0%
AAGTAACCTTAGCACATTAA+AGG - Chr1:101219434-101219453 MsG0180006196.01.T01:intron 30.0%
AATATTGATATACCAGATGC+TGG + Chr1:101223636-101223655 None:intergenic 30.0%
AATTATGGTGACATTACCAA+CGG - Chr1:101222463-101222482 MsG0180006196.01.T01:five_prime_UTR 30.0%
ACAGTTACAAGATATAACGA+AGG + Chr1:101218207-101218226 None:intergenic 30.0%
ACCAAATCGTCTTACTATTA+GGG + Chr1:101220962-101220981 None:intergenic 30.0%
ACCAAATCGTCTTTACTATT+AGG + Chr1:101220789-101220808 None:intergenic 30.0%
AGATGAAGGCAATCTTAAAA+TGG - Chr1:101222492-101222511 MsG0180006196.01.T01:five_prime_UTR 30.0%
ATCATATAAGGATGCAATAG+AGG - Chr1:101221446-101221465 MsG0180006196.01.T01:CDS 30.0%
ATCGCTTGGTTAAAAATCTT+AGG - Chr1:101223503-101223522 MsG0180006196.01.T01:five_prime_UTR 30.0%
ATTAAGTTCGGATTGATATC+AGG + Chr1:101219923-101219942 None:intergenic 30.0%
CAAAGCACATATAAGACAAT+TGG + Chr1:101219804-101219823 None:intergenic 30.0%
CAATGAATCATTGTTGTCTT+TGG + Chr1:101218026-101218045 None:intergenic 30.0%
CAGAGAAAGATGTATAACTA+TGG + Chr1:101218956-101218975 None:intergenic 30.0%
CCAAATCGTCTTTACTATTA+GGG + Chr1:101220788-101220807 None:intergenic 30.0%
CCAGGAAACATATTTATTAG+AGG + Chr1:101219294-101219313 None:intergenic 30.0%
CCTCTAATAAATATGTTTCC+TGG - Chr1:101219291-101219310 MsG0180006196.01.T01:intron 30.0%
CTTTAAATCGTAGATCAGTT+TGG - Chr1:101220581-101220600 MsG0180006196.01.T01:intron 30.0%
GGAATACGACATATATTGTA+GGG + Chr1:101219523-101219542 None:intergenic 30.0%
GTGCCAAACTTGAATATTAT+GGG - Chr1:101220908-101220927 MsG0180006196.01.T01:intron 30.0%
GTGGATGATAATAATGTTAG+CGG - Chr1:101221678-101221697 MsG0180006196.01.T01:CDS 30.0%
GTTATACATCTTTCTCTGAA+TGG - Chr1:101218958-101218977 MsG0180006196.01.T01:intron 30.0%
TAAATCCAACACCAATACTA+TGG + Chr1:101218152-101218171 None:intergenic 30.0%
TACAATATATGTCGTATTCC+AGG - Chr1:101219523-101219542 MsG0180006196.01.T01:intron 30.0%
TATTGTGTTTGTGTAGTTCA+AGG - Chr1:101220050-101220069 MsG0180006196.01.T01:intron 30.0%
TCAAAATGAGGATTAGATTC+AGG + Chr1:101219611-101219630 None:intergenic 30.0%
TCTGTTTATTAATGTTGACC+TGG + Chr1:101219544-101219563 None:intergenic 30.0%
TGGAATACGACATATATTGT+AGG + Chr1:101219524-101219543 None:intergenic 30.0%
TGGTAAGTTCATACTTTACT+TGG - Chr1:101220007-101220026 MsG0180006196.01.T01:intron 30.0%
TGTAATGAAAGCAAAACTGA+AGG - Chr1:101219961-101219980 MsG0180006196.01.T01:intron 30.0%
TGTACTTTCTTCTGAATTTG+AGG + Chr1:101219028-101219047 None:intergenic 30.0%
TGTATGGGGATAATAAATAC+AGG - Chr1:101221822-101221841 MsG0180006196.01.T01:CDS 30.0%
TGTGCCAAACTTGAATATTA+TGG - Chr1:101220907-101220926 MsG0180006196.01.T01:intron 30.0%
TTTAATGTGCTAAGGTTACT+TGG + Chr1:101219435-101219454 None:intergenic 30.0%
TTTATTAGAGGAGCAAATTG+TGG + Chr1:101219282-101219301 None:intergenic 30.0%
! AAAAGGAGCATAAGAAACTA+AGG - Chr1:101222605-101222624 MsG0180006196.01.T01:intron 30.0%
! ATTATTATGATAATGAGGCC+AGG - Chr1:101217972-101217991 MsG0180006196.01.T01:CDS 30.0%
! CATTAACATCAACTCTAAAG+CGG + Chr1:101222954-101222973 None:intergenic 30.0%
! CTTCTTTTATGCCTTTATCT+TGG - Chr1:101218057-101218076 MsG0180006196.01.T01:CDS 30.0%
! TTATTATGATAATGAGGCCA+GGG - Chr1:101217973-101217992 MsG0180006196.01.T01:CDS 30.0%
! TTGATTAAAGGGTATAACCT+CGG - Chr1:101221656-101221675 MsG0180006196.01.T01:intron 30.0%
!! ATTAACATCAACTCTAAAGC+GGG + Chr1:101222953-101222972 None:intergenic 30.0%
!! TTAGCTTGCTTGAATATTGT+AGG - Chr1:101220735-101220754 MsG0180006196.01.T01:intron 30.0%
!!! TATTATTTTGATCCAGCATC+TGG - Chr1:101223621-101223640 MsG0180006196.01.T01:five_prime_UTR 30.0%
!!! TGTTTTTGGTCAACCTTATT+AGG - Chr1:101223333-101223352 MsG0180006196.01.T01:five_prime_UTR 30.0%
AAAAAAGTGATGTGTCCATG+TGG - Chr1:101220169-101220188 MsG0180006196.01.T01:intron 35.0%
AAAAAGTGATGTGTCCATGT+GGG - Chr1:101220170-101220189 MsG0180006196.01.T01:intron 35.0%
AACATTATTATCATCCACCG+AGG + Chr1:101221676-101221695 None:intergenic 35.0%
ACAAATGGACACTTCCTAAA+TGG + Chr1:101223476-101223495 None:intergenic 35.0%
ACAAGTGTGTCCAATGTATT+TGG + Chr1:101222892-101222911 None:intergenic 35.0%
ACATGGACAATGTTCCAAAT+GGG + Chr1:101221037-101221056 None:intergenic 35.0%
ACCTCTCAAGCTAACTAAAA+AGG - Chr1:101222588-101222607 MsG0180006196.01.T01:intron 35.0%
ACTAACAGAGTCTACATTCA+AGG + Chr1:101222197-101222216 None:intergenic 35.0%
ACTAACGAAGTCTGCATTTA+GGG - Chr1:101222269-101222288 MsG0180006196.01.T01:CDS 35.0%
ACTAATGGAGTCTACATTCA+GGG - Chr1:101222237-101222256 MsG0180006196.01.T01:intron 35.0%
ACTTACAGAGTCTACATTCA+GGG - Chr1:101222301-101222320 MsG0180006196.01.T01:exon 35.0%
AGACTCTGTTAGTCAATTTC+AGG - Chr1:101222204-101222223 MsG0180006196.01.T01:intron 35.0%
AGCAAGTCAATTAAGAGGTA+TGG - Chr1:101223045-101223064 MsG0180006196.01.T01:intron 35.0%
AGCCATGTAATCACCTTAAA+CGG + Chr1:101221013-101221032 None:intergenic 35.0%
AGTTAATGAGTGAGGTGTAT+GGG - Chr1:101221807-101221826 MsG0180006196.01.T01:CDS 35.0%
ATTAGGATAGGCTATCAGTT+CGG - Chr1:101220615-101220634 MsG0180006196.01.T01:intron 35.0%
CAAACACACAAGCTATTCAA+AGG + Chr1:101220875-101220894 None:intergenic 35.0%
CAAGTGTGTCCAATGTATTT+GGG + Chr1:101222891-101222910 None:intergenic 35.0%
CAATTAACGATAGAAAGGGA+GGG - Chr1:101217541-101217560 MsG0180006196.01.T01:three_prime_UTR 35.0%
CACCAAATCGTCTTACTATT+AGG + Chr1:101220963-101220982 None:intergenic 35.0%
CACCCAATTAACGATAGAAA+GGG - Chr1:101217537-101217556 MsG0180006196.01.T01:three_prime_UTR 35.0%
CATCAAAATTCACGACACTT+TGG - Chr1:101220695-101220714 MsG0180006196.01.T01:intron 35.0%
CATGATTATACTCTGTTAGC+TGG - Chr1:101218889-101218908 MsG0180006196.01.T01:intron 35.0%
CCAGAATCCTTGTAAAGTAT+AGG + Chr1:101221611-101221630 None:intergenic 35.0%
CCATTTAAGTACCCTACAAT+GGG - Chr1:101221373-101221392 MsG0180006196.01.T01:intron 35.0%
CCCTAATAGTAAAGACGATT+TGG - Chr1:101220785-101220804 MsG0180006196.01.T01:intron 35.0%
CCTATACTTTACAAGGATTC+TGG - Chr1:101221608-101221627 MsG0180006196.01.T01:intron 35.0%
CCTCTTTGAGTAGAATCAAA+GGG + Chr1:101221524-101221543 None:intergenic 35.0%
CTAATAGGTACTCAACCATA+CGG + Chr1:101220127-101220146 None:intergenic 35.0%
CTCCCTTTCTATCGTTAATT+GGG + Chr1:101217542-101217561 None:intergenic 35.0%
CTTGCAAATCTAGTATTGTC+CGG - Chr1:101222009-101222028 MsG0180006196.01.T01:CDS 35.0%
CTTTCTATCGTTAATTGGGT+GGG + Chr1:101217538-101217557 None:intergenic 35.0%
GAAGAGAGAAATGCATTCAT+TGG - Chr1:101218533-101218552 MsG0180006196.01.T01:CDS 35.0%
GACGATTTCTTTCCTATTCA+GGG - Chr1:101222361-101222380 MsG0180006196.01.T01:five_prime_UTR 35.0%
GACTCTGTTAGTCAATTTCA+GGG - Chr1:101222205-101222224 MsG0180006196.01.T01:intron 35.0%
GATGATAATAATGTTAGCGG+AGG - Chr1:101221681-101221700 MsG0180006196.01.T01:CDS 35.0%
GCTACTAAAATCTAAGCTGA+AGG - Chr1:101217495-101217514 MsG0180006196.01.T01:three_prime_UTR 35.0%
GCTTAGTGTTGTAACAAACT+TGG - Chr1:101221948-101221967 MsG0180006196.01.T01:CDS 35.0%
GGATCAACCACAATAAATGA+AGG + Chr1:101220653-101220672 None:intergenic 35.0%
GTAATCGAAGATACCTTGAT+AGG + Chr1:101218656-101218675 None:intergenic 35.0%
GTAGAATCAAAGGGTTGAAA+AGG + Chr1:101221515-101221534 None:intergenic 35.0%
GTTAAGGAGGAAGTTACTAA+TGG - Chr1:101217995-101218014 MsG0180006196.01.T01:CDS 35.0%
TACATGGACAATGTTCCAAA+TGG + Chr1:101221038-101221057 None:intergenic 35.0%
TACTCACCTTTAATGTGCTA+AGG + Chr1:101219443-101219462 None:intergenic 35.0%
TACTTTACAAGGATTCTGGT+TGG - Chr1:101221612-101221631 MsG0180006196.01.T01:intron 35.0%
TAGTATTAACAGCTCTCATG+AGG - Chr1:101218700-101218719 MsG0180006196.01.T01:intron 35.0%
TAGTTAATGAGTGAGGTGTA+TGG - Chr1:101221806-101221825 MsG0180006196.01.T01:CDS 35.0%
TATATGCCTGTTTAACCGTA+TGG - Chr1:101220109-101220128 MsG0180006196.01.T01:intron 35.0%
TCATACTTTACTTGGACTAC+TGG - Chr1:101220015-101220034 MsG0180006196.01.T01:intron 35.0%
TCCATTTAAGTACCCTACAA+TGG - Chr1:101221372-101221391 MsG0180006196.01.T01:intron 35.0%
TCCCTAATAGTAAGACGATT+TGG - Chr1:101220958-101220977 MsG0180006196.01.T01:intron 35.0%
TCCTCTTTGAGTAGAATCAA+AGG + Chr1:101221525-101221544 None:intergenic 35.0%
TCTGGAAAATCTAGTACAGA+TGG - Chr1:101218725-101218744 MsG0180006196.01.T01:intron 35.0%
TCTTAGGTGGTGATATATCT+CGG - Chr1:101220236-101220255 MsG0180006196.01.T01:intron 35.0%
TGACGATTTCTTTCCTATTC+AGG - Chr1:101222360-101222379 MsG0180006196.01.T01:five_prime_UTR 35.0%
TTATGCTTAGGCGTATCAAT+TGG - Chr1:101223073-101223092 MsG0180006196.01.T01:intron 35.0%
TTGCAATTTCTCTGCATTCA+GGG + Chr1:101222168-101222187 None:intergenic 35.0%
TTGGAACATTGTCCATGTAT+GGG - Chr1:101221039-101221058 MsG0180006196.01.T01:intron 35.0%
TTGTGCTTTCCATTCTCTTA+TGG - Chr1:101220319-101220338 MsG0180006196.01.T01:intron 35.0%
TTTCGATGACCCAAATACAT+TGG - Chr1:101222879-101222898 MsG0180006196.01.T01:intron 35.0%
TTTGCAATTTCTCTGCATTC+AGG + Chr1:101222169-101222188 None:intergenic 35.0%
! AAAAGGGAGATTAGTCACTT+TGG + Chr1:101222388-101222407 None:intergenic 35.0%
! AATTTTCTGTTTGTGGAGGA+AGG - Chr1:101219680-101219699 MsG0180006196.01.T01:intron 35.0%
! ACCACTCAATATCTGGAATT+GGG + Chr1:101219988-101220007 None:intergenic 35.0%
! ACTTTTATGTGGAACATCCT+CGG - Chr1:101222524-101222543 MsG0180006196.01.T01:five_prime_UTR 35.0%
! AGAAGAGCTTTTACCGTTTA+AGG - Chr1:101220997-101221016 MsG0180006196.01.T01:intron 35.0%
! ATAAGAGAATGGAAAGCACA+AGG + Chr1:101220320-101220339 None:intergenic 35.0%
! ATATTTAGAGCAAGGAGACA+GGG - Chr1:101221779-101221798 MsG0180006196.01.T01:CDS 35.0%
! ATCAATTTTGTGTCTGTCAC+CGG - Chr1:101218318-101218337 MsG0180006196.01.T01:CDS 35.0%
! CTTCTGCATTCTGGAAATTA+TGG - Chr1:101222448-101222467 MsG0180006196.01.T01:five_prime_UTR 35.0%
! GAGGATGAATTTTCTGTTTG+TGG - Chr1:101219673-101219692 MsG0180006196.01.T01:intron 35.0%
! GATGAATTTTCTGTTTGTGG+AGG - Chr1:101219676-101219695 MsG0180006196.01.T01:intron 35.0%
! GCAAGTCAATTAAGAGGTAT+GGG - Chr1:101223046-101223065 MsG0180006196.01.T01:intron 35.0%
! GTAAAGTTTTTGTGGATGCT+GGG - Chr1:101223244-101223263 MsG0180006196.01.T01:five_prime_UTR 35.0%
! GTTTAAGACCTCAAATGTGA+GGG - Chr1:101220197-101220216 MsG0180006196.01.T01:intron 35.0%
! TAAAGTTTTTGTGGATGCTG+GGG - Chr1:101223245-101223264 MsG0180006196.01.T01:five_prime_UTR 35.0%
! TACCGTTTAAGGTGATTACA+TGG - Chr1:101221008-101221027 MsG0180006196.01.T01:intron 35.0%
! TATATTTAGAGCAAGGAGAC+AGG - Chr1:101221778-101221797 MsG0180006196.01.T01:CDS 35.0%
! TCACATTTGAGGTCTTAAAC+AGG + Chr1:101220197-101220216 None:intergenic 35.0%
! TCAGAAGAAAGTACACAGTT+TGG - Chr1:101219033-101219052 MsG0180006196.01.T01:intron 35.0%
! TGACTACTCTTTTCTCATTC+AGG + Chr1:101222138-101222157 None:intergenic 35.0%
! TGGCCCATAATATTCAAGTT+TGG + Chr1:101220914-101220933 None:intergenic 35.0%
! TGTTTAAGACCTCAAATGTG+AGG - Chr1:101220196-101220215 MsG0180006196.01.T01:intron 35.0%
! TTTAAGACCCGATACCTATT+AGG - Chr1:101221075-101221094 MsG0180006196.01.T01:intron 35.0%
! TTTGGAACATTGTCCATGTA+TGG - Chr1:101221038-101221057 MsG0180006196.01.T01:intron 35.0%
!! AATTCTTTTGGAGGTCCTAT+AGG - Chr1:101221114-101221133 MsG0180006196.01.T01:intron 35.0%
!! CCTCATTTTGATGAGAGAAT+GGG - Chr1:101219620-101219639 MsG0180006196.01.T01:intron 35.0%
!! TCCTCATTTTGATGAGAGAA+TGG - Chr1:101219619-101219638 MsG0180006196.01.T01:intron 35.0%
!! TGATTCCATAGTATTGGTGT+TGG - Chr1:101218144-101218163 MsG0180006196.01.T01:CDS 35.0%
!!! AACGCCCTTATTTTCATTTG+TGG + Chr1:101218681-101218700 None:intergenic 35.0%
!!! GAATTTGTTGGAAGGTCTTT+TGG - Chr1:101220431-101220450 MsG0180006196.01.T01:intron 35.0%
!!! TCCTTTTTAGTTAGCTTGAG+AGG + Chr1:101222592-101222611 None:intergenic 35.0%
!!! TTTCTCACACTTTTTCGTGT+AGG - Chr1:101223592-101223611 MsG0180006196.01.T01:five_prime_UTR 35.0%
AAAAGAATTCTCCCCAATGG+GGG + Chr1:101221103-101221122 None:intergenic 40.0%
AACATTGTCCATGTATGGGA+GGG - Chr1:101221043-101221062 MsG0180006196.01.T01:intron 40.0%
AAGAAGGAACGTAGGAGATT+TGG - Chr1:101217926-101217945 MsG0180006196.01.T01:CDS 40.0%
AAGCATCCCATTCTTAAGTG+GGG - Chr1:101221153-101221172 MsG0180006196.01.T01:CDS 40.0%
AAGCTCTTCTTGATGTTGCT+TGG + Chr1:101220987-101221006 None:intergenic 40.0%
ACAACGAAGCACATTTCTCT+CGG + Chr1:101218438-101218457 None:intergenic 40.0%
ACACACTTGTCTCACTTTAC+AGG - Chr1:101222902-101222921 MsG0180006196.01.T01:intron 40.0%
ACCAACGGTACTATAGATGA+AGG - Chr1:101222478-101222497 MsG0180006196.01.T01:five_prime_UTR 40.0%
ACCAGAACACATTTATTGGC+CGG + Chr1:101223150-101223169 None:intergenic 40.0%
ACCCAATTCCAGATATTGAG+TGG - Chr1:101219984-101220003 MsG0180006196.01.T01:intron 40.0%
ACTCAACCATACGGTTAAAC+AGG + Chr1:101220118-101220137 None:intergenic 40.0%
ACTGATAGCCTATCCTAATC+AGG + Chr1:101220614-101220633 None:intergenic 40.0%
ACTGGATAGGCATCCTAATA+AGG + Chr1:101223349-101223368 None:intergenic 40.0%
ACTTACCACCACTCAATATC+TGG + Chr1:101219995-101220014 None:intergenic 40.0%
AGAAGGAACGTAGGAGATTT+GGG - Chr1:101217927-101217946 MsG0180006196.01.T01:CDS 40.0%
ATACGATAGAGACGAAAGAG+AGG - Chr1:101217760-101217779 MsG0180006196.01.T01:three_prime_UTR 40.0%
ATAGAGAACATAGCGAGGAT+CGG - Chr1:101217867-101217886 MsG0180006196.01.T01:CDS 40.0%
ATCATTGACCACAGGAAACA+AGG + Chr1:101223397-101223416 None:intergenic 40.0%
ATGCAATTGGTGTGTCAGTT+AGG - Chr1:101221867-101221886 MsG0180006196.01.T01:CDS 40.0%
ATTAGCGTTGTTGTGGTTGA+AGG - Chr1:101223018-101223037 MsG0180006196.01.T01:intron 40.0%
CAAAAGAATTCTCCCCAATG+GGG + Chr1:101221104-101221123 None:intergenic 40.0%
CAAGCATCCCATTCTTAAGT+GGG - Chr1:101221152-101221171 MsG0180006196.01.T01:CDS 40.0%
CAATTCCAGATATTGAGTGG+TGG - Chr1:101219987-101220006 MsG0180006196.01.T01:intron 40.0%
CACACTTGTCTCACTTTACA+GGG - Chr1:101222903-101222922 MsG0180006196.01.T01:intron 40.0%
CCAAAAGAATTCTCCCCAAT+GGG + Chr1:101221105-101221124 None:intergenic 40.0%
CCAATAAATGTGTTCTGGTG+TGG - Chr1:101223151-101223170 MsG0180006196.01.T01:five_prime_UTR 40.0%
CCAATTAACGATAGAAAGGG+AGG - Chr1:101217540-101217559 MsG0180006196.01.T01:three_prime_UTR 40.0%
CCACACCAGAACACATTTAT+TGG + Chr1:101223154-101223173 None:intergenic 40.0%
CCACCCAATTAACGATAGAA+AGG - Chr1:101217536-101217555 MsG0180006196.01.T01:three_prime_UTR 40.0%
CCCATTCTCTCATCAAAATG+AGG + Chr1:101219623-101219642 None:intergenic 40.0%
CCCTTTGATTCTACTCAAAG+AGG - Chr1:101221521-101221540 MsG0180006196.01.T01:CDS 40.0%
CCTCCCTTTCTATCGTTAAT+TGG + Chr1:101217543-101217562 None:intergenic 40.0%
CCTTTCTATCGTTAATTGGG+TGG + Chr1:101217539-101217558 None:intergenic 40.0%
CGAAGATACCTTGATAGGAA+AGG + Chr1:101218651-101218670 None:intergenic 40.0%
CGTATGGTTGAGTACCTATT+AGG - Chr1:101220125-101220144 MsG0180006196.01.T01:intron 40.0%
CGTCTTTACTATTAGGGAGT+TGG + Chr1:101220782-101220801 None:intergenic 40.0%
CTCCAAATTTACTCTGCATG+AGG + Chr1:101219841-101219860 None:intergenic 40.0%
CTGATAGCCTATCCTAATCA+GGG + Chr1:101220613-101220632 None:intergenic 40.0%
CTTAGGTGGTGATATATCTC+GGG - Chr1:101220237-101220256 MsG0180006196.01.T01:intron 40.0%
GAAAGATAGAGAACATAGCG+AGG - Chr1:101217862-101217881 MsG0180006196.01.T01:CDS 40.0%
GAACCTATTGAAGCTCGATT+TGG + Chr1:101223190-101223209 None:intergenic 40.0%
GAACTTTCTCGCTTCCATTT+AGG - Chr1:101223459-101223478 MsG0180006196.01.T01:five_prime_UTR 40.0%
GAAGCTGAAGAAAATTCCTC+AGG - Chr1:101218844-101218863 MsG0180006196.01.T01:intron 40.0%
GACTAACGAAGTCTGCATTT+AGG - Chr1:101222268-101222287 MsG0180006196.01.T01:CDS 40.0%
GACTAATGGAGTCTACATTC+AGG - Chr1:101222236-101222255 MsG0180006196.01.T01:intron 40.0%
GACTTACAGAGTCTACATTC+AGG - Chr1:101222300-101222319 MsG0180006196.01.T01:exon 40.0%
GATAATAATGTTAGCGGAGG+TGG - Chr1:101221684-101221703 MsG0180006196.01.T01:CDS 40.0%
GATACCTTGATAGGAAAGGA+AGG + Chr1:101218647-101218666 None:intergenic 40.0%
GATACTTCGAGTATCCACAA+TGG + Chr1:101221404-101221423 None:intergenic 40.0%
GGACGTGAAATAGATGAACA+TGG - Chr1:101219387-101219406 MsG0180006196.01.T01:intron 40.0%
GGGTTGTTAGTTAATGAGTG+AGG - Chr1:101221799-101221818 MsG0180006196.01.T01:CDS 40.0%
GGTATGGGAAACTTATGCTT+AGG - Chr1:101223061-101223080 MsG0180006196.01.T01:intron 40.0%
GTGGAAGCAAGTCAATTAAG+AGG - Chr1:101223040-101223059 MsG0180006196.01.T01:intron 40.0%
GTTAATGAGTGAGGTGTATG+GGG - Chr1:101221808-101221827 MsG0180006196.01.T01:CDS 40.0%
TACGATAGAGACGAAAGAGA+GGG - Chr1:101217761-101217780 MsG0180006196.01.T01:three_prime_UTR 40.0%
TACTTTACATACACTGGGCT+AGG + Chr1:101221760-101221779 None:intergenic 40.0%
TAGTAGTGATGCCTTAGCAA+AGG - Chr1:101218784-101218803 MsG0180006196.01.T01:intron 40.0%
TATAAGGATGCAATAGAGGC+AGG - Chr1:101221450-101221469 MsG0180006196.01.T01:CDS 40.0%
TCACCGACACTTCTAATCAA+AGG - Chr1:101218263-101218282 MsG0180006196.01.T01:CDS 40.0%
TCAGGGACTAAAGTGACTAA+TGG - Chr1:101222222-101222241 MsG0180006196.01.T01:intron 40.0%
TCATTGACCACAGGAAACAA+GGG + Chr1:101223396-101223415 None:intergenic 40.0%
TCCAAAAGAATTCTCCCCAA+TGG + Chr1:101221106-101221125 None:intergenic 40.0%
TCTACAACTGCTGGAAAACT+TGG - Chr1:101218752-101218771 MsG0180006196.01.T01:intron 40.0%
TCTATCTTTCCTCTTATGCG+AGG + Chr1:101217852-101217871 None:intergenic 40.0%
TCTCCATTGTAGATGCTCTT+AGG - Chr1:101220220-101220239 MsG0180006196.01.T01:intron 40.0%
TGAAATGTGTTCAGCAACAC+AGG + Chr1:101223661-101223680 None:intergenic 40.0%
TGATGGTATTAGCGTTGTTG+TGG - Chr1:101223011-101223030 MsG0180006196.01.T01:intron 40.0%
TGATTACATGGCTACCCATT+TGG - Chr1:101221020-101221039 MsG0180006196.01.T01:intron 40.0%
TGCCTCATGCAGAGTAAATT+TGG - Chr1:101219836-101219855 MsG0180006196.01.T01:intron 40.0%
TGTTTCAGCAAGGGAAGATT+AGG - Chr1:101221480-101221499 MsG0180006196.01.T01:CDS 40.0%
TGTTTGTGGAGGAAGGAAAA+TGG - Chr1:101219687-101219706 MsG0180006196.01.T01:intron 40.0%
TTAGGATAGGCTATCAGTTC+GGG - Chr1:101220616-101220635 MsG0180006196.01.T01:intron 40.0%
TTAGGTGGTGATATATCTCG+GGG - Chr1:101220238-101220257 MsG0180006196.01.T01:intron 40.0%
TTCACTCCATCACACATCTT+TGG + Chr1:101220414-101220433 None:intergenic 40.0%
TTCATCTATTTCACGTCCCT+GGG + Chr1:101219385-101219404 None:intergenic 40.0%
TTGCCAAATCGAGCTTCAAT+AGG - Chr1:101223184-101223203 MsG0180006196.01.T01:five_prime_UTR 40.0%
TTGTAGACATCATTGACCAC+AGG + Chr1:101223405-101223424 None:intergenic 40.0%
! ACATGTGTTAAGTATCGTGC+AGG + Chr1:101218291-101218310 None:intergenic 40.0%
! AGCTGCTCGTAAAGTTTTTG+TGG - Chr1:101223236-101223255 MsG0180006196.01.T01:five_prime_UTR 40.0%
! AGCTTCAAAGTTGGTTGCAT+TGG + Chr1:101219211-101219230 None:intergenic 40.0%
! ATGTATTTTCTCCACAGCCT+GGG + Chr1:101221905-101221924 None:intergenic 40.0%
! ATTAAAGGGTATAACCTCGG+TGG - Chr1:101221659-101221678 MsG0180006196.01.T01:intron 40.0%
! ATTGGGGAGAATTCTTTTGG+AGG - Chr1:101221105-101221124 MsG0180006196.01.T01:intron 40.0%
! CACCACTCAATATCTGGAAT+TGG + Chr1:101219989-101220008 None:intergenic 40.0%
! CCCATTGTAGGGTACTTAAA+TGG + Chr1:101221376-101221395 None:intergenic 40.0%
! CGTAAAGTTTTTGTGGATGC+TGG - Chr1:101223243-101223262 MsG0180006196.01.T01:five_prime_UTR 40.0%
! CTCCTTAGCTATACGCTTTT+GGG + Chr1:101222632-101222651 None:intergenic 40.0%
! GTGCCTTTGATTAGAAGTGT+CGG + Chr1:101218269-101218288 None:intergenic 40.0%
! GTGTGATGGAGTGAATTTGT+TGG - Chr1:101220419-101220438 MsG0180006196.01.T01:intron 40.0%
! TATGTATTTTCTCCACAGCC+TGG + Chr1:101221906-101221925 None:intergenic 40.0%
! TCGTTAATTGGGTGGGATTT+TGG + Chr1:101217531-101217550 None:intergenic 40.0%
! TCTCCTTAGCTATACGCTTT+TGG + Chr1:101222633-101222652 None:intergenic 40.0%
! TTAGTTAGCTTGAGAGGTTG+AGG + Chr1:101222586-101222605 None:intergenic 40.0%
!! CTCATCTTGACCTTTGGTTT+TGG + Chr1:101222697-101222716 None:intergenic 40.0%
!! CTTTTGGTTGCATTGGAAGA+TGG - Chr1:101220447-101220466 MsG0180006196.01.T01:intron 40.0%
!! GATGGAGTGAATTTGTTGGA+AGG - Chr1:101220423-101220442 MsG0180006196.01.T01:intron 40.0%
!! GTTTGATGTGTGCTGTTTCA+GGG - Chr1:101218557-101218576 MsG0180006196.01.T01:CDS 40.0%
!! TACGTACTTCCTTTTCAAGC+CGG + Chr1:101222765-101222784 None:intergenic 40.0%
!! TGTTTGATGTGTGCTGTTTC+AGG - Chr1:101218556-101218575 MsG0180006196.01.T01:CDS 40.0%
!!! ACAGGTTGAGCTGTTTTGAT+AGG - Chr1:101221840-101221859 MsG0180006196.01.T01:CDS 40.0%
!!! AGGTTGAGCTGTTTTGATAG+GGG - Chr1:101221842-101221861 MsG0180006196.01.T01:CDS 40.0%
!!! ATCTTGACCTTTGGTTTTGG+CGG + Chr1:101222694-101222713 None:intergenic 40.0%
!!! CAGGTTGAGCTGTTTTGATA+GGG - Chr1:101221841-101221860 MsG0180006196.01.T01:CDS 40.0%
AAACCGTTTGACTGGATGTG+CGG - Chr1:101222981-101223000 MsG0180006196.01.T01:intron 45.0%
AAAGAGAGGGTAGCAAAGGT+AGG - Chr1:101217774-101217793 MsG0180006196.01.T01:three_prime_UTR 45.0%
AAATGACCTCTCTCATCCCA+AGG - Chr1:101222927-101222946 MsG0180006196.01.T01:intron 45.0%
AAATGTGTTCTGGTGTGGCA+AGG - Chr1:101223156-101223175 MsG0180006196.01.T01:five_prime_UTR 45.0%
AACAGCTCTCATGAGGATTC+TGG - Chr1:101218707-101218726 MsG0180006196.01.T01:intron 45.0%
AATAAAATGGAGACGAGCGC+TGG - Chr1:101220812-101220831 MsG0180006196.01.T01:intron 45.0%
AATCACAGAGAAGACCGAGA+AGG - Chr1:101217717-101217736 MsG0180006196.01.T01:three_prime_UTR 45.0%
AATGGAGACCCTCACATTTG+AGG + Chr1:101220208-101220227 None:intergenic 45.0%
AATTGGTGTGTCAGTTAGGC+GGG - Chr1:101221871-101221890 MsG0180006196.01.T01:CDS 45.0%
ACAATGGAGACACCCATTGT+AGG + Chr1:101221388-101221407 None:intergenic 45.0%
ACAGCTTGGTCCCAATAATG+AGG + Chr1:101223273-101223292 None:intergenic 45.0%
ACCTATTAGGTACCCCCATT+GGG - Chr1:101221088-101221107 MsG0180006196.01.T01:intron 45.0%
ACCTTGATAGGAAAGGAAGG+AGG + Chr1:101218644-101218663 None:intergenic 45.0%
ACGAGAGAGACAAATCCGAT+AGG - Chr1:101217598-101217617 MsG0180006196.01.T01:three_prime_UTR 45.0%
ACGTCTGACAGCTTCAAAGT+TGG + Chr1:101219220-101219239 None:intergenic 45.0%
ACTCCATCACACATCTTTGG+TGG + Chr1:101220411-101220430 None:intergenic 45.0%
AGAGTGCACAAGAGATTAGG+AGG - Chr1:101220553-101220572 MsG0180006196.01.T01:intron 45.0%
AGATTCAGACGATGACAAGC+CGG - Chr1:101223128-101223147 MsG0180006196.01.T01:five_prime_UTR 45.0%
AGCAGAGTGCACAAGAGATT+AGG - Chr1:101220550-101220569 MsG0180006196.01.T01:intron 45.0%
AGCTCAAGCAAAAGAGCAGA+AGG - Chr1:101219862-101219881 MsG0180006196.01.T01:intron 45.0%
AGGTAAGGGATGTTTCAGCA+AGG - Chr1:101221470-101221489 MsG0180006196.01.T01:CDS 45.0%
AGTAACTTCCTCCTTAACCC+TGG + Chr1:101217993-101218012 None:intergenic 45.0%
AGTGCACAAGAGATTAGGAG+GGG - Chr1:101220555-101220574 MsG0180006196.01.T01:intron 45.0%
AGTTCTCTGACAGCTTCCTT+AGG - Chr1:101218914-101218933 MsG0180006196.01.T01:intron 45.0%
ATGCCACCAAAGATGTGTGA+TGG - Chr1:101220405-101220424 MsG0180006196.01.T01:intron 45.0%
ATGCTGGGGTTCCTCATTAT+TGG - Chr1:101223259-101223278 MsG0180006196.01.T01:five_prime_UTR 45.0%
CAAACAAGCACAGCTAGCAA+AGG - Chr1:101219886-101219905 MsG0180006196.01.T01:intron 45.0%
CAAGATACTCCTCGCATAAG+AGG - Chr1:101217840-101217859 MsG0180006196.01.T01:CDS 45.0%
CAATGGAGACACCCATTGTA+GGG + Chr1:101221387-101221406 None:intergenic 45.0%
CAATTGGTGTGTCAGTTAGG+CGG - Chr1:101221870-101221889 MsG0180006196.01.T01:CDS 45.0%
CATAGAACCGCCAAAACCAA+AGG - Chr1:101222684-101222703 MsG0180006196.01.T01:intron 45.0%
CCAAGCTGTCAACTATACTG+AGG - Chr1:101223284-101223303 MsG0180006196.01.T01:five_prime_UTR 45.0%
CCATTGTAGATGCTCTTAGG+TGG - Chr1:101220223-101220242 MsG0180006196.01.T01:intron 45.0%
CCTCAGTATAGTTGACAGCT+TGG + Chr1:101223287-101223306 None:intergenic 45.0%
CTTTGCTAGCTGTGCTTGTT+TGG + Chr1:101219888-101219907 None:intergenic 45.0%
GAACATTGTCCATGTATGGG+AGG - Chr1:101221042-101221061 MsG0180006196.01.T01:intron 45.0%
GAAGGAACGTAGGAGATTTG+GGG - Chr1:101217928-101217947 MsG0180006196.01.T01:CDS 45.0%
GAGCAAATTGTGGATCATGG+CGG + Chr1:101219272-101219291 None:intergenic 45.0%
GAGGAGCAAATTGTGGATCA+TGG + Chr1:101219275-101219294 None:intergenic 45.0%
GAGTGCACAAGAGATTAGGA+GGG - Chr1:101220554-101220573 MsG0180006196.01.T01:intron 45.0%
GATGCAATAGAGGCAGGTAA+GGG - Chr1:101221456-101221475 MsG0180006196.01.T01:CDS 45.0%
GATGGATCATCTACAACTGC+TGG - Chr1:101218743-101218762 MsG0180006196.01.T01:intron 45.0%
GCAAGCATCCCATTCTTAAG+TGG - Chr1:101221151-101221170 MsG0180006196.01.T01:CDS 45.0%
GCCTTCATCTATAGTACCGT+TGG + Chr1:101222482-101222501 None:intergenic 45.0%
GCTCAAGAAAACCGTTTGAC+TGG - Chr1:101222973-101222992 MsG0180006196.01.T01:intron 45.0%
GCTTAGGCGTATCAATTGGA+CGG - Chr1:101223077-101223096 MsG0180006196.01.T01:five_prime_UTR 45.0%
GGAGCTGCCTTCATTTATTG+TGG - Chr1:101220643-101220662 MsG0180006196.01.T01:intron 45.0%
GGTAAGGGATGTTTCAGCAA+GGG - Chr1:101221471-101221490 MsG0180006196.01.T01:CDS 45.0%
GTATCTCCCAAACCCTAACA+TGG - Chr1:101217575-101217594 MsG0180006196.01.T01:three_prime_UTR 45.0%
GTGACAACCCTGATTAGGAT+AGG - Chr1:101220603-101220622 MsG0180006196.01.T01:intron 45.0%
GTGGTGCATAACAGAGAAGT+GGG - Chr1:101221703-101221722 MsG0180006196.01.T01:CDS 45.0%
GTTCATCTATTTCACGTCCC+TGG + Chr1:101219386-101219405 None:intergenic 45.0%
GTTGCATTGGAAGATGGCAT+GGG - Chr1:101220453-101220472 MsG0180006196.01.T01:intron 45.0%
TAACGTCTGGTGTAGCAATC+TGG + Chr1:101219317-101219336 None:intergenic 45.0%
TACAATGGGTGTCTCCATTG+TGG - Chr1:101221387-101221406 MsG0180006196.01.T01:CDS 45.0%
TACCTATTAGGTACCCCCAT+TGG - Chr1:101221087-101221106 MsG0180006196.01.T01:intron 45.0%
TAGAGAACATAGCGAGGATC+GGG - Chr1:101217868-101217887 MsG0180006196.01.T01:CDS 45.0%
TAGGTGGTGATATATCTCGG+GGG - Chr1:101220239-101220258 MsG0180006196.01.T01:intron 45.0%
TATAGGGTGAGGCGATTTCA+CGG - Chr1:101220369-101220388 MsG0180006196.01.T01:intron 45.0%
TATCCCTCAGAAACCAACCA+AGG - Chr1:101219338-101219357 MsG0180006196.01.T01:intron 45.0%
TCAGGATCGACATCCAATAC+AGG + Chr1:101219593-101219612 None:intergenic 45.0%
TCCTCCTTCCTTTCCTATCA+AGG - Chr1:101218640-101218659 MsG0180006196.01.T01:CDS 45.0%
TCGACAAAACAAAGCTCCTG+CGG - Chr1:101219645-101219664 MsG0180006196.01.T01:intron 45.0%
TCGATCTCTGTTTCGCCTAT+CGG + Chr1:101217616-101217635 None:intergenic 45.0%
TCTCGTCCATGTTAGGGTTT+GGG + Chr1:101217584-101217603 None:intergenic 45.0%
TGAAGAGAGGGAAGATTCAG+CGG - Chr1:101217814-101217833 MsG0180006196.01.T01:CDS 45.0%
TGCCTTAGCAAAGGCTAAGA+AGG - Chr1:101218793-101218812 MsG0180006196.01.T01:intron 45.0%
TGCTGGGGTTCCTCATTATT+GGG - Chr1:101223260-101223279 MsG0180006196.01.T01:five_prime_UTR 45.0%
TGGTGCATAACAGAGAAGTG+GGG - Chr1:101221704-101221723 MsG0180006196.01.T01:CDS 45.0%
TGTCTCTCTCGTCCATGTTA+GGG + Chr1:101217590-101217609 None:intergenic 45.0%
TTCACGACACTTTGGATGAG+TGG - Chr1:101220703-101220722 MsG0180006196.01.T01:intron 45.0%
TTGATAGGAAAGGAAGGAGG+AGG + Chr1:101218641-101218660 None:intergenic 45.0%
TTGCATTGGAAGATGGCATG+GGG - Chr1:101220454-101220473 MsG0180006196.01.T01:intron 45.0%
TTGTCTCTCTCGTCCATGTT+AGG + Chr1:101217591-101217610 None:intergenic 45.0%
TTTGATAGGGGGGATGCAAT+TGG - Chr1:101221854-101221873 MsG0180006196.01.T01:CDS 45.0%
! AGCCTTCTTAGCCTTTGCTA+AGG + Chr1:101218798-101218817 None:intergenic 45.0%
! AGTCACTTTGGTCCCTGAAT+AGG + Chr1:101222376-101222395 None:intergenic 45.0%
! ATCACACATCTTTGGTGGCA+TGG + Chr1:101220406-101220425 None:intergenic 45.0%
! CACGTTGTTAAGTGTTGTGC+CGG + Chr1:101218340-101218359 None:intergenic 45.0%
! CCCATTGGGGAGAATTCTTT+TGG - Chr1:101221102-101221121 MsG0180006196.01.T01:intron 45.0%
! CTAAGGCATCACTACTAGAG+AGG + Chr1:101218781-101218800 None:intergenic 45.0%
! GACCCAAAAGCGTATAGCTA+AGG - Chr1:101222627-101222646 MsG0180006196.01.T01:intron 45.0%
! GTTTGGTGACAACCCTGATT+AGG - Chr1:101220598-101220617 MsG0180006196.01.T01:intron 45.0%
! TGATAATGAGGCCAGGGTTA+AGG - Chr1:101217979-101217998 MsG0180006196.01.T01:CDS 45.0%
! TGTATTTTCTCCACAGCCTG+GGG + Chr1:101221904-101221923 None:intergenic 45.0%
! TTCTGAGGGATAGTAACGTC+TGG + Chr1:101219330-101219349 None:intergenic 45.0%
! TTTGGATTTTGTCAGGGACG+TGG - Chr1:101222423-101222442 MsG0180006196.01.T01:five_prime_UTR 45.0%
!! ACGTACTTCCTTTTCAAGCC+GGG + Chr1:101222764-101222783 None:intergenic 45.0%
!! AGGAAGTGTCCATTTGTGTG+CGG - Chr1:101223479-101223498 MsG0180006196.01.T01:five_prime_UTR 45.0%
!! CCACCTAAGAGCATCTACAA+TGG + Chr1:101220226-101220245 None:intergenic 45.0%
!! CTCTTATGCGAGGAGTATCT+TGG + Chr1:101217842-101217861 None:intergenic 45.0%
!! CTGGTCCAACTTGCTGTATA+GGG - Chr1:101220353-101220372 MsG0180006196.01.T01:intron 45.0%
!! GGAAGGTCTTTTGGTTGCAT+TGG - Chr1:101220440-101220459 MsG0180006196.01.T01:intron 45.0%
!! TAGGGTTTCTGAAGCGAAGA+AGG - Chr1:101217910-101217929 MsG0180006196.01.T01:CDS 45.0%
!! TCTGGTCCAACTTGCTGTAT+AGG - Chr1:101220352-101220371 MsG0180006196.01.T01:intron 45.0%
!! TGGGGGTACCTAATAGGTAT+CGG + Chr1:101221086-101221105 None:intergenic 45.0%
!!! GGTTGAGCTGTTTTGATAGG+GGG - Chr1:101221843-101221862 MsG0180006196.01.T01:CDS 45.0%
!!! GTTGAGCTGTTTTGATAGGG+GGG - Chr1:101221844-101221863 MsG0180006196.01.T01:CDS 45.0%
!!! TTTTAATATTAAAAAAGTAT+GGG + Chr1:101221238-101221257 None:intergenic 5.0%
!!! TTTTTAATATTAAAAAAGTA+TGG + Chr1:101221239-101221258 None:intergenic 5.0%
AAGACGAAGAACAGGAGCCT+TGG + Chr1:101219358-101219377 None:intergenic 50.0%
AAGCAACTCAAGATCCCACC+CGG - Chr1:101222743-101222762 MsG0180006196.01.T01:intron 50.0%
AAGCACATTTCTCTCGGCTC+AGG + Chr1:101218432-101218451 None:intergenic 50.0%
AATCGAAGCGCGATGAAGAG+AGG - Chr1:101217801-101217820 MsG0180006196.01.T01:exon 50.0%
AATTCATCCTCTTAGGCCGC+AGG + Chr1:101219664-101219683 None:intergenic 50.0%
ACATAGCGAGGATCGGGAAT+TGG - Chr1:101217874-101217893 MsG0180006196.01.T01:CDS 50.0%
AGCACAGCTAGCAAAGGCAA+AGG - Chr1:101219892-101219911 MsG0180006196.01.T01:intron 50.0%
AGCGTTGTTGTGGTTGAAGG+TGG - Chr1:101223021-101223040 MsG0180006196.01.T01:intron 50.0%
AGCTAAGGAGAAAGAGCGAC+AGG - Chr1:101222642-101222661 MsG0180006196.01.T01:intron 50.0%
AGCTGCGTGAGAAGAAGGAA+AGG - Chr1:101222851-101222870 MsG0180006196.01.T01:intron 50.0%
ATAGGAAAGGAAGGAGGAGG+TGG + Chr1:101218638-101218657 None:intergenic 50.0%
ATCGAAGCGCGATGAAGAGA+GGG - Chr1:101217802-101217821 MsG0180006196.01.T01:exon 50.0%
ATTGGTGTGTCAGTTAGGCG+GGG - Chr1:101221872-101221891 MsG0180006196.01.T01:CDS 50.0%
CAAGCGATACCGCACACAAA+TGG + Chr1:101223491-101223510 None:intergenic 50.0%
CATTTGTGTGCGGTATCGCT+TGG - Chr1:101223489-101223508 MsG0180006196.01.T01:five_prime_UTR 50.0%
CCTATTAGGTACCCCCATTG+GGG - Chr1:101221089-101221108 MsG0180006196.01.T01:intron 50.0%
CCTCACCCTATACAGCAAGT+TGG + Chr1:101220361-101220380 None:intergenic 50.0%
CGACAGGAGCTGATTAGACA+GGG - Chr1:101222658-101222677 MsG0180006196.01.T01:intron 50.0%
CTCGGTCTTCTCTGTGATTC+CGG + Chr1:101217716-101217735 None:intergenic 50.0%
CTCTCGTCCATGTTAGGGTT+TGG + Chr1:101217585-101217604 None:intergenic 50.0%
CTGAAGCGAAGAAGGAACGT+AGG - Chr1:101217918-101217937 MsG0180006196.01.T01:CDS 50.0%
CTTGAGACCTTGGGTCCTAT+AGG + Chr1:101221132-101221151 None:intergenic 50.0%
GACGAAAGAGAGGGTAGCAA+AGG - Chr1:101217770-101217789 MsG0180006196.01.T01:three_prime_UTR 50.0%
GATTCCGGTCAGATCGATGA+TGG + Chr1:101217701-101217720 None:intergenic 50.0%
GCCGGCCAATAAATGTGTTC+TGG - Chr1:101223146-101223165 MsG0180006196.01.T01:five_prime_UTR 50.0%
GGAGGATTTACAACAGCAGC+AGG + Chr1:101219159-101219178 None:intergenic 50.0%
GGATGCAATAGAGGCAGGTA+AGG - Chr1:101221455-101221474 MsG0180006196.01.T01:CDS 50.0%
GGATGCTTGCTTGAGACCTT+GGG + Chr1:101221141-101221160 None:intergenic 50.0%
GGTCTTAAACAGGTCCCACA+TGG + Chr1:101220187-101220206 None:intergenic 50.0%
GGTGGTGCATAACAGAGAAG+TGG - Chr1:101221702-101221721 MsG0180006196.01.T01:CDS 50.0%
GGTTGCATTGGAAGATGGCA+TGG - Chr1:101220452-101220471 MsG0180006196.01.T01:intron 50.0%
GTGAGCAGGCTCACATAGAT+AGG - Chr1:101222800-101222819 MsG0180006196.01.T01:intron 50.0%
GTTGTAAATCCTCCAGCCAG+TGG - Chr1:101219165-101219184 MsG0180006196.01.T01:intron 50.0%
TAATGAGGCCAGGGTTAAGG+AGG - Chr1:101217982-101218001 MsG0180006196.01.T01:CDS 50.0%
TCACCGCACATCCAGTCAAA+CGG + Chr1:101222987-101223006 None:intergenic 50.0%
TGTGGGCCCCACTTAAGAAT+GGG + Chr1:101221162-101221181 None:intergenic 50.0%
TTGTGGGCCCCACTTAAGAA+TGG + Chr1:101221163-101221182 None:intergenic 50.0%
! GGATGTGCGGTGATTTGTGA+TGG - Chr1:101222994-101223013 MsG0180006196.01.T01:intron 50.0%
! GTATTTTCTCCACAGCCTGG+GGG + Chr1:101221903-101221922 None:intergenic 50.0%
! GTTAGCTTGAGAGGTTGAGG+TGG + Chr1:101222583-101222602 None:intergenic 50.0%
! GTTTGAGACCCTCCCATACA+TGG + Chr1:101221054-101221073 None:intergenic 50.0%
!! ACTTCCTTTTCAAGCCGGGT+GGG + Chr1:101222760-101222779 None:intergenic 50.0%
!! ATCAACTCTAAAGCGGGCCT+TGG + Chr1:101222947-101222966 None:intergenic 50.0%
!! CCAACTTGCTGTATAGGGTG+AGG - Chr1:101220358-101220377 MsG0180006196.01.T01:intron 50.0%
!! GAGCCTTGGTTGGTTTCTGA+GGG + Chr1:101219344-101219363 None:intergenic 50.0%
!! GGGGGTACCTAATAGGTATC+GGG + Chr1:101221085-101221104 None:intergenic 50.0%
!! TACTTCCTTTTCAAGCCGGG+TGG + Chr1:101222761-101222780 None:intergenic 50.0%
!! TCAACTCTAAAGCGGGCCTT+GGG + Chr1:101222946-101222965 None:intergenic 50.0%
AAGGAAGCAGAGACAGGGAG+AGG - Chr1:101217736-101217755 MsG0180006196.01.T01:three_prime_UTR 55.0%
ACAGTGCCCTCTCTTAGTGC+TGG - Chr1:101219072-101219091 MsG0180006196.01.T01:intron 55.0%
ACCGAGAAGGAAGCAGAGAC+AGG - Chr1:101217730-101217749 MsG0180006196.01.T01:three_prime_UTR 55.0%
ACCGCCATCATCGATCTGAC+CGG - Chr1:101217694-101217713 MsG0180006196.01.T01:three_prime_UTR 55.0%
AGCAGGACCTGAAGAAGCTG+AGG + Chr1:101219118-101219137 None:intergenic 55.0%
AGCTTGAGAGGTTGAGGTGG+TGG + Chr1:101222580-101222599 None:intergenic 55.0%
AGGAAGCAGAGACAGGGAGA+GGG - Chr1:101217737-101217756 MsG0180006196.01.T01:three_prime_UTR 55.0%
AGGACCTGAAGAAGCTGAGG+TGG + Chr1:101219115-101219134 None:intergenic 55.0%
CAGAGAAGTGGGGCTCACTA+TGG - Chr1:101221714-101221733 MsG0180006196.01.T01:CDS 55.0%
CCCTGTCTCTGCTTCCTTCT+CGG + Chr1:101217734-101217753 None:intergenic 55.0%
CCGAGAAGGAAGCAGAGACA+GGG - Chr1:101217731-101217750 MsG0180006196.01.T01:three_prime_UTR 55.0%
CGAAGAACAGGAGCCTTGGT+TGG + Chr1:101219354-101219373 None:intergenic 55.0%
GACGTGGCACTTCTGCATTC+TGG - Chr1:101222439-101222458 MsG0180006196.01.T01:five_prime_UTR 55.0%
GATGTCACAGCCACACTAGC+AGG + Chr1:101218611-101218630 None:intergenic 55.0%
GCCACTCCAGCACTAAGAGA+GGG + Chr1:101219081-101219100 None:intergenic 55.0%
GCGACAGGAGCTGATTAGAC+AGG - Chr1:101222657-101222676 MsG0180006196.01.T01:intron 55.0%
GGATAGGCTATCAGTTCGGG+AGG - Chr1:101220619-101220638 MsG0180006196.01.T01:intron 55.0%
GGGATGCTTGCTTGAGACCT+TGG + Chr1:101221142-101221161 None:intergenic 55.0%
GGTGGTCATCAGAATCGTGG+CGG + Chr1:101217677-101217696 None:intergenic 55.0%
GTCGAGACACATTCTACGCG+TGG + Chr1:101221550-101221569 None:intergenic 55.0%
GTTCTTCGTCTTGACGCCCA+GGG - Chr1:101219366-101219385 MsG0180006196.01.T01:intron 55.0%
TAGGCTATCAGTTCGGGAGG+TGG - Chr1:101220622-101220641 MsG0180006196.01.T01:intron 55.0%
TCTGGTGTAGCAATCTGGCC+AGG + Chr1:101219312-101219331 None:intergenic 55.0%
TGAAGCTGTCAGACGTGCTC+AGG - Chr1:101219224-101219243 MsG0180006196.01.T01:intron 55.0%
TGCCACTCCAGCACTAAGAG+AGG + Chr1:101219082-101219101 None:intergenic 55.0%
TGCTGAGCTGCGTGAGAAGA+AGG - Chr1:101222846-101222865 MsG0180006196.01.T01:intron 55.0%
TGGAGGTCCTATAGGACCCA+AGG - Chr1:101221122-101221141 MsG0180006196.01.T01:CDS 55.0%
TGGGCGTCAAGACGAAGAAC+AGG + Chr1:101219366-101219385 None:intergenic 55.0%
TGTTCTTCGTCTTGACGCCC+AGG - Chr1:101219365-101219384 MsG0180006196.01.T01:intron 55.0%
TTCTTCTCACGCAGCTCAGC+AGG + Chr1:101222847-101222866 None:intergenic 55.0%
! ACATACACTGGGCTAGGACC+AGG + Chr1:101221754-101221773 None:intergenic 55.0%
! AGATCCCACCCGGCTTGAAA+AGG - Chr1:101222753-101222772 MsG0180006196.01.T01:intron 55.0%
! ATCATGGCGGAATCCCATCC+TGG + Chr1:101219259-101219278 None:intergenic 55.0%
! TCCGGTCAGATCGATGATGG+CGG + Chr1:101217698-101217717 None:intergenic 55.0%
! TGGTGCTCCCTTGTTTCCTG+TGG - Chr1:101223386-101223405 MsG0180006196.01.T01:five_prime_UTR 55.0%
! TTGAGAGGTTGAGGTGGTGG+AGG + Chr1:101222577-101222596 None:intergenic 55.0%
! TTGGTTGCATTGGCGACACC+AGG + Chr1:101219201-101219220 None:intergenic 55.0%
!! CCCCAATGGGGGTACCTAAT+AGG + Chr1:101221092-101221111 None:intergenic 55.0%
!! GGAGCCTTGGTTGGTTTCTG+AGG + Chr1:101219345-101219364 None:intergenic 55.0%
!! TGAGAGGTTGAGGTGGTGGA+GGG + Chr1:101222576-101222595 None:intergenic 55.0%
AATCCTCCAGCCAGTGGCAC+TGG - Chr1:101219171-101219190 MsG0180006196.01.T01:intron 60.0%
ACACTAGCAGGCACCACAGC+AGG + Chr1:101218599-101218618 None:intergenic 60.0%
AGTGGGGCTCACTATGGACC+AGG - Chr1:101221720-101221739 MsG0180006196.01.T01:CDS 60.0%
CAAAGCTCCTGCGGCCTAAG+AGG - Chr1:101219654-101219673 MsG0180006196.01.T01:intron 60.0%
CACCACAGCAGGTGATCCCA+CGG + Chr1:101218588-101218607 None:intergenic 60.0%
CATCAGAATCGTGGCGGCTC+CGG + Chr1:101217671-101217690 None:intergenic 60.0%
CCTGAAGAAGCTGAGGTGGC+AGG + Chr1:101219111-101219130 None:intergenic 60.0%
CCTGCCACCTCAGCTTCTTC+AGG - Chr1:101219108-101219127 MsG0180006196.01.T01:intron 60.0%
GCTCACTATGGACCAGGTGC+TGG - Chr1:101221726-101221745 MsG0180006196.01.T01:CDS 60.0%
GGCGGTGGTCATCAGAATCG+TGG + Chr1:101217680-101217699 None:intergenic 60.0%
GGCTCAGCAGGCGGTTCAAT+AGG + Chr1:101222550-101222569 None:intergenic 60.0%
TAGGACCAGGTACCAGCACC+TGG + Chr1:101221741-101221760 None:intergenic 60.0%
TGCTGTGGTGCCTGCTAGTG+TGG - Chr1:101218598-101218617 MsG0180006196.01.T01:CDS 60.0%
! GCCCTCTCTTAGTGCTGGAG+TGG - Chr1:101219077-101219096 MsG0180006196.01.T01:intron 60.0%
!! ATGGACCAGGTGCTGGTACC+TGG - Chr1:101221733-101221752 MsG0180006196.01.T01:CDS 60.0%
!! CAGGAGCTTGCTGCCAGGAT+GGG - Chr1:101219243-101219262 MsG0180006196.01.T01:intron 60.0%
!! CGAGCGCTGGTTGCTTGCTA+TGG - Chr1:101220825-101220844 MsG0180006196.01.T01:intron 60.0%
!! CTGTTTCAGGGCGTTGCCGT+GGG - Chr1:101218569-101218588 MsG0180006196.01.T01:CDS 60.0%
!! GAGAGGTTGAGGTGGTGGAG+GGG + Chr1:101222575-101222594 None:intergenic 60.0%
!! GGTCAGATCGATGATGGCGG+TGG + Chr1:101217695-101217714 None:intergenic 60.0%
!! TCAGGAGCTTGCTGCCAGGA+TGG - Chr1:101219242-101219261 MsG0180006196.01.T01:intron 60.0%
AATCGTGGCGGCTCCGGTGA+TGG + Chr1:101217665-101217684 None:intergenic 65.0%
ACCGCGACCGTAGCCATCAC+CGG - Chr1:101217649-101217668 MsG0180006196.01.T01:three_prime_UTR 65.0%
AGCGGGCCTTGGGATGAGAG+AGG + Chr1:101222936-101222955 None:intergenic 65.0%
GCAGGCGGTTCAATAGGCCG+AGG + Chr1:101222544-101222563 None:intergenic 65.0%
GCTACGGTCGCGGTCACGTT+CGG + Chr1:101217643-101217662 None:intergenic 65.0%
TGCAGCTGCTGAGCGTGAGC+AGG - Chr1:101222786-101222805 MsG0180006196.01.T01:intron 65.0%
TGCCGTGGGATCACCTGCTG+TGG - Chr1:101218583-101218602 MsG0180006196.01.T01:CDS 65.0%
TTAGGCGGGGATCTTCCCCC+AGG - Chr1:101221885-101221904 MsG0180006196.01.T01:CDS 65.0%
! TCCGGTGATGGCTACGGTCG+CGG + Chr1:101217653-101217672 None:intergenic 65.0%
!! ACCAGGAGCACCAGTGCCAC+TGG + Chr1:101219184-101219203 None:intergenic 65.0%
!! GCTGTTTCAGGGCGTTGCCG+TGG - Chr1:101218568-101218587 MsG0180006196.01.T01:CDS 65.0%
!! GTGCTCAGGAGCTTGCTGCC+AGG - Chr1:101219238-101219257 MsG0180006196.01.T01:intron 65.0%
GGGGATCTTCCCCCAGGCTG+TGG - Chr1:101221891-101221910 MsG0180006196.01.T01:CDS 70.0%
! GCACCAGTGCCACTGGCTGG+AGG + Chr1:101219177-101219196 None:intergenic 70.0%
! GGAGCACCAGTGCCACTGGC+TGG + Chr1:101219180-101219199 None:intergenic 70.0%
! GGCGGCTCCGGTGATGGCTA+CGG + Chr1:101217659-101217678 None:intergenic 70.0%
!! GCCAGTGGCACTGGTGCTCC+TGG - Chr1:101219180-101219199 MsG0180006196.01.T01:intron 70.0%
!! GGTTGAGGTGGTGGAGGGGC+AGG + Chr1:101222571-101222590 None:intergenic 70.0%
GGAGGGGCAGGCTCAGCAGG+CGG + Chr1:101222559-101222578 None:intergenic 75.0%
GGTGGAGGGGCAGGCTCAGC+AGG + Chr1:101222562-101222581 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 101217443 101223682 101217443 ID=MsG0180006196.01;Name=MsG0180006196.01
Chr1 mRNA 101217443 101223682 101217443 ID=MsG0180006196.01.T01;Parent=MsG0180006196.01;Name=MsG0180006196.01.T01;_AED=0.50;_eAED=0.50;_QI=855|1|1|1|1|1|6|362|575
Chr1 exon 101217443 101218687 101217443 ID=MsG0180006196.01.T01:exon:27985;Parent=MsG0180006196.01.T01
Chr1 exon 101221117 101221277 101221117 ID=MsG0180006196.01.T01:exon:27984;Parent=MsG0180006196.01.T01
Chr1 exon 101221386 101221580 101221386 ID=MsG0180006196.01.T01:exon:27983;Parent=MsG0180006196.01.T01
Chr1 exon 101221670 101222116 101221670 ID=MsG0180006196.01.T01:exon:27982;Parent=MsG0180006196.01.T01
Chr1 exon 101222260 101222547 101222260 ID=MsG0180006196.01.T01:exon:27981;Parent=MsG0180006196.01.T01
Chr1 exon 101223074 101223682 101223074 ID=MsG0180006196.01.T01:exon:27980;Parent=MsG0180006196.01.T01
Chr1 five_prime_UTR 101223074 101223682 101223074 ID=MsG0180006196.01.T01:five_prime_utr;Parent=MsG0180006196.01.T01
Chr1 five_prime_UTR 101222302 101222547 101222302 ID=MsG0180006196.01.T01:five_prime_utr;Parent=MsG0180006196.01.T01
Chr1 CDS 101222260 101222301 101222260 ID=MsG0180006196.01.T01:cds;Parent=MsG0180006196.01.T01
Chr1 CDS 101221670 101222116 101221670 ID=MsG0180006196.01.T01:cds;Parent=MsG0180006196.01.T01
Chr1 CDS 101221386 101221580 101221386 ID=MsG0180006196.01.T01:cds;Parent=MsG0180006196.01.T01
Chr1 CDS 101221117 101221277 101221117 ID=MsG0180006196.01.T01:cds;Parent=MsG0180006196.01.T01
Chr1 CDS 101217805 101218687 101217805 ID=MsG0180006196.01.T01:cds;Parent=MsG0180006196.01.T01
Chr1 three_prime_UTR 101217443 101217804 101217443 ID=MsG0180006196.01.T01:three_prime_utr;Parent=MsG0180006196.01.T01
Gene Sequence

>MsG0180006196.01.T01

ATGCAGAAATTGTTGTCAGCGAAGCTGAAGAAAATTCCTCAGTTAAATAAGAGTTCTACCTCAAATTCAGAAGAAAGTACACAGTTTGGTAACAAGACTGAATCTACAGTGCCCTCTCTTAGTGCTGGAGTGGCATCAAGACCTGCCACCTCAGCTTCTTCAGGTCCTGCTGCAAATATGTCAATTTTTCCTGCTGCTGTTGTAAATCCTCCAGCCAGTGGCACTGGTGCTCCTGGTGTCGCCAATGCAACCAACTTTGAAGCTGTCAGACGTGCTCAGGAGCTTGCTGCCAGGATGGGATTCCGCCATGATCCACAATTTGCTCCTCTAATAAATATGTTTCCTGGCCAGATTGCTACACCAGACGTTACTATCCCTCAGAAACCAACCAAGGCTCCTGTTCTTCGTCTTGACGCCCAGGGACGTGAAATAGATGAACATGGAAATGTTGTTAATGTAACTAAGCCAAGTAACCTTAGCACATTAAAGGTCAACATTAATAAACAGAAGAAAGATGCATTTGAAATACTAAAACCTGTATTGGATGTCGATCCTGAATCTAATCCTCATTTTGATGAGAGAATGGGTATCGACAAAACAAAGCTCCTGCGGCCTAAGAGGATGAATTTTCTGTTTGTGGAGGAAGGAAAATGGTCAAGAGATGCTGAATCAATAAAATTGAAGAGTAAATTTGGAGAAGCTCAAGCAAAAGAGCAGAAGGCCAAACAAGCACAGCTAGCAAAGGCAAAGGCTGCTCCTGATATCAATCCGAACTTAATAGAAATTACAGAGAGAGTTGTAATGAAAGCAAAACTGAAGGACCCAATTCCAGATATTGAGTGGTGGGACGTGGCACTTCTGCATTCTGGAAATTATGGTGACATTACCAACGGTACTATAGATGAAGGCAATCTTAAAATGGAAAAATTCAACTTTTATGTGGAACATCCTCGGCCTATTGAACCGCCTGCTGAGCCTGCCCCTCCACCACCTCAACCTCTCAAGCTAACTAAAAAGGAGCATAAGAAACTAAGGACCCAAAAGCGTATAGCTAAGGAGAAAGAGCGACAGGAGCTGATTAGACAGGGTCTCATAGAACCGCCAAAACCAAAGGTCAAGATGAGTAATTTACATAAGGTACTAGGGACTGAAGCAACTCAAGATCCCACCCGGCTTGAAAAGGAAGTACGTAATGCAGCTGCTGAGCGTGAGCAGGCTCACATAGATAGGAATATTGCACGCAAGCTTACTCCTGCTGAGCTGCGTGAGAAGAAGGAAAGGAAGCTTTTCGATGACCCAAATACATTGGACACACTTGTCTCACTTTACAGGGTAAATGACCTCTCTCATCCCAAGGCCCGCTTTAGAGTTGATGTTAATGCTCAAGAAAACCGTTTGACTGGATGTGCGGTGATTTGTGATGGTATTAGCGTTGTTGTGGTTGAAGGTGGAAGCAAGTCAATTAAGAGGTATGGGAAACTTATGCTTAGGCGTATCAATTGGACGGATGTTTCAAAAGAGAAAGAAGATGATGAAGATTCAGACGATGACAAGCCGGCCAATAAATGTGTTCTGGTGTGGCAAGGAAGTGTTGCCAAATCGAGCTTCAATAGGTTCAGTGTTCATGACTGCATCACTGAAGCAGCTGCTCGTAAAGTTTTTGTGGATGCTGGGGTTCCTCATTATTGGGACCAAGCTGTCAACTATACTGAGGACGATGCTGTTTGA
Protein sequence

>MsG0180006196.01.T01

MQKLLSAKLKKIPQLNKSSTSNSEESTQFGNKTESTVPSLSAGVASRPATSASSGPAANMSIFPAAVVNPPASGTGAPGVANATNFEAVRRAQELAARMGFRHDPQFAPLINMFPGQIATPDVTIPQKPTKAPVLRLDAQGREIDEHGNVVNVTKPSNLSTLKVNINKQKKDAFEILKPVLDVDPESNPHFDERMGIDKTKLLRPKRMNFLFVEEGKWSRDAESIKLKSKFGEAQAKEQKAKQAQLAKAKAAPDINPNLIEITERVVMKAKLKDPIPDIEWWDVALLHSGNYGDITNGTIDEGNLKMEKFNFYVEHPRPIEPPAEPAPPPPQPLKLTKKEHKKLRTQKRIAKEKERQELIRQGLIEPPKPKVKMSNLHKVLGTEATQDPTRLEKEVRNAAAEREQAHIDRNIARKLTPAELREKKERKLFDDPNTLDTLVSLYRVNDLSHPKARFRVDVNAQENRLTGCAVICDGISVVVVEGGSKSIKRYGKLMLRRINWTDVSKEKEDDEDSDDDKPANKCVLVWQGSVAKSSFNRFSVHDCITEAAARKVFVDAGVPHYWDQAVNYTEDDAV*