AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001372.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001372.01.T01 MTR_1g036290 89.189 111 12 0 59 169 1 111 6.06e-58 177
MsG0180001372.01.T01 MTR_5g054550 42.775 173 46 7 3 169 39 164 9.86e-33 114
MsG0180001372.01.T01 MTR_4g074240 44.444 162 71 4 13 167 91 240 6.79e-32 114
MsG0180001372.01.T01 MTR_4g074240 41.379 174 64 5 13 167 91 245 7.77e-31 112
MsG0180001372.01.T01 MTR_1g036380 68.000 50 16 0 118 167 1 50 5.61e-18 73.9
MsG0180001372.01.T01 MTR_1g036370 51.562 64 29 1 103 164 1 64 5.46e-17 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001372.01.T01 AT5G48655 42.308 156 84 2 13 167 51 201 4.58e-30 108
MsG0180001372.01.T01 AT5G48655 42.308 156 84 2 13 167 51 201 4.58e-30 108
MsG0180001372.01.T01 AT5G48655 42.308 156 84 2 13 167 51 201 4.58e-30 108
MsG0180001372.01.T01 AT5G48655 42.308 156 84 2 13 167 51 201 4.58e-30 108
MsG0180001372.01.T01 AT5G48655 42.308 156 84 2 13 167 51 201 4.58e-30 108
MsG0180001372.01.T01 AT5G48655 42.308 156 84 2 13 167 51 201 4.58e-30 108
MsG0180001372.01.T01 AT3G07200 37.870 169 69 6 6 167 41 180 1.02e-29 107
MsG0180001372.01.T01 AT3G07200 37.870 169 69 6 6 167 41 180 1.02e-29 107
MsG0180001372.01.T01 AT3G07200 37.870 169 69 6 6 167 41 180 1.02e-29 107

Find 45 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGATGTTTATATAAATT+TGG 0.159515 1:+20068338 MsG0180001372.01.T01:CDS
GGTGGGAACTGGCTCGAATT+TGG 0.195072 1:+20064923 MsG0180001372.01.T01:CDS
TGCTTCAATATTAGGCTCTA+AGG 0.284376 1:-20069352 None:intergenic
ACAAAAGGATCCATACATAT+TGG 0.300057 1:-20069402 None:intergenic
GGATCAGATGCTTCAATATT+AGG 0.316549 1:-20069360 None:intergenic
TTCTTCCATCTTTCGGTTGA+AGG 0.339796 1:+20069550 MsG0180001372.01.T01:CDS
GTGGGAACTGGCTCGAATTT+GGG 0.347452 1:+20064924 MsG0180001372.01.T01:CDS
ATGCCCTACTTGTAGGAAAA+AGG 0.359251 1:+20069500 MsG0180001372.01.T01:CDS
ATAAATTTGGAAGTCAATAC+TGG 0.362865 1:+20068351 MsG0180001372.01.T01:CDS
AAGGAAAATGCCCTACTTGT+AGG 0.367911 1:+20069493 MsG0180001372.01.T01:CDS
TTTATATAAACATCAGCAAT+TGG 0.399323 1:-20068333 None:intergenic
CAAAAGGATCCATACATATT+GGG 0.400620 1:-20069401 None:intergenic
AAGGTGTTTCTTCCATCTTT+CGG 0.411343 1:+20069543 MsG0180001372.01.T01:CDS
GTTGTCATTTCTTCCACAAA+AGG 0.416428 1:-20069417 None:intergenic
ACCTAGATGCCCAATATGTA+TGG 0.428421 1:+20069392 MsG0180001372.01.T01:CDS
CACTTCAAGACAGCTAATAA+AGG 0.433227 1:+20069524 MsG0180001372.01.T01:CDS
ATTGGGCATCTAGGTTCCTC+TGG 0.457077 1:-20069384 None:intergenic
TCCATACATATTGGGCATCT+AGG 0.460696 1:-20069393 None:intergenic
TAAACCTGAGCAAAAGATCT+AGG 0.472023 1:-20064709 None:intergenic
ACTATCCTCAAGGTCAATGA+AGG 0.479527 1:-20064662 None:intergenic
AATCGAAGAAGGGTGGGAAC+TGG 0.505583 1:+20064912 MsG0180001372.01.T01:CDS
TGTTCCCTTCATTGACCTTG+AGG 0.516140 1:+20064657 MsG0180001372.01.T01:CDS
TCATACCTTCAACCGAAAGA+TGG 0.537868 1:-20069555 None:intergenic
CTTGTGCGCATAGCATAAGT+TGG 0.546475 1:-20068291 None:intergenic
GCGCAAGGAGAAATCGAAGA+AGG 0.552287 1:+20064901 MsG0180001372.01.T01:CDS
AAATTCAGCTGAAACTAAGA+AGG 0.561560 1:+20069326 MsG0180001372.01.T01:CDS
ATTTGGAAGTCAATACTGGT+GGG 0.570367 1:+20068355 MsG0180001372.01.T01:CDS
GGGAACATGACGAGGTTCTG+AGG 0.577708 1:-20064641 None:intergenic
CATCATCATCACTATCCTCA+AGG 0.582667 1:-20064672 None:intergenic
TGAGACTTCAAGATGAGTGA+GGG 0.585545 1:+20064616 None:intergenic
CGCAAGGAGAAATCGAAGAA+GGG 0.592150 1:+20064902 MsG0180001372.01.T01:CDS
AATTTGGAAGTCAATACTGG+TGG 0.601408 1:+20068354 MsG0180001372.01.T01:CDS
AGGAGAAATCGAAGAAGGGT+GGG 0.611645 1:+20064906 MsG0180001372.01.T01:CDS
TTTGGAAGTCAATACTGGTG+GGG 0.613668 1:+20068356 MsG0180001372.01.T01:CDS
CGTCATCTTAGGCAAGCGCA+AGG 0.617837 1:+20064886 MsG0180001372.01.T01:intron
AAGGAGAAATCGAAGAAGGG+TGG 0.627151 1:+20064905 MsG0180001372.01.T01:CDS
TTGAGACTTCAAGATGAGTG+AGG 0.627205 1:+20064615 None:intergenic
GGGCATCTAGGTTCCTCTGG+AGG 0.628249 1:-20069381 None:intergenic
CTATCCTCAAGGTCAATGAA+GGG 0.628639 1:-20064661 None:intergenic
GGAAGTCAATACTGGTGGGG+AGG 0.647548 1:+20068359 MsG0180001372.01.T01:CDS
GAGACTTCAAGATGAGTGAG+GGG 0.656896 1:+20064617 None:intergenic
TCAATGAAGGGAACATGACG+AGG 0.663792 1:-20064649 None:intergenic
GAAGAAATGACAACAAGGTG+TGG 0.665519 1:+20069426 MsG0180001372.01.T01:CDS
TTGTGGAAGAAATGACAACA+AGG 0.676618 1:+20069421 MsG0180001372.01.T01:CDS
TGAAGCATCTGATCCTCCAG+AGG 0.686404 1:+20069368 MsG0180001372.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTATTTATATTTT+TGG + Chr1:20065647-20065666 MsG0180001372.01.T01:intron 0.0%
!!! ATTTTATTTTTTTTATAATT+TGG + Chr1:20067402-20067421 MsG0180001372.01.T01:intron 0.0%
!!! TTTTATTTTTTTTATAATTT+GGG + Chr1:20067403-20067422 MsG0180001372.01.T01:intron 0.0%
!! AAAAATAAATTCATAATTTG+GGG + Chr1:20068663-20068682 MsG0180001372.01.T01:intron 10.0%
!! CAAAAAATAAATTCATAATT+TGG + Chr1:20068661-20068680 MsG0180001372.01.T01:intron 10.0%
!!! AATATTTTCAAAAACATAAT+TGG - Chr1:20065173-20065192 None:intergenic 10.0%
!!! AATTATGAATTTATTTTTTG+GGG - Chr1:20068661-20068680 None:intergenic 10.0%
!!! AGACTTTTTTATTATAATTT+AGG - Chr1:20067122-20067141 None:intergenic 10.0%
!!! ATATTTTCAAAAACATAATT+GGG - Chr1:20065172-20065191 None:intergenic 10.0%
!!! CAAATTATGAATTTATTTTT+TGG - Chr1:20068663-20068682 None:intergenic 10.0%
!!! TATACATTTTAATTGAAAAA+AGG + Chr1:20068750-20068769 MsG0180001372.01.T01:intron 10.0%
!!! TCAAAACTTTTATTAATATA+TGG + Chr1:20068157-20068176 MsG0180001372.01.T01:intron 10.0%
!!! TTTTTCAATTAAAATGTATA+TGG - Chr1:20068750-20068769 None:intergenic 10.0%
!!! TTTTTTATTATAATTTAGGA+CGG - Chr1:20067118-20067137 None:intergenic 10.0%
!! AAAAATGTAATAAGAATACA+AGG + Chr1:20069474-20069493 MsG0180001372.01.T01:CDS 15.0%
!! AATATTATATCAATCAGAAT+TGG + Chr1:20065424-20065443 MsG0180001372.01.T01:intron 15.0%
!! ATATATATATATTCATTCCA+TGG - Chr1:20067754-20067773 None:intergenic 15.0%
!! ATTATTATTATGTCTAAAAG+AGG - Chr1:20067619-20067638 None:intergenic 15.0%
!! GTTCTATTTATAAAAAAGAA+CGG + Chr1:20065287-20065306 MsG0180001372.01.T01:intron 15.0%
!! TAATTAAATCTGATAAAAGT+TGG - Chr1:20067179-20067198 None:intergenic 15.0%
!! TAGTTATTGAGAAAATATAA+GGG - Chr1:20067266-20067285 None:intergenic 15.0%
!! TATATATATATTCATTCCAT+GGG - Chr1:20067753-20067772 None:intergenic 15.0%
!! TTAATGATTTAAATGAACAA+AGG - Chr1:20064759-20064778 None:intergenic 15.0%
!! TTAGTTATTGAGAAAATATA+AGG - Chr1:20067267-20067286 None:intergenic 15.0%
!!! AGAAAATTTGATAATATTCT+TGG - Chr1:20067531-20067550 None:intergenic 15.0%
!!! AGAATATTATCAAATTTTCT+TGG + Chr1:20067531-20067550 MsG0180001372.01.T01:intron 15.0%
!!! ATTTGCATTTATTTTATCAT+TGG - Chr1:20067226-20067245 None:intergenic 15.0%
!!! ATTTTGATTTCTTTTTATTG+AGG - Chr1:20066393-20066412 None:intergenic 15.0%
!!! ATTTTTTTTATAATTTGGGA+TGG + Chr1:20067407-20067426 MsG0180001372.01.T01:intron 15.0%
!!! CTTTTTAACAAAATTAATAG+TGG - Chr1:20065535-20065554 None:intergenic 15.0%
!!! GATAATTGTTATTTATATTG+TGG + Chr1:20065554-20065573 MsG0180001372.01.T01:intron 15.0%
!!! TATTATCATTTTGTTGTTTT+CGG + Chr1:20065091-20065110 MsG0180001372.01.T01:intron 15.0%
!!! TGGTAGATATTATTTTATTA+TGG + Chr1:20068950-20068969 MsG0180001372.01.T01:intron 15.0%
!!! TTCTTTTTTATAAATAGAAC+CGG - Chr1:20065287-20065306 None:intergenic 15.0%
!!! TTTTTAATACAACATATCAA+TGG + Chr1:20068119-20068138 MsG0180001372.01.T01:intron 15.0%
!! AAACCTGAATATAAGAAATA+TGG - Chr1:20067700-20067719 None:intergenic 20.0%
!! AAATGACAATAGTATTAAAG+AGG - Chr1:20068226-20068245 None:intergenic 20.0%
!! ACATAAATAAACAAATGGAT+AGG + Chr1:20067476-20067495 MsG0180001372.01.T01:intron 20.0%
!! ACATAACTACAATTTATGAA+CGG - Chr1:20067946-20067965 None:intergenic 20.0%
!! ACTAATTATAAAGTAGGTTT+AGG - Chr1:20066063-20066082 None:intergenic 20.0%
!! AGGATATTATGAAAGAATAT+TGG - Chr1:20067599-20067618 None:intergenic 20.0%
!! AGTTATTGAGAAAATATAAG+GGG - Chr1:20067265-20067284 None:intergenic 20.0%
!! ATACCATATTTCTTATATTC+AGG + Chr1:20067694-20067713 MsG0180001372.01.T01:intron 20.0%
!! CATAAATAAACAAATGGATA+GGG + Chr1:20067477-20067496 MsG0180001372.01.T01:intron 20.0%
!! CGAAATACAAAATTAAACAA+AGG - Chr1:20064868-20064887 None:intergenic 20.0%
!! TGCTGATGTTTATATAAATT+TGG + Chr1:20068338-20068357 MsG0180001372.01.T01:CDS 20.0%
!! TGTTGACATAAATAAACAAA+TGG + Chr1:20067471-20067490 MsG0180001372.01.T01:intron 20.0%
!! TTAAATGAACAAAGGTTTAA+TGG - Chr1:20064751-20064770 None:intergenic 20.0%
!! TTTATATAAACATCAGCAAT+TGG - Chr1:20068336-20068355 None:intergenic 20.0%
!!! AAATTTGATAATATTCTTGG+TGG - Chr1:20067528-20067547 None:intergenic 20.0%
!!! AACCCCTAATTTTATATTTT+TGG - Chr1:20068689-20068708 None:intergenic 20.0%
!!! AACTTGAATATTTCTTTTAC+AGG + Chr1:20069290-20069309 MsG0180001372.01.T01:intron 20.0%
!!! ACAAATATTTGTTTTAGGTT+CGG - Chr1:20066301-20066320 None:intergenic 20.0%
!!! ATGATAGTTTTTATTACGTT+AGG - Chr1:20068804-20068823 None:intergenic 20.0%
!!! CTTAAAACCTTCTATTTTTT+TGG - Chr1:20069063-20069082 None:intergenic 20.0%
!!! GAAAATTATTTTCACACATT+AGG + Chr1:20068830-20068849 MsG0180001372.01.T01:intron 20.0%
!!! GGAATACAAATATTTGTTTT+AGG - Chr1:20066306-20066325 None:intergenic 20.0%
!!! TTTTTTTATACATCAATGAC+TGG - Chr1:20069212-20069231 None:intergenic 20.0%
! AAAATATAACCACACAAAAC+CGG + Chr1:20067983-20068002 MsG0180001372.01.T01:intron 25.0%
! AAAGAAGCCAAAAAAATAGA+AGG + Chr1:20069053-20069072 MsG0180001372.01.T01:intron 25.0%
! AAATTAGACGTCATATAGTT+CGG - Chr1:20065632-20065651 None:intergenic 25.0%
! AATGTTATATCTGTGACATA+TGG + Chr1:20065126-20065145 MsG0180001372.01.T01:intron 25.0%
! ACCTACTTTATAATTAGTCA+TGG + Chr1:20066065-20066084 MsG0180001372.01.T01:intron 25.0%
! AGTATATTCACATTTATGCA+TGG + Chr1:20067434-20067453 MsG0180001372.01.T01:intron 25.0%
! ATAAATTTGGAAGTCAATAC+TGG + Chr1:20068351-20068370 MsG0180001372.01.T01:CDS 25.0%
! ATACTATAGGAAATGCTAAT+CGG - Chr1:20069183-20069202 None:intergenic 25.0%
! ATTAGTTAGATCCAAATTGT+AGG + Chr1:20068881-20068900 MsG0180001372.01.T01:intron 25.0%
! GGCCAAAAATATAAAATTAG+GGG + Chr1:20068684-20068703 MsG0180001372.01.T01:intron 25.0%
! GGGCCAAAAATATAAAATTA+GGG + Chr1:20068683-20068702 MsG0180001372.01.T01:intron 25.0%
! GGTTTAATGGAGAAAAAAAA+TGG - Chr1:20064738-20064757 None:intergenic 25.0%
! GTTAAGTGTTTCTTAAAAAC+AGG + Chr1:20065392-20065411 MsG0180001372.01.T01:intron 25.0%
! GTTATTGAGAAAATATAAGG+GGG - Chr1:20067264-20067283 None:intergenic 25.0%
! TAACATACTTCATGAGTAAA+TGG + Chr1:20068076-20068095 MsG0180001372.01.T01:intron 25.0%
! TCCATGACTAATTATAAAGT+AGG - Chr1:20066069-20066088 None:intergenic 25.0%
! TGACTGGAAAAATATACTAT+AGG - Chr1:20069196-20069215 None:intergenic 25.0%
! TTTCTATGAAACTTATTCCA+AGG + Chr1:20067313-20067332 MsG0180001372.01.T01:intron 25.0%
!! AATAGTCAATTATTGGTTGT+TGG + Chr1:20066926-20066945 MsG0180001372.01.T01:intron 25.0%
!! AGTTATATGCATGTTTCTAA+AGG - Chr1:20067846-20067865 None:intergenic 25.0%
!! ATTTTGTATTTCGTCATCTT+AGG + Chr1:20064875-20064894 MsG0180001372.01.T01:intron 25.0%
!! TTATTATAATTTAGGACGGA+GGG - Chr1:20067114-20067133 None:intergenic 25.0%
!! TTCCTAAGTGAAACTATTTT+TGG - Chr1:20065744-20065763 None:intergenic 25.0%
!! TTTATTATAATTTAGGACGG+AGG - Chr1:20067115-20067134 None:intergenic 25.0%
!!! ATAAAGTAGGTTTAGGATTT+TGG - Chr1:20066056-20066075 None:intergenic 25.0%
!!! GTCTTTTTTGCTTAAAATCT+AGG - Chr1:20067157-20067176 None:intergenic 25.0%
!!! TTTTTATAATTTGGGATGGA+GGG + Chr1:20067411-20067430 MsG0180001372.01.T01:intron 25.0%
!!! TTTTTTATAAATAGAACCGG+AGG - Chr1:20065284-20065303 None:intergenic 25.0%
!!! TTTTTTATAATTTGGGATGG+AGG + Chr1:20067410-20067429 MsG0180001372.01.T01:intron 25.0%
AAATTCAGCTGAAACTAAGA+AGG + Chr1:20069326-20069345 MsG0180001372.01.T01:CDS 30.0%
AACGATATAGATCTGGTTAA+TGG + Chr1:20066701-20066720 MsG0180001372.01.T01:intron 30.0%
AATATTTCTTGGGGTCTATT+TGG - Chr1:20067728-20067747 None:intergenic 30.0%
AATGGATAGGGAATTTCATA+TGG + Chr1:20067489-20067508 MsG0180001372.01.T01:intron 30.0%
AATGTGGTACATAGTGATAA+TGG + Chr1:20067029-20067048 MsG0180001372.01.T01:intron 30.0%
ACAAAAGGATCCATACATAT+TGG - Chr1:20069405-20069424 None:intergenic 30.0%
ACGATATAGATCTGGTTAAT+GGG + Chr1:20066702-20066721 MsG0180001372.01.T01:intron 30.0%
AGACAATACTCTAAACACAT+CGG + Chr1:20067894-20067913 MsG0180001372.01.T01:intron 30.0%
AGTGTTTCTTAAAAACAGGA+CGG + Chr1:20065396-20065415 MsG0180001372.01.T01:intron 30.0%
ATAGTTTCTTGTGTTATCCT+TGG - Chr1:20067333-20067352 None:intergenic 30.0%
ATCTAGGAACAAAAAGTTGT+CGG - Chr1:20067647-20067666 None:intergenic 30.0%
ATTAGTCATGGATATTGAGT+CGG + Chr1:20066077-20066096 MsG0180001372.01.T01:intron 30.0%
CAAAAGGATCCATACATATT+GGG - Chr1:20069404-20069423 None:intergenic 30.0%
CAATAAATGCACGAGTTATA+AGG - Chr1:20068431-20068450 None:intergenic 30.0%
CAATATTAGTCGTAATAGCA+GGG + Chr1:20068596-20068615 MsG0180001372.01.T01:intron 30.0%
CCAATTGTAAATACTTTGTC+AGG + Chr1:20068026-20068045 MsG0180001372.01.T01:intron 30.0%
GACAGTCAATAGTCAATTAT+TGG + Chr1:20066919-20066938 MsG0180001372.01.T01:intron 30.0%
GACCAAAAATAGTTTCACTT+AGG + Chr1:20065739-20065758 MsG0180001372.01.T01:intron 30.0%
GGGGCCAAAAATATAAAATT+AGG + Chr1:20068682-20068701 MsG0180001372.01.T01:intron 30.0%
GTATACTAAATGTGTAAGCT+TGG - Chr1:20067678-20067697 None:intergenic 30.0%
GTGAAACTACTTGTGAATTT+CGG + Chr1:20066878-20066897 MsG0180001372.01.T01:intron 30.0%
TATATTACCGTACAGAGATA+AGG - Chr1:20065503-20065522 None:intergenic 30.0%
TATCAATCAGAATTGGTATC+TGG + Chr1:20065431-20065450 MsG0180001372.01.T01:intron 30.0%
TATCCGTATTTCTTTCTTCA+CGG - Chr1:20066665-20066684 None:intergenic 30.0%
TGAAACTACTTGTGAATTTC+GGG + Chr1:20066879-20066898 MsG0180001372.01.T01:intron 30.0%
TTCACTTAACTTTCTCTAGA+GGG - Chr1:20066609-20066628 None:intergenic 30.0%
TTGGTCATTATACCTTTACT+TGG - Chr1:20066037-20066056 None:intergenic 30.0%
TTTCACTTAACTTTCTCTAG+AGG - Chr1:20066610-20066629 None:intergenic 30.0%
! AATATGTATGGATCCTTTTG+TGG + Chr1:20069404-20069423 MsG0180001372.01.T01:CDS 30.0%
! AATGCAAATTGCACTCATTT+TGG + Chr1:20067237-20067256 MsG0180001372.01.T01:intron 30.0%
! ATTTTATGGCAGTGGTTTAT+TGG + Chr1:20069254-20069273 MsG0180001372.01.T01:intron 30.0%
! CAAATTTTCTTGGCTCAATT+TGG + Chr1:20067541-20067560 MsG0180001372.01.T01:intron 30.0%
! CCTGACAAAGTATTTACAAT+TGG - Chr1:20068029-20068048 None:intergenic 30.0%
! CTTAGTTTCAGCTGAATTTT+TGG - Chr1:20069325-20069344 None:intergenic 30.0%
! CTTTTGTTCATGATTATTGC+AGG + Chr1:20068255-20068274 MsG0180001372.01.T01:intron 30.0%
! GACAAAGTATTTACAATTGG+AGG - Chr1:20068026-20068045 None:intergenic 30.0%
! TTTTCTCAATTACTCGTCTT+TGG + Chr1:20065776-20065795 MsG0180001372.01.T01:intron 30.0%
!! AGAAAAAGTATTGTAACCTC+CGG + Chr1:20065265-20065284 MsG0180001372.01.T01:intron 30.0%
!!! ATTTTTTTGGCTTCTTTAGC+CGG - Chr1:20069050-20069069 None:intergenic 30.0%
!!! GAATTTATTTTTTGGGGTCT+AGG - Chr1:20068655-20068674 None:intergenic 30.0%
AAAAAGTAGTGACATCGCAT+AGG - Chr1:20065580-20065599 None:intergenic 35.0%
AAAGTTGACATTGATCATCC+TGG - Chr1:20066270-20066289 None:intergenic 35.0%
AAGAACAGCTTTCCAAGTAA+AGG + Chr1:20066022-20066041 MsG0180001372.01.T01:intron 35.0%
AAGATATGTTGAAACCTTGC+AGG - Chr1:20066838-20066857 None:intergenic 35.0%
AATATCTACCACTATTACGC+AGG - Chr1:20068941-20068960 None:intergenic 35.0%
AATGCATGTTCATCTGGTTA+AGG - Chr1:20069237-20069256 None:intergenic 35.0%
AATGGGGGTAATATGTTGAA+TGG - Chr1:20065815-20065834 None:intergenic 35.0%
AATTTGGAAGTCAATACTGG+TGG + Chr1:20068354-20068373 MsG0180001372.01.T01:CDS 35.0%
AGGAATAGTTGTACTCCTTA+GGG - Chr1:20066001-20066020 None:intergenic 35.0%
ATATCCTCCGTACATAAGAA+TGG + Chr1:20066459-20066478 MsG0180001372.01.T01:intron 35.0%
ATATCTACCACTATTACGCA+GGG - Chr1:20068940-20068959 None:intergenic 35.0%
ATATTACCCCCATTATGGTA+TGG + Chr1:20065821-20065840 MsG0180001372.01.T01:intron 35.0%
ATGGTACAGTTGTATATCGA+TGG - Chr1:20066956-20066975 None:intergenic 35.0%
ATTCACATGGAACATATGTG+GGG - Chr1:20065859-20065878 None:intergenic 35.0%
ATTCTTATGTACGGAGGATA+TGG - Chr1:20066460-20066479 None:intergenic 35.0%
ATTTGGAAGTCAATACTGGT+GGG + Chr1:20068355-20068374 MsG0180001372.01.T01:CDS 35.0%
CAACAATCAAAATACGACAG+AGG - Chr1:20068487-20068506 None:intergenic 35.0%
CACTTCAAGACAGCTAATAA+AGG + Chr1:20069524-20069543 MsG0180001372.01.T01:CDS 35.0%
CCATAAAATGCATGTTCATC+TGG - Chr1:20069243-20069262 None:intergenic 35.0%
CTGGTGTAAATTATGTTGCA+TGG - Chr1:20066756-20066775 None:intergenic 35.0%
GACAATACTCTAAACACATC+GGG + Chr1:20067895-20067914 MsG0180001372.01.T01:intron 35.0%
GATAGACCCATTCTTATGTA+CGG - Chr1:20066469-20066488 None:intergenic 35.0%
GATTCACATGGAACATATGT+GGG - Chr1:20065860-20065879 None:intergenic 35.0%
GCAATATTAGTCGTAATAGC+AGG + Chr1:20068595-20068614 MsG0180001372.01.T01:intron 35.0%
GGATCAGATGCTTCAATATT+AGG - Chr1:20069363-20069382 None:intergenic 35.0%
GGTCAAACTCCAAAATATCA+AGG - Chr1:20065701-20065720 None:intergenic 35.0%
GTGGAATGATAGGTATATGT+GGG - Chr1:20066118-20066137 None:intergenic 35.0%
GTGTTTCTTAAAAACAGGAC+GGG + Chr1:20065397-20065416 MsG0180001372.01.T01:intron 35.0%
TAAACCTGAGCAAAAGATCT+AGG - Chr1:20064712-20064731 None:intergenic 35.0%
TACTAAATGTGTAAGCTTGG+TGG - Chr1:20067675-20067694 None:intergenic 35.0%
TATCCTCCGTACATAAGAAT+GGG + Chr1:20066460-20066479 MsG0180001372.01.T01:intron 35.0%
TATTACCCCCATTATGGTAT+GGG + Chr1:20065822-20065841 MsG0180001372.01.T01:intron 35.0%
TCAACATATTACCCCCATTA+TGG + Chr1:20065816-20065835 MsG0180001372.01.T01:intron 35.0%
TCATTCAACATCATCACTGA+AGG + Chr1:20066235-20066254 MsG0180001372.01.T01:intron 35.0%
TCCATGGGACAATATTTCTT+GGG - Chr1:20067738-20067757 None:intergenic 35.0%
TCTTCTTCTTCAGGATAAGT+GGG - Chr1:20066184-20066203 None:intergenic 35.0%
TGAGGTTACCAAAGATTTGA+AGG + Chr1:20066569-20066588 MsG0180001372.01.T01:intron 35.0%
TGCTTCAATATTAGGCTCTA+AGG - Chr1:20069355-20069374 None:intergenic 35.0%
TGGTACAGTTGTATATCGAT+GGG - Chr1:20066955-20066974 None:intergenic 35.0%
TTAACCTCCAAACACTTTGA+TGG - Chr1:20066158-20066177 None:intergenic 35.0%
TTAGTCATGGATATTGAGTC+GGG + Chr1:20066078-20066097 MsG0180001372.01.T01:intron 35.0%
TTCCATGGGACAATATTTCT+TGG - Chr1:20067739-20067758 None:intergenic 35.0%
TTGTGGAAGAAATGACAACA+AGG + Chr1:20069421-20069440 MsG0180001372.01.T01:CDS 35.0%
TTGTTCACCTTATCTCTGTA+CGG + Chr1:20065493-20065512 MsG0180001372.01.T01:intron 35.0%
! AAGGTGTTTCTTCCATCTTT+CGG + Chr1:20069543-20069562 MsG0180001372.01.T01:CDS 35.0%
! AGTCGATTCATGTCAAAATG+TGG + Chr1:20067013-20067032 MsG0180001372.01.T01:intron 35.0%
! CAATTTATGAACGGCTTTGT+TGG - Chr1:20067937-20067956 None:intergenic 35.0%
! CCAGATGAACATGCATTTTA+TGG + Chr1:20069240-20069259 MsG0180001372.01.T01:intron 35.0%
! GTCAGATGTTATTTACTTCC+TGG - Chr1:20065722-20065741 None:intergenic 35.0%
! GTTGTCATTTCTTCCACAAA+AGG - Chr1:20069420-20069439 None:intergenic 35.0%
! TACTTGACCATCAAAGTGTT+TGG + Chr1:20066148-20066167 MsG0180001372.01.T01:intron 35.0%
! TGACCTTTTTCCTACAAGTA+GGG - Chr1:20069506-20069525 None:intergenic 35.0%
!!! TGATATTTTGGAGTTTGACC+AGG + Chr1:20065701-20065720 MsG0180001372.01.T01:intron 35.0%
!!! TTATTTTTTGGGGTCTAGGA+CGG - Chr1:20068651-20068670 None:intergenic 35.0%
AACATTGGCCCATACCATAA+TGG - Chr1:20065833-20065852 None:intergenic 40.0%
AACTACTTGTGAATTTCGGG+AGG + Chr1:20066882-20066901 MsG0180001372.01.T01:intron 40.0%
AAGAAGAAGACTACTGCTGA+TGG + Chr1:20066194-20066213 MsG0180001372.01.T01:intron 40.0%
AAGGAAAATGCCCTACTTGT+AGG + Chr1:20069493-20069512 MsG0180001372.01.T01:CDS 40.0%
ACAAAAACGTGTGTGAACCA+TGG - Chr1:20066346-20066365 None:intergenic 40.0%
ACATATGTGGGGTTGAACAT+TGG - Chr1:20065848-20065867 None:intergenic 40.0%
ACATTGGCCCATACCATAAT+GGG - Chr1:20065832-20065851 None:intergenic 40.0%
ACCTAGATGCCCAATATGTA+TGG + Chr1:20069392-20069411 MsG0180001372.01.T01:CDS 40.0%
ACTACTTGTGAATTTCGGGA+GGG + Chr1:20066883-20066902 MsG0180001372.01.T01:intron 40.0%
ACTATCCTCAAGGTCAATGA+AGG - Chr1:20064665-20064684 None:intergenic 40.0%
AGATCTATATCGTTGAACCC+TGG - Chr1:20066695-20066714 None:intergenic 40.0%
AGGGTTCAACGATATAGATC+TGG + Chr1:20066694-20066713 MsG0180001372.01.T01:intron 40.0%
AGTATACGAGTCATGCTAAC+CGG + Chr1:20069007-20069026 MsG0180001372.01.T01:intron 40.0%
AGTTCTTTATCCTGTGCGAA+AGG + Chr1:20069153-20069172 MsG0180001372.01.T01:intron 40.0%
AGTTTCCCACTCTATCAATG+AGG + Chr1:20066551-20066570 MsG0180001372.01.T01:intron 40.0%
ATATCGTTGAACCCTGGATA+GGG - Chr1:20066689-20066708 None:intergenic 40.0%
ATATCTTGTTCACGACCTTG+TGG + Chr1:20066851-20066870 MsG0180001372.01.T01:intron 40.0%
ATGCCCTACTTGTAGGAAAA+AGG + Chr1:20069500-20069519 MsG0180001372.01.T01:CDS 40.0%
ATTGATAGAGTGGGAAACTG+GGG - Chr1:20066550-20066569 None:intergenic 40.0%
CAAAAACGTGTGTGAACCAT+GGG - Chr1:20066345-20066364 None:intergenic 40.0%
CAAATTGTAGGTTCATCCGT+AGG + Chr1:20068893-20068912 MsG0180001372.01.T01:intron 40.0%
CATCATCATCACTATCCTCA+AGG - Chr1:20064675-20064694 None:intergenic 40.0%
CATTGATAGAGTGGGAAACT+GGG - Chr1:20066551-20066570 None:intergenic 40.0%
CCATGGGACAATATTTCTTG+GGG - Chr1:20067737-20067756 None:intergenic 40.0%
CCTCCGTGAAGAAAGAAATA+CGG + Chr1:20066659-20066678 MsG0180001372.01.T01:intron 40.0%
CGTGGAATGATAGGTATATG+TGG - Chr1:20066119-20066138 None:intergenic 40.0%
CTACGGATGAACCTACAATT+TGG - Chr1:20068895-20068914 None:intergenic 40.0%
CTATCCTCAAGGTCAATGAA+GGG - Chr1:20064664-20064683 None:intergenic 40.0%
GAAGAAATGACAACAAGGTG+TGG + Chr1:20069426-20069445 MsG0180001372.01.T01:CDS 40.0%
GAGGAATAGTTGTACTCCTT+AGG - Chr1:20066002-20066021 None:intergenic 40.0%
GATGTTGAATGACCTCTGAT+TGG - Chr1:20066227-20066246 None:intergenic 40.0%
GGAATCCTAACATCATAAGC+CGG - Chr1:20068005-20068024 None:intergenic 40.0%
GGATTCACATGGAACATATG+TGG - Chr1:20065861-20065880 None:intergenic 40.0%
GGTAACCTCATTGATAGAGT+GGG - Chr1:20066559-20066578 None:intergenic 40.0%
GTCTTCTTCTTCAGGATAAG+TGG - Chr1:20066185-20066204 None:intergenic 40.0%
GTGCCTAAAGTTGCCAAAAT+GGG - Chr1:20066985-20067004 None:intergenic 40.0%
GTTCTTTATCCTGTGCGAAA+GGG + Chr1:20069154-20069173 MsG0180001372.01.T01:intron 40.0%
TACTTGGAAAGCTGTTCTTG+AGG - Chr1:20066021-20066040 None:intergenic 40.0%
TAGACGTCATATAGTTCGGT+TGG - Chr1:20065628-20065647 None:intergenic 40.0%
TAGGAACAAAAAGTTGTCGG+CGG - Chr1:20067644-20067663 None:intergenic 40.0%
TATATCGTTGAACCCTGGAT+AGG - Chr1:20066690-20066709 None:intergenic 40.0%
TCATTGATAGAGTGGGAAAC+TGG - Chr1:20066552-20066571 None:intergenic 40.0%
TCCATACATATTGGGCATCT+AGG - Chr1:20069396-20069415 None:intergenic 40.0%
TCGAGGTTCCTTCAAATCTT+TGG - Chr1:20066580-20066599 None:intergenic 40.0%
TGCGTGTTGTGTTCATGATT+TGG + Chr1:20065208-20065227 MsG0180001372.01.T01:intron 40.0%
TGGTAACCTCATTGATAGAG+TGG - Chr1:20066560-20066579 None:intergenic 40.0%
TGTTAGCCCTTTAGTGATCA+GGG + Chr1:20065670-20065689 MsG0180001372.01.T01:intron 40.0%
TTACGACTAATATTGCCGCT+CGG - Chr1:20068591-20068610 None:intergenic 40.0%
TTCACTTAGGAATCGAACTC+AGG + Chr1:20065752-20065771 MsG0180001372.01.T01:intron 40.0%
TTCTTTATCCTGTGCGAAAG+GGG + Chr1:20069155-20069174 MsG0180001372.01.T01:intron 40.0%
TTGCCAAAATGGGCATCTAA+TGG - Chr1:20066975-20066994 None:intergenic 40.0%
TTTGGAAGTCAATACTGGTG+GGG + Chr1:20068356-20068375 MsG0180001372.01.T01:CDS 40.0%
! ATGGGATCTCACTTTGGAAA+AGG - Chr1:20066327-20066346 None:intergenic 40.0%
! CAAAACCGGCTTATGATGTT+AGG + Chr1:20067997-20068016 MsG0180001372.01.T01:intron 40.0%
! CCATTTGCTAAATACCCCTT+CGG + Chr1:20066419-20066438 MsG0180001372.01.T01:intron 40.0%
! GAACATGCATTTTATGGCAG+TGG + Chr1:20069246-20069265 MsG0180001372.01.T01:intron 40.0%
! GTACCATTAGATGCCCATTT+TGG + Chr1:20066969-20066988 MsG0180001372.01.T01:intron 40.0%
! GTGACCTTTTTCCTACAAGT+AGG - Chr1:20069507-20069526 None:intergenic 40.0%
! TTCACCTAGATCTTTTGCTC+AGG + Chr1:20064705-20064724 MsG0180001372.01.T01:CDS 40.0%
! TTGACCATCAAAGTGTTTGG+AGG + Chr1:20066151-20066170 MsG0180001372.01.T01:intron 40.0%
! TTTTCCAAAGTGAGATCCCA+TGG + Chr1:20066326-20066345 MsG0180001372.01.T01:intron 40.0%
!! ACATAGTGATAATGGAGTCG+TGG + Chr1:20067037-20067056 MsG0180001372.01.T01:intron 40.0%
!! AGAGTATTGTCTCTGCAACA+GGG - Chr1:20067886-20067905 None:intergenic 40.0%
!! ATAGTGATAATGGAGTCGTG+GGG + Chr1:20067039-20067058 MsG0180001372.01.T01:intron 40.0%
!! ATGCCCATTTTGGCAACTTT+AGG + Chr1:20066979-20066998 MsG0180001372.01.T01:intron 40.0%
!! CATAGTGATAATGGAGTCGT+GGG + Chr1:20067038-20067057 MsG0180001372.01.T01:intron 40.0%
!! CGAAGGGGTATTTAGCAAAT+GGG - Chr1:20066421-20066440 None:intergenic 40.0%
!! TAGAGTATTGTCTCTGCAAC+AGG - Chr1:20067887-20067906 None:intergenic 40.0%
AAATACGGATAGCCCTATCC+AGG + Chr1:20066674-20066693 MsG0180001372.01.T01:intron 45.0%
AAGGAGAAATCGAAGAAGGG+TGG + Chr1:20064905-20064924 MsG0180001372.01.T01:CDS 45.0%
AATACGGATAGCCCTATCCA+GGG + Chr1:20066675-20066694 MsG0180001372.01.T01:intron 45.0%
ACCTTGTGCAAGGATTCACA+TGG - Chr1:20065872-20065891 None:intergenic 45.0%
AGACCCATTCTTATGTACGG+AGG - Chr1:20066466-20066485 None:intergenic 45.0%
AGGAGAAATCGAAGAAGGGT+GGG + Chr1:20064906-20064925 MsG0180001372.01.T01:CDS 45.0%
AGTAGTTTCACCAAGCCACA+AGG - Chr1:20066869-20066888 None:intergenic 45.0%
AGTGTTCGTAGCTATCCCTA+AGG + Chr1:20065983-20066002 MsG0180001372.01.T01:intron 45.0%
AGTTTGGGTCACTACCCTAA+TGG - Chr1:20065895-20065914 None:intergenic 45.0%
ATCCTTGCACAAGGTCCATT+AGG + Chr1:20065877-20065896 MsG0180001372.01.T01:intron 45.0%
ATGTGATCCCGTGTTCAGTT+TGG - Chr1:20065911-20065930 None:intergenic 45.0%
ATTGGCCCATACCATAATGG+GGG - Chr1:20065830-20065849 None:intergenic 45.0%
CAGCAGTAGTCTTCTTCTTC+AGG - Chr1:20066193-20066212 None:intergenic 45.0%
CATCATCACTGAAGGATCTC+AGG + Chr1:20066243-20066262 MsG0180001372.01.T01:intron 45.0%
CATTGGCCCATACCATAATG+GGG - Chr1:20065831-20065850 None:intergenic 45.0%
CCCCAAGAAATATTGTCCCA+TGG + Chr1:20067734-20067753 MsG0180001372.01.T01:intron 45.0%
CCGTATTTCTTTCTTCACGG+AGG - Chr1:20066662-20066681 None:intergenic 45.0%
CGCAAGGAGAAATCGAAGAA+GGG + Chr1:20064902-20064921 MsG0180001372.01.T01:CDS 45.0%
CGTGCCTAAAGTTGCCAAAA+TGG - Chr1:20066986-20067005 None:intergenic 45.0%
CTACTTGTGAATTTCGGGAG+GGG + Chr1:20066884-20066903 MsG0180001372.01.T01:intron 45.0%
CTTGTGCGCATAGCATAAGT+TGG - Chr1:20068294-20068313 None:intergenic 45.0%
GTAGTGACCCAAACTGAACA+CGG + Chr1:20065900-20065919 MsG0180001372.01.T01:intron 45.0%
GTGTTAGCCCTTTAGTGATC+AGG + Chr1:20065669-20065688 MsG0180001372.01.T01:intron 45.0%
GTTAGCCCTTTAGTGATCAG+GGG + Chr1:20065671-20065690 MsG0180001372.01.T01:intron 45.0%
TACTTGTGAATTTCGGGAGG+GGG + Chr1:20066885-20066904 MsG0180001372.01.T01:intron 45.0%
TAGGGATAGCTACGAACACT+TGG - Chr1:20065983-20066002 None:intergenic 45.0%
TAGTGACCCAAACTGAACAC+GGG + Chr1:20065901-20065920 MsG0180001372.01.T01:intron 45.0%
TCAATGAAGGGAACATGACG+AGG - Chr1:20064652-20064671 None:intergenic 45.0%
TCCATGTGAATCCTTGCACA+AGG + Chr1:20065868-20065887 MsG0180001372.01.T01:intron 45.0%
TCCTTGCACAAGGTCCATTA+GGG + Chr1:20065878-20065897 MsG0180001372.01.T01:intron 45.0%
TGAACCATGGGATCTCACTT+TGG - Chr1:20066333-20066352 None:intergenic 45.0%
TGACCATTCAATACACCGAG+CGG + Chr1:20068573-20068592 MsG0180001372.01.T01:intron 45.0%
TGTACGGAGGATATGGTGAA+TGG - Chr1:20066453-20066472 None:intergenic 45.0%
TGTGATCCCGTGTTCAGTTT+GGG - Chr1:20065910-20065929 None:intergenic 45.0%
TGTTCCCTTCATTGACCTTG+AGG + Chr1:20064657-20064676 MsG0180001372.01.T01:CDS 45.0%
! AGTAAGCGTCGTGGAATGAT+AGG - Chr1:20066128-20066147 None:intergenic 45.0%
! GGACGCACGTTGTACTTTTA+TGG - Chr1:20066641-20066660 None:intergenic 45.0%
! GGGGTATTTAGCAAATGGGT+GGG - Chr1:20066417-20066436 None:intergenic 45.0%
! TCTCTAGAGGGATTTGATCG+AGG - Chr1:20066597-20066616 None:intergenic 45.0%
!! AACGGCTTTGTTGGCAACTT+TGG - Chr1:20067928-20067947 None:intergenic 45.0%
!! AAGCTTGGTGGTGTGTATCT+AGG - Chr1:20067663-20067682 None:intergenic 45.0%
!! AGGGGTATTTAGCAAATGGG+TGG - Chr1:20066418-20066437 None:intergenic 45.0%
!! CATCATAAGCCGGTTTTGTG+TGG - Chr1:20067995-20068014 None:intergenic 45.0%
!! CCGAAGGGGTATTTAGCAAA+TGG - Chr1:20066422-20066441 None:intergenic 45.0%
!! AAAAAATAAATTCATAATTT+GGG + Chr1:20068662-20068681 MsG0180001372.01.T01:intron 5.0%
!! AAGTTAAAAAAATAATAATT+AGG + Chr1:20068713-20068732 MsG0180001372.01.T01:intron 5.0%
!! AGTTAAAAAAATAATAATTA+GGG + Chr1:20068714-20068733 MsG0180001372.01.T01:intron 5.0%
!!! AAATTATGAATTTATTTTTT+GGG - Chr1:20068662-20068681 None:intergenic 5.0%
AACGTCAACCTTCAGCCGAA+AGG + Chr1:20066521-20066540 MsG0180001372.01.T01:intron 50.0%
AATCGAAGAAGGGTGGGAAC+TGG + Chr1:20064912-20064931 MsG0180001372.01.T01:CDS 50.0%
ACCAGCCTTCTCACTACTAC+TGG + Chr1:20066771-20066790 MsG0180001372.01.T01:intron 50.0%
ACGTCAACCTTCAGCCGAAA+GGG + Chr1:20066522-20066541 MsG0180001372.01.T01:intron 50.0%
ACTTGTGAATTTCGGGAGGG+GGG + Chr1:20066886-20066905 MsG0180001372.01.T01:intron 50.0%
ATTGGGCATCTAGGTTCCTC+TGG - Chr1:20069387-20069406 None:intergenic 50.0%
CAGGTCATAACCCTCGTAGT+GGG - Chr1:20066819-20066838 None:intergenic 50.0%
CCTGTGAGATTAGTGCCACA+CGG - Chr1:20065957-20065976 None:intergenic 50.0%
CTCGCTTTGACCCCGTTATA+GGG - Chr1:20067069-20067088 None:intergenic 50.0%
GCATGGCTTGAACTACCATC+AGG - Chr1:20066739-20066758 None:intergenic 50.0%
GCGCAAGGAGAAATCGAAGA+AGG + Chr1:20064901-20064920 MsG0180001372.01.T01:CDS 50.0%
GGGTCTATCTCCAACATCTC+AGG + Chr1:20066480-20066499 MsG0180001372.01.T01:intron 50.0%
GTGTACCAGTCGACAACTGT+CGG - Chr1:20066369-20066388 None:intergenic 50.0%
GTTAGGTGCTCCTGAGATGT+TGG - Chr1:20066493-20066512 None:intergenic 50.0%
GTTGACGTTACCGGAAGGTT+AGG - Chr1:20066510-20066529 None:intergenic 50.0%
TACGAGGGTTATGACCTGCA+AGG + Chr1:20066821-20066840 MsG0180001372.01.T01:intron 50.0%
TGAAGGTTGACGTTACCGGA+AGG - Chr1:20066515-20066534 None:intergenic 50.0%
TGCTAAATACCCCTTCGGCA+GGG + Chr1:20066424-20066443 MsG0180001372.01.T01:intron 50.0%
TTACCCCAACTTAGTCCGTG+TGG + Chr1:20065939-20065958 MsG0180001372.01.T01:intron 50.0%
TTGCTAAATACCCCTTCGGC+AGG + Chr1:20066423-20066442 MsG0180001372.01.T01:intron 50.0%
TTGTTCACGACCTTGTGGCT+TGG + Chr1:20066856-20066875 MsG0180001372.01.T01:intron 50.0%
TTTGTCCGACAGTTGTCGAC+TGG + Chr1:20066361-20066380 MsG0180001372.01.T01:intron 50.0%
! ACCCTAATGGACCTTGTGCA+AGG - Chr1:20065882-20065901 None:intergenic 50.0%
! AGGGGAGGGCCTTGATATTT+TGG + Chr1:20065689-20065708 MsG0180001372.01.T01:intron 50.0%
! AGTGCCACACGGACTAAGTT+GGG - Chr1:20065946-20065965 None:intergenic 50.0%
! GATGGAAGTGCACCAATCAG+AGG + Chr1:20066212-20066231 MsG0180001372.01.T01:intron 50.0%
! GGTCAAGTAAGTAAGCGTCG+TGG - Chr1:20066137-20066156 None:intergenic 50.0%
! TAGTGCCACACGGACTAAGT+TGG - Chr1:20065947-20065966 None:intergenic 50.0%
! TGAAGCATCTGATCCTCCAG+AGG + Chr1:20069368-20069387 MsG0180001372.01.T01:CDS 50.0%
!! GTGGGAACTGGCTCGAATTT+GGG + Chr1:20064924-20064943 MsG0180001372.01.T01:CDS 50.0%
!! TTGCCGCTCGGTGTATTGAA+TGG - Chr1:20068579-20068598 None:intergenic 50.0%
ACTACTGGCCACGCAAAGAG+AGG + Chr1:20066786-20066805 MsG0180001372.01.T01:intron 55.0%
AGCCCTTTAGTGATCAGGGG+AGG + Chr1:20065674-20065693 MsG0180001372.01.T01:intron 55.0%
AGGGATCGTTCCCACTACGA+GGG + Chr1:20066806-20066825 MsG0180001372.01.T01:intron 55.0%
CACTGAAGGATCTCAGGTCC+AGG + Chr1:20066249-20066268 MsG0180001372.01.T01:intron 55.0%
CCGTGTGGCACTAATCTCAC+AGG + Chr1:20065954-20065973 MsG0180001372.01.T01:intron 55.0%
CCTCGCTTTGACCCCGTTAT+AGG - Chr1:20067070-20067089 None:intergenic 55.0%
CGGCTGAAGGTTGACGTTAC+CGG - Chr1:20066519-20066538 None:intergenic 55.0%
CGTCAACCTTCAGCCGAAAG+GGG + Chr1:20066523-20066542 MsG0180001372.01.T01:intron 55.0%
CGTCATCTTAGGCAAGCGCA+AGG + Chr1:20064886-20064905 MsG0180001372.01.T01:intron 55.0%
CGTGGCCAGTAGTAGTGAGA+AGG - Chr1:20066779-20066798 None:intergenic 55.0%
CTACTGGCCACGCAAAGAGA+GGG + Chr1:20066787-20066806 MsG0180001372.01.T01:intron 55.0%
CTGCAACAGGGTAGAGTGGA+AGG - Chr1:20067874-20067893 None:intergenic 55.0%
CTTCTTTAGCCGGTGCTCTC+GGG - Chr1:20069040-20069059 None:intergenic 55.0%
GAAACGGCCCTGCGTAATAG+TGG + Chr1:20068930-20068949 MsG0180001372.01.T01:intron 55.0%
GAACGATCCCTCTCTTTGCG+TGG - Chr1:20066797-20066816 None:intergenic 55.0%
GCAGGTCATAACCCTCGTAG+TGG - Chr1:20066820-20066839 None:intergenic 55.0%
GCCAGTAGTAGTGAGAAGGC+TGG - Chr1:20066775-20066794 None:intergenic 55.0%
GCCCTCCCCTGATCACTAAA+GGG - Chr1:20065679-20065698 None:intergenic 55.0%
GCCCTTTAGTGATCAGGGGA+GGG + Chr1:20065675-20065694 MsG0180001372.01.T01:intron 55.0%
GCTAAATACCCCTTCGGCAG+GGG + Chr1:20066425-20066444 MsG0180001372.01.T01:intron 55.0%
GCTTCTTTAGCCGGTGCTCT+CGG - Chr1:20069041-20069060 None:intergenic 55.0%
GGAAGTCAATACTGGTGGGG+AGG + Chr1:20068359-20068378 MsG0180001372.01.T01:CDS 55.0%
GGCCACCAGCATCTCAGAAA+CGG + Chr1:20068914-20068933 MsG0180001372.01.T01:intron 55.0%
GGGAACATGACGAGGTTCTG+AGG - Chr1:20064644-20064663 None:intergenic 55.0%
GTCAACCTTCAGCCGAAAGG+GGG + Chr1:20066524-20066543 MsG0180001372.01.T01:intron 55.0%
GTCTCTGCAACAGGGTAGAG+TGG - Chr1:20067878-20067897 None:intergenic 55.0%
TGGGACGCATTGCAACCTGA+TGG + Chr1:20066721-20066740 MsG0180001372.01.T01:intron 55.0%
! CCTATAACGGGGTCAAAGCG+AGG + Chr1:20067067-20067086 MsG0180001372.01.T01:intron 55.0%
! GTGCCACACGGACTAAGTTG+GGG - Chr1:20065945-20065964 None:intergenic 55.0%
! TCTGAGATGCTGGTGGCCTA+CGG - Chr1:20068912-20068931 None:intergenic 55.0%
!! CTCAGGAGCACCTAACCTTC+CGG + Chr1:20066497-20066516 MsG0180001372.01.T01:intron 55.0%
!! GGTGGGAACTGGCTCGAATT+TGG + Chr1:20064923-20064942 MsG0180001372.01.T01:CDS 55.0%
!! TCGTGGGGAGCACCCTATAA+CGG + Chr1:20067054-20067073 MsG0180001372.01.T01:intron 55.0%
GAGGGATCGTTCCCACTACG+AGG + Chr1:20066805-20066824 MsG0180001372.01.T01:intron 60.0%
GGCCCTCCCCTGATCACTAA+AGG - Chr1:20065680-20065699 None:intergenic 60.0%
GGGCATCTAGGTTCCTCTGG+AGG - Chr1:20069384-20069403 None:intergenic 60.0%
TGAATGGCTCCCCTGCCGAA+GGG - Chr1:20066437-20066456 None:intergenic 60.0%
! AATCGGTGCCCCTTTCGCAC+AGG - Chr1:20069166-20069185 None:intergenic 60.0%
!! CAGGGCCGTTTCTGAGATGC+TGG - Chr1:20068922-20068941 None:intergenic 60.0%
!! CGTGGGGAGCACCCTATAAC+GGG + Chr1:20067055-20067074 MsG0180001372.01.T01:intron 60.0%
!! GGCCGTTTCTGAGATGCTGG+TGG - Chr1:20068919-20068938 None:intergenic 60.0%
!! GTGGGGAGCACCCTATAACG+GGG + Chr1:20067056-20067075 MsG0180001372.01.T01:intron 60.0%
GAATGGCTCCCCTGCCGAAG+GGG - Chr1:20066436-20066455 None:intergenic 65.0%
GGGAAACTGGGGCCCCCTTT+CGG - Chr1:20066539-20066558 None:intergenic 65.0%
GGTGCTCTCGGGACACACAC+CGG - Chr1:20069029-20069048 None:intergenic 65.0%
GTGAATGGCTCCCCTGCCGA+AGG - Chr1:20066438-20066457 None:intergenic 65.0%
! GGTGTGTGTCCCGAGAGCAC+CGG + Chr1:20069028-20069047 MsG0180001372.01.T01:intron 65.0%
TGGGGCCCCCTTTCGGCTGA+AGG - Chr1:20066532-20066551 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 20064628 20069569 20064628 ID=MsG0180001372.01;Name=MsG0180001372.01
Chr1 mRNA 20064628 20069569 20064628 ID=MsG0180001372.01.T01;Parent=MsG0180001372.01;Name=MsG0180001372.01.T01;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|4|0|169
Chr1 exon 20064628 20064726 20064628 ID=MsG0180001372.01.T01:exon:26080;Parent=MsG0180001372.01.T01
Chr1 exon 20064897 20064945 20064897 ID=MsG0180001372.01.T01:exon:26081;Parent=MsG0180001372.01.T01
Chr1 exon 20068277 20068380 20068277 ID=MsG0180001372.01.T01:exon:26082;Parent=MsG0180001372.01.T01
Chr1 exon 20069312 20069569 20069312 ID=MsG0180001372.01.T01:exon:26083;Parent=MsG0180001372.01.T01
Chr1 CDS 20064628 20064726 20064628 ID=MsG0180001372.01.T01:cds;Parent=MsG0180001372.01.T01
Chr1 CDS 20064897 20064945 20064897 ID=MsG0180001372.01.T01:cds;Parent=MsG0180001372.01.T01
Chr1 CDS 20068277 20068380 20068277 ID=MsG0180001372.01.T01:cds;Parent=MsG0180001372.01.T01
Chr1 CDS 20069312 20069569 20069312 ID=MsG0180001372.01.T01:cds;Parent=MsG0180001372.01.T01
Gene Sequence

>MsG0180001372.01.T01

ATGAGTGAGGGGTCCTCAGAACCTCGTCATGTTCCCTTCATTGACCTTGAGGATAGTGATGATGATGTCATTGAATCTTCACCTAGATCTTTTGCTCAGGCAAGCGCAAGGAGAAATCGAAGAAGGGTGGGAACTGGCTCGAATTTGGGAAGTCAAACTATACCAACTTATGCTATGCGCACAAGAGAGCAACGCAGAATCGAACCAATTGCTGATGTTTATATAAATTTGGAAGTCAATACTGGTGGGGAGGCAGAGAATGCCAAAAATTCAGCTGAAACTAAGAAGGAAGCCTTAGAGCCTAATATTGAAGCATCTGATCCTCCAGAGGAACCTAGATGCCCAATATGTATGGATCCTTTTGTGGAAGAAATGACAACAAGGTGTGGACATATTTTTTGCAAGAATTGCATCAAAAATGTAATAAGAATACAAGGAAAATGCCCTACTTGTAGGAAAAAGGTCACTTCAAGACAGCTAATAAAGGTGTTTCTTCCATCTTTCGGTTGA
Protein sequence

>MsG0180001372.01.T01

MSEGSSEPRHVPFIDLEDSDDDVIESSPRSFAQASARRNRRRVGTGSNLGSQTIPTYAMRTREQRRIEPIADVYINLEVNTGGEAENAKNSAETKKEALEPNIEASDPPEEPRCPICMDPFVEEMTTRCGHIFCKNCIKNVIRIQGKCPTCRKKVTSRQLIKVFLPSFG*