AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006459.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006459.01.T04 MTR_2g008750 93.023 129 9 0 2 130 517 645 2.21e-81 251
MsG0280006459.01.T04 MTR_2g008750 93.023 129 9 0 2 130 533 661 4.70e-81 251
MsG0280006459.01.T04 MTR_4g094248 59.677 124 49 1 2 124 463 586 1.18e-43 150
MsG0280006459.01.T02 MTR_2g008750 89.058 329 35 1 51 378 98 426 0.0 596
MsG0280006459.01.T02 MTR_2g008750 89.058 329 35 1 51 378 114 442 0.0 595
MsG0280006459.01.T02 MTR_4g094248 54.545 330 136 6 48 364 27 355 6.25e-97 300
MsG0280006459.01.T03 MTR_2g008750 89.058 329 35 1 51 378 98 426 0.0 596
MsG0280006459.01.T03 MTR_2g008750 89.058 329 35 1 51 378 114 442 0.0 595
MsG0280006459.01.T03 MTR_4g094248 54.545 330 136 6 48 364 27 355 6.25e-97 300
MsG0280006459.01.T01 MTR_2g008750 89.058 329 35 1 51 378 98 426 0.0 596
MsG0280006459.01.T01 MTR_2g008750 89.058 329 35 1 51 378 114 442 0.0 595
MsG0280006459.01.T01 MTR_4g094248 54.545 330 136 6 48 364 27 355 6.25e-97 300
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006459.01.T04 AT5G64170 52.885 104 44 1 2 105 443 541 7.11e-25 98.6
MsG0280006459.01.T04 AT5G64170 52.885 104 44 1 2 105 493 591 7.88e-25 98.6
MsG0280006459.01.T04 AT5G64170 52.885 104 44 1 2 105 493 591 7.88e-25 98.6
MsG0280006459.01.T04 AT3G54500 46.341 82 39 2 2 80 410 489 1.32e-15 72.4
MsG0280006459.01.T04 AT3G54500 46.341 82 39 2 2 80 410 489 1.32e-15 72.4
MsG0280006459.01.T04 AT3G54500 46.341 82 39 2 2 80 490 569 1.54e-15 72.0
MsG0280006459.01.T04 AT3G54500 46.341 82 39 2 2 80 490 569 1.54e-15 72.0
MsG0280006459.01.T04 AT3G54500 46.341 82 39 2 2 80 294 373 1.55e-15 72.0
MsG0280006459.01.T04 AT3G54500 46.341 82 39 2 2 80 489 568 1.58e-15 72.0
MsG0280006459.01.T04 AT3G54500 46.341 82 39 2 2 80 521 600 1.95e-15 72.0
MsG0280006459.01.T04 AT3G54500 46.341 82 39 2 2 80 504 583 2.02e-15 71.6
MsG0280006459.01.T02 AT5G64170 37.879 132 59 5 56 171 50 174 1.62e-14 75.5
MsG0280006459.01.T02 AT5G64170 37.879 132 59 5 56 171 100 224 1.95e-14 75.5
MsG0280006459.01.T02 AT5G64170 37.879 132 59 5 56 171 100 224 1.95e-14 75.5
MsG0280006459.01.T03 AT5G64170 37.879 132 59 5 56 171 50 174 1.62e-14 75.5
MsG0280006459.01.T03 AT5G64170 37.879 132 59 5 56 171 100 224 1.95e-14 75.5
MsG0280006459.01.T03 AT5G64170 37.879 132 59 5 56 171 100 224 1.95e-14 75.5
MsG0280006459.01.T01 AT5G64170 37.879 132 59 5 56 171 50 174 1.62e-14 75.5
MsG0280006459.01.T01 AT5G64170 37.879 132 59 5 56 171 100 224 1.95e-14 75.5
MsG0280006459.01.T01 AT5G64170 37.879 132 59 5 56 171 100 224 1.95e-14 75.5

Find 80 sgRNAs with CRISPR-Local

Find 437 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGTTCTGCTTATGCTTC+TGG 0.212108 2:+2196836 None:intergenic
TTAGAGCATGACTAAATTCT+AGG 0.239335 2:+2196767 None:intergenic
TTTGAGCAAGAAGTGATTAT+TGG 0.248089 2:+2202467 None:intergenic
CTAGACCAAAACAATTCTTT+TGG 0.257173 2:-2195704 MsG0280006459.01.T03:three_prime_UTR
TAATAAACCTTAGCCTCTTT+TGG 0.278943 2:+2196114 None:intergenic
AACATAGATTCTAATTCTTT+AGG 0.286126 2:-2196820 MsG0280006459.01.T03:CDS
GATAACACATAGCTTCATTC+AGG 0.300925 2:-2195641 MsG0280006459.01.T03:three_prime_UTR
TAGATCCAAAAGAATTGTTT+TGG 0.310686 2:+2195699 None:intergenic
ACTGTCCCTTATGCACAATT+TGG 0.312260 2:+2196015 None:intergenic
TCACTCTCTTCGACTTTCTC+TGG 0.316838 2:-2196736 MsG0280006459.01.T03:CDS
TTCTTGCTCAAATCACGTTT+TGG 0.331757 2:-2202456 MsG0280006459.01.T03:five_prime_UTR
ATAGTTCTCATGGTCATTCT+TGG 0.336706 2:-2196645 MsG0280006459.01.T03:CDS
TATTGCTCAGGAGGAGTATA+AGG 0.347713 2:+2196919 None:intergenic
TATTTGCTTCAAGTGAGTTT+TGG 0.354113 2:+2196368 None:intergenic
TTGAAGGAAGAAGAGTCTTC+TGG 0.357979 2:-2202534 MsG0280006459.01.T03:five_prime_UTR
TCTAGTGGTGTTACTTCTCT+TGG 0.358437 2:-2196865 MsG0280006459.01.T03:CDS
CGCTTTCCTGCTGATGACTT+TGG 0.359406 2:+2196964 None:intergenic
TTGAAAGGTGCAATATCGTT+TGG 0.378904 2:+2195519 None:intergenic
TTAAAACCAAATTGTGCATA+AGG 0.389416 2:-2196021 MsG0280006459.01.T03:three_prime_UTR
CTAAATTCTAGGTGCGTTGA+AGG 0.397226 2:+2196778 None:intergenic
CCTGTTCCAACACCTGTTGC+AGG 0.401689 2:+2196335 None:intergenic
TTGGTCCAGAGAAGAGCTTA+TGG 0.412463 2:+2196387 None:intergenic
TGGTCCAGAGAAGAGCTTAT+GGG 0.423154 2:+2196388 None:intergenic
TCGTTTGGAAGCAAAGTTGA+TGG 0.437120 2:+2195534 None:intergenic
CTCACCCATAAGCTCTTCTC+TGG 0.441799 2:-2196392 MsG0280006459.01.T03:three_prime_UTR
CTCTGAAGCCACTTTACAAC+AGG 0.443435 2:+2195825 None:intergenic
TGTGCTATAGACCGATCAAT+AGG 0.452786 2:+2195582 None:intergenic
CGCCTTGAATGTATCATTAG+TGG 0.453007 2:-2200426 MsG0280006459.01.T03:five_prime_UTR
GTCAAACATCTGTATGTTTG+AGG 0.458710 2:-2200380 MsG0280006459.01.T03:intron
CAGTCAAGGTTCTTCTCAGC+AGG 0.459504 2:-2196513 MsG0280006459.01.T03:three_prime_UTR
TTGCCACCTGCAACAGGTGT+TGG 0.465856 2:-2196341 MsG0280006459.01.T03:three_prime_UTR
GCTCAGCACTCTTAGCTAAA+CGG 0.468585 2:+2195987 None:intergenic
CCTGCAACAGGTGTTGGAAC+AGG 0.472185 2:-2196335 MsG0280006459.01.T03:three_prime_UTR
GTTCTCATGGTCATTCTTGG+TGG 0.477755 2:-2196642 MsG0280006459.01.T03:CDS
CACCACTAATGATACATTCA+AGG 0.478639 2:+2200424 None:intergenic
TTGTAAACCAAAAGAGGCTA+AGG 0.481671 2:-2196121 MsG0280006459.01.T03:three_prime_UTR
TAAAACCAAATTGTGCATAA+GGG 0.485364 2:-2196020 MsG0280006459.01.T03:three_prime_UTR
TAGCACACTTATTGTTTCAC+AGG 0.486283 2:-2195566 MsG0280006459.01.T03:three_prime_UTR
TTTATGTCTGCATATTGCTC+AGG 0.486638 2:+2196907 None:intergenic
TGCACAAACTTGAACATCAC+AGG 0.488883 2:+2196303 None:intergenic
ATGAAAACATACCGCTGCAT+TGG 0.490304 2:+2195494 None:intergenic
TCCTACTTAAGAGGTGATCA+TGG 0.490865 2:+2196576 None:intergenic
ACAAACGCAAATGGTTGCAT+TGG 0.499312 2:-2195950 MsG0280006459.01.T03:three_prime_UTR
TAAGACAAATCTATAAATGA+AGG 0.506723 2:+2196682 None:intergenic
ATAGCTTCATTCAGGTGTAC+AGG 0.507893 2:-2195633 MsG0280006459.01.T03:three_prime_UTR
ATGAGAACTATCCATGTTTG+AGG 0.517385 2:+2196657 None:intergenic
CATATTATAACAAACGCAAA+TGG 0.523301 2:-2195959 MsG0280006459.01.T03:three_prime_UTR
TCATTTGAAAATGAAAATGA+AGG 0.523574 2:-2196483 MsG0280006459.01.T03:three_prime_UTR
AGAAGTAACACCACTAGAAG+AGG 0.527293 2:+2196870 None:intergenic
TGTCTCGATAACAAGGTAGC+TGG 0.536911 2:-2195848 MsG0280006459.01.T03:three_prime_UTR
AAGCTTCCAAAGTCATCAGC+AGG 0.541829 2:-2196970 MsG0280006459.01.T03:CDS
TAAAGTTCGAGGGGTAGTCT+AGG 0.543124 2:-2196454 MsG0280006459.01.T03:three_prime_UTR
CCGATCAATAGGATTTGTGT+TGG 0.547237 2:+2195593 None:intergenic
ATGCAGAGACACAATGGCTC+AGG 0.555984 2:-2195912 MsG0280006459.01.T03:three_prime_UTR
TCAAACATGGATAGTTCTCA+TGG 0.564829 2:-2196655 MsG0280006459.01.T03:CDS
ATGCTTAATAAACATGACAT+TGG 0.568380 2:-2200453 MsG0280006459.01.T03:five_prime_UTR
GAAGGTCATAGTAAAGTTCG+AGG 0.569058 2:-2196465 MsG0280006459.01.T03:three_prime_UTR
CAGATGTTTGACATTCATCT+CGG 0.573495 2:+2200391 None:intergenic
CGGTGTGGAGCCTCTTCTAG+TGG 0.574208 2:-2196880 MsG0280006459.01.T03:CDS
TTTGTCTTATGCCTCAAACA+TGG 0.576290 2:-2196668 MsG0280006459.01.T03:CDS
AGCAAAGTTGATGGATCTGT+CGG 0.576326 2:+2195543 None:intergenic
ACCGCTGCATTGGATTTGAA+AGG 0.582968 2:+2195504 None:intergenic
ATGTCTGCATATTGCTCAGG+AGG 0.584113 2:+2196910 None:intergenic
GAAATGCTATTTCACAGTCA+AGG 0.584593 2:-2196527 MsG0280006459.01.T03:three_prime_UTR
CCAACACAAATCCTATTGAT+CGG 0.586181 2:-2195593 MsG0280006459.01.T03:three_prime_UTR
GCCATGATCACCTCTTAAGT+AGG 0.587338 2:-2196577 MsG0280006459.01.T03:exon
GTAGCTGGCCTGTTGTAAAG+TGG 0.591311 2:-2195833 MsG0280006459.01.T03:three_prime_UTR
CAGAAAACAAAATGAAAACA+AGG 0.591861 2:-2196170 MsG0280006459.01.T03:three_prime_UTR
ATTAATCTGTCTCGATAACA+AGG 0.599762 2:-2195855 MsG0280006459.01.T03:three_prime_UTR
GCAAATGGTTGCATTGGAGA+TGG 0.602010 2:-2195944 MsG0280006459.01.T03:three_prime_UTR
GGATTAAGAGCTGAACATGA+CGG 0.610788 2:-2196715 MsG0280006459.01.T03:CDS
ACCTTTCAAATCCAATGCAG+CGG 0.619682 2:-2195505 MsG0280006459.01.T03:intron
CTTGAATGTATCATTAGTGG+TGG 0.631648 2:-2200423 MsG0280006459.01.T03:five_prime_UTR
CAATGGCTCAGGATACAAGC+AGG 0.636267 2:-2195901 MsG0280006459.01.T03:three_prime_UTR
AAGGTCATAGTAAAGTTCGA+GGG 0.639450 2:-2196464 MsG0280006459.01.T03:three_prime_UTR
TGAAGCATGCAGAGACACAA+TGG 0.643751 2:-2195918 MsG0280006459.01.T03:three_prime_UTR
GTTCCAACACCTGTTGCAGG+TGG 0.671411 2:+2196338 None:intergenic
AGGTCATAGTAAAGTTCGAG+GGG 0.696049 2:-2196463 MsG0280006459.01.T03:three_prime_UTR
GCAGACATAAATCAGCGGTG+TGG 0.709486 2:-2196895 MsG0280006459.01.T03:CDS
AATATGCAGACATAAATCAG+CGG 0.754231 2:-2196900 MsG0280006459.01.T03:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATCAAATGTTATATTTA+TGG + Chr2:2196287-2196306 None:intergenic 10.0%
!!! TTTTTATAGAAGATAAATAT+TGG - Chr2:2195946-2195965 MsG0280006459.01.T03:three_prime_UTR 10.0%
!! AAGATGATGTATAATTATTT+CGG - Chr2:2202223-2202242 MsG0280006459.01.T03:five_prime_UTR 15.0%
!! TAATATTGTATTTCAAATAC+TGG + Chr2:2197128-2197147 None:intergenic 15.0%
!! TATTAAAACAAAGTAAAAAC+AGG + Chr2:2201229-2201248 None:intergenic 15.0%
!! TTGATTTACAAAGAAAAAAT+AGG + Chr2:2195798-2195817 None:intergenic 15.0%
!!! AAAACATTTTAACTATAAGT+TGG - Chr2:2195617-2195636 MsG0280006459.01.T03:three_prime_UTR 15.0%
!!! AAATTGTCAGAATTTAAAAT+AGG + Chr2:2196023-2196042 None:intergenic 15.0%
!!! AACTGTCAAATTTTAAAATA+AGG - Chr2:2196211-2196230 MsG0280006459.01.T03:three_prime_UTR 15.0%
!!! AATTGTCAGAATTTAAAATA+GGG + Chr2:2196022-2196041 None:intergenic 15.0%
!!! ACTGTCAAATTTTAAAATAA+GGG - Chr2:2196212-2196231 MsG0280006459.01.T03:three_prime_UTR 15.0%
!!! ATTTTAAAATTTGACAGTTT+TGG + Chr2:2196210-2196229 None:intergenic 15.0%
!!! GAATAACAAAAGAATTTTTT+TGG + Chr2:2201729-2201748 None:intergenic 15.0%
!!! GTATTTTTGAACTAAAAATT+GGG - Chr2:2196054-2196073 MsG0280006459.01.T03:three_prime_UTR 15.0%
!!! TACAAAAATAATTTGTCAAA+GGG + Chr2:2196537-2196556 None:intergenic 15.0%
!!! TATATATTAGTATCTGATTT+TGG - Chr2:2197973-2197992 MsG0280006459.01.T03:CDS 15.0%
!!! TATTTTTGAACTAAAAATTG+GGG - Chr2:2196055-2196074 MsG0280006459.01.T03:three_prime_UTR 15.0%
!!! TTATTTATTTTGTTATACGA+GGG + Chr2:2198437-2198456 None:intergenic 15.0%
!!! TTTATTTATTTTGTTATACG+AGG + Chr2:2198438-2198457 None:intergenic 15.0%
!!! TTTCTATTTTTCTCTTTATT+GGG - Chr2:2198665-2198684 MsG0280006459.01.T03:intron 15.0%
!!! TTTTCTAAATATAAACATCT+TGG + Chr2:2200004-2200023 None:intergenic 15.0%
!!! TTTTCTATTTTTCTCTTTAT+TGG - Chr2:2198664-2198683 MsG0280006459.01.T03:intron 15.0%
!! AAAAAAACACTTATTTATGC+TGG + Chr2:2197587-2197606 None:intergenic 20.0%
!! AAAAAACACTTATTTATGCT+GGG + Chr2:2197586-2197605 None:intergenic 20.0%
!! AAACATATCAGAATACAATA+TGG - Chr2:2199562-2199581 MsG0280006459.01.T03:intron 20.0%
!! AAATTGAAGATCCAAAATAT+TGG + Chr2:2195377-2195396 None:intergenic 20.0%
!! AACATAGATTCTAATTCTTT+AGG - Chr2:2200638-2200657 MsG0280006459.01.T03:five_prime_UTR 20.0%
!! AATAATCAGTTTGTAATAGA+GGG - Chr2:2198843-2198862 MsG0280006459.01.T03:intron 20.0%
!! ACAAGTAACCATAATAAAAA+TGG + Chr2:2195920-2195939 None:intergenic 20.0%
!! ATAATTATTTCGGATTTACT+TGG - Chr2:2202233-2202252 MsG0280006459.01.T03:five_prime_UTR 20.0%
!! ATTTAGAAAAAAAATGAGCA+AGG + Chr2:2195409-2195428 None:intergenic 20.0%
!! GAGTTTCAAAAATGAAAAAA+GGG - Chr2:2200903-2200922 MsG0280006459.01.T03:five_prime_UTR 20.0%
!! GTAAATCTCATAGATATAAA+TGG + Chr2:2195163-2195182 None:intergenic 20.0%
!! TAAGACAAATCTATAAATGA+AGG + Chr2:2200779-2200798 None:intergenic 20.0%
!! TACAAAGAAAAAATAGGTAT+TGG + Chr2:2195792-2195811 None:intergenic 20.0%
!! TACTGATATAAACATTTATG+AGG - Chr2:2195488-2195507 MsG0280006459.01.T03:intron 20.0%
!! TCACTTCTCAATTATAATAA+TGG - Chr2:2197535-2197554 MsG0280006459.01.T03:intron 20.0%
!! TCATATGGTAAATAGTAAAA+AGG + Chr2:2198500-2198519 None:intergenic 20.0%
!! TCATTTGAAAATGAAAATGA+AGG - Chr2:2200975-2200994 MsG0280006459.01.T03:five_prime_UTR 20.0%
!! TGAAATACAATATTACTTTG+CGG - Chr2:2197133-2197152 MsG0280006459.01.T03:intron 20.0%
!! TTATAATAATGGTTCAGTTT+AGG - Chr2:2197546-2197565 MsG0280006459.01.T03:intron 20.0%
!!! AAAATGAACTTCCAATATTT+TGG - Chr2:2195363-2195382 MsG0280006459.01.T03:three_prime_UTR 20.0%
!!! AATTAACTAACCTTTTCTTT+CGG + Chr2:2199761-2199780 None:intergenic 20.0%
!!! ATTTTTAGTTCAAAAATACG+TGG + Chr2:2196053-2196072 None:intergenic 20.0%
!!! CATAAATTCTTTCATTTTGA+GGG - Chr2:2200304-2200323 MsG0280006459.01.T03:intron 20.0%
!!! CGTATTTTTGAACTAAAAAT+TGG - Chr2:2196053-2196072 MsG0280006459.01.T03:three_prime_UTR 20.0%
!!! GTACAAAAATAATTTGTCAA+AGG + Chr2:2196538-2196557 None:intergenic 20.0%
!!! TAAGTCATATATTCTAGAAT+GGG - Chr2:2199943-2199962 MsG0280006459.01.T03:intron 20.0%
!!! TATTCTGATATGTTTTTCAA+TGG + Chr2:2199557-2199576 None:intergenic 20.0%
!!! TCAAAGATATTTTTCAATCA+TGG + Chr2:2196977-2196996 None:intergenic 20.0%
!!! TCATAAATTCTTTCATTTTG+AGG - Chr2:2200303-2200322 MsG0280006459.01.T03:intron 20.0%
!!! TTTTTTCGCCATTTTTATTA+TGG - Chr2:2195909-2195928 MsG0280006459.01.T03:three_prime_UTR 20.0%
! AATGAAAGAATACCAGAAAA+AGG - Chr2:2198977-2198996 MsG0280006459.01.T03:intron 25.0%
! AATTCCTTAACGTAAAAAAG+GGG + Chr2:2200043-2200062 None:intergenic 25.0%
! ACAGAATGCTTAACATTATA+TGG + Chr2:2197940-2197959 None:intergenic 25.0%
! ACTTTAGATATGGTTATGAT+TGG - Chr2:2196945-2196964 MsG0280006459.01.T03:CDS 25.0%
! AGAGAAAGTTGTCATAAAAA+TGG + Chr2:2195720-2195739 None:intergenic 25.0%
! AGTTGTCACCAAAAAAAAAA+AGG + Chr2:2195527-2195546 None:intergenic 25.0%
! ATAAAAGCAAACATCTTATG+AGG - Chr2:2198453-2198472 MsG0280006459.01.T03:intron 25.0%
! ATAGATACCTATAATTGCAA+CGG - Chr2:2196457-2196476 MsG0280006459.01.T03:three_prime_UTR 25.0%
! ATGCTTAATAAACATGACAT+TGG - Chr2:2197005-2197024 MsG0280006459.01.T03:intron 25.0%
! ATTTCAATGAATGTGTTACA+GGG + Chr2:2197718-2197737 None:intergenic 25.0%
! CAATAATCAGTTTGTAATAG+AGG - Chr2:2198842-2198861 MsG0280006459.01.T03:intron 25.0%
! CAATTCCTTAACGTAAAAAA+GGG + Chr2:2200044-2200063 None:intergenic 25.0%
! CAGAAAACAAAATGAAAACA+AGG - Chr2:2201288-2201307 MsG0280006459.01.T03:five_prime_UTR 25.0%
! CAGAATGCTTAACATTATAT+GGG + Chr2:2197939-2197958 None:intergenic 25.0%
! CATATTATAACAAACGCAAA+TGG - Chr2:2201499-2201518 MsG0280006459.01.T03:five_prime_UTR 25.0%
! CTATATGATTTCTCAATGAT+AGG + Chr2:2197653-2197672 None:intergenic 25.0%
! CTATCATTGAGAAATCATAT+AGG - Chr2:2197651-2197670 MsG0280006459.01.T03:intron 25.0%
! GGAACAAAACAATTTCTATA+AGG + Chr2:2196902-2196921 None:intergenic 25.0%
! GGAGACAATAAAAACAATTA+TGG + Chr2:2197185-2197204 None:intergenic 25.0%
! GGAGTTTCAAAAATGAAAAA+AGG - Chr2:2200902-2200921 MsG0280006459.01.T03:five_prime_UTR 25.0%
! TAAAACCAAATTGTGCATAA+GGG - Chr2:2201438-2201457 MsG0280006459.01.T03:five_prime_UTR 25.0%
! TAAGAAGATAAGATCTCAAA+TGG - Chr2:2199652-2199671 MsG0280006459.01.T03:intron 25.0%
! TACCATATGATAGAACATTA+CGG - Chr2:2198510-2198529 MsG0280006459.01.T03:intron 25.0%
! TATTAGTTAGAACTCTAATC+AGG + Chr2:2200156-2200175 None:intergenic 25.0%
! TCAATTCCTTAACGTAAAAA+AGG + Chr2:2200045-2200064 None:intergenic 25.0%
! TCTTATATGGAAACGAATTA+GGG + Chr2:2197251-2197270 None:intergenic 25.0%
! TTAAAACCAAATTGTGCATA+AGG - Chr2:2201437-2201456 MsG0280006459.01.T03:five_prime_UTR 25.0%
! TTACAAACTGATTATTGTGT+TGG + Chr2:2198839-2198858 None:intergenic 25.0%
! TTATACATCATCTTATACGA+TGG + Chr2:2202217-2202236 None:intergenic 25.0%
! TTGTAATACAAAGAAACTGT+TGG + Chr2:2200462-2200481 None:intergenic 25.0%
! TTGTATTTCTTTGACTGAAA+AGG - Chr2:2196491-2196510 MsG0280006459.01.T03:three_prime_UTR 25.0%
!! AAATCCAATGTTTTCTTTTG+AGG + Chr2:2199591-2199610 None:intergenic 25.0%
!! ATGTAGAGAAAAAGCTTTTA+GGG - Chr2:2202127-2202146 MsG0280006459.01.T03:five_prime_UTR 25.0%
!! CAATTAATTTTGCAGACAAA+GGG + Chr2:2199348-2199367 None:intergenic 25.0%
!! CTGTTATCAAAATTTTGCAT+AGG + Chr2:2201271-2201290 None:intergenic 25.0%
!! GTAAGTCATATATTCTAGAA+TGG - Chr2:2199942-2199961 MsG0280006459.01.T03:intron 25.0%
!! TAGATCCAAAAGAATTGTTT+TGG + Chr2:2201762-2201781 None:intergenic 25.0%
!! TATTGTAGACCAAATTTTGA+TGG - Chr2:2196179-2196198 MsG0280006459.01.T03:three_prime_UTR 25.0%
!! TCAATTAATTTTGCAGACAA+AGG + Chr2:2199349-2199368 None:intergenic 25.0%
!! TCTTGAGATATGTCATTTAT+TGG + Chr2:2199210-2199229 None:intergenic 25.0%
!! TCTTTAATATCCCTTTTAAC+TGG - Chr2:2198305-2198324 MsG0280006459.01.T03:CDS 25.0%
!! TCTTTTGCTTAAAGATACAA+AGG + Chr2:2202457-2202476 None:intergenic 25.0%
!! TGAAAAATATCTTTGATGAC+AGG - Chr2:2196981-2197000 MsG0280006459.01.T03:intron 25.0%
!! TGAAATGATTTTCCTTACTT+TGG - Chr2:2197732-2197751 MsG0280006459.01.T03:CDS 25.0%
!! TTCAAGTTTACCATTTAACA+AGG + Chr2:2198210-2198229 None:intergenic 25.0%
!! TTCATAATTTCTGAAAACAG+TGG - Chr2:2196702-2196721 MsG0280006459.01.T03:CDS 25.0%
!! TTTCACTATTTTCACTTGAT+TGG - Chr2:2200253-2200272 MsG0280006459.01.T03:intron 25.0%
!! TTTCTGGTATTCTTTCATTT+GGG + Chr2:2198976-2198995 None:intergenic 25.0%
!! TTTTGTACATAAGTTTTCCA+AGG - Chr2:2196550-2196569 MsG0280006459.01.T03:three_prime_UTR 25.0%
!!! AAATTGTTTTGTTCCTTAGT+TGG - Chr2:2196907-2196926 MsG0280006459.01.T03:CDS 25.0%
!!! AATTGCATTTTGTTTTGATG+TGG - Chr2:2199777-2199796 MsG0280006459.01.T03:intron 25.0%
!!! ATATTGGCTTAATTGCAATT+TGG - Chr2:2195962-2195981 MsG0280006459.01.T03:three_prime_UTR 25.0%
!!! ATGGTTTTATGGTATATTCA+TGG - Chr2:2200115-2200134 MsG0280006459.01.T03:intron 25.0%
!!! ATGTTTTTGTAAACCAAAAG+AGG - Chr2:2201331-2201350 MsG0280006459.01.T03:five_prime_UTR 25.0%
!!! ATTGCATTTTGTTTTGATGT+GGG - Chr2:2199778-2199797 MsG0280006459.01.T03:intron 25.0%
!!! ATTTGAATTTTGGCATGATA+TGG - Chr2:2198355-2198374 MsG0280006459.01.T03:CDS 25.0%
!!! GTGATATGTTTTAAATGACT+TGG - Chr2:2196080-2196099 MsG0280006459.01.T03:three_prime_UTR 25.0%
!!! GTTTTTGTAAGATGGTTTTA+TGG - Chr2:2200104-2200123 MsG0280006459.01.T03:intron 25.0%
!!! TAAAAGCTTTTTCTCTACAT+CGG + Chr2:2202127-2202146 None:intergenic 25.0%
!!! TGTTTTTACTTATATCTCCA+TGG - Chr2:2195755-2195774 MsG0280006459.01.T03:three_prime_UTR 25.0%
!!! TTTTCTGGTATTCTTTCATT+TGG + Chr2:2198977-2198996 None:intergenic 25.0%
!!! TTTTTGGATTGACTTATTTG+AGG - Chr2:2195460-2195479 MsG0280006459.01.T03:intron 25.0%
AAAATTCAAATTGAACCTCG+AGG + Chr2:2198346-2198365 None:intergenic 30.0%
AACATACATTAGCTAAGGAA+AGG + Chr2:2196316-2196335 None:intergenic 30.0%
AATATGCAGACATAAATCAG+CGG - Chr2:2200558-2200577 MsG0280006459.01.T03:five_prime_UTR 30.0%
AATTTATGAGTCCTGCATAA+AGG + Chr2:2200292-2200311 None:intergenic 30.0%
AGAAAACATTGGATTTCTAC+CGG - Chr2:2199595-2199614 MsG0280006459.01.T03:intron 30.0%
AGAAACAGTCTCTAATTAAG+CGG + Chr2:2197689-2197708 None:intergenic 30.0%
AGCACATTACTTATGTAATC+TGG + Chr2:2198730-2198749 None:intergenic 30.0%
AGTAGCATAATCTTATAAGC+AGG - Chr2:2198035-2198054 MsG0280006459.01.T03:CDS 30.0%
ATCCAACTGCAATCAAAAAA+AGG + Chr2:2201416-2201435 None:intergenic 30.0%
ATCTTATCTTCTTATCACCA+GGG + Chr2:2199646-2199665 None:intergenic 30.0%
ATGGAAAACTATCAACATCA+AGG - Chr2:2196117-2196136 MsG0280006459.01.T03:three_prime_UTR 30.0%
ATTAATCTGTCTCGATAACA+AGG - Chr2:2201603-2201622 MsG0280006459.01.T03:five_prime_UTR 30.0%
ATTACTTATGTAATCTGGCA+TGG + Chr2:2198725-2198744 None:intergenic 30.0%
ATTGATGCTATAAAGAGTAG+TGG - Chr2:2198894-2198913 MsG0280006459.01.T03:intron 30.0%
CAGCTTATGAAACTTAAAAC+AGG - Chr2:2196407-2196426 MsG0280006459.01.T03:three_prime_UTR 30.0%
CATTTCAATGAATGTGTTAC+AGG + Chr2:2197719-2197738 None:intergenic 30.0%
CCAATTTGTGACTTTAGATA+TGG - Chr2:2196935-2196954 MsG0280006459.01.T03:CDS 30.0%
CTAATGTATGTTTGTCAAAC+TGG - Chr2:2196324-2196343 MsG0280006459.01.T03:three_prime_UTR 30.0%
GAAAAATGTCATCGTATTTG+TGG + Chr2:2197274-2197293 None:intergenic 30.0%
GAGAAGTGACAACTATAAAA+GGG + Chr2:2197524-2197543 None:intergenic 30.0%
GATGTAGTGTTTGGATAATA+AGG - Chr2:2195332-2195351 MsG0280006459.01.T03:three_prime_UTR 30.0%
GATTCCTCAAAAGAAAACAT+TGG - Chr2:2199584-2199603 MsG0280006459.01.T03:intron 30.0%
GTCTTATATGGAAACGAATT+AGG + Chr2:2197252-2197271 None:intergenic 30.0%
GTGTTACAGTTTGAAGATAA+GGG - Chr2:2198764-2198783 MsG0280006459.01.T03:intron 30.0%
GTGTTTGGATAATAAGGAAA+CGG - Chr2:2195338-2195357 MsG0280006459.01.T03:three_prime_UTR 30.0%
GTTAAGATTGGAATTTCAAG+TGG + Chr2:2197206-2197225 None:intergenic 30.0%
TACTGATATCAGCAGTAAAA+AGG + Chr2:2198596-2198615 None:intergenic 30.0%
TAGTGAAAGTGAAACCAATT+TGG - Chr2:2202159-2202178 MsG0280006459.01.T03:five_prime_UTR 30.0%
TATCTGATGACCAGTTAAAA+GGG + Chr2:2198318-2198337 None:intergenic 30.0%
TCACACTAATAAAATACACC+AGG + Chr2:2200396-2200415 None:intergenic 30.0%
TGAAGTAGAAAGCTATTGTT+TGG - Chr2:2202006-2202025 MsG0280006459.01.T03:five_prime_UTR 30.0%
TGACAAACATACATTAGCTA+AGG + Chr2:2196321-2196340 None:intergenic 30.0%
TGAGAAGTGACAACTATAAA+AGG + Chr2:2197525-2197544 None:intergenic 30.0%
TGATACTAACAGTTCATAAC+CGG + Chr2:2196669-2196688 None:intergenic 30.0%
TGCAATCAAAAAAAGGTGAT+TGG + Chr2:2201409-2201428 None:intergenic 30.0%
TGTGTTACAGTTTGAAGATA+AGG - Chr2:2198763-2198782 MsG0280006459.01.T03:intron 30.0%
TTAGAGCATGACTAAATTCT+AGG + Chr2:2200694-2200713 None:intergenic 30.0%
TTATCTGATGACCAGTTAAA+AGG + Chr2:2198319-2198338 None:intergenic 30.0%
TTCGCAAAATGGTGAAAATA+GGG - Chr2:2196241-2196260 MsG0280006459.01.T03:three_prime_UTR 30.0%
TTGATTAGAACGTAGAAATC+TGG - Chr2:2195307-2195326 MsG0280006459.01.T03:three_prime_UTR 30.0%
TTGTGGTAAAAAATTGACCT+CGG + Chr2:2198383-2198402 None:intergenic 30.0%
TTTCGCAAAATGGTGAAAAT+AGG - Chr2:2196240-2196259 MsG0280006459.01.T03:three_prime_UTR 30.0%
TTTGAGCAAGAAGTGATTAT+TGG + Chr2:2194994-2195013 None:intergenic 30.0%
! AAAGCACTATTCACGAAAAA+TGG + Chr2:2200228-2200247 None:intergenic 30.0%
! AAATTGGTTTCACTTTCACT+AGG + Chr2:2202160-2202179 None:intergenic 30.0%
! AACATTTATGAGGTTGTTTC+AGG - Chr2:2195498-2195517 MsG0280006459.01.T03:intron 30.0%
! AATCGGCAATATTTTCTCAA+GGG + Chr2:2198137-2198156 None:intergenic 30.0%
! ACATTTATGAGGTTGTTTCA+GGG - Chr2:2195499-2195518 MsG0280006459.01.T03:intron 30.0%
! CCATATCTAAAGTCACAAAT+TGG + Chr2:2196938-2196957 None:intergenic 30.0%
! CGTCTATAGTTTTTGTAAGA+TGG - Chr2:2200096-2200115 MsG0280006459.01.T03:intron 30.0%
! CTAGACCAAAACAATTCTTT+TGG - Chr2:2201754-2201773 MsG0280006459.01.T03:five_prime_UTR 30.0%
! GATGTAGAGAAAAAGCTTTT+AGG - Chr2:2202126-2202145 MsG0280006459.01.T03:five_prime_UTR 30.0%
! TAATAAACCTTAGCCTCTTT+TGG + Chr2:2201347-2201366 None:intergenic 30.0%
! TAATCGGCAATATTTTCTCA+AGG + Chr2:2198138-2198157 None:intergenic 30.0%
! TACATTTGTGCTGATCATAA+GGG - Chr2:2202342-2202361 MsG0280006459.01.T03:five_prime_UTR 30.0%
! TATTTGCTTCAAGTGAGTTT+TGG + Chr2:2201093-2201112 None:intergenic 30.0%
! TCGAGGTTCAATTTGAATTT+TGG - Chr2:2198345-2198364 MsG0280006459.01.T03:CDS 30.0%
! TTACATTTGTGCTGATCATA+AGG - Chr2:2202341-2202360 MsG0280006459.01.T03:five_prime_UTR 30.0%
! TTGTCAAACTGGTCTATAAT+TGG - Chr2:2196335-2196354 MsG0280006459.01.T03:three_prime_UTR 30.0%
! TTTTCACCATATCGAGTATT+TGG - Chr2:2195993-2196012 MsG0280006459.01.T03:three_prime_UTR 30.0%
! TTTTCACCATTTTGCGAAAT+TGG + Chr2:2196239-2196258 None:intergenic 30.0%
!! AGAAGCTGTGATTTAACTTT+TGG - Chr2:2199416-2199435 MsG0280006459.01.T03:intron 30.0%
!! ATCGTATTTGTGGTCTTATA+TGG + Chr2:2197264-2197283 None:intergenic 30.0%
!! CTGTGATTTAACTTTTGGAA+TGG - Chr2:2199421-2199440 MsG0280006459.01.T03:intron 30.0%
!! GGGTTGATTTTACGTTTTTA+TGG - Chr2:2198685-2198704 MsG0280006459.01.T03:intron 30.0%
!! TATCCTGAACTTGTTAAGAT+GGG - Chr2:2197355-2197374 MsG0280006459.01.T03:intron 30.0%
!! TCATTTTGAGGGTAATTTGT+TGG - Chr2:2200315-2200334 MsG0280006459.01.T03:intron 30.0%
!! TGAACATTGATAATGAAGCA+GGG + Chr2:2199697-2199716 None:intergenic 30.0%
!! TTATCCTGAACTTGTTAAGA+TGG - Chr2:2197354-2197373 MsG0280006459.01.T03:intron 30.0%
!! TTTCACTTTTCAGCAATAAG+TGG + Chr2:2201385-2201404 None:intergenic 30.0%
!! TTTTTGGTGACAACTTACAA+AGG - Chr2:2195532-2195551 MsG0280006459.01.T03:three_prime_UTR 30.0%
!! TTTTTGTTTGAACCATTGAC+CGG + Chr2:2199617-2199636 None:intergenic 30.0%
!!! CATTTTGAGGGTAATTTGTT+GGG - Chr2:2200316-2200335 MsG0280006459.01.T03:intron 30.0%
!!! CTCAGTTTTCTTGATAATGA+TGG - Chr2:2199240-2199259 MsG0280006459.01.T03:intron 30.0%
!!! GTTTTCTTGATAATGATGGA+TGG - Chr2:2199244-2199263 MsG0280006459.01.T03:intron 30.0%
!!! TCAGGGAACCTTTTTTTTTT+TGG - Chr2:2195516-2195535 MsG0280006459.01.T03:three_prime_UTR 30.0%
!!! TCTCTTCTCATTAGTTTTTG+AGG + Chr2:2200848-2200867 None:intergenic 30.0%
!!! TTTTGAAACTCCTACTTAAG+AGG + Chr2:2200894-2200913 None:intergenic 30.0%
AACAACAACCAAACACTAAG+TGG + Chr2:2198561-2198580 None:intergenic 35.0%
AAGAGCAGCAATATAGATTC+TGG - Chr2:2199108-2199127 MsG0280006459.01.T03:intron 35.0%
AAGGTCATAGTAAAGTTCGA+GGG - Chr2:2200994-2201013 MsG0280006459.01.T03:five_prime_UTR 35.0%
AAGGTTTCTGAATAACCTTG+TGG + Chr2:2198400-2198419 None:intergenic 35.0%
ACAAATGTACATCAGTGTCA+TGG + Chr2:2202293-2202312 None:intergenic 35.0%
ACAACAACCAAACACTAAGT+GGG + Chr2:2198560-2198579 None:intergenic 35.0%
ACAATGCAAGTTTGATTGCA+AGG - Chr2:2200351-2200370 MsG0280006459.01.T03:intron 35.0%
ACTCGATATGGTGAAAATAG+TGG + Chr2:2195990-2196009 None:intergenic 35.0%
AGGCAAACTTCAGATAATAC+AGG - Chr2:2199066-2199085 MsG0280006459.01.T03:intron 35.0%
AGGTCGTCTAAAAGAATTTG+AGG + Chr2:2197633-2197652 None:intergenic 35.0%
AGTGAATCAGACACAAAATC+TGG - Chr2:2199716-2199735 MsG0280006459.01.T03:intron 35.0%
ATAGTTCTCATGGTCATTCT+TGG - Chr2:2200813-2200832 MsG0280006459.01.T03:five_prime_UTR 35.0%
ATCTGGTCATAAAGATGTCT+TGG - Chr2:2199733-2199752 MsG0280006459.01.T03:intron 35.0%
ATGAGAACTATCCATGTTTG+AGG + Chr2:2200804-2200823 None:intergenic 35.0%
ATGTACATAGAAATGCTCAC+TGG + Chr2:2197792-2197811 None:intergenic 35.0%
CAATGCAAGTTTGATTGCAA+GGG - Chr2:2200352-2200371 MsG0280006459.01.T03:intron 35.0%
CACCACTAATGATACATTCA+AGG + Chr2:2197037-2197056 None:intergenic 35.0%
CACCTGACACACAATATAAT+TGG - Chr2:2196848-2196867 MsG0280006459.01.T03:CDS 35.0%
CAGAACTCATCCTTGTTAAA+TGG - Chr2:2198197-2198216 MsG0280006459.01.T03:CDS 35.0%
CAGATGTTTGACATTCATCT+CGG + Chr2:2197070-2197089 None:intergenic 35.0%
CCAACACAAATCCTATTGAT+CGG - Chr2:2201865-2201884 MsG0280006459.01.T03:five_prime_UTR 35.0%
CTCGATATGGTGAAAATAGT+GGG + Chr2:2195989-2196008 None:intergenic 35.0%
CTTGAATGTATCATTAGTGG+TGG - Chr2:2197035-2197054 MsG0280006459.01.T03:intron 35.0%
GAAAATTCTGCCAAATTGGA+GGG + Chr2:2199316-2199335 None:intergenic 35.0%
GAAACAGTCTCTAATTAAGC+GGG + Chr2:2197688-2197707 None:intergenic 35.0%
GAATACCAGAAAAAGGTTCA+TGG - Chr2:2198984-2199003 MsG0280006459.01.T03:intron 35.0%
GATAACACATAGCTTCATTC+AGG - Chr2:2201817-2201836 MsG0280006459.01.T03:five_prime_UTR 35.0%
GATAAGATCTCAAATGGATG+TGG - Chr2:2199658-2199677 MsG0280006459.01.T03:intron 35.0%
GATCTTATCTTCTTATCACC+AGG + Chr2:2199647-2199666 None:intergenic 35.0%
GCTAAATATATGGCATCACA+GGG + Chr2:2197761-2197780 None:intergenic 35.0%
GGTGCTTTATGAGTATATTG+TGG + Chr2:2197164-2197183 None:intergenic 35.0%
GGTTCTTTATGAAAACCACA+AGG - Chr2:2199846-2199865 MsG0280006459.01.T03:intron 35.0%
GTCAAACATCTGTATGTTTG+AGG - Chr2:2197078-2197097 MsG0280006459.01.T03:intron 35.0%
GTCAGTTAAACCAGAAAATG+AGG + Chr2:2202038-2202057 None:intergenic 35.0%
GTGAAGCTATATTTCGATGT+GGG - Chr2:2199825-2199844 MsG0280006459.01.T03:intron 35.0%
TAAATGTCTCAAACCCAAAC+TGG - Chr2:2197390-2197409 MsG0280006459.01.T03:intron 35.0%
TAACAAGGTTACTCCAGTTT+GGG + Chr2:2197406-2197425 None:intergenic 35.0%
TACAGTTTGAAGATAAGGGT+GGG - Chr2:2198768-2198787 MsG0280006459.01.T03:intron 35.0%
TAGCACACTTATTGTTTCAC+AGG - Chr2:2201892-2201911 MsG0280006459.01.T03:five_prime_UTR 35.0%
TATAATTGCAACGGTAGTGA+CGG - Chr2:2196466-2196485 MsG0280006459.01.T03:three_prime_UTR 35.0%
TATATGACTTACGAGATCAG+AGG + Chr2:2199934-2199953 None:intergenic 35.0%
TCAAACATGGATAGTTCTCA+TGG - Chr2:2200803-2200822 MsG0280006459.01.T03:five_prime_UTR 35.0%
TCTTATCTTCTTATCACCAG+GGG + Chr2:2199645-2199664 None:intergenic 35.0%
TGAACTGTTAGTATCATCGA+TGG - Chr2:2196673-2196692 MsG0280006459.01.T03:CDS 35.0%
TGAGCAAGATAGGAAAAAAG+TGG + Chr2:2198278-2198297 None:intergenic 35.0%
TGCATAATGAAGCTCTATGT+CGG + Chr2:2199525-2199544 None:intergenic 35.0%
TGCCAATTATATTGTGTGTC+AGG + Chr2:2196853-2196872 None:intergenic 35.0%
TGTACATAGAAATGCTCACT+GGG + Chr2:2197791-2197810 None:intergenic 35.0%
TGTGAAGCTATATTTCGATG+TGG - Chr2:2199824-2199843 MsG0280006459.01.T03:intron 35.0%
TTAAACCAGAAAATGAGGCT+AGG + Chr2:2202033-2202052 None:intergenic 35.0%
TTACAGTTTGAAGATAAGGG+TGG - Chr2:2198767-2198786 MsG0280006459.01.T03:intron 35.0%
TTGTAAACCAAAAGAGGCTA+AGG - Chr2:2201337-2201356 MsG0280006459.01.T03:five_prime_UTR 35.0%
TTGTAAGAAACCCTCCAATT+TGG - Chr2:2199303-2199322 MsG0280006459.01.T03:CDS 35.0%
TTTATGTCTGCATATTGCTC+AGG + Chr2:2200554-2200573 None:intergenic 35.0%
TTTGTCTTATGCCTCAAACA+TGG - Chr2:2200790-2200809 MsG0280006459.01.T03:five_prime_UTR 35.0%
! AAAATATTGCCGATTAGTGG+TGG - Chr2:2198142-2198161 MsG0280006459.01.T03:intron 35.0%
! AACTGGTCTATAATTGGTGA+AGG - Chr2:2196341-2196360 MsG0280006459.01.T03:three_prime_UTR 35.0%
! AATCTGGTTGATGTAGTGTT+TGG - Chr2:2195323-2195342 MsG0280006459.01.T03:three_prime_UTR 35.0%
! AATTGGTGAAGGTTTTTACC+AGG - Chr2:2196352-2196371 MsG0280006459.01.T03:three_prime_UTR 35.0%
! ATACTGCTGAGTGTACTTTT+AGG - Chr2:2200185-2200204 MsG0280006459.01.T03:intron 35.0%
! ATTTTGTCATGTGCCTTTGA+GGG + Chr2:2199897-2199916 None:intergenic 35.0%
! CATTTTTCTTGAGTCACCTT+TGG - Chr2:2197286-2197305 MsG0280006459.01.T03:intron 35.0%
! GAGAAAATATTGCCGATTAG+TGG - Chr2:2198139-2198158 MsG0280006459.01.T03:intron 35.0%
! TAATGCTTGGTAGCATATCT+TGG - Chr2:2197886-2197905 MsG0280006459.01.T03:CDS 35.0%
! TACTGCTGAGTGTACTTTTA+GGG - Chr2:2200186-2200205 MsG0280006459.01.T03:intron 35.0%
! TATTTTGTCATGTGCCTTTG+AGG + Chr2:2199898-2199917 None:intergenic 35.0%
! TTAATTACTACGCGCGTTTT+TGG - Chr2:2195444-2195463 MsG0280006459.01.T03:intron 35.0%
! TTCTTGCTCAAATCACGTTT+TGG - Chr2:2195002-2195021 MsG0280006459.01.T03:three_prime_UTR 35.0%
! TTGAAAGGTGCAATATCGTT+TGG + Chr2:2201942-2201961 None:intergenic 35.0%
! TTTTCCTATCTTGCTCAAGT+CGG - Chr2:2198281-2198300 MsG0280006459.01.T03:CDS 35.0%
!! ATCCTGAACTTGTTAAGATG+GGG - Chr2:2197356-2197375 MsG0280006459.01.T03:intron 35.0%
!! ATTCTAGAATGGGATTCAAC+CGG - Chr2:2199953-2199972 MsG0280006459.01.T03:intron 35.0%
!! ATTGTGTTGGCTACTAGAAT+GGG + Chr2:2198826-2198845 None:intergenic 35.0%
!! CTGAACATTGATAATGAAGC+AGG + Chr2:2199698-2199717 None:intergenic 35.0%
!! GAAATGCTATTTCACAGTCA+AGG - Chr2:2200931-2200950 MsG0280006459.01.T03:five_prime_UTR 35.0%
!! GTAGACCAAATTTTGATGGA+GGG - Chr2:2196183-2196202 MsG0280006459.01.T03:three_prime_UTR 35.0%
!! TATTGTGTTGGCTACTAGAA+TGG + Chr2:2198827-2198846 None:intergenic 35.0%
!! TGTAGACCAAATTTTGATGG+AGG - Chr2:2196182-2196201 MsG0280006459.01.T03:three_prime_UTR 35.0%
!!! AGCTTTTTTTTCGCGTTGTT+TGG + Chr2:2194970-2194989 None:intergenic 35.0%
!!! CACCTTTTTTTGATTGCAGT+TGG - Chr2:2201411-2201430 MsG0280006459.01.T03:five_prime_UTR 35.0%
!!! GAGGTCAATTTTTTACCACA+AGG - Chr2:2198382-2198401 MsG0280006459.01.T03:CDS 35.0%
!!! GCTTTTTTTTCGCGTTGTTT+GGG + Chr2:2194969-2194988 None:intergenic 35.0%
AAGGGACCAATTTCGCAAAA+TGG - Chr2:2196230-2196249 MsG0280006459.01.T03:three_prime_UTR 40.0%
ACAAACGCAAATGGTTGCAT+TGG - Chr2:2201508-2201527 MsG0280006459.01.T03:five_prime_UTR 40.0%
ACAGTTTGAAGATAAGGGTG+GGG - Chr2:2198769-2198788 MsG0280006459.01.T03:intron 40.0%
ACCTTTCAAATCCAATGCAG+CGG - Chr2:2201953-2201972 MsG0280006459.01.T03:five_prime_UTR 40.0%
ACTGTCCCTTATGCACAATT+TGG + Chr2:2201446-2201465 None:intergenic 40.0%
AGAAGTAACACCACTAGAAG+AGG + Chr2:2200591-2200610 None:intergenic 40.0%
AGCAGCAATATAGATTCTGG+TGG - Chr2:2199111-2199130 MsG0280006459.01.T03:intron 40.0%
AGGTCATAGTAAAGTTCGAG+GGG - Chr2:2200995-2201014 MsG0280006459.01.T03:five_prime_UTR 40.0%
AGGTTATTCAGAAACCTTGC+AGG - Chr2:2198402-2198421 MsG0280006459.01.T03:intron 40.0%
ATAATGAAGAGGAGTTCTGC+TGG - Chr2:2199453-2199472 MsG0280006459.01.T03:intron 40.0%
ATAGCTTCATTCAGGTGTAC+AGG - Chr2:2201825-2201844 MsG0280006459.01.T03:five_prime_UTR 40.0%
ATATGGAAACGAATTAGGGC+CGG + Chr2:2197247-2197266 None:intergenic 40.0%
ATGAAAACATACCGCTGCAT+TGG + Chr2:2201967-2201986 None:intergenic 40.0%
ATTGGATTTCTACCGGTCAA+TGG - Chr2:2199602-2199621 MsG0280006459.01.T03:intron 40.0%
ATTGTGCTTGACCTTTATGC+AGG - Chr2:2200278-2200297 MsG0280006459.01.T03:intron 40.0%
CAAATTGGAAACGCCAACTA+AGG + Chr2:2196923-2196942 None:intergenic 40.0%
CAACAACCAAACACTAAGTG+GGG + Chr2:2198559-2198578 None:intergenic 40.0%
CACATACTTGCCTTCAAAGA+TGG + Chr2:2199160-2199179 None:intergenic 40.0%
CAGTTTGTAATAGAGGGTGA+TGG - Chr2:2198849-2198868 MsG0280006459.01.T03:intron 40.0%
CATGGCATTCAATGCAAAAC+TGG + Chr2:2202275-2202294 None:intergenic 40.0%
CATTGTGTTAAAGTAGAGCC+TGG + Chr2:2196373-2196392 None:intergenic 40.0%
CCGATCAATAGGATTTGTGT+TGG + Chr2:2201868-2201887 None:intergenic 40.0%
CGCCGTAATGTTCTATCATA+TGG + Chr2:2198515-2198534 None:intergenic 40.0%
CGCCTTGAATGTATCATTAG+TGG - Chr2:2197032-2197051 MsG0280006459.01.T03:intron 40.0%
CGCTAAATATATGGCATCAC+AGG + Chr2:2197762-2197781 None:intergenic 40.0%
CTAAATTCTAGGTGCGTTGA+AGG + Chr2:2200683-2200702 None:intergenic 40.0%
CTATGTTCTGCTTATGCTTC+TGG + Chr2:2200625-2200644 None:intergenic 40.0%
CTTGGTATATGATGCGATGA+TGG - Chr2:2196098-2196117 MsG0280006459.01.T03:three_prime_UTR 40.0%
CTTGTTACCTTGTGATCTCA+CGG - Chr2:2197419-2197438 MsG0280006459.01.T03:intron 40.0%
CTTTACAACACAGCTCTGTT+TGG + Chr2:2195647-2195666 None:intergenic 40.0%
GAAACTTAGACGATGTTGAC+AGG - Chr2:2199277-2199296 MsG0280006459.01.T03:CDS 40.0%
GAAGGTCATAGTAAAGTTCG+AGG - Chr2:2200993-2201012 MsG0280006459.01.T03:five_prime_UTR 40.0%
GACTCATACAGAGAAGCAAA+AGG - Chr2:2199046-2199065 MsG0280006459.01.T03:intron 40.0%
GCAGATGATACCATCTTTGA+AGG - Chr2:2199147-2199166 MsG0280006459.01.T03:intron 40.0%
GCTATCCTATTGCTAATGCT+TGG - Chr2:2197873-2197892 MsG0280006459.01.T03:CDS 40.0%
GGAAAATTCTGCCAAATTGG+AGG + Chr2:2199317-2199336 None:intergenic 40.0%
GGAAATTTGTATGAGCCTTG+TGG + Chr2:2199864-2199883 None:intergenic 40.0%
GGAGAGTCTCAATAATGAAG+AGG - Chr2:2199442-2199461 MsG0280006459.01.T03:intron 40.0%
GGATTAAGAGCTGAACATGA+CGG - Chr2:2200743-2200762 MsG0280006459.01.T03:five_prime_UTR 40.0%
GGGGAACAACGCTAAATATA+TGG + Chr2:2197771-2197790 None:intergenic 40.0%
GGTTATTCAGAAACCTTGCA+GGG - Chr2:2198403-2198422 MsG0280006459.01.T03:intron 40.0%
GTAACAAGGTTACTCCAGTT+TGG + Chr2:2197407-2197426 None:intergenic 40.0%
GTACATAGAAATGCTCACTG+GGG + Chr2:2197790-2197809 None:intergenic 40.0%
GTCACTACCGTTGCAATTAT+AGG + Chr2:2196467-2196486 None:intergenic 40.0%
GTTCTGCATCGTGTTAAGAT+TGG + Chr2:2197218-2197237 None:intergenic 40.0%
TACTAACAGTTCATAACCGG+CGG + Chr2:2196666-2196685 None:intergenic 40.0%
TCAAACAAAAAGTCATCCCC+TGG - Chr2:2199626-2199645 MsG0280006459.01.T03:intron 40.0%
TCAGCAGGAAAGCGAAAAAA+TGG - Chr2:2200503-2200522 MsG0280006459.01.T03:five_prime_UTR 40.0%
TCATCAGATAAACTTCCTCG+AGG - Chr2:2198328-2198347 MsG0280006459.01.T03:CDS 40.0%
TCCATATGATGATCCCTCAA+AGG - Chr2:2199881-2199900 MsG0280006459.01.T03:intron 40.0%
TCCTACTTAAGAGGTGATCA+TGG + Chr2:2200885-2200904 None:intergenic 40.0%
TCCTTAACGTAAAAAAGGGG+TGG + Chr2:2200040-2200059 None:intergenic 40.0%
TCGTTTGGAAGCAAAGTTGA+TGG + Chr2:2201927-2201946 None:intergenic 40.0%
TCTATTAACCAGTGTGACCT+TGG + Chr2:2196570-2196589 None:intergenic 40.0%
TCTTATTCCGTGAGATCACA+AGG + Chr2:2197429-2197448 None:intergenic 40.0%
TGCACAAACTTGAACATCAC+AGG + Chr2:2201158-2201177 None:intergenic 40.0%
TGCTACCAAGCATTAGCAAT+AGG + Chr2:2197881-2197900 None:intergenic 40.0%
TGGGGAAAATTCTGCCAAAT+TGG + Chr2:2199320-2199339 None:intergenic 40.0%
TGTGCTATAGACCGATCAAT+AGG + Chr2:2201879-2201898 None:intergenic 40.0%
TGTTGCAAGCAAAGAGTAGA+AGG + Chr2:2198252-2198271 None:intergenic 40.0%
TTAACGTAAAAAAGGGGTGG+AGG + Chr2:2200037-2200056 None:intergenic 40.0%
TTGCAGACAAAGGGAAAGAT+GGG + Chr2:2199339-2199358 None:intergenic 40.0%
TTGGTCCCTCCATCAAAATT+TGG + Chr2:2196191-2196210 None:intergenic 40.0%
TTTGCAGACAAAGGGAAAGA+TGG + Chr2:2199340-2199359 None:intergenic 40.0%
! ACACTGGTTAATAGAGATCG+TGG - Chr2:2196575-2196594 MsG0280006459.01.T03:exon 40.0%
! AGGTGCTACAGATCTAATAG+CGG + Chr2:2196833-2196852 None:intergenic 40.0%
! CACTGGTTAATAGAGATCGT+GGG - Chr2:2196576-2196595 MsG0280006459.01.T03:exon 40.0%
! CATCTTTGAAGGCAAGTATG+TGG - Chr2:2199158-2199177 MsG0280006459.01.T03:intron 40.0%
! GGTGTATTTTCGTCATGTGA+TGG - Chr2:2199022-2199041 MsG0280006459.01.T03:intron 40.0%
! GGTTTGAGACATTTACTGAC+TGG + Chr2:2197385-2197404 None:intergenic 40.0%
! TAAGTTTTCCAAGGTCACAC+TGG - Chr2:2196559-2196578 MsG0280006459.01.T03:three_prime_UTR 40.0%
! TATTGCTCAGGAGGAGTATA+AGG + Chr2:2200542-2200561 None:intergenic 40.0%
! TCAGACCATGAACCTTTTTC+TGG + Chr2:2198992-2199011 None:intergenic 40.0%
!! AATGATGGATGGCTGGATAT+AGG - Chr2:2199255-2199274 MsG0280006459.01.T03:intron 40.0%
!! AGCAAAGTTGATGGATCTGT+CGG + Chr2:2201918-2201937 None:intergenic 40.0%
!! TCTAGTGGTGTTACTTCTCT+TGG - Chr2:2200593-2200612 MsG0280006459.01.T03:five_prime_UTR 40.0%
!! TCTTGATAATGATGGATGGC+TGG - Chr2:2199248-2199267 MsG0280006459.01.T03:intron 40.0%
!! TTGTGTTGGCTACTAGAATG+GGG + Chr2:2198825-2198844 None:intergenic 40.0%
!! TTTTTCGCGTTGTTTGGGAT+GGG + Chr2:2194964-2194983 None:intergenic 40.0%
!!! TCCACCCCTTTTTTACGTTA+AGG - Chr2:2200036-2200055 MsG0280006459.01.T03:intron 40.0%
!!! TGCTGGTTTTCTTCTTCACA+TGG - Chr2:2199470-2199489 MsG0280006459.01.T03:intron 40.0%
!!! TTTTTTCGCGTTGTTTGGGA+TGG + Chr2:2194965-2194984 None:intergenic 40.0%
AAACCAGGTTCAACGTGCTA+GGG - Chr2:2198067-2198086 MsG0280006459.01.T03:intron 45.0%
AACCAAACACTAAGTGGGGT+CGG + Chr2:2198555-2198574 None:intergenic 45.0%
AAGCTTCCAAAGTCATCAGC+AGG - Chr2:2200488-2200507 MsG0280006459.01.T03:five_prime_UTR 45.0%
ACCGCTGCATTGGATTTGAA+AGG + Chr2:2201957-2201976 None:intergenic 45.0%
ACTGCTGATATCAGTAGCAG+TGG - Chr2:2198600-2198619 MsG0280006459.01.T03:intron 45.0%
ATCACAGGGATGCCAAAGTA+AGG + Chr2:2197747-2197766 None:intergenic 45.0%
ATCAGCAAGCAATCCAGGAA+AGG - Chr2:2202068-2202087 MsG0280006459.01.T03:five_prime_UTR 45.0%
ATGTCTGCATATTGCTCAGG+AGG + Chr2:2200551-2200570 None:intergenic 45.0%
CACAGCATGATGTGCCAAAT+TGG + Chr2:2202176-2202195 None:intergenic 45.0%
CACGATGCAGAACATACAAC+CGG - Chr2:2197225-2197244 MsG0280006459.01.T03:intron 45.0%
CATGAATCAGCAAGCAATCC+AGG - Chr2:2202063-2202082 MsG0280006459.01.T03:five_prime_UTR 45.0%
CATGACGAAAATACACCCTC+AGG + Chr2:2199019-2199038 None:intergenic 45.0%
CGTGAGATCACAAGGTAACA+AGG + Chr2:2197421-2197440 None:intergenic 45.0%
CTATGATCACACTCAGAGAC+CGG + Chr2:2199975-2199994 None:intergenic 45.0%
CTATGGAACTCTCGGTAAAG+AGG - Chr2:2198929-2198948 MsG0280006459.01.T03:intron 45.0%
CTGCTGATATCAGTAGCAGT+GGG - Chr2:2198601-2198620 MsG0280006459.01.T03:intron 45.0%
GACCCCATCTTAACAAGTTC+AGG + Chr2:2197361-2197380 None:intergenic 45.0%
GCAAATGGTTGCATTGGAGA+TGG - Chr2:2201514-2201533 MsG0280006459.01.T03:five_prime_UTR 45.0%
GCAAGCAAAGAGTAGAAGGA+AGG + Chr2:2198248-2198267 None:intergenic 45.0%
GCAAGTTTGATTGCAAGGGT+GGG - Chr2:2200356-2200375 MsG0280006459.01.T03:intron 45.0%
GCCATGATCACCTCTTAAGT+AGG - Chr2:2200881-2200900 MsG0280006459.01.T03:five_prime_UTR 45.0%
GCTCAGCACTCTTAGCTAAA+CGG + Chr2:2201474-2201493 None:intergenic 45.0%
GGCTGAGAATCAGTTCTTTC+AGG - Chr2:2202089-2202108 MsG0280006459.01.T03:five_prime_UTR 45.0%
GGGAGACCAAATACTCGATA+TGG + Chr2:2196002-2196021 None:intergenic 45.0%
GTTCTCATGGTCATTCTTGG+TGG - Chr2:2200816-2200835 MsG0280006459.01.T03:five_prime_UTR 45.0%
TAAAGTTCGAGGGGTAGTCT+AGG - Chr2:2201004-2201023 MsG0280006459.01.T03:five_prime_UTR 45.0%
TAACCACAAGAATTCACCGC+CGG - Chr2:2196647-2196666 MsG0280006459.01.T03:CDS 45.0%
TATTGGCACGAAACAAGCCA+TGG + Chr2:2195775-2195794 None:intergenic 45.0%
TCACTCTCTTCGACTTTCTC+TGG - Chr2:2200722-2200741 MsG0280006459.01.T03:five_prime_UTR 45.0%
TCAGCTACACCACCACTAAT+CGG + Chr2:2198154-2198173 None:intergenic 45.0%
TGAAGCATGCAGAGACACAA+TGG - Chr2:2201540-2201559 MsG0280006459.01.T03:five_prime_UTR 45.0%
TGCAAGTTTGATTGCAAGGG+TGG - Chr2:2200355-2200374 MsG0280006459.01.T03:intron 45.0%
TGCAGACAAAGGGAAAGATG+GGG + Chr2:2199338-2199357 None:intergenic 45.0%
TGGTCCAGAGAAGAGCTTAT+GGG + Chr2:2201073-2201092 None:intergenic 45.0%
TGTATGAGAGCAGAGTCCAA+AGG + Chr2:2197305-2197324 None:intergenic 45.0%
TGTCTCGATAACAAGGTAGC+TGG - Chr2:2201610-2201629 MsG0280006459.01.T03:five_prime_UTR 45.0%
TTGGTCCAGAGAAGAGCTTA+TGG + Chr2:2201074-2201093 None:intergenic 45.0%
TTTGGCATGATATGGTTCCG+AGG - Chr2:2198363-2198382 MsG0280006459.01.T03:CDS 45.0%
! AACTGATTCTCAGCCTTTCC+TGG + Chr2:2202084-2202103 None:intergenic 45.0%
! CTTTGAAGGCAAGTATGTGG+TGG - Chr2:2199161-2199180 MsG0280006459.01.T03:intron 45.0%
! GAGGGAAATTTTACCCTGCA+AGG + Chr2:2198419-2198438 None:intergenic 45.0%
! GCCTTTGAGGGATCATCATA+TGG + Chr2:2199885-2199904 None:intergenic 45.0%
! TCTTCTTCACATGGTGCTGA+GGG - Chr2:2199479-2199498 MsG0280006459.01.T03:intron 45.0%
! TTCTTCTTCACATGGTGCTG+AGG - Chr2:2199478-2199497 MsG0280006459.01.T03:intron 45.0%
! TTGGTCCTAGCCTCATTTTC+TGG - Chr2:2202025-2202044 MsG0280006459.01.T03:five_prime_UTR 45.0%
!! AGAACCGACTTGAGCAAGAT+AGG + Chr2:2198288-2198307 None:intergenic 45.0%
!! CTCTGAAGCCACTTTACAAC+AGG + Chr2:2201636-2201655 None:intergenic 45.0%
!! TGGGTTAGTTTCTGAATGCC+TGG - Chr2:2200375-2200394 MsG0280006459.01.T03:intron 45.0%
!! TGTCTTGGTGCCGAAAGAAA+AGG - Chr2:2199748-2199767 MsG0280006459.01.T03:intron 45.0%
AATCCCTAGCACGTTGAACC+TGG + Chr2:2198073-2198092 None:intergenic 50.0%
ACGTGCTAGGGATTCAGAAG+TGG - Chr2:2198079-2198098 MsG0280006459.01.T03:intron 50.0%
AGCAGGCTGTTGTTCAAACC+AGG - Chr2:2198052-2198071 MsG0280006459.01.T03:intron 50.0%
ATGCAGAGACACAATGGCTC+AGG - Chr2:2201546-2201565 MsG0280006459.01.T03:five_prime_UTR 50.0%
CAAACCAGGTTCAACGTGCT+AGG - Chr2:2198066-2198085 MsG0280006459.01.T03:intron 50.0%
CAATGGCTCAGGATACAAGC+AGG - Chr2:2201557-2201576 MsG0280006459.01.T03:five_prime_UTR 50.0%
CAGTCAAGGTTCTTCTCAGC+AGG - Chr2:2200945-2200964 MsG0280006459.01.T03:five_prime_UTR 50.0%
CATTGAGCAGTGTGTTGAGC+TGG - Chr2:2197832-2197851 MsG0280006459.01.T03:CDS 50.0%
CCAAAATCTTGTGCAGCTGG+TGG - Chr2:2202420-2202439 MsG0280006459.01.T03:five_prime_UTR 50.0%
CCACCAAAATCTTGTGCAGC+TGG - Chr2:2202417-2202436 MsG0280006459.01.T03:five_prime_UTR 50.0%
CGCTTTCCTGCTGATGACTT+TGG + Chr2:2200497-2200516 None:intergenic 50.0%
CTAGGGATTCAGAAGTGGCT+TGG - Chr2:2198084-2198103 MsG0280006459.01.T03:intron 50.0%
CTCACCCATAAGCTCTTCTC+TGG - Chr2:2201066-2201085 MsG0280006459.01.T03:five_prime_UTR 50.0%
GCAGACATAAATCAGCGGTG+TGG - Chr2:2200563-2200582 MsG0280006459.01.T03:five_prime_UTR 50.0%
GGCGGTGAATTCTTGTGGTT+AGG + Chr2:2196648-2196667 None:intergenic 50.0%
GGCTACTAGAATGGGGAACT+TGG + Chr2:2198818-2198837 None:intergenic 50.0%
TAACCGGCGGTGAATTCTTG+TGG + Chr2:2196653-2196672 None:intergenic 50.0%
TCATGGTCTGACACACCTGA+GGG - Chr2:2199001-2199020 MsG0280006459.01.T03:intron 50.0%
TTCATGGTCTGACACACCTG+AGG - Chr2:2199000-2199019 MsG0280006459.01.T03:intron 50.0%
TTTCTCAAGGGCAGTGTGTC+TGG + Chr2:2198125-2198144 None:intergenic 50.0%
! CCACCAGCTGCACAAGATTT+TGG + Chr2:2202423-2202442 None:intergenic 50.0%
! CCAGCTGCACAAGATTTTGG+TGG + Chr2:2202420-2202439 None:intergenic 50.0%
! GTAGCTGGCCTGTTGTAAAG+TGG - Chr2:2201625-2201644 MsG0280006459.01.T03:five_prime_UTR 50.0%
! TAGCTTTTGCCACCTGCAAC+AGG - Chr2:2201111-2201130 MsG0280006459.01.T03:five_prime_UTR 50.0%
ACTAAGTGGGGTCGGCTACA+TGG + Chr2:2198547-2198566 None:intergenic 55.0%
AGCCGACCCCACTTAGTGTT+TGG - Chr2:2198550-2198569 MsG0280006459.01.T03:intron 55.0%
CCTGTTCCAACACCTGTTGC+AGG + Chr2:2201126-2201145 None:intergenic 55.0%
GTTCCAACACCTGTTGCAGG+TGG + Chr2:2201123-2201142 None:intergenic 55.0%
TGAGCAGTGTGTTGAGCTGG+AGG - Chr2:2197835-2197854 MsG0280006459.01.T03:CDS 55.0%
TTGCCACCTGCAACAGGTGT+TGG - Chr2:2201117-2201136 MsG0280006459.01.T03:five_prime_UTR 55.0%
!! CCTGCAACAGGTGTTGGAAC+AGG - Chr2:2201123-2201142 MsG0280006459.01.T03:five_prime_UTR 55.0%
CGGTGTGGAGCCTCTTCTAG+TGG - Chr2:2200578-2200597 MsG0280006459.01.T03:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 2194926 2202554 2194926 ID=MsG0280006459.01;Name=MsG0280006459.01
Chr2 mRNA 2194926 2202554 2194926 ID=MsG0280006459.01.T01;Parent=MsG0280006459.01;Name=MsG0280006459.01.T01;_AED=0.48;_eAED=0.48;_QI=171|0.75|0.88|1|0.5|0.44|9|1026|386
Chr2 exon 2200381 2200477 2200381 ID=MsG0280006459.01.T01:exon:338;Parent=MsG0280006459.01.T01
Chr2 exon 2202457 2202554 2202457 ID=MsG0280006459.01.T01:exon:337;Parent=MsG0280006459.01.T01
Chr2 five_prime_UTR 2202457 2202554 2202457 ID=MsG0280006459.01.T01:five_prime_utr;Parent=MsG0280006459.01.T01
Chr2 five_prime_UTR 2200405 2200477 2200405 ID=MsG0280006459.01.T01:five_prime_utr;Parent=MsG0280006459.01.T01
Chr2 CDS 2200381 2200404 2200381 ID=MsG0280006459.01.T01:cds;Parent=MsG0280006459.01.T01
Chr2 CDS 2199262 2199392 2199262 ID=MsG0280006459.01.T01:cds;Parent=MsG0280006459.01.T01
Chr2 CDS 2198176 2198418 2198176 ID=MsG0280006459.01.T01:cds;Parent=MsG0280006459.01.T01
Chr2 CDS 2197711 2198062 2197711 ID=MsG0280006459.01.T01:cds;Parent=MsG0280006459.01.T01
Chr2 CDS 2196582 2196992 2196582 ID=MsG0280006459.01.T01:cds;Parent=MsG0280006459.01.T01
Chr2 three_prime_UTR 2196336 2196581 2196336 ID=MsG0280006459.01.T01:three_prime_utr;Parent=MsG0280006459.01.T01
Chr2 three_prime_UTR 2195902 2196050 2195902 ID=MsG0280006459.01.T01:three_prime_utr;Parent=MsG0280006459.01.T01
Chr2 three_prime_UTR 2195506 2195641 2195506 ID=MsG0280006459.01.T01:three_prime_utr;Parent=MsG0280006459.01.T01
Chr2 three_prime_UTR 2194926 2195420 2194926 ID=MsG0280006459.01.T01:three_prime_utr;Parent=MsG0280006459.01.T01
Chr2 mRNA 2194926 2202554 2194926 ID=MsG0280006459.01.T02;Parent=MsG0280006459.01;Name=MsG0280006459.01.T02;_AED=0.46;_eAED=0.46;_QI=2150|0.71|0.87|1|0.57|0.5|8|1026|386
Chr2 five_prime_UTR 2200405 2202554 2200405 ID=MsG0280006459.01.T02:five_prime_utr;Parent=MsG0280006459.01.T02
Chr2 CDS 2200381 2200404 2200381 ID=MsG0280006459.01.T02:cds;Parent=MsG0280006459.01.T02
Chr2 CDS 2199262 2199392 2199262 ID=MsG0280006459.01.T02:cds;Parent=MsG0280006459.01.T02
Chr2 CDS 2198176 2198418 2198176 ID=MsG0280006459.01.T02:cds;Parent=MsG0280006459.01.T02
Chr2 CDS 2197711 2198062 2197711 ID=MsG0280006459.01.T02:cds;Parent=MsG0280006459.01.T02
Chr2 CDS 2196582 2196992 2196582 ID=MsG0280006459.01.T02:cds;Parent=MsG0280006459.01.T02
Chr2 three_prime_UTR 2196336 2196581 2196336 ID=MsG0280006459.01.T02:three_prime_utr;Parent=MsG0280006459.01.T02
Chr2 three_prime_UTR 2195902 2196050 2195902 ID=MsG0280006459.01.T02:three_prime_utr;Parent=MsG0280006459.01.T02
Chr2 three_prime_UTR 2195506 2195641 2195506 ID=MsG0280006459.01.T02:three_prime_utr;Parent=MsG0280006459.01.T02
Chr2 three_prime_UTR 2194926 2195420 2194926 ID=MsG0280006459.01.T02:three_prime_utr;Parent=MsG0280006459.01.T02
Chr2 mRNA 2194926 2202554 2194926 ID=MsG0280006459.01.T03;Parent=MsG0280006459.01;Name=MsG0280006459.01.T03;_AED=0.45;_eAED=0.45;_QI=2150|0.6|0.83|1|0.6|0.33|6|1571|386
Chr2 exon 2195506 2196992 2195506 ID=MsG0280006459.01.T03:exon:347;Parent=MsG0280006459.01.T03
Chr2 five_prime_UTR 2200405 2202554 2200405 ID=MsG0280006459.01.T03:five_prime_utr;Parent=MsG0280006459.01.T03
Chr2 CDS 2200381 2200404 2200381 ID=MsG0280006459.01.T03:cds;Parent=MsG0280006459.01.T03
Chr2 CDS 2199262 2199392 2199262 ID=MsG0280006459.01.T03:cds;Parent=MsG0280006459.01.T03
Chr2 CDS 2198176 2198418 2198176 ID=MsG0280006459.01.T03:cds;Parent=MsG0280006459.01.T03
Chr2 CDS 2197711 2198062 2197711 ID=MsG0280006459.01.T03:cds;Parent=MsG0280006459.01.T03
Chr2 CDS 2196582 2196992 2196582 ID=MsG0280006459.01.T03:cds;Parent=MsG0280006459.01.T03
Chr2 three_prime_UTR 2195506 2196581 2195506 ID=MsG0280006459.01.T03:three_prime_utr;Parent=MsG0280006459.01.T03
Chr2 three_prime_UTR 2194926 2195420 2194926 ID=MsG0280006459.01.T03:three_prime_utr;Parent=MsG0280006459.01.T03
Chr2 mRNA 2194926 2196056 2194926 ID=MsG0280006459.01.T04;Parent=MsG0280006459.01;Name=MsG0280006459.01.T04;_AED=0.49;_eAED=0.49;_QI=0|1|0.66|1|1|1|3|393|130
Chr2 exon 2195902 2196056 2195902 ID=MsG0280006459.01.T04:exon:348;Parent=MsG0280006459.01.T04
Chr2 CDS 2195902 2196056 2195902 ID=MsG0280006459.01.T04:cds;Parent=MsG0280006459.01.T04
Chr2 CDS 2195506 2195641 2195506 ID=MsG0280006459.01.T04:cds;Parent=MsG0280006459.01.T04
Chr2 CDS 2195319 2195420 2195319 ID=MsG0280006459.01.T04:cds;Parent=MsG0280006459.01.T04
Chr2 three_prime_UTR 2194926 2195318 2194926 ID=MsG0280006459.01.T04:three_prime_utr;Parent=MsG0280006459.01.T04
Gene Sequence

>MsG0280006459.01.T04

TTGCAGTTGGATATTAAAACCAAATTGTGCATAAGGGACAGTTTATACCGTTTAGCTAAGAGTGCTGAGCAAAGACATATTATAACAAACGCAAATGGTTGCATTGGAGATGGTACTGAAGCATGCAGAGACACAATGGCTCAGGATACAAGCAGGTGTACAGGATTCGTTGATATCGAAACCAACACAAATCCTATTGATCGGTCTATAGCACACTTATTGTTTCACAGGCCGACAGATCCATCAACTTTGCTTCCAAACGATATTGCACCTTTCAAATCCAATGCAGCGATACATGAATCAGCAAGCAATCCAGGAAAGGCTGAGAATCAGTTCTTTCAGGAAGATTCTTCTACCGATGTAGAGAAAAAGCTTTTAGGGAGTAACACCTAG

>MsG0280006459.01.T02

ATGTCAAACATCTGTATGTTTGAGGGATTCAGAAGTGGCTTGGTAGCTATTAATAACTCCAGACACACTGCCCTTGAGAAAATATTGCCGATTAGTGGTGGTGTAGCTGATATTAATGTTAATGTGAAGTATACAGAACTCATCCTTGTTAAATGCAAAAGGCAAACTTCAGATAATACAGGCATGTCTGAGCACTGTTTCAAGAGCAGCAATATAGATTCTGGTGGTAGCGAGCTTTGTGCAGATGATACCATCTTTGAAGGCAAGTATGTGGTGGAAGATGATAGTGCGTGTCAATATCCAATAAATGACATATCTCAAGACGATAATGAACTCAGTTTTCTTGATAATGATGGATGGCTGGATATAGGAAACTTAGACGATGTTGACAGGATGTTAAGCTGTGATTTAACTTTTGGAATGGAGAGTCTCAATAATGAAGAGGAGTTCTGCTGGTTTTCTTCTTCACATGGTGCTGAGGGTTCTGATGATGCACTAAAGTCCGACATAGAGCTTCATTATGCAGAAATGAGTCCATTGAAAAACATATCAGAATACAATATGGATTCCTCAAAAGAAAACATTGGATTTCTACCGGTCAATGGTTCAAACAAAAAGTCATCCCCTGGTGATAAGAAGATAAGATCTCAAATGGATGTGGATGACAATGTTGTCCCTGCTTCATTATCAATGTTCAGTGAATCAGACACAAAATCTGGTCATAAAGATGTCTTGGTGCCGAAAGAAAAGAAGCTTCCAAAGTCATCAGCAGGAAAGCGAAAAAATGGCAATTCTGTTCATCCTTATACTCCTCCTGAGCAATATGCAGACATAAATCAGCGGTGTGGAGCCTCTTCTAGTGGTGTTACTTCTCTTGGTAGTATCCAGAAGCATAAGCAGAACATAGATTCTAATTCTTTAGGTTGCATACTGACACAAATTCCTTCAACGCACCTAGAATTTAGTCATGCTCTAAATCACACTTCACTCTCTTCGACTTTCTCTGGATTAAGAGCTGAACATGACGGACATATGTCTCCTTCATTTATAGATTTGTCTTATGCCTCAAACATGGATAGTTCTCATGGTCATTCTTGGTGGCTGCTGCCTCAAAAACTAATGAGAAGAGAGAAAAGTATCATAGCCATGATCACCTCTTAA

>MsG0280006459.01.T03

ATGTCAAACATCTGTATGTTTGAGGGATTCAGAAGTGGCTTGGTAGCTATTAATAACTCCAGACACACTGCCCTTGAGAAAATATTGCCGATTAGTGGTGGTGTAGCTGATATTAATGTTAATGTGAAGTATACAGAACTCATCCTTGTTAAATGCAAAAGGCAAACTTCAGATAATACAGGCATGTCTGAGCACTGTTTCAAGAGCAGCAATATAGATTCTGGTGGTAGCGAGCTTTGTGCAGATGATACCATCTTTGAAGGCAAGTATGTGGTGGAAGATGATAGTGCGTGTCAATATCCAATAAATGACATATCTCAAGACGATAATGAACTCAGTTTTCTTGATAATGATGGATGGCTGGATATAGGAAACTTAGACGATGTTGACAGGATGTTAAGCTGTGATTTAACTTTTGGAATGGAGAGTCTCAATAATGAAGAGGAGTTCTGCTGGTTTTCTTCTTCACATGGTGCTGAGGGTTCTGATGATGCACTAAAGTCCGACATAGAGCTTCATTATGCAGAAATGAGTCCATTGAAAAACATATCAGAATACAATATGGATTCCTCAAAAGAAAACATTGGATTTCTACCGGTCAATGGTTCAAACAAAAAGTCATCCCCTGGTGATAAGAAGATAAGATCTCAAATGGATGTGGATGACAATGTTGTCCCTGCTTCATTATCAATGTTCAGTGAATCAGACACAAAATCTGGTCATAAAGATGTCTTGGTGCCGAAAGAAAAGAAGCTTCCAAAGTCATCAGCAGGAAAGCGAAAAAATGGCAATTCTGTTCATCCTTATACTCCTCCTGAGCAATATGCAGACATAAATCAGCGGTGTGGAGCCTCTTCTAGTGGTGTTACTTCTCTTGGTAGTATCCAGAAGCATAAGCAGAACATAGATTCTAATTCTTTAGGTTGCATACTGACACAAATTCCTTCAACGCACCTAGAATTTAGTCATGCTCTAAATCACACTTCACTCTCTTCGACTTTCTCTGGATTAAGAGCTGAACATGACGGACATATGTCTCCTTCATTTATAGATTTGTCTTATGCCTCAAACATGGATAGTTCTCATGGTCATTCTTGGTGGCTGCTGCCTCAAAAACTAATGAGAAGAGAGAAAAGTATCATAGCCATGATCACCTCTTAA

>MsG0280006459.01.T01

ATGTCAAACATCTGTATGTTTGAGGGATTCAGAAGTGGCTTGGTAGCTATTAATAACTCCAGACACACTGCCCTTGAGAAAATATTGCCGATTAGTGGTGGTGTAGCTGATATTAATGTTAATGTGAAGTATACAGAACTCATCCTTGTTAAATGCAAAAGGCAAACTTCAGATAATACAGGCATGTCTGAGCACTGTTTCAAGAGCAGCAATATAGATTCTGGTGGTAGCGAGCTTTGTGCAGATGATACCATCTTTGAAGGCAAGTATGTGGTGGAAGATGATAGTGCGTGTCAATATCCAATAAATGACATATCTCAAGACGATAATGAACTCAGTTTTCTTGATAATGATGGATGGCTGGATATAGGAAACTTAGACGATGTTGACAGGATGTTAAGCTGTGATTTAACTTTTGGAATGGAGAGTCTCAATAATGAAGAGGAGTTCTGCTGGTTTTCTTCTTCACATGGTGCTGAGGGTTCTGATGATGCACTAAAGTCCGACATAGAGCTTCATTATGCAGAAATGAGTCCATTGAAAAACATATCAGAATACAATATGGATTCCTCAAAAGAAAACATTGGATTTCTACCGGTCAATGGTTCAAACAAAAAGTCATCCCCTGGTGATAAGAAGATAAGATCTCAAATGGATGTGGATGACAATGTTGTCCCTGCTTCATTATCAATGTTCAGTGAATCAGACACAAAATCTGGTCATAAAGATGTCTTGGTGCCGAAAGAAAAGAAGCTTCCAAAGTCATCAGCAGGAAAGCGAAAAAATGGCAATTCTGTTCATCCTTATACTCCTCCTGAGCAATATGCAGACATAAATCAGCGGTGTGGAGCCTCTTCTAGTGGTGTTACTTCTCTTGGTAGTATCCAGAAGCATAAGCAGAACATAGATTCTAATTCTTTAGGTTGCATACTGACACAAATTCCTTCAACGCACCTAGAATTTAGTCATGCTCTAAATCACACTTCACTCTCTTCGACTTTCTCTGGATTAAGAGCTGAACATGACGGACATATGTCTCCTTCATTTATAGATTTGTCTTATGCCTCAAACATGGATAGTTCTCATGGTCATTCTTGGTGGCTGCTGCCTCAAAAACTAATGAGAAGAGAGAAAAGTATCATAGCCATGATCACCTCTTAA
Protein sequence

>MsG0280006459.01.T04

LQLDIKTKLCIRDSLYRLAKSAEQRHIITNANGCIGDGTEACRDTMAQDTSRCTGFVDIETNTNPIDRSIAHLLFHRPTDPSTLLPNDIAPFKSNAAIHESASNPGKAENQFFQEDSSTDVEKKLLGSNT*

>MsG0280006459.01.T02

MSNICMFEGFRSGLVAINNSRHTALEKILPISGGVADINVNVKYTELILVKCKRQTSDNTGMSEHCFKSSNIDSGGSELCADDTIFEGKYVVEDDSACQYPINDISQDDNELSFLDNDGWLDIGNLDDVDRMLSCDLTFGMESLNNEEEFCWFSSSHGAEGSDDALKSDIELHYAEMSPLKNISEYNMDSSKENIGFLPVNGSNKKSSPGDKKIRSQMDVDDNVVPASLSMFSESDTKSGHKDVLVPKEKKLPKSSAGKRKNGNSVHPYTPPEQYADINQRCGASSSGVTSLGSIQKHKQNIDSNSLGCILTQIPSTHLEFSHALNHTSLSSTFSGLRAEHDGHMSPSFIDLSYASNMDSSHGHSWWLLPQKLMRREKSIIAMITS*

>MsG0280006459.01.T03

MSNICMFEGFRSGLVAINNSRHTALEKILPISGGVADINVNVKYTELILVKCKRQTSDNTGMSEHCFKSSNIDSGGSELCADDTIFEGKYVVEDDSACQYPINDISQDDNELSFLDNDGWLDIGNLDDVDRMLSCDLTFGMESLNNEEEFCWFSSSHGAEGSDDALKSDIELHYAEMSPLKNISEYNMDSSKENIGFLPVNGSNKKSSPGDKKIRSQMDVDDNVVPASLSMFSESDTKSGHKDVLVPKEKKLPKSSAGKRKNGNSVHPYTPPEQYADINQRCGASSSGVTSLGSIQKHKQNIDSNSLGCILTQIPSTHLEFSHALNHTSLSSTFSGLRAEHDGHMSPSFIDLSYASNMDSSHGHSWWLLPQKLMRREKSIIAMITS*

>MsG0280006459.01.T01

MSNICMFEGFRSGLVAINNSRHTALEKILPISGGVADINVNVKYTELILVKCKRQTSDNTGMSEHCFKSSNIDSGGSELCADDTIFEGKYVVEDDSACQYPINDISQDDNELSFLDNDGWLDIGNLDDVDRMLSCDLTFGMESLNNEEEFCWFSSSHGAEGSDDALKSDIELHYAEMSPLKNISEYNMDSSKENIGFLPVNGSNKKSSPGDKKIRSQMDVDDNVVPASLSMFSESDTKSGHKDVLVPKEKKLPKSSAGKRKNGNSVHPYTPPEQYADINQRCGASSSGVTSLGSIQKHKQNIDSNSLGCILTQIPSTHLEFSHALNHTSLSSTFSGLRAEHDGHMSPSFIDLSYASNMDSSHGHSWWLLPQKLMRREKSIIAMITS*