AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006103.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006103.01.T01 MTR_1g114540 85.413 521 13 4 1 506 432 904 0.0 893
MsG0180006103.01.T01 MTR_1g038793 78.876 516 61 5 1 501 426 908 0.0 816
MsG0180006103.01.T01 MTR_2g081070 65.784 453 143 3 1 441 447 899 0.0 584
MsG0180006103.01.T01 MTR_8g464480 55.357 504 204 5 1 484 428 930 2.64e-176 528
MsG0180006103.01.T01 MTR_3g105200 41.211 512 272 13 2 499 320 816 7.32e-105 343
MsG0180006103.01.T01 MTR_3g105200 41.211 512 272 13 2 499 320 816 9.18e-105 343
MsG0180006103.01.T01 MTR_4g125690 43.488 453 235 10 1 439 322 767 4.21e-100 330
MsG0180006103.01.T01 MTR_1g015620 38.826 528 286 17 1 511 318 825 7.27e-98 323
MsG0180006103.01.T01 MTR_1g037500 42.082 461 228 12 1 434 322 770 3.06e-97 322
MsG0180006103.01.T01 MTR_7g115430 39.306 519 265 15 1 507 322 802 7.67e-97 321
MsG0180006103.01.T01 MTR_1g080600 40.355 451 252 9 1 439 321 766 2.21e-95 312
MsG0180006103.01.T01 MTR_7g099290 38.703 509 261 12 1 496 323 793 1.16e-94 315
MsG0180006103.01.T01 MTR_1g070280 41.050 419 224 9 1 404 132 542 1.12e-89 294
MsG0180006103.01.T01 MTR_1g070280 41.050 419 224 9 1 404 322 732 6.28e-89 294
MsG0180006103.01.T01 MTR_1g070280 41.050 419 224 9 1 404 322 732 8.62e-89 294
MsG0180006103.01.T01 MTR_1g070280 41.050 419 224 9 1 404 322 732 3.08e-88 294
MsG0180006103.01.T01 MTR_1g070400 37.815 476 250 11 1 438 319 786 3.48e-87 288
MsG0180006103.01.T01 MTR_2g062660 38.377 456 234 11 1 433 322 753 2.42e-83 282
MsG0180006103.01.T01 MTR_1g069290 32.102 352 204 10 176 499 1 345 6.72e-42 160
MsG0180006103.01.T01 MTR_7g026950 86.538 52 7 0 68 119 34 85 2.90e-26 103
MsG0180006103.01.T01 MTR_1g069305 39.370 127 71 3 1 123 17 141 4.36e-18 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006103.01.T01 AT3G19960 74.757 515 84 3 1 500 418 901 0.0 783
MsG0180006103.01.T01 AT3G19960 74.757 515 84 3 1 500 418 901 0.0 783
MsG0180006103.01.T01 AT3G19960 74.757 515 84 3 1 500 418 901 0.0 783
MsG0180006103.01.T01 AT1G50360 74.708 514 84 3 1 499 410 892 0.0 783
MsG0180006103.01.T01 AT3G19960 80.568 458 74 2 1 443 418 875 0.0 766
MsG0180006103.01.T01 AT3G19960 66.045 536 88 7 1 500 434 911 0.0 681
MsG0180006103.01.T01 AT5G54280 59.010 505 189 4 1 489 467 969 0.0 600
MsG0180006103.01.T01 AT5G54280 59.010 505 189 4 1 489 277 779 0.0 600
MsG0180006103.01.T01 AT4G27370 62.806 449 159 2 1 441 418 866 0.0 573
MsG0180006103.01.T01 AT4G27370 62.806 449 159 2 1 441 420 868 0.0 572
MsG0180006103.01.T01 AT4G27370 62.806 449 159 2 1 441 420 868 0.0 572
MsG0180006103.01.T01 AT4G27370 62.806 449 159 2 1 441 420 868 0.0 572
MsG0180006103.01.T01 AT5G43900 39.439 535 266 15 1 495 322 838 1.42e-99 328
MsG0180006103.01.T01 AT5G43900 39.439 535 266 15 1 495 379 895 1.77e-99 328
MsG0180006103.01.T01 AT5G43900 39.439 535 266 15 1 495 382 898 2.14e-99 328
MsG0180006103.01.T01 AT1G54560 38.740 524 270 11 1 511 322 807 1.99e-98 325
MsG0180006103.01.T01 AT1G54560 38.740 524 270 11 1 511 325 810 2.58e-98 325
MsG0180006103.01.T01 AT4G33200 40.156 513 253 14 2 499 327 800 9.49e-98 323
MsG0180006103.01.T01 AT4G33200 40.156 513 253 14 2 499 327 800 9.53e-98 323
MsG0180006103.01.T01 AT4G33200 40.156 513 253 14 2 499 327 800 1.06e-97 323
MsG0180006103.01.T01 AT4G33200 40.156 513 253 14 2 499 327 800 1.10e-97 323
MsG0180006103.01.T01 AT1G08730 38.899 527 265 13 1 511 330 815 3.30e-96 319
MsG0180006103.01.T01 AT1G08730 38.899 527 265 13 1 511 322 807 3.60e-96 319
MsG0180006103.01.T01 AT2G31900 35.768 534 292 13 1 511 64 569 7.42e-95 313
MsG0180006103.01.T01 AT2G31900 35.768 534 292 13 1 511 207 712 1.42e-94 314
MsG0180006103.01.T01 AT2G31900 35.768 534 292 13 1 511 322 827 2.04e-94 314
MsG0180006103.01.T01 AT2G31900 35.768 534 292 13 1 511 322 827 2.04e-94 314
MsG0180006103.01.T01 AT2G31900 35.768 534 292 13 1 511 322 827 2.13e-94 314
MsG0180006103.01.T01 AT1G04160 38.879 535 269 14 1 495 323 839 8.69e-94 311
MsG0180006103.01.T01 AT1G04160 38.879 535 269 14 1 495 323 839 1.38e-93 311
MsG0180006103.01.T01 AT4G28710 37.266 534 295 12 1 499 321 849 1.35e-91 306
MsG0180006103.01.T01 AT1G17580 36.502 526 299 11 1 497 319 838 5.50e-91 304
MsG0180006103.01.T01 AT5G20490 37.782 532 290 17 1 500 256 778 8.37e-91 303
MsG0180006103.01.T01 AT5G20490 37.782 532 290 17 1 500 321 843 1.27e-90 303
MsG0180006103.01.T01 AT5G20490 37.782 532 290 17 1 500 322 844 1.32e-90 303
MsG0180006103.01.T01 AT2G33240 38.086 512 268 12 1 500 320 794 1.94e-89 300
MsG0180006103.01.T01 AT2G33240 38.086 512 268 12 1 500 338 812 2.35e-89 300
MsG0180006103.01.T01 AT2G33240 38.086 512 268 12 1 500 338 812 2.35e-89 300
MsG0180006103.01.T01 AT2G33240 38.086 512 268 12 1 500 343 817 2.40e-89 300
MsG0180006103.01.T01 AT2G33240 38.086 512 268 12 1 500 338 812 2.62e-89 300
MsG0180006103.01.T01 AT2G33240 38.086 512 268 12 1 500 338 812 2.71e-89 300
MsG0180006103.01.T01 AT2G33240 38.086 512 268 12 1 500 338 812 2.75e-89 300
MsG0180006103.01.T01 AT2G20290 36.882 526 268 14 1 507 332 812 1.27e-88 297
MsG0180006103.01.T01 AT1G04600 37.891 512 269 12 1 500 321 795 1.31e-88 298
MsG0180006103.01.T01 AT2G20290 36.882 526 268 14 1 507 321 801 1.50e-88 297
MsG0180006103.01.T01 AT2G20290 36.882 526 268 14 1 507 321 801 1.65e-88 297
MsG0180006103.01.T01 AT2G20290 36.882 526 268 14 1 507 321 801 1.88e-88 297
MsG0180006103.01.T01 AT3G58160 39.713 418 237 9 1 408 320 732 1.22e-84 284
MsG0180006103.01.T01 AT3G58160 39.713 418 237 9 1 408 320 732 1.22e-84 284
MsG0180006103.01.T01 AT3G58160 39.713 418 237 9 1 408 320 732 1.76e-84 284
MsG0180006103.01.T01 AT3G58160 39.713 418 237 9 1 408 320 732 1.82e-84 284
MsG0180006103.01.T01 AT3G58160 39.713 418 237 9 1 408 320 732 1.82e-84 284
MsG0180006103.01.T01 AT2G33240 31.348 319 176 9 190 500 2 285 1.39e-28 120

Find 191 sgRNAs with CRISPR-Local

Find 599 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGTATTCTAGATATTTA+TGG 0.131396 1:+100193322 MsG0180006103.01.T01:CDS
CTCGGGTGGCAACGATTTAA+TGG 0.238259 1:-100188508 None:intergenic
CCCATTCATGCAGTTATTAG+AGG 0.247536 1:+100197657 MsG0180006103.01.T01:CDS
ATACAGGGGAACTTTCTTAA+AGG 0.266786 1:-100190015 None:intergenic
TCTTGGCTTCAACTTTCTAA+TGG 0.267611 1:+100189577 MsG0180006103.01.T01:five_prime_UTR
CTCATGTCTGTTTGATTGGC+TGG 0.275418 1:+100193246 MsG0180006103.01.T01:CDS
TTTACTCATGTCTGTTTGAT+TGG 0.283584 1:+100193242 MsG0180006103.01.T01:CDS
TCCAGGCGACTGGAGGTTAT+TGG 0.292580 1:-100196378 None:intergenic
CCTGAGATAGCGTCAACTTC+TGG 0.296103 1:-100192882 None:intergenic
AACTTTCTTAAAGGGATTTA+CGG 0.299780 1:-100190006 None:intergenic
CCGCATGGCTGTATTTGAAC+TGG 0.301661 1:+100190999 MsG0180006103.01.T01:five_prime_UTR
TAGCCAACTTGATACATTTC+AGG 0.308509 1:-100196725 None:intergenic
TATGACATGTCGAAAGAATT+AGG 0.308728 1:-100197594 None:intergenic
CAATGCTTGCTGCAGTATTA+TGG 0.317251 1:+100192216 MsG0180006103.01.T01:exon
CCTTGAAAATGTTGCATCTC+AGG 0.319795 1:+100196655 MsG0180006103.01.T01:CDS
AAAGGTGAAAGATGAAGATT+TGG 0.324068 1:+100189756 MsG0180006103.01.T01:five_prime_UTR
CTTGGCTTCAACTTTCTAAT+GGG 0.325260 1:+100189578 MsG0180006103.01.T01:five_prime_UTR
CAAATGCTGCTTAAGCTTGT+TGG 0.328225 1:-100194579 None:intergenic
GGGATATTCGAACCACTTCT+AGG 0.331183 1:-100196448 None:intergenic
ACAAAATTGTTCTTCCGAAC+AGG 0.332598 1:+100196749 MsG0180006103.01.T01:CDS
GAGATTCACTTCAGTGAAAC+TGG 0.335244 1:+100191359 MsG0180006103.01.T01:five_prime_UTR
GGATCAAATGGTCGTGAAAA+TGG 0.337756 1:+100188609 MsG0180006103.01.T01:five_prime_UTR
GACAAAAGCAGGGCCTGTTT+TGG 0.345886 1:+100189980 MsG0180006103.01.T01:intron
TTTGATTGTATCTATGTTGC+AGG 0.349510 1:-100189861 None:intergenic
TTACCAAAGGCTTCTAGTAT+TGG 0.351853 1:-100191168 None:intergenic
ACGTGTACAAAGTTGCTTTA+GGG 0.353920 1:+100197494 MsG0180006103.01.T01:CDS
CCAGGCGACTGGAGGTTATT+GGG 0.354157 1:-100196377 None:intergenic
GTTGGTCCCTTACACAAATT+AGG 0.354426 1:+100195157 MsG0180006103.01.T01:CDS
GCAAATCCTGATATTCTTGA+TGG 0.356271 1:+100189784 MsG0180006103.01.T01:five_prime_UTR
ATAAGAATAAGAATTATTAT+AGG 0.360408 1:-100191024 None:intergenic
GTGAAGATAATATCAACTTC+TGG 0.363052 1:+100189613 MsG0180006103.01.T01:five_prime_UTR
GTGAAAATGGTGCAATAGTA+AGG 0.370984 1:+100188622 MsG0180006103.01.T01:five_prime_UTR
GCTGCCCTTGGTGGCGGAAG+TGG 0.372608 1:+100191117 MsG0180006103.01.T01:five_prime_UTR
TTCAGCACTGCCAAGTTGAT+TGG 0.374261 1:+100192790 MsG0180006103.01.T01:CDS
TACGTGTACAAAGTTGCTTT+AGG 0.374427 1:+100197493 MsG0180006103.01.T01:CDS
GTTGTCATTGCAAGGAGCTT+TGG 0.381506 1:+100197529 MsG0180006103.01.T01:CDS
TCAACTTTCTAATGGGGATT+GGG 0.384009 1:+100189585 MsG0180006103.01.T01:five_prime_UTR
TTTCGACATGTCATATTCCT+TGG 0.384169 1:+100197602 MsG0180006103.01.T01:CDS
CTTGGTCTCCTTTGCTAATG+TGG 0.384347 1:-100192181 None:intergenic
TTCTAATGGGGATTGGGAAC+TGG 0.387556 1:+100189591 MsG0180006103.01.T01:five_prime_UTR
GGATTTACGGCCACCAAAAC+AGG 0.387935 1:-100189993 None:intergenic
TCCACTCCATCAAGAATATC+AGG 0.388008 1:-100189790 None:intergenic
GGATGGAATCCACGTGCATT+AGG 0.389859 1:-100195057 None:intergenic
TTCAACTTTCTAATGGGGAT+TGG 0.390369 1:+100189584 MsG0180006103.01.T01:five_prime_UTR
TCCTCTAATAACTGCATGAA+TGG 0.393534 1:-100197658 None:intergenic
CCCAATAACCTCCAGTCGCC+TGG 0.396945 1:+100196377 MsG0180006103.01.T01:CDS
AATAGTAAGGGAGGTTTCTA+AGG 0.401155 1:+100188635 MsG0180006103.01.T01:five_prime_UTR
ATCCGTACCGTTTGGAAAAG+TGG 0.405095 1:-100194546 None:intergenic
TACAGGGGAACTTTCTTAAA+GGG 0.406307 1:-100190014 None:intergenic
ACATCCAAGACGGCATTGAT+TGG 0.406463 1:+100193921 MsG0180006103.01.T01:CDS
CAATCGTCATTTATTCAAGT+TGG 0.408069 1:+100193521 MsG0180006103.01.T01:CDS
TAGGAATGCAGTTGTATCAT+AGG 0.414575 1:-100195020 None:intergenic
GATTCACCATTTCCACCATA+TGG 0.415359 1:-100188705 None:intergenic
AATGTTAAATCCGTACCGTT+TGG 0.417979 1:-100194554 None:intergenic
TTTAAGAAAGTTCCCCTGTA+TGG 0.419308 1:+100190017 MsG0180006103.01.T01:five_prime_UTR
TCATTTATTCAAGTTGGAAC+AGG 0.420126 1:+100193527 MsG0180006103.01.T01:CDS
CAATATAGTTAGTACCATAC+AGG 0.429129 1:-100190031 None:intergenic
TTCAATAGCTTTACGCTTGT+AGG 0.429304 1:-100190057 None:intergenic
CGCATGGCTGTATTTGAACT+GGG 0.429915 1:+100191000 MsG0180006103.01.T01:five_prime_UTR
GCTGTTGGCAAAAGACAAAC+TGG 0.435071 1:+100193292 MsG0180006103.01.T01:CDS
CAATACCTGGCTGCCCTTGG+TGG 0.437809 1:+100191108 MsG0180006103.01.T01:five_prime_UTR
TGCCCCACCTAATTTGTGTA+AGG 0.442781 1:-100195164 None:intergenic
ATACTAGAAGCCTTTGGTAA+TGG 0.447037 1:+100191171 MsG0180006103.01.T01:five_prime_UTR
TTCGACATGTCATATTCCTT+GGG 0.449165 1:+100197603 MsG0180006103.01.T01:CDS
CTAGAGGATGTAGAAATAGA+TGG 0.451568 1:-100188788 None:intergenic
CATCTATTTCTACATCCTCT+AGG 0.456504 1:+100188789 MsG0180006103.01.T01:five_prime_UTR
GAATCTCCATATGGTGGAAA+TGG 0.460092 1:+100188699 MsG0180006103.01.T01:five_prime_UTR
TACCTGGCTGCCCTTGGTGG+CGG 0.467072 1:+100191111 MsG0180006103.01.T01:five_prime_UTR
CTTATAATCTACATATATAG+TGG 0.469616 1:+100191042 MsG0180006103.01.T01:five_prime_UTR
AATTCTAATTCATGCTTCAA+AGG 0.472436 1:+100194602 MsG0180006103.01.T01:CDS
GAAAATTGTGCAGAAACCAC+TGG 0.473820 1:+100194496 MsG0180006103.01.T01:intron
TATAGTGGTGAGAGTGGAGC+AGG 0.476543 1:+100191057 MsG0180006103.01.T01:five_prime_UTR
TGTTTCAGAAGCTTCAGTCT+TGG 0.477276 1:+100189560 MsG0180006103.01.T01:intron
TTCCGCCACCAAGGGCAGCC+AGG 0.479598 1:-100191113 None:intergenic
CCAGAAGTTGACGCTATCTC+AGG 0.480744 1:+100192882 MsG0180006103.01.T01:CDS
TAGTGATGCAAGAGATGCTT+TGG 0.481096 1:+100193210 MsG0180006103.01.T01:CDS
TTTACTGTGCGTCATTATGC+AGG 0.481346 1:+100194641 MsG0180006103.01.T01:CDS
GATTTAATGGACTGGAAAGC+AGG 0.483503 1:-100188495 None:intergenic
GGAAAGATGTCGAAGACAAC+CGG 0.487573 1:+100188465 None:intergenic
CGTATATGCTAATGAAGATT+CGG 0.487615 1:+100188745 MsG0180006103.01.T01:five_prime_UTR
CTCACCAAAAGTTTGCGAAA+AGG 0.490461 1:+100196495 MsG0180006103.01.T01:CDS
ACTGATCTGATTGGATCAAA+TGG 0.490726 1:+100188597 MsG0180006103.01.T01:five_prime_UTR
TTATTCTTACCTGCCCTGTT+CGG 0.491425 1:-100196763 None:intergenic
GCATTGCAAATACATTCTCT+TGG 0.493269 1:-100192199 None:intergenic
AATCCAATACTAGAAGCCTT+TGG 0.493384 1:+100191165 MsG0180006103.01.T01:five_prime_UTR
TGCATAATGACGCACAGTAA+AGG 0.493722 1:-100194639 None:intergenic
CCTCTAATAACTGCATGAAT+GGG 0.500649 1:-100197657 None:intergenic
CTGCAGCAGTTGAGATGTTG+TGG 0.503046 1:+100196422 MsG0180006103.01.T01:CDS
CATCCAAGACGGCATTGATT+GGG 0.503811 1:+100193922 MsG0180006103.01.T01:CDS
TCAAGAATATCAGGATTTGC+TGG 0.506335 1:-100189781 None:intergenic
CTGTTATTTCACTGCCTGAC+GGG 0.508345 1:+100189644 MsG0180006103.01.T01:five_prime_UTR
TGTTCAAGCTGTTGAGGATG+AGG 0.509804 1:+100192280 MsG0180006103.01.T01:CDS
GTGGTTCGAATATCCCGATC+AGG 0.510316 1:+100196455 MsG0180006103.01.T01:CDS
ATGCAATACCTGGCTGCCCT+TGG 0.512818 1:+100191105 MsG0180006103.01.T01:five_prime_UTR
TTGTGTAAGGGACCAACTAC+AGG 0.513493 1:-100195151 None:intergenic
TAATCGAAACACTGGTCTTG+TGG 0.515373 1:+100188545 MsG0180006103.01.T01:five_prime_UTR
ATTGTTCTTCCGAACAGGGC+AGG 0.515835 1:+100196754 MsG0180006103.01.T01:CDS
GTGAGAAGCACTGATCTGAT+TGG 0.516835 1:+100188588 MsG0180006103.01.T01:five_prime_UTR
AAAATTGTGCAGAAACCACT+GGG 0.517976 1:+100194497 MsG0180006103.01.T01:intron
ACTTCTCTTACTTTCCCGTC+AGG 0.518266 1:-100189658 None:intergenic
GCTTGAGGATAGAAGTTGGA+TGG 0.520600 1:-100195074 None:intergenic
GAAAGAATTAGGTGGAGTAA+AGG 0.520844 1:-100197583 None:intergenic
TGCAGCAGTTGAGATGTTGT+GGG 0.523793 1:+100196423 MsG0180006103.01.T01:CDS
TTGCCTGAAATGTATCAAGT+TGG 0.524551 1:+100196722 MsG0180006103.01.T01:CDS
CAAAATTGTTCTTCCGAACA+GGG 0.524642 1:+100196750 MsG0180006103.01.T01:CDS
TGTGTAATTCAGACAAAAGC+AGG 0.529474 1:+100189969 MsG0180006103.01.T01:intron
CGTGTACAAAGTTGCTTTAG+GGG 0.531225 1:+100197495 MsG0180006103.01.T01:CDS
TCTAGTTGGAAATCCTGATC+GGG 0.534083 1:-100196468 None:intergenic
ATGGTGAATCATTTGAAGAC+AGG 0.535049 1:+100188718 MsG0180006103.01.T01:five_prime_UTR
TAGCCCAATCAATGCCGTCT+TGG 0.537443 1:-100193925 None:intergenic
AATGTCACAGCCAATCAACT+TGG 0.541437 1:-100192800 None:intergenic
CAGTCTGAGAAACCTGTAGT+TGG 0.541630 1:+100195139 MsG0180006103.01.T01:CDS
ATCTATTTCTACATCCTCTA+GGG 0.541927 1:+100188790 MsG0180006103.01.T01:five_prime_UTR
TAGAGGAGAGAAAAGCAGAA+AGG 0.542815 1:+100197674 MsG0180006103.01.T01:CDS
CTCAGACTGACTAAGCATAT+AGG 0.542967 1:-100195125 None:intergenic
TTGGAGTGCTTGAAGATACT+AGG 0.544454 1:+100197448 MsG0180006103.01.T01:CDS
ATTTGCTTGAGGATAGAAGT+TGG 0.544632 1:-100195078 None:intergenic
GTTCATATGATCCAGGCGAC+TGG 0.547506 1:-100196388 None:intergenic
TTCTAGTTGGAAATCCTGAT+CGG 0.548275 1:-100196469 None:intergenic
CTTGCTGCAGTATTATGGTT+GGG 0.550850 1:+100192221 MsG0180006103.01.T01:CDS
TAACAATCGTGCTGGCGGCA+TGG 0.553844 1:+100188662 MsG0180006103.01.T01:five_prime_UTR
AGTCCTTGTTCATATGATCC+AGG 0.554551 1:-100196395 None:intergenic
TTAGTATCAAACTTGAACTC+GGG 0.556529 1:-100188525 None:intergenic
ATAAACAAATCACTAGCTGT+TGG 0.560898 1:+100193277 MsG0180006103.01.T01:CDS
CTGGAAAGCAGGCGGGACAC+CGG 0.563059 1:-100188484 None:intergenic
CCAGTCTGTTACTCTTCCCA+AGG 0.565730 1:-100197619 None:intergenic
TTTATTCAAGTTGGAACAGG+AGG 0.566284 1:+100193530 MsG0180006103.01.T01:CDS
GTGGCAACGATTTAATGGAC+TGG 0.566494 1:-100188503 None:intergenic
TCAAGCTCGTTGTCATTGCA+AGG 0.566845 1:+100197521 MsG0180006103.01.T01:CDS
TTGGCTTCAACTTTCTAATG+GGG 0.568169 1:+100189579 MsG0180006103.01.T01:five_prime_UTR
AAGGAAGTTAACAATCGTGC+TGG 0.571730 1:+100188654 MsG0180006103.01.T01:five_prime_UTR
TCCTGATATTCTTGATGGAG+TGG 0.572931 1:+100189789 MsG0180006103.01.T01:five_prime_UTR
TTTGATACTAATCGAAACAC+TGG 0.574653 1:+100188537 MsG0180006103.01.T01:five_prime_UTR
AGTGGACTCTTCGTCTAACA+AGG 0.575256 1:-100194528 None:intergenic
TAATGGACTGGAAAGCAGGC+GGG 0.575437 1:-100188491 None:intergenic
CCTTGGGAAGAGTAACAGAC+TGG 0.575938 1:+100197619 MsG0180006103.01.T01:CDS
GCTTGCTGCAGTATTATGGT+TGG 0.579317 1:+100192220 MsG0180006103.01.T01:CDS
ATTAGTATCAAACTTGAACT+CGG 0.580607 1:-100188526 None:intergenic
TACATATATAGTGGTGAGAG+TGG 0.581061 1:+100191051 MsG0180006103.01.T01:five_prime_UTR
CATTGCAAGGAGCTTTGGAG+AGG 0.587899 1:+100197534 MsG0180006103.01.T01:CDS
ACTAGGAATCGTACCCTCCA+TGG 0.590863 1:+100197465 MsG0180006103.01.T01:CDS
GATGTAGAAATAGATGGTTG+AGG 0.593263 1:-100188782 None:intergenic
TCTGATGAAGAATCTCCATA+TGG 0.594400 1:+100188690 MsG0180006103.01.T01:five_prime_UTR
GCCCCACCTAATTTGTGTAA+GGG 0.599206 1:-100195163 None:intergenic
TTAAATAACTAAGTTGCATG+AGG 0.599721 1:-100189816 None:intergenic
TATTCCACTTCCGCCACCAA+GGG 0.600523 1:-100191121 None:intergenic
ACTCCATCTGCTTTCCCTAG+AGG 0.602644 1:-100188804 None:intergenic
ATAGTGGTGAGAGTGGAGCA+GGG 0.603058 1:+100191058 MsG0180006103.01.T01:five_prime_UTR
TGCAGGTTGTATAAAACTGA+CGG 0.603401 1:-100189844 None:intergenic
ATAGCAACAGAAACACTAAG+TGG 0.605619 1:-100196680 None:intergenic
CATCCTCTAGGGAAAGCAGA+TGG 0.608379 1:+100188801 MsG0180006103.01.T01:five_prime_UTR
GTTCAAGCTGTTGAGGATGA+GGG 0.609769 1:+100192281 MsG0180006103.01.T01:CDS
GATGAAGAATCTCCATATGG+TGG 0.610503 1:+100188693 MsG0180006103.01.T01:five_prime_UTR
TCTGTTATTTCACTGCCTGA+CGG 0.610624 1:+100189643 MsG0180006103.01.T01:five_prime_UTR
AAATCATGTTCAAGCTGTTG+AGG 0.610781 1:+100192274 MsG0180006103.01.T01:CDS
AATATAGTTAGTACCATACA+GGG 0.612441 1:-100190030 None:intergenic
GAAGCTAAATCTGCGAAGTG+TGG 0.612514 1:+100191932 MsG0180006103.01.T01:five_prime_UTR
CTATTCCACTTCCGCCACCA+AGG 0.616550 1:-100191122 None:intergenic
CATATGATCCAGGCGACTGG+AGG 0.617239 1:-100196385 None:intergenic
TTTCAGGAATACATCCAAGA+CGG 0.618865 1:+100193911 MsG0180006103.01.T01:intron
AGGAAGATGACATTTGCTTG+AGG 0.618904 1:-100195089 None:intergenic
TCTGTAATTGCATAAACATG+AGG 0.620013 1:-100190083 None:intergenic
AAATGGTGCAATAGTAAGGG+AGG 0.622093 1:+100188626 MsG0180006103.01.T01:five_prime_UTR
GAAGTTAACAATCGTGCTGG+CGG 0.622443 1:+100188657 MsG0180006103.01.T01:five_prime_UTR
TTTGTACACGTAAAATGCCA+TGG 0.623111 1:-100197482 None:intergenic
ACTGGTCTTGTGGAAAAGCA+CGG 0.628295 1:+100188555 MsG0180006103.01.T01:five_prime_UTR
TTAATGCAGCGAATAAAATG+AGG 0.632273 1:-100196353 None:intergenic
GATGTTGTCCACATTAGCAA+AGG 0.633529 1:+100192173 MsG0180006103.01.T01:five_prime_UTR
GTATCAAACTTGAACTCGGG+TGG 0.634566 1:-100188522 None:intergenic
GCTAAATCTGCGAAGTGTGG+AGG 0.634959 1:+100191935 MsG0180006103.01.T01:five_prime_UTR
ATGTTGTGGGGTCCTAGAAG+TGG 0.635142 1:+100196436 MsG0180006103.01.T01:CDS
TGAAAATGGTGCAATAGTAA+GGG 0.638827 1:+100188623 MsG0180006103.01.T01:five_prime_UTR
CTGTAATTGCATAAACATGA+GGG 0.645908 1:-100190082 None:intergenic
TGGAGGACTATAAATATCTG+AGG 0.652452 1:+100191952 MsG0180006103.01.T01:five_prime_UTR
TACACGTAAAATGCCATGGA+GGG 0.657466 1:-100197478 None:intergenic
ATATAGGATGCAAATATCTG+AGG 0.660493 1:-100195109 None:intergenic
AGAAGAATTTCGCATAGTCA+CGG 0.661708 1:+100192013 MsG0180006103.01.T01:five_prime_UTR
TTAATGGACTGGAAAGCAGG+CGG 0.666260 1:-100188492 None:intergenic
TGTGCGTCATTATGCAGGAG+AGG 0.666881 1:+100194646 MsG0180006103.01.T01:CDS
TCGCCTGGATCATATGAACA+AGG 0.668720 1:+100196392 MsG0180006103.01.T01:CDS
AACAAGGATAGTAGCCCCAG+TGG 0.684778 1:-100194512 None:intergenic
AAACAGAGACCTAATGCACG+TGG 0.686451 1:+100195048 MsG0180006103.01.T01:CDS
ATCTTCATTAGCATATACGA+CGG 0.691352 1:-100188741 None:intergenic
GTGTAATTCAGACAAAAGCA+GGG 0.694836 1:+100189970 MsG0180006103.01.T01:intron
GCAGCAGTTGAGATGTTGTG+GGG 0.703431 1:+100196424 MsG0180006103.01.T01:CDS
GTACACGTAAAATGCCATGG+AGG 0.709869 1:-100197479 None:intergenic
GACATGTCGAAAGAATTAGG+TGG 0.726265 1:-100197591 None:intergenic
GCAATCAGAGAGATGATACG+AGG 0.741403 1:+100190110 MsG0180006103.01.T01:five_prime_UTR
CCAGTTCAAATACAGCCATG+CGG 0.747372 1:-100190999 None:intergenic
ATATAGTTAGTACCATACAG+GGG 0.788811 1:-100190029 None:intergenic
AAATTGTGCAGAAACCACTG+GGG 0.832621 1:+100194498 MsG0180006103.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTATATAAAATAA+TGG + Chr1:100193032-100193051 MsG0180006103.01.T01:intron 0.0%
!! ATAAGAATAAGAATTATTAT+AGG - Chr1:100191027-100191046 None:intergenic 10.0%
!! ATCAAATATGAAATAATTTA+GGG - Chr1:100194796-100194815 None:intergenic 10.0%
!! TCATATAAAGTTAAATAAAA+GGG + Chr1:100193823-100193842 MsG0180006103.01.T01:intron 10.0%
!! TTAACTAATAAAAATTTCTT+TGG - Chr1:100189247-100189266 None:intergenic 10.0%
!! TTAATATTATTGATATAATG+TGG + Chr1:100196184-100196203 MsG0180006103.01.T01:intron 10.0%
!! TTCATATAAAGTTAAATAAA+AGG + Chr1:100193822-100193841 MsG0180006103.01.T01:intron 10.0%
!!! TACAATATTTAAAATCTTAA+AGG + Chr1:100195797-100195816 MsG0180006103.01.T01:intron 10.0%
!!! TTTTATTTAACTTTATATGA+AGG - Chr1:100193823-100193842 None:intergenic 10.0%
!! AAAACCATATAATAAACATT+AGG - Chr1:100189078-100189097 None:intergenic 15.0%
!! ATATAAAAAAATTAACAGAC+TGG - Chr1:100193025-100193044 None:intergenic 15.0%
!! ATATAATAAACATTAGGATA+AGG - Chr1:100189072-100189091 None:intergenic 15.0%
!! ATATGAATAAAAATGATTTC+TGG - Chr1:100193379-100193398 None:intergenic 15.0%
!! CTTTCTAATATTTACATATA+TGG + Chr1:100190143-100190162 MsG0180006103.01.T01:intron 15.0%
!! GATAAAATTGAAATTATTTG+TGG + Chr1:100197031-100197050 MsG0180006103.01.T01:intron 15.0%
!! GATAATAAATTCATATGATT+TGG + Chr1:100196260-100196279 MsG0180006103.01.T01:intron 15.0%
!! GATCAAATATGAAATAATTT+AGG - Chr1:100194797-100194816 None:intergenic 15.0%
!! GTGGAAATAAAAATAAAAAT+GGG - Chr1:100196579-100196598 None:intergenic 15.0%
!! TAAACCAATCAATAATTATA+AGG + Chr1:100190302-100190321 MsG0180006103.01.T01:intron 15.0%
!! TAGTAAAAAACAAAACAAAA+AGG - Chr1:100194845-100194864 None:intergenic 15.0%
!! TTAGTTTACTTAAAAAGTTA+TGG + Chr1:100197073-100197092 MsG0180006103.01.T01:intron 15.0%
!! TTATCCTAATGTTTATTATA+TGG + Chr1:100189071-100189090 MsG0180006103.01.T01:intron 15.0%
!!! AAATACTTTTTCATATTGAT+TGG - Chr1:100190721-100190740 None:intergenic 15.0%
!!! AAGAAAACAAATTTAGTTTA+GGG - Chr1:100190819-100190838 None:intergenic 15.0%
!!! AATATTTAAAATCTTAAAGG+AGG + Chr1:100195800-100195819 MsG0180006103.01.T01:intron 15.0%
!!! CAATTGATATTAATTTTACT+TGG + Chr1:100191610-100191629 MsG0180006103.01.T01:intron 15.0%
!!! CTTTCTTTTATTTAGATATA+CGG + Chr1:100190194-100190213 MsG0180006103.01.T01:intron 15.0%
!!! TAAGAAAACAAATTTAGTTT+AGG - Chr1:100190820-100190839 None:intergenic 15.0%
!!! TATTGTTTTTCTTAAATCTA+AGG + Chr1:100194925-100194944 MsG0180006103.01.T01:intron 15.0%
!!! TTCACATTATATTTTCTATA+TGG + Chr1:100189681-100189700 MsG0180006103.01.T01:intron 15.0%
!! AAAACAAATCACACAATAAT+AGG - Chr1:100194397-100194416 None:intergenic 20.0%
!! AAAATAAATATGAAACTGTC+AGG - Chr1:100194985-100195004 None:intergenic 20.0%
!! AAACAAACATACATATTGAA+TGG - Chr1:100195306-100195325 None:intergenic 20.0%
!! AAAGAAACAAATTATAGTCA+AGG - Chr1:100190565-100190584 None:intergenic 20.0%
!! AAATCACAACAAACTAAAAT+TGG + Chr1:100188946-100188965 MsG0180006103.01.T01:intron 20.0%
!! AAATTCCCTAACTTTAAATT+TGG - Chr1:100196231-100196250 None:intergenic 20.0%
!! AACAAACATACATATTGAAT+GGG - Chr1:100195305-100195324 None:intergenic 20.0%
!! AACTTAAATGTTCCATAAAA+AGG - Chr1:100191875-100191894 None:intergenic 20.0%
!! AACTTATACCTCAATTAAAA+AGG + Chr1:100192739-100192758 MsG0180006103.01.T01:intron 20.0%
!! AAGTAAGAATCAATACATAT+AGG - Chr1:100191246-100191265 None:intergenic 20.0%
!! AATAAAAATAAAAATGGGAC+AGG - Chr1:100196574-100196593 None:intergenic 20.0%
!! AATTGAAATTATTTGTGGTT+AGG + Chr1:100197036-100197055 MsG0180006103.01.T01:intron 20.0%
!! ACTTAAATGTTCCATAAAAA+GGG - Chr1:100191874-100191893 None:intergenic 20.0%
!! AGATAAATTAAACTTAGTAG+AGG - Chr1:100194200-100194219 None:intergenic 20.0%
!! ATCAGTATTCTAGATATTTA+TGG + Chr1:100193322-100193341 MsG0180006103.01.T01:CDS 20.0%
!! ATTGAAATTATTTGTGGTTA+GGG + Chr1:100197037-100197056 MsG0180006103.01.T01:intron 20.0%
!! ATTTAGAAAGAAAACTTGAT+TGG + Chr1:100193056-100193075 MsG0180006103.01.T01:intron 20.0%
!! ATTTATTTAGATCTAAACTC+TGG + Chr1:100196908-100196927 MsG0180006103.01.T01:intron 20.0%
!! CATGAAAACATCTTATAAAA+AGG - Chr1:100190378-100190397 None:intergenic 20.0%
!! CGTATATCTAAATAAAAGAA+AGG - Chr1:100190196-100190215 None:intergenic 20.0%
!! CGTGGAAATAAAAATAAAAA+TGG - Chr1:100196580-100196599 None:intergenic 20.0%
!! CTTATAATCTACATATATAG+TGG + Chr1:100191042-100191061 MsG0180006103.01.T01:five_prime_UTR 20.0%
!! GAATAATCAGTAAAACAAAA+AGG - Chr1:100190347-100190366 None:intergenic 20.0%
!! TCAATGTTTAGATACTAAAT+TGG - Chr1:100193121-100193140 None:intergenic 20.0%
!! TCATTACATTATCTTCATAA+TGG - Chr1:100197168-100197187 None:intergenic 20.0%
!! TTAAAAAGTTATGGAATTTC+TGG + Chr1:100197082-100197101 MsG0180006103.01.T01:intron 20.0%
!! TTCAAATTTCTTATAGTATG+TGG - Chr1:100194451-100194470 None:intergenic 20.0%
!! TTCTCATGTTTATAGATAAT+AGG + Chr1:100189515-100189534 MsG0180006103.01.T01:intron 20.0%
!!! AACAAAATCCTTTTTAATTG+AGG - Chr1:100192750-100192769 None:intergenic 20.0%
!!! AATGTATTTGTTACATACAA+TGG + Chr1:100191758-100191777 MsG0180006103.01.T01:intron 20.0%
!!! ACCTTTAAAACCTATTATTA+AGG - Chr1:100189742-100189761 None:intergenic 20.0%
!!! AGAAAACAAATTTAGTTTAG+GGG - Chr1:100190818-100190837 None:intergenic 20.0%
!!! ATACCTTTTCAAAAAGATTA+AGG - Chr1:100193979-100193998 None:intergenic 20.0%
!!! ATATTTATTTTTTTCCGATC+AGG + Chr1:100194994-100195013 MsG0180006103.01.T01:intron 20.0%
!!! CCTTTAAAACCTATTATTAA+GGG - Chr1:100189741-100189760 None:intergenic 20.0%
!!! CTTTAAAACCTATTATTAAG+GGG - Chr1:100189740-100189759 None:intergenic 20.0%
!!! GAATGAGTTTTGTTAAAATT+TGG + Chr1:100193630-100193649 MsG0180006103.01.T01:intron 20.0%
!!! TATATGTATTGATTCTTACT+TGG + Chr1:100191245-100191264 MsG0180006103.01.T01:intron 20.0%
!!! TGAAAAAGTATTTTAAGTTC+AGG + Chr1:100190728-100190747 MsG0180006103.01.T01:intron 20.0%
!!! TGGTATGTCTTTTAATATTT+TGG + Chr1:100192394-100192413 MsG0180006103.01.T01:intron 20.0%
!!! TTCTGAGAAAATATATTTTC+TGG + Chr1:100195417-100195436 MsG0180006103.01.T01:intron 20.0%
!!! TTGATTGAATATTTGGAATT+TGG + Chr1:100194087-100194106 MsG0180006103.01.T01:intron 20.0%
!!! TTTAAAACCTATTATTAAGG+GGG - Chr1:100189739-100189758 None:intergenic 20.0%
!!! TTTATTGAACATTTTGTTTG+TGG + Chr1:100191790-100191809 MsG0180006103.01.T01:intron 20.0%
! AAAAACAAAACAAAAAGGCA+TGG - Chr1:100194840-100194859 None:intergenic 25.0%
! AAAAACTAAAAATCCCACAT+TGG - Chr1:100194038-100194057 None:intergenic 25.0%
! AAACATTTGACATGATTAGT+TGG - Chr1:100191471-100191490 None:intergenic 25.0%
! AAACTGAGAGAAAATGAAAA+AGG + Chr1:100195383-100195402 MsG0180006103.01.T01:intron 25.0%
! AAATTTATCATGAAATGGTC+TGG + Chr1:100195252-100195271 MsG0180006103.01.T01:intron 25.0%
! AACTTTCTTAAAGGGATTTA+CGG - Chr1:100190009-100190028 None:intergenic 25.0%
! AAGGTATAGCTTAAAACAAA+TGG - Chr1:100190246-100190265 None:intergenic 25.0%
! AATATAGTTAGTACCATACA+GGG - Chr1:100190033-100190052 None:intergenic 25.0%
! AATCTCAAGTAAGACTTAAA+TGG - Chr1:100190509-100190528 None:intergenic 25.0%
! AATTCTAATTCATGCTTCAA+AGG + Chr1:100194602-100194621 MsG0180006103.01.T01:CDS 25.0%
! ACATATGTAAGCAATAGTTA+TGG - Chr1:100192666-100192685 None:intergenic 25.0%
! ACTAAATTGGATTTCTTAGA+AGG - Chr1:100193108-100193127 None:intergenic 25.0%
! AGAAACTTAGTATATGGTAA+TGG + Chr1:100196992-100197011 MsG0180006103.01.T01:intron 25.0%
! ATCAATCCAGTTTACTATTT+AGG - Chr1:100189107-100189126 None:intergenic 25.0%
! ATTAGTATCAAACTTGAACT+CGG - Chr1:100188529-100188548 None:intergenic 25.0%
! ATTCATAACAAAGAAGTTGT+TGG - Chr1:100193664-100193683 None:intergenic 25.0%
! CATATAAAATACTTATGCAG+CGG - Chr1:100192708-100192727 None:intergenic 25.0%
! CATATGAACGAAAAATAAAG+AGG - Chr1:100192551-100192570 None:intergenic 25.0%
! CATGAATGGGTAAAAAAAAA+AGG - Chr1:100197647-100197666 None:intergenic 25.0%
! CTCCAAAATTTATCATGAAA+TGG + Chr1:100195247-100195266 MsG0180006103.01.T01:intron 25.0%
! CTGACCTTATAATTATTGAT+TGG - Chr1:100190309-100190328 None:intergenic 25.0%
! CTTACATCATAACTTTACAA+GGG - Chr1:100192603-100192622 None:intergenic 25.0%
! GAATCAATACATATAGGATT+AGG - Chr1:100191240-100191259 None:intergenic 25.0%
! GATATTGCATGAACATAAAT+TGG - Chr1:100191591-100191610 None:intergenic 25.0%
! TAAAAGAACTAATAGCTGAA+AGG - Chr1:100195706-100195725 None:intergenic 25.0%
! TAATTTGATTGAACGTTACA+GGG + Chr1:100191326-100191345 MsG0180006103.01.T01:intron 25.0%
! TATAAAATGCACAGAATTCA+AGG - Chr1:100193439-100193458 None:intergenic 25.0%
! TATACAAACTGGAATTTACT+AGG + Chr1:100188903-100188922 MsG0180006103.01.T01:intron 25.0%
! TATATGGATCAGAGATAATA+CGG + Chr1:100190159-100190178 MsG0180006103.01.T01:intron 25.0%
! TCATATCAAAGAAATTGAGA+AGG - Chr1:100189442-100189461 None:intergenic 25.0%
! TCTTACATCATAACTTTACA+AGG - Chr1:100192604-100192623 None:intergenic 25.0%
! TTAAATAACTAAGTTGCATG+AGG - Chr1:100189819-100189838 None:intergenic 25.0%
! TTGTAAATTACCTTAAGACA+TGG + Chr1:100194727-100194746 MsG0180006103.01.T01:intron 25.0%
!! AATTTTCTTGAATGAAGTGA+TGG + Chr1:100190647-100190666 MsG0180006103.01.T01:intron 25.0%
!! ACTGCAATTCTAATTTTCTA+GGG + Chr1:100188870-100188889 MsG0180006103.01.T01:intron 25.0%
!! ACTTTAAATTTGGAGTTCAT+TGG - Chr1:100196221-100196240 None:intergenic 25.0%
!! ATATATTTTCTCAGAATCAG+AGG - Chr1:100195413-100195432 None:intergenic 25.0%
!! CGGATGAATTTTATAAGTTA+TGG + Chr1:100190214-100190233 MsG0180006103.01.T01:intron 25.0%
!! GAACTCCAAATTTAAAGTTA+GGG + Chr1:100196223-100196242 MsG0180006103.01.T01:intron 25.0%
!! GACCATTTCATGATAAATTT+TGG - Chr1:100195252-100195271 None:intergenic 25.0%
!! GTTCATAAATGTTTTGTGAT+TGG - Chr1:100189942-100189961 None:intergenic 25.0%
!! TATCTTCATAATGGAATCAT+GGG - Chr1:100197159-100197178 None:intergenic 25.0%
!! TGAACTCCAAATTTAAAGTT+AGG + Chr1:100196222-100196241 MsG0180006103.01.T01:intron 25.0%
!! TTAATTTGATTGAACGTTAC+AGG + Chr1:100191325-100191344 MsG0180006103.01.T01:intron 25.0%
!! TTATCTTCATAATGGAATCA+TGG - Chr1:100197160-100197179 None:intergenic 25.0%
!!! ACTTTTAAGTTGAAAACTAC+AGG - Chr1:100196877-100196896 None:intergenic 25.0%
!!! CCCTTAATAATAGGTTTTAA+AGG + Chr1:100189738-100189757 MsG0180006103.01.T01:intron 25.0%
!!! CTCTTTATTTTTCGTTCATA+TGG + Chr1:100192549-100192568 MsG0180006103.01.T01:intron 25.0%
!!! GAAAAAGTTGCAGTTTTTTA+AGG + Chr1:100192522-100192541 MsG0180006103.01.T01:intron 25.0%
!!! GTTAATTTTTTTAACTACGC+AGG + Chr1:100193186-100193205 MsG0180006103.01.T01:intron 25.0%
!!! TCAGTTTTAGTTCTAATACA+TGG - Chr1:100193786-100193805 None:intergenic 25.0%
!!! TCTCCTAGTAGTTTTATTTT+AGG + Chr1:100196934-100196953 MsG0180006103.01.T01:intron 25.0%
AAAAATAGCAATGCAATACC+TGG + Chr1:100191095-100191114 MsG0180006103.01.T01:five_prime_UTR 30.0%
AAAATTAACAGACTGGCATA+TGG - Chr1:100193018-100193037 None:intergenic 30.0%
AAACATACATATTGAATGGG+AGG - Chr1:100195302-100195321 None:intergenic 30.0%
AAAGGTGAAAGATGAAGATT+TGG + Chr1:100189756-100189775 MsG0180006103.01.T01:five_prime_UTR 30.0%
AAAGTTGTTGAAACAAGATG+AGG - Chr1:100193716-100193735 None:intergenic 30.0%
AAATAAAAATGGGACAGGTT+TGG - Chr1:100196569-100196588 None:intergenic 30.0%
AAGCCAGATAGACAAATATA+AGG - Chr1:100191898-100191917 None:intergenic 30.0%
AAGTTGTTGAAACAAGATGA+GGG - Chr1:100193715-100193734 None:intergenic 30.0%
AATAAAAATGGGACAGGTTT+GGG - Chr1:100196568-100196587 None:intergenic 30.0%
AATCCAGTTTACTATTTAGG+AGG - Chr1:100189104-100189123 None:intergenic 30.0%
AATGACAAGTAAATCCTAGA+CGG - Chr1:100197293-100197312 None:intergenic 30.0%
AGAGGAGTAAATAAAGTTCA+AGG - Chr1:100197382-100197401 None:intergenic 30.0%
AGTGAAACTGGAAAAATATC+TGG + Chr1:100191371-100191390 MsG0180006103.01.T01:five_prime_UTR 30.0%
ATAAACAAATCACTAGCTGT+TGG + Chr1:100193277-100193296 MsG0180006103.01.T01:CDS 30.0%
ATAGAATCACCACTTATTCA+AGG - Chr1:100191820-100191839 None:intergenic 30.0%
ATATAGGATGCAAATATCTG+AGG - Chr1:100195112-100195131 None:intergenic 30.0%
ATATAGTTAGTACCATACAG+GGG - Chr1:100190032-100190051 None:intergenic 30.0%
ATATGGATCAGAGATAATAC+GGG + Chr1:100190160-100190179 MsG0180006103.01.T01:intron 30.0%
ATCACACAATAATAGGATTG+AGG - Chr1:100194390-100194409 None:intergenic 30.0%
ATCTACTTAACCCTAATTCA+TGG - Chr1:100195584-100195603 None:intergenic 30.0%
ATCTTCATTAGCATATACGA+CGG - Chr1:100188744-100188763 None:intergenic 30.0%
ATTTGTAGAATGTTGAGGAT+TGG + Chr1:100189128-100189147 MsG0180006103.01.T01:intron 30.0%
CAATATAGTTAGTACCATAC+AGG - Chr1:100190034-100190053 None:intergenic 30.0%
CAATCGTCATTTATTCAAGT+TGG + Chr1:100193521-100193540 MsG0180006103.01.T01:CDS 30.0%
CAGTGAAGAAACTTAGTATA+TGG + Chr1:100196986-100197005 MsG0180006103.01.T01:intron 30.0%
CATTGATCAGATGAAAATAC+TGG - Chr1:100189273-100189292 None:intergenic 30.0%
CGTATATGCTAATGAAGATT+CGG + Chr1:100188745-100188764 MsG0180006103.01.T01:five_prime_UTR 30.0%
CTGATGCTTGATTGAATATT+TGG + Chr1:100194080-100194099 MsG0180006103.01.T01:intron 30.0%
CTGTAATTGCATAAACATGA+GGG - Chr1:100190085-100190104 None:intergenic 30.0%
CTTAGAAGGAAAACTTAATG+AGG - Chr1:100193094-100193113 None:intergenic 30.0%
CTTAGTTGTTACAAACTAGA+AGG + Chr1:100195727-100195746 MsG0180006103.01.T01:intron 30.0%
CTTCATTTAGCATACTATGA+TGG + Chr1:100192417-100192436 MsG0180006103.01.T01:intron 30.0%
GACACTTATGATAATTGACA+TGG + Chr1:100195680-100195699 MsG0180006103.01.T01:intron 30.0%
GCTATTGAACTACATATTTG+TGG + Chr1:100194272-100194291 MsG0180006103.01.T01:intron 30.0%
GGAAATACATCCATGAATTA+GGG + Chr1:100195571-100195590 MsG0180006103.01.T01:intron 30.0%
GGATTAGGATAAAATATGCA+GGG + Chr1:100190668-100190687 MsG0180006103.01.T01:intron 30.0%
GGTTAGTGTGTTAACTAATA+TGG - Chr1:100194819-100194838 None:intergenic 30.0%
GTATTCAGCTTACATAGATA+TGG + Chr1:100196961-100196980 MsG0180006103.01.T01:intron 30.0%
GTGAAGATAATATCAACTTC+TGG + Chr1:100189613-100189632 MsG0180006103.01.T01:five_prime_UTR 30.0%
GTGCCTAAAATAAAACTACT+AGG - Chr1:100196940-100196959 None:intergenic 30.0%
GTTCCTTATATTTGTCTATC+TGG + Chr1:100191892-100191911 MsG0180006103.01.T01:intron 30.0%
TAAAATACCTTGCAATGCAT+TGG - Chr1:100195756-100195775 None:intergenic 30.0%
TAAGTTCAGGAATGAATGAT+TGG + Chr1:100190741-100190760 MsG0180006103.01.T01:intron 30.0%
TAATATGTGAGGTCGAAAAA+AGG - Chr1:100194333-100194352 None:intergenic 30.0%
TAATGAACATAATCCACCAA+AGG - Chr1:100196167-100196186 None:intergenic 30.0%
TACAATGAGAATGCTTACTA+AGG - Chr1:100190591-100190610 None:intergenic 30.0%
TACTTATCCCCCTTAATAAT+AGG + Chr1:100189729-100189748 MsG0180006103.01.T01:intron 30.0%
TAGCTTAAAACAAATGGAAG+TGG - Chr1:100190240-100190259 None:intergenic 30.0%
TATAAACTGTCCATGTCTTA+AGG - Chr1:100194740-100194759 None:intergenic 30.0%
TATATTTATCAGCTATGTGC+TGG + Chr1:100191685-100191704 MsG0180006103.01.T01:intron 30.0%
TATGACATGTCGAAAGAATT+AGG - Chr1:100197597-100197616 None:intergenic 30.0%
TATGCAGGGAAATATGAAAA+AGG + Chr1:100190682-100190701 MsG0180006103.01.T01:intron 30.0%
TCAACTCGAAAAATGAAAGT+TGG + Chr1:100192844-100192863 MsG0180006103.01.T01:CDS 30.0%
TCACATATTAGGATAAGACT+TGG + Chr1:100194343-100194362 MsG0180006103.01.T01:intron 30.0%
TCGTTTAATTCAAATTGCTG+TGG + Chr1:100196818-100196837 MsG0180006103.01.T01:intron 30.0%
TCTGTAATTGCATAAACATG+AGG - Chr1:100190086-100190105 None:intergenic 30.0%
TGAAAATGGTGCAATAGTAA+GGG + Chr1:100188623-100188642 MsG0180006103.01.T01:five_prime_UTR 30.0%
TGATACATACATCACTGTAA+TGG + Chr1:100194113-100194132 MsG0180006103.01.T01:intron 30.0%
TGATATTAATGAGAAGCAAC+AGG - Chr1:100190944-100190963 None:intergenic 30.0%
TGCTTCAAAGAAGGTAATTT+AGG + Chr1:100188841-100188860 MsG0180006103.01.T01:intron 30.0%
TGGAAATACATCCATGAATT+AGG + Chr1:100195570-100195589 MsG0180006103.01.T01:intron 30.0%
TGTGACTTCTGCAATTATTA+CGG + Chr1:100190414-100190433 MsG0180006103.01.T01:intron 30.0%
TTAATGCAGCGAATAAAATG+AGG - Chr1:100196356-100196375 None:intergenic 30.0%
TTAGTATCAAACTTGAACTC+GGG - Chr1:100188528-100188547 None:intergenic 30.0%
TTCCTCTTCACTAATTTACA+AGG - Chr1:100192479-100192498 None:intergenic 30.0%
TTCCTTGTAAATTAGTGAAG+AGG + Chr1:100192474-100192493 MsG0180006103.01.T01:intron 30.0%
TTGTGGTTAGGGTTATATTT+GGG + Chr1:100197048-100197067 MsG0180006103.01.T01:intron 30.0%
TTTAATTCAAATTGCTGTGG+TGG + Chr1:100196821-100196840 MsG0180006103.01.T01:intron 30.0%
TTTACTCATGTCTGTTTGAT+TGG + Chr1:100193242-100193261 MsG0180006103.01.T01:CDS 30.0%
TTTCATATGGCCAAGATATA+AGG + Chr1:100194168-100194187 MsG0180006103.01.T01:intron 30.0%
TTTGATACTAATCGAAACAC+TGG + Chr1:100188537-100188556 MsG0180006103.01.T01:five_prime_UTR 30.0%
TTTGATTGTATCTATGTTGC+AGG - Chr1:100189864-100189883 None:intergenic 30.0%
TTTGATTGTGCTTCAATACT+TGG + Chr1:100194882-100194901 MsG0180006103.01.T01:intron 30.0%
TTTGTGGTTAGGGTTATATT+TGG + Chr1:100197047-100197066 MsG0180006103.01.T01:intron 30.0%
TTTGTTCCTGACTTCTTAAA+GGG + Chr1:100192764-100192783 MsG0180006103.01.T01:intron 30.0%
! AACTATCTATTTCTTGCTGT+GGG + Chr1:100194419-100194438 MsG0180006103.01.T01:intron 30.0%
! AAGTCTTATCCTAATATGTG+AGG - Chr1:100194344-100194363 None:intergenic 30.0%
! AATGAATGATTGGTTAACAG+CGG + Chr1:100190751-100190770 MsG0180006103.01.T01:intron 30.0%
! ATACTGAGTATCCCTTTTTA+TGG + Chr1:100191860-100191879 MsG0180006103.01.T01:intron 30.0%
! ATTCTGTGCATTTTATACAG+AGG + Chr1:100193442-100193461 MsG0180006103.01.T01:intron 30.0%
! CAATGTTTTTCCATTACCAA+AGG - Chr1:100191184-100191203 None:intergenic 30.0%
! CACATGAACTTTTTAATACC+AGG + Chr1:100192142-100192161 MsG0180006103.01.T01:intron 30.0%
! CATGCTTACAAATTTGTTTC+AGG + Chr1:100193895-100193914 MsG0180006103.01.T01:intron 30.0%
! CTTACTCCTTGTTTAATAAG+AGG + Chr1:100190455-100190474 MsG0180006103.01.T01:intron 30.0%
! GACTGCAATTCTAATTTTCT+AGG + Chr1:100188869-100188888 MsG0180006103.01.T01:intron 30.0%
! GTGGTAGAACTAACTTTTAA+GGG + Chr1:100194762-100194781 MsG0180006103.01.T01:intron 30.0%
! TAGTTGGATAACTGATGTTT+TGG + Chr1:100195275-100195294 MsG0180006103.01.T01:intron 30.0%
! TATACCTTTTCGCAAACTTT+TGG - Chr1:100196502-100196521 None:intergenic 30.0%
! TGAAAGTATAGTGAGTTATG+CGG - Chr1:100194236-100194255 None:intergenic 30.0%
! TGAGATTTTGAACTGAAATG+TGG + Chr1:100190522-100190541 MsG0180006103.01.T01:intron 30.0%
! TGATGATTTGTAGAATGTTG+AGG + Chr1:100189123-100189142 MsG0180006103.01.T01:intron 30.0%
! TGGATTAGGATAAAATATGC+AGG + Chr1:100190667-100190686 MsG0180006103.01.T01:intron 30.0%
! TGTGGTAGAACTAACTTTTA+AGG + Chr1:100194761-100194780 MsG0180006103.01.T01:intron 30.0%
! TTTTCCAACAAAACTGTTCA+AGG - Chr1:100191536-100191555 None:intergenic 30.0%
! TTTTGTTCCTGACTTCTTAA+AGG + Chr1:100192763-100192782 MsG0180006103.01.T01:intron 30.0%
!! ATCTATTTCTACATCCTCTA+GGG + Chr1:100188790-100188809 MsG0180006103.01.T01:five_prime_UTR 30.0%
!! ATTACCTTCTTTGAAGCATA+AGG - Chr1:100188839-100188858 None:intergenic 30.0%
!! ATTATTTCTGCTCTGTGTAA+TGG + Chr1:100192110-100192129 MsG0180006103.01.T01:intron 30.0%
!! CTGCCTTAATCTTTTTGAAA+AGG + Chr1:100193973-100193992 MsG0180006103.01.T01:CDS 30.0%
!! GATTAGTTGGAAAGTTTTAG+TGG - Chr1:100191458-100191477 None:intergenic 30.0%
!! TCATTTATTCAAGTTGGAAC+AGG + Chr1:100193527-100193546 MsG0180006103.01.T01:CDS 30.0%
!! TTAAGCAGTCTGTTTCTATA+TGG - Chr1:100193562-100193581 None:intergenic 30.0%
!!! ATATTTTTTAACCATCAGCC+TGG + Chr1:100197198-100197217 MsG0180006103.01.T01:intron 30.0%
!!! TTAGGTCTCTGTTTTTTTCT+AGG - Chr1:100195042-100195061 None:intergenic 30.0%
!!! TTGAACAGTTTTGTTGGAAA+AGG + Chr1:100191535-100191554 MsG0180006103.01.T01:intron 30.0%
!!! TTTTTTCGACCTCACATATT+AGG + Chr1:100194332-100194351 MsG0180006103.01.T01:intron 30.0%
AAAAAGACACTGCAAACAAG+AGG - Chr1:100197400-100197419 None:intergenic 35.0%
AAAAGGAAAGAATGGCTACA+AGG - Chr1:100194316-100194335 None:intergenic 35.0%
AAAATTGTGCAGAAACCACT+GGG + Chr1:100194497-100194516 MsG0180006103.01.T01:intron 35.0%
AAAGGAAAGAATGGCTACAA+GGG - Chr1:100194315-100194334 None:intergenic 35.0%
AAATACTAGCTACCACTTAC+TGG + Chr1:100195550-100195569 MsG0180006103.01.T01:intron 35.0%
AAATCATGTTCAAGCTGTTG+AGG + Chr1:100192274-100192293 MsG0180006103.01.T01:CDS 35.0%
AACTCCTTATGCTTCAAAGA+AGG + Chr1:100188832-100188851 MsG0180006103.01.T01:intron 35.0%
AAGTACAGTTATCAGACCAA+AGG - Chr1:100189714-100189733 None:intergenic 35.0%
AATAGTAAGGGAGGTTTCTA+AGG + Chr1:100188635-100188654 MsG0180006103.01.T01:five_prime_UTR 35.0%
AATCCAATACTAGAAGCCTT+TGG + Chr1:100191165-100191184 MsG0180006103.01.T01:five_prime_UTR 35.0%
AATGTTAAATCCGTACCGTT+TGG - Chr1:100194557-100194576 None:intergenic 35.0%
ACAAAATTGTTCTTCCGAAC+AGG + Chr1:100196749-100196768 MsG0180006103.01.T01:CDS 35.0%
ACAAACCTAATGCATCACTA+GGG - Chr1:100193159-100193178 None:intergenic 35.0%
ACATCATAACTTTACAAGGG+CGG - Chr1:100192600-100192619 None:intergenic 35.0%
ACCAACAGAAAATGAGTATG+TGG - Chr1:100190843-100190862 None:intergenic 35.0%
ACTGATCTGATTGGATCAAA+TGG + Chr1:100188597-100188616 MsG0180006103.01.T01:five_prime_UTR 35.0%
ACTGGACCTCTTATTAAACA+AGG - Chr1:100190464-100190483 None:intergenic 35.0%
AGAACGTTTAAACACTCAAG+CGG - Chr1:100190792-100190811 None:intergenic 35.0%
AGAAGAATTTCGCATAGTCA+CGG + Chr1:100192013-100192032 MsG0180006103.01.T01:five_prime_UTR 35.0%
AGGTCGAAAAAAGGAAAGAA+TGG - Chr1:100194324-100194343 None:intergenic 35.0%
AGTTGTTGAAACAAGATGAG+GGG - Chr1:100193714-100193733 None:intergenic 35.0%
ATAAAAATGGGACAGGTTTG+GGG - Chr1:100196567-100196586 None:intergenic 35.0%
ATAAAGTTCAAGGTTGAGCT+TGG - Chr1:100197372-100197391 None:intergenic 35.0%
ATAATTGCAGAAGTCACAAC+TGG - Chr1:100190412-100190431 None:intergenic 35.0%
ATACAGGGGAACTTTCTTAA+AGG - Chr1:100190018-100190037 None:intergenic 35.0%
ATACTAGAAGCCTTTGGTAA+TGG + Chr1:100191171-100191190 MsG0180006103.01.T01:five_prime_UTR 35.0%
ATAGCAACAGAAACACTAAG+TGG - Chr1:100196683-100196702 None:intergenic 35.0%
ATATAAAGACCCTCAAGAAC+AGG - Chr1:100191271-100191290 None:intergenic 35.0%
ATCAATCTCTTGCAAATGCA+AGG - Chr1:100195971-100195990 None:intergenic 35.0%
ATGGATGTATTTCCAGTAAG+TGG - Chr1:100195565-100195584 None:intergenic 35.0%
ATGGTGAATCATTTGAAGAC+AGG + Chr1:100188718-100188737 MsG0180006103.01.T01:five_prime_UTR 35.0%
ATGTAGTGTTAAGCTTTCAG+TGG - Chr1:100193857-100193876 None:intergenic 35.0%
ATTCCCAGACAATAAGAGAA+AGG - Chr1:100196610-100196629 None:intergenic 35.0%
ATTTCCAGAATCTCTACTGA+TGG + Chr1:100192309-100192328 MsG0180006103.01.T01:intron 35.0%
ATTTGCTTGAGGATAGAAGT+TGG - Chr1:100195081-100195100 None:intergenic 35.0%
CAAAAAGATTAAGGCAGTCT+TGG - Chr1:100193970-100193989 None:intergenic 35.0%
CAAAATTGTTCTTCCGAACA+GGG + Chr1:100196750-100196769 MsG0180006103.01.T01:CDS 35.0%
CAACAAAACTGTTCAAGGTT+TGG - Chr1:100191531-100191550 None:intergenic 35.0%
CACAATCACTTGCTTTCATA+TGG + Chr1:100194155-100194174 MsG0180006103.01.T01:intron 35.0%
CAGAAGTTGCAAAATTTGCA+TGG - Chr1:100195624-100195643 None:intergenic 35.0%
CATCTGATCAATGTATCCTT+TGG + Chr1:100189280-100189299 MsG0180006103.01.T01:intron 35.0%
CCTCTAATAACTGCATGAAT+GGG - Chr1:100197660-100197679 None:intergenic 35.0%
CTAGAGGATGTAGAAATAGA+TGG - Chr1:100188791-100188810 None:intergenic 35.0%
CTATAGATGAGGACTAGATA+GGG - Chr1:100194015-100194034 None:intergenic 35.0%
CTTGCATCAACATGTTTCTT+AGG + Chr1:100188995-100189014 MsG0180006103.01.T01:intron 35.0%
CTTGGCTTCAACTTTCTAAT+GGG + Chr1:100189578-100189597 MsG0180006103.01.T01:five_prime_UTR 35.0%
GAAAGAATTAGGTGGAGTAA+AGG - Chr1:100197586-100197605 None:intergenic 35.0%
GACATGGACAGTTTATAATG+TGG + Chr1:100194743-100194762 MsG0180006103.01.T01:intron 35.0%
GATGTAGAAATAGATGGTTG+AGG - Chr1:100188785-100188804 None:intergenic 35.0%
GCAAATCCTGATATTCTTGA+TGG + Chr1:100189784-100189803 MsG0180006103.01.T01:five_prime_UTR 35.0%
GCATTGCAAATACATTCTCT+TGG - Chr1:100192202-100192221 None:intergenic 35.0%
GCGTTATAAGTTCTTTCTGT+TGG + Chr1:100196282-100196301 MsG0180006103.01.T01:intron 35.0%
GCTACAAGGGAAATTTAAAC+AGG - Chr1:100194302-100194321 None:intergenic 35.0%
GTGAAAATGGTGCAATAGTA+AGG + Chr1:100188622-100188641 MsG0180006103.01.T01:five_prime_UTR 35.0%
GTGTAATTCAGACAAAAGCA+GGG + Chr1:100189970-100189989 MsG0180006103.01.T01:intron 35.0%
TACAGGGGAACTTTCTTAAA+GGG - Chr1:100190017-100190036 None:intergenic 35.0%
TACATATATAGTGGTGAGAG+TGG + Chr1:100191051-100191070 MsG0180006103.01.T01:five_prime_UTR 35.0%
TAGCCAACTTGATACATTTC+AGG - Chr1:100196728-100196747 None:intergenic 35.0%
TAGGAATGCAGTTGTATCAT+AGG - Chr1:100195023-100195042 None:intergenic 35.0%
TATAAAGTTCAACGCCATGA+TGG + Chr1:100195895-100195914 MsG0180006103.01.T01:intron 35.0%
TATGGATCAGAGATAATACG+GGG + Chr1:100190161-100190180 MsG0180006103.01.T01:intron 35.0%
TCAACTTTCTAATGGGGATT+GGG + Chr1:100189585-100189604 MsG0180006103.01.T01:five_prime_UTR 35.0%
TCAAGAATATCAGGATTTGC+TGG - Chr1:100189784-100189803 None:intergenic 35.0%
TCCTCTAATAACTGCATGAA+TGG - Chr1:100197661-100197680 None:intergenic 35.0%
TCTGATGAAGAATCTCCATA+TGG + Chr1:100188690-100188709 MsG0180006103.01.T01:five_prime_UTR 35.0%
TCTTGGCTTCAACTTTCTAA+TGG + Chr1:100189577-100189596 MsG0180006103.01.T01:five_prime_UTR 35.0%
TGACCTTTCTCTTATTGTCT+GGG + Chr1:100196604-100196623 MsG0180006103.01.T01:intron 35.0%
TGCAATTATTACGGAAAGAC+TGG + Chr1:100190423-100190442 MsG0180006103.01.T01:intron 35.0%
TGCAGGTTGTATAAAACTGA+CGG - Chr1:100189847-100189866 None:intergenic 35.0%
TGGAGGACTATAAATATCTG+AGG + Chr1:100191952-100191971 MsG0180006103.01.T01:five_prime_UTR 35.0%
TGGGAATGGTAATTCAGATA+TGG + Chr1:100196623-100196642 MsG0180006103.01.T01:intron 35.0%
TGTGGATATCCTTGAATAAG+TGG + Chr1:100191808-100191827 MsG0180006103.01.T01:intron 35.0%
TGTGTAATTCAGACAAAAGC+AGG + Chr1:100189969-100189988 MsG0180006103.01.T01:intron 35.0%
TTACCAAAGGCTTCTAGTAT+TGG - Chr1:100191171-100191190 None:intergenic 35.0%
TTCAACTTTCTAATGGGGAT+TGG + Chr1:100189584-100189603 MsG0180006103.01.T01:five_prime_UTR 35.0%
TTCGACATGTCATATTCCTT+GGG + Chr1:100197603-100197622 MsG0180006103.01.T01:CDS 35.0%
TTGCCTCCTAAATAGTAAAC+TGG + Chr1:100189098-100189117 MsG0180006103.01.T01:intron 35.0%
TTGCCTGAAATGTATCAAGT+TGG + Chr1:100196722-100196741 MsG0180006103.01.T01:CDS 35.0%
TTGGCTTCAACTTTCTAATG+GGG + Chr1:100189579-100189598 MsG0180006103.01.T01:five_prime_UTR 35.0%
TTTAAGAAAGTTCCCCTGTA+TGG + Chr1:100190017-100190036 MsG0180006103.01.T01:five_prime_UTR 35.0%
TTTCAGGAATACATCCAAGA+CGG + Chr1:100193911-100193930 MsG0180006103.01.T01:intron 35.0%
TTTCGACATGTCATATTCCT+TGG + Chr1:100197602-100197621 MsG0180006103.01.T01:CDS 35.0%
TTTCTCTTATTGTCTGGGAA+TGG + Chr1:100196609-100196628 MsG0180006103.01.T01:intron 35.0%
TTTGTACACGTAAAATGCCA+TGG - Chr1:100197485-100197504 None:intergenic 35.0%
! AAACAGGTTCTACTCTTTTC+TGG - Chr1:100195924-100195943 None:intergenic 35.0%
! AAGAAGCTTTATGTCCATCA+AGG - Chr1:100190914-100190933 None:intergenic 35.0%
! AAGTGTTGCCACAAAATTCA+AGG + Chr1:100195201-100195220 MsG0180006103.01.T01:intron 35.0%
! ACCACATACTCATTTTCTGT+TGG + Chr1:100190839-100190858 MsG0180006103.01.T01:intron 35.0%
! ACGTGTACAAAGTTGCTTTA+GGG + Chr1:100197494-100197513 MsG0180006103.01.T01:CDS 35.0%
! AGCTTGGTGATTGAATTACT+TGG - Chr1:100197356-100197375 None:intergenic 35.0%
! AGCTTTTGCATAACAAGTAG+TGG - Chr1:100192355-100192374 None:intergenic 35.0%
! GAACTATCTATTTCTTGCTG+TGG + Chr1:100194418-100194437 MsG0180006103.01.T01:intron 35.0%
! GGTTTGTACCTTGAATTTTG+TGG - Chr1:100195212-100195231 None:intergenic 35.0%
! GTTGGTTTCCTAAACATTCA+CGG + Chr1:100190857-100190876 MsG0180006103.01.T01:intron 35.0%
! TACGTGTACAAAGTTGCTTT+AGG + Chr1:100197493-100197512 MsG0180006103.01.T01:CDS 35.0%
! TCTATATGGATTGCATCCTT+TGG + Chr1:100189695-100189714 MsG0180006103.01.T01:intron 35.0%
! TGTTGATTATGACTGCAGAT+TGG + Chr1:100197429-100197448 MsG0180006103.01.T01:intron 35.0%
! TTCAATAGCTTTACGCTTGT+AGG - Chr1:100190060-100190079 None:intergenic 35.0%
! TTCTAGTTGGAAATCCTGAT+CGG - Chr1:100196472-100196491 None:intergenic 35.0%
! TTTTGGTGAGACATTCTAGT+TGG - Chr1:100196485-100196504 None:intergenic 35.0%
! TTTTTAATACCAGGATGCTC+TGG + Chr1:100192151-100192170 MsG0180006103.01.T01:intron 35.0%
!! AGTTGGAAAGTTTTAGTGGA+AGG - Chr1:100191454-100191473 None:intergenic 35.0%
!! CAAACCTTGAACAGTTTTGT+TGG + Chr1:100191529-100191548 MsG0180006103.01.T01:intron 35.0%
!! CATCTATTTCTACATCCTCT+AGG + Chr1:100188789-100188808 MsG0180006103.01.T01:five_prime_UTR 35.0%
!! CTTGAATGAAGTGATGGATT+AGG + Chr1:100190653-100190672 MsG0180006103.01.T01:intron 35.0%
!! GCTTGTTGTAGTATACAAAC+TGG + Chr1:100188892-100188911 MsG0180006103.01.T01:intron 35.0%
!! TTTATTCAAGTTGGAACAGG+AGG + Chr1:100193530-100193549 MsG0180006103.01.T01:CDS 35.0%
!!! AGGTTCTTATTTTGCACTCT+TGG + Chr1:100190883-100190902 MsG0180006103.01.T01:intron 35.0%
!!! CATTGCTATTTTTGCTGTCT+CGG - Chr1:100191088-100191107 None:intergenic 35.0%
!!! TTTTTTTGGTGTTAACCCTC+CGG + Chr1:100196046-100196065 MsG0180006103.01.T01:intron 35.0%
AAAAGCTCTGTCTAGTGCTT+TGG + Chr1:100192368-100192387 MsG0180006103.01.T01:intron 40.0%
AAAGCTCTGTCTAGTGCTTT+GGG + Chr1:100192369-100192388 MsG0180006103.01.T01:intron 40.0%
AAATCCTAGACGGCAATAAG+AGG - Chr1:100197283-100197302 None:intergenic 40.0%
AAATGGTGCAATAGTAAGGG+AGG + Chr1:100188626-100188645 MsG0180006103.01.T01:five_prime_UTR 40.0%
AAATTGTGCAGAAACCACTG+GGG + Chr1:100194498-100194517 MsG0180006103.01.T01:intron 40.0%
AAGAGTAGAACCTGTTTGTG+CGG + Chr1:100195927-100195946 MsG0180006103.01.T01:intron 40.0%
AAGAGTCTTGACACAATGGT+TGG - Chr1:100196005-100196024 None:intergenic 40.0%
AAGGAAGTTAACAATCGTGC+TGG + Chr1:100188654-100188673 MsG0180006103.01.T01:five_prime_UTR 40.0%
AATCAAGCATCAGAGTGTGT+AGG - Chr1:100194073-100194092 None:intergenic 40.0%
AATCCTAGACGGCAATAAGA+GGG - Chr1:100197282-100197301 None:intergenic 40.0%
AATGTCACAGCCAATCAACT+TGG - Chr1:100192803-100192822 None:intergenic 40.0%
ACAGAAGAGTCTTGACACAA+TGG - Chr1:100196009-100196028 None:intergenic 40.0%
ACATATGAAGAGATGGCCAA+AGG - Chr1:100189299-100189318 None:intergenic 40.0%
AGACTTAAATGGACCCTACA+TGG - Chr1:100190498-100190517 None:intergenic 40.0%
AGAGAACAATTGCCGTATTG+CGG - Chr1:100189026-100189045 None:intergenic 40.0%
AGAGTAGTCCAATGCAATGA+AGG + Chr1:100191647-100191666 MsG0180006103.01.T01:intron 40.0%
AGAGTGTGTAGGCTTTCTAT+TGG - Chr1:100194062-100194081 None:intergenic 40.0%
AGGAAGATGACATTTGCTTG+AGG - Chr1:100195092-100195111 None:intergenic 40.0%
AGTAGTCCAATGCAATGAAG+GGG + Chr1:100191649-100191668 MsG0180006103.01.T01:intron 40.0%
AGTCCTTGTTCATATGATCC+AGG - Chr1:100196398-100196417 None:intergenic 40.0%
AGTTGCACTTAGTCCATACA+TGG - Chr1:100192939-100192958 None:intergenic 40.0%
CAAATGTTTGCATCTATGCG+TGG + Chr1:100191482-100191501 MsG0180006103.01.T01:intron 40.0%
CACTCTTGGATTAACCTTGA+TGG + Chr1:100190897-100190916 MsG0180006103.01.T01:intron 40.0%
CCAACACACATATGAAGAGA+TGG - Chr1:100189306-100189325 None:intergenic 40.0%
CCATACATGGTCATGAACAA+AGG - Chr1:100192926-100192945 None:intergenic 40.0%
CCATCTCTTCATATGTGTGT+TGG + Chr1:100189303-100189322 MsG0180006103.01.T01:intron 40.0%
CCCATTCATGCAGTTATTAG+AGG + Chr1:100197657-100197676 MsG0180006103.01.T01:CDS 40.0%
CCTAAAATTTCTCTGTGCTC+TGG + Chr1:100193745-100193764 MsG0180006103.01.T01:intron 40.0%
CCTTGAAAATGTTGCATCTC+AGG + Chr1:100196655-100196674 MsG0180006103.01.T01:CDS 40.0%
CCTTTGTTCATGACCATGTA+TGG + Chr1:100192923-100192942 MsG0180006103.01.T01:intron 40.0%
CTCACCAAAAGTTTGCGAAA+AGG + Chr1:100196495-100196514 MsG0180006103.01.T01:CDS 40.0%
CTCAGACTGACTAAGCATAT+AGG - Chr1:100195128-100195147 None:intergenic 40.0%
CTGACCTTTCTCTTATTGTC+TGG + Chr1:100196603-100196622 MsG0180006103.01.T01:intron 40.0%
CTTGCTGCAGTATTATGGTT+GGG + Chr1:100192221-100192240 MsG0180006103.01.T01:CDS 40.0%
GAAAATTGTGCAGAAACCAC+TGG + Chr1:100194496-100194515 MsG0180006103.01.T01:intron 40.0%
GAACATAATCCACCAAAGGA+CGG - Chr1:100196163-100196182 None:intergenic 40.0%
GACAAACCTAATGCATCACT+AGG - Chr1:100193160-100193179 None:intergenic 40.0%
GACATGTCGAAAGAATTAGG+TGG - Chr1:100197594-100197613 None:intergenic 40.0%
GACTTAAATGGACCCTACAT+GGG - Chr1:100190497-100190516 None:intergenic 40.0%
GAGATTCACTTCAGTGAAAC+TGG + Chr1:100191359-100191378 MsG0180006103.01.T01:five_prime_UTR 40.0%
GAGGTAGCATCCTTATATCT+TGG - Chr1:100194181-100194200 None:intergenic 40.0%
GAGTAGTCCAATGCAATGAA+GGG + Chr1:100191648-100191667 MsG0180006103.01.T01:intron 40.0%
GAGTGTGTAGGCTTTCTATT+GGG - Chr1:100194061-100194080 None:intergenic 40.0%
GATGAAGAATCTCCATATGG+TGG + Chr1:100188693-100188712 MsG0180006103.01.T01:five_prime_UTR 40.0%
GATGTTGTCCACATTAGCAA+AGG + Chr1:100192173-100192192 MsG0180006103.01.T01:five_prime_UTR 40.0%
GATTCACCATTTCCACCATA+TGG - Chr1:100188708-100188727 None:intergenic 40.0%
GATTCCATCAGTAGAGATTC+TGG - Chr1:100192316-100192335 None:intergenic 40.0%
GCTATAGATGAGGACTAGAT+AGG - Chr1:100194016-100194035 None:intergenic 40.0%
GGATCAAATGGTCGTGAAAA+TGG + Chr1:100188609-100188628 MsG0180006103.01.T01:five_prime_UTR 40.0%
GTAGAATGTTGAGGATTGGA+AGG + Chr1:100189132-100189151 MsG0180006103.01.T01:intron 40.0%
GTCCCTTACACAAATTAGGT+GGG + Chr1:100195161-100195180 MsG0180006103.01.T01:intron 40.0%
GTGCAAGAGTTAGAGTAAGA+AGG - Chr1:100190265-100190284 None:intergenic 40.0%
GTTGGTCCCTTACACAAATT+AGG + Chr1:100195157-100195176 MsG0180006103.01.T01:CDS 40.0%
TAAGAGAAAGGTCAGAAACG+TGG - Chr1:100196598-100196617 None:intergenic 40.0%
TACACGTAAAATGCCATGGA+GGG - Chr1:100197481-100197500 None:intergenic 40.0%
TAGAGGAGAGAAAAGCAGAA+AGG + Chr1:100197674-100197693 MsG0180006103.01.T01:CDS 40.0%
TAGTGATGCAAGAGATGCTT+TGG + Chr1:100193210-100193229 MsG0180006103.01.T01:CDS 40.0%
TCACTTCAGCATATGTAGTG+AGG - Chr1:100195488-100195507 None:intergenic 40.0%
TCAGTTGAAACAATTGTCCC+TGG - Chr1:100196311-100196330 None:intergenic 40.0%
TCATGAAATGGTCTGGTAGT+TGG + Chr1:100195259-100195278 MsG0180006103.01.T01:intron 40.0%
TCCACTCCATCAAGAATATC+AGG - Chr1:100189793-100189812 None:intergenic 40.0%
TCCCTTACACAAATTAGGTG+GGG + Chr1:100195162-100195181 MsG0180006103.01.T01:intron 40.0%
TCCTCATCTATAGCCAATGT+GGG + Chr1:100194022-100194041 MsG0180006103.01.T01:intron 40.0%
TCCTGATATTCTTGATGGAG+TGG + Chr1:100189789-100189808 MsG0180006103.01.T01:five_prime_UTR 40.0%
TCTAGTTGGAAATCCTGATC+GGG - Chr1:100196471-100196490 None:intergenic 40.0%
TCTTAGGCAATACCGCAATA+CGG + Chr1:100189011-100189030 MsG0180006103.01.T01:intron 40.0%
TGCATAATGACGCACAGTAA+AGG - Chr1:100194642-100194661 None:intergenic 40.0%
TGTATCATAGGTCACCTGAT+CGG - Chr1:100195011-100195030 None:intergenic 40.0%
TGTTTCAGAAGCTTCAGTCT+TGG + Chr1:100189560-100189579 MsG0180006103.01.T01:intron 40.0%
TTATTCTTACCTGCCCTGTT+CGG - Chr1:100196766-100196785 None:intergenic 40.0%
TTCTGCTCGAGAAAGAAAGA+TGG + Chr1:100195639-100195658 MsG0180006103.01.T01:intron 40.0%
TTTACTGTGCGTCATTATGC+AGG + Chr1:100194641-100194660 MsG0180006103.01.T01:CDS 40.0%
TTTGGAGAAAACCAAAGCTG+CGG - Chr1:100195234-100195253 None:intergenic 40.0%
! AAGGTATCCAATGCATTGCA+AGG + Chr1:100195746-100195765 MsG0180006103.01.T01:intron 40.0%
! AGACTTTTGTACTTTCCGCA+TGG + Chr1:100190984-100191003 MsG0180006103.01.T01:intron 40.0%
! ATTGCTGTGGTGGTGATAAA+TGG + Chr1:100196831-100196850 MsG0180006103.01.T01:intron 40.0%
! CAAATGCTGCTTAAGCTTGT+TGG - Chr1:100194582-100194601 None:intergenic 40.0%
! CAATGCTTGCTGCAGTATTA+TGG + Chr1:100192216-100192235 MsG0180006103.01.T01:exon 40.0%
! CCAGAGCACAGAGAAATTTT+AGG - Chr1:100193748-100193767 None:intergenic 40.0%
! CCTGAGATGCAACATTTTCA+AGG - Chr1:100196658-100196677 None:intergenic 40.0%
! CGTGTACAAAGTTGCTTTAG+GGG + Chr1:100197495-100197514 MsG0180006103.01.T01:CDS 40.0%
! CTCTTTTCTGGATTCCATCA+TGG - Chr1:100195912-100195931 None:intergenic 40.0%
! CTGTTCAAGGTTTGGTCATA+AGG - Chr1:100191523-100191542 None:intergenic 40.0%
! GAATCTCCATATGGTGGAAA+TGG + Chr1:100188699-100188718 MsG0180006103.01.T01:five_prime_UTR 40.0%
! GCGGAAAGTACAAAAGTCTA+AGG - Chr1:100190983-100191002 None:intergenic 40.0%
! GTGTCATTGATATTCAGACG+AGG - Chr1:100195665-100195684 None:intergenic 40.0%
! TTGCTGTGGTGGTGATAAAT+GGG + Chr1:100196832-100196851 MsG0180006103.01.T01:intron 40.0%
! TTGGAGTGCTTGAAGATACT+AGG + Chr1:100197448-100197467 MsG0180006103.01.T01:CDS 40.0%
!! GAAGAGTCCACTTTTCCAAA+CGG + Chr1:100194539-100194558 MsG0180006103.01.T01:CDS 40.0%
!! GATTTAATGGACTGGAAAGC+AGG - Chr1:100188498-100188517 None:intergenic 40.0%
!! TAATCGAAACACTGGTCTTG+TGG + Chr1:100188545-100188564 MsG0180006103.01.T01:five_prime_UTR 40.0%
!! TAGGACTAGTATGACTTGCT+AGG + Chr1:100188922-100188941 MsG0180006103.01.T01:intron 40.0%
!! TCTGTTATTTCACTGCCTGA+CGG + Chr1:100189643-100189662 MsG0180006103.01.T01:five_prime_UTR 40.0%
!! TGTGGCAACACTTAGCTTTT+GGG - Chr1:100195194-100195213 None:intergenic 40.0%
!! TTGTGGCAACACTTAGCTTT+TGG - Chr1:100195195-100195214 None:intergenic 40.0%
AAACAGAGACCTAATGCACG+TGG + Chr1:100195048-100195067 MsG0180006103.01.T01:CDS 45.0%
AACCTCTGCCGTGAATGTTT+AGG - Chr1:100190868-100190887 None:intergenic 45.0%
AATAAGAGGTCCAGTGTGCA+AGG + Chr1:100190469-100190488 MsG0180006103.01.T01:intron 45.0%
ACCTTTCCCCTTCATTGCAT+TGG - Chr1:100191658-100191677 None:intergenic 45.0%
ACTAAGTGCAACTTCCTAGG+AGG + Chr1:100192946-100192965 MsG0180006103.01.T01:intron 45.0%
ACTTCTCTTACTTTCCCGTC+AGG - Chr1:100189661-100189680 None:intergenic 45.0%
AGTTCTTTCTGTTGGCATCC+AGG + Chr1:100196290-100196309 MsG0180006103.01.T01:intron 45.0%
ATCCGTACCGTTTGGAAAAG+TGG - Chr1:100194549-100194568 None:intergenic 45.0%
ATGCACCCTAGTGATGCATT+AGG + Chr1:100193151-100193170 MsG0180006103.01.T01:intron 45.0%
CAATTACCCCTGAGAGATGA+TGG - Chr1:100191715-100191734 None:intergenic 45.0%
CAGTCTGAGAAACCTGTAGT+TGG + Chr1:100195139-100195158 MsG0180006103.01.T01:CDS 45.0%
CATCATCTCTCAGGGGTAAT+TGG + Chr1:100191713-100191732 MsG0180006103.01.T01:intron 45.0%
CCAGTTCAAATACAGCCATG+CGG - Chr1:100191002-100191021 None:intergenic 45.0%
CCTGGCCAATAATTGAACTC+GGG + Chr1:100196124-100196143 MsG0180006103.01.T01:intron 45.0%
CGCATGGCTGTATTTGAACT+GGG + Chr1:100191000-100191019 MsG0180006103.01.T01:five_prime_UTR 45.0%
CTAACCAAGTAACCATGACC+AGG - Chr1:100197219-100197238 None:intergenic 45.0%
CTAAGTGCAACTTCCTAGGA+GGG + Chr1:100192947-100192966 MsG0180006103.01.T01:intron 45.0%
CTCATGTCTGTTTGATTGGC+TGG + Chr1:100193246-100193265 MsG0180006103.01.T01:CDS 45.0%
CTGGTCATGGTTACTTGGTT+AGG + Chr1:100197217-100197236 MsG0180006103.01.T01:intron 45.0%
CTTACTTGGCCTGTTCTTGA+GGG + Chr1:100191259-100191278 MsG0180006103.01.T01:intron 45.0%
CTTGGTCTCCTTTGCTAATG+TGG - Chr1:100192184-100192203 None:intergenic 45.0%
GAAGCTAAATCTGCGAAGTG+TGG + Chr1:100191932-100191951 MsG0180006103.01.T01:five_prime_UTR 45.0%
GAAGTTAACAATCGTGCTGG+CGG + Chr1:100188657-100188676 MsG0180006103.01.T01:five_prime_UTR 45.0%
GCAATCAGAGAGATGATACG+AGG + Chr1:100190110-100190129 MsG0180006103.01.T01:five_prime_UTR 45.0%
GCCATTCTCAAAGTTCCACT+TGG + Chr1:100189361-100189380 MsG0180006103.01.T01:intron 45.0%
GCCTGGCCAATAATTGAACT+CGG + Chr1:100196123-100196142 MsG0180006103.01.T01:intron 45.0%
GCTGTTGGCAAAAGACAAAC+TGG + Chr1:100193292-100193311 MsG0180006103.01.T01:CDS 45.0%
GCTTGAGGATAGAAGTTGGA+TGG - Chr1:100195077-100195096 None:intergenic 45.0%
GGGAACCCGAGTTCAATTAT+TGG - Chr1:100196132-100196151 None:intergenic 45.0%
GGGATATTCGAACCACTTCT+AGG - Chr1:100196451-100196470 None:intergenic 45.0%
GGTCCCTTACACAAATTAGG+TGG + Chr1:100195160-100195179 MsG0180006103.01.T01:intron 45.0%
GTACACGTAAAATGCCATGG+AGG - Chr1:100197482-100197501 None:intergenic 45.0%
GTATCAAACTTGAACTCGGG+TGG - Chr1:100188525-100188544 None:intergenic 45.0%
GTCCTCATCTATAGCCAATG+TGG + Chr1:100194021-100194040 MsG0180006103.01.T01:intron 45.0%
GTTCAAGCTGTTGAGGATGA+GGG + Chr1:100192281-100192300 MsG0180006103.01.T01:CDS 45.0%
GTTCTTTCTGTTGGCATCCA+GGG + Chr1:100196291-100196310 MsG0180006103.01.T01:intron 45.0%
GTTGTCATTGCAAGGAGCTT+TGG + Chr1:100197529-100197548 MsG0180006103.01.T01:CDS 45.0%
TCAAGCTCGTTGTCATTGCA+AGG + Chr1:100197521-100197540 MsG0180006103.01.T01:CDS 45.0%
TCCAATGCAATGAAGGGGAA+AGG + Chr1:100191654-100191673 MsG0180006103.01.T01:intron 45.0%
TCGCCTGGATCATATGAACA+AGG + Chr1:100196392-100196411 MsG0180006103.01.T01:CDS 45.0%
TCTGTGATAACCGCACAAAC+AGG - Chr1:100195940-100195959 None:intergenic 45.0%
TCTTACTTGGCCTGTTCTTG+AGG + Chr1:100191258-100191277 MsG0180006103.01.T01:intron 45.0%
TGCAGCAGTTGAGATGTTGT+GGG + Chr1:100196423-100196442 MsG0180006103.01.T01:CDS 45.0%
TGGACTAAGTGCAACTTCCT+AGG + Chr1:100192943-100192962 MsG0180006103.01.T01:intron 45.0%
TGTGTTGCGCATAGTATGAC+AGG - Chr1:100194139-100194158 None:intergenic 45.0%
TGTTCAAGCTGTTGAGGATG+AGG + Chr1:100192280-100192299 MsG0180006103.01.T01:CDS 45.0%
TGTTGAGGATTGGAAGGAAC+TGG + Chr1:100189138-100189157 MsG0180006103.01.T01:intron 45.0%
TTCCTAAACATTCACGGCAG+AGG + Chr1:100190863-100190882 MsG0180006103.01.T01:intron 45.0%
TTCTAATGGGGATTGGGAAC+TGG + Chr1:100189591-100189610 MsG0180006103.01.T01:five_prime_UTR 45.0%
TTCTGCTCTGTGTAATGGCT+CGG + Chr1:100192115-100192134 MsG0180006103.01.T01:intron 45.0%
TTGCAAAGATCTTCCCTCCT+AGG - Chr1:100192963-100192982 None:intergenic 45.0%
TTGGAGAAAACCAAAGCTGC+GGG - Chr1:100195233-100195252 None:intergenic 45.0%
TTGTGTAAGGGACCAACTAC+AGG - Chr1:100195154-100195173 None:intergenic 45.0%
TTTAACCATCAGCCTGGTCA+TGG + Chr1:100197204-100197223 MsG0180006103.01.T01:intron 45.0%
TTTCCCTCTTATTGCCGTCT+AGG + Chr1:100197276-100197295 MsG0180006103.01.T01:intron 45.0%
! AGTGGACTCTTCGTCTAACA+AGG - Chr1:100194531-100194550 None:intergenic 45.0%
! ATGCAGGAGAGGTATGAATC+TGG + Chr1:100194657-100194676 MsG0180006103.01.T01:intron 45.0%
! CGCAGATTTAGCTTCTCTGA+GGG - Chr1:100191927-100191946 None:intergenic 45.0%
! GAACAGCCCTTTAAGAAGTC+AGG - Chr1:100192773-100192792 None:intergenic 45.0%
! GAGAGGTATGAATCTGGTCA+AGG + Chr1:100194663-100194682 MsG0180006103.01.T01:intron 45.0%
! GCCAAGTGGAACTTTGAGAA+TGG - Chr1:100189365-100189384 None:intergenic 45.0%
! GCCCCACCTAATTTGTGTAA+GGG - Chr1:100195166-100195185 None:intergenic 45.0%
! GCTTGCTGCAGTATTATGGT+TGG + Chr1:100192220-100192239 MsG0180006103.01.T01:CDS 45.0%
! GTGGCAACGATTTAATGGAC+TGG - Chr1:100188506-100188525 None:intergenic 45.0%
! TCCCACATTGGCTATAGATG+AGG - Chr1:100194026-100194045 None:intergenic 45.0%
! TCGCAGATTTAGCTTCTCTG+AGG - Chr1:100191928-100191947 None:intergenic 45.0%
! TGCCCCACCTAATTTGTGTA+AGG - Chr1:100195167-100195186 None:intergenic 45.0%
!! ACATCCAAGACGGCATTGAT+TGG + Chr1:100193921-100193940 MsG0180006103.01.T01:CDS 45.0%
!! ACTGGTCTTGTGGAAAAGCA+CGG + Chr1:100188555-100188574 MsG0180006103.01.T01:five_prime_UTR 45.0%
!! CATCCAAGACGGCATTGATT+GGG + Chr1:100193922-100193941 MsG0180006103.01.T01:CDS 45.0%
!! CTGTTATTTCACTGCCTGAC+GGG + Chr1:100189644-100189663 MsG0180006103.01.T01:five_prime_UTR 45.0%
!! GTCCACTTTTCCAAACGGTA+CGG + Chr1:100194544-100194563 MsG0180006103.01.T01:CDS 45.0%
!! GTGAGAAGCACTGATCTGAT+TGG + Chr1:100188588-100188607 MsG0180006103.01.T01:five_prime_UTR 45.0%
!! TTAATGGACTGGAAAGCAGG+CGG - Chr1:100188495-100188514 None:intergenic 45.0%
!! TTCAGCACTGCCAAGTTGAT+TGG + Chr1:100192790-100192809 MsG0180006103.01.T01:CDS 45.0%
!!! TTGATATATATATTTTTTTT+TGG + Chr1:100196032-100196051 MsG0180006103.01.T01:intron 5.0%
AAATGGGACAGGTTTGGGGA+AGG - Chr1:100196563-100196582 None:intergenic 50.0%
AACAAGGATAGTAGCCCCAG+TGG - Chr1:100194515-100194534 None:intergenic 50.0%
AAGGTACAAACCCGCAGCTT+TGG + Chr1:100195220-100195239 MsG0180006103.01.T01:intron 50.0%
AATGGGACAGGTTTGGGGAA+GGG - Chr1:100196562-100196581 None:intergenic 50.0%
ACTAGGAATCGTACCCTCCA+TGG + Chr1:100197465-100197484 MsG0180006103.01.T01:CDS 50.0%
ACTCCATCTGCTTTCCCTAG+AGG - Chr1:100188807-100188826 None:intergenic 50.0%
AGTAACCATGACCAGGCTGA+TGG - Chr1:100197212-100197231 None:intergenic 50.0%
ATAGTGGTGAGAGTGGAGCA+GGG + Chr1:100191058-100191077 MsG0180006103.01.T01:five_prime_UTR 50.0%
ATGTTGTGGGGTCCTAGAAG+TGG + Chr1:100196436-100196455 MsG0180006103.01.T01:CDS 50.0%
ATTGTTCTTCCGAACAGGGC+AGG + Chr1:100196754-100196773 MsG0180006103.01.T01:CDS 50.0%
CCAGAAGTTGACGCTATCTC+AGG + Chr1:100192882-100192901 MsG0180006103.01.T01:CDS 50.0%
CCAGTCTGTTACTCTTCCCA+AGG - Chr1:100197622-100197641 None:intergenic 50.0%
CCCGAGTTCAATTATTGGCC+AGG - Chr1:100196127-100196146 None:intergenic 50.0%
CCGCATGGCTGTATTTGAAC+TGG + Chr1:100190999-100191018 MsG0180006103.01.T01:five_prime_UTR 50.0%
CCTGAGATAGCGTCAACTTC+TGG - Chr1:100192885-100192904 None:intergenic 50.0%
CCTTGGGAAGAGTAACAGAC+TGG + Chr1:100197619-100197638 MsG0180006103.01.T01:CDS 50.0%
CTCAAAGTTCCACTTGGCTG+TGG + Chr1:100189367-100189386 MsG0180006103.01.T01:intron 50.0%
CTCGGGTGGCAACGATTTAA+TGG - Chr1:100188511-100188530 None:intergenic 50.0%
CTGCAGCAGTTGAGATGTTG+TGG + Chr1:100196422-100196441 MsG0180006103.01.T01:CDS 50.0%
GAGGATTGGAAGGAACTGGT+GGG + Chr1:100189142-100189161 MsG0180006103.01.T01:intron 50.0%
GCAGCAGTTGAGATGTTGTG+GGG + Chr1:100196424-100196443 MsG0180006103.01.T01:CDS 50.0%
GCCAGGCTTTACTTATCTCC+CGG - Chr1:100196110-100196129 None:intergenic 50.0%
GCTAAATCTGCGAAGTGTGG+AGG + Chr1:100191935-100191954 MsG0180006103.01.T01:five_prime_UTR 50.0%
GGAAAGGGGACCTAGTAATG+CGG + Chr1:100196077-100196096 MsG0180006103.01.T01:intron 50.0%
GGACCTAGTAATGCGGAGTT+CGG + Chr1:100196084-100196103 MsG0180006103.01.T01:intron 50.0%
GGATGGAATCCACGTGCATT+AGG - Chr1:100195060-100195079 None:intergenic 50.0%
GGATTTACGGCCACCAAAAC+AGG - Chr1:100189996-100190015 None:intergenic 50.0%
GTGGTTCGAATATCCCGATC+AGG + Chr1:100196455-100196474 MsG0180006103.01.T01:CDS 50.0%
GTTCATATGATCCAGGCGAC+TGG - Chr1:100196391-100196410 None:intergenic 50.0%
TAGCCCAATCAATGCCGTCT+TGG - Chr1:100193928-100193947 None:intergenic 50.0%
TATAGTGGTGAGAGTGGAGC+AGG + Chr1:100191057-100191076 MsG0180006103.01.T01:five_prime_UTR 50.0%
TATTCCACTTCCGCCACCAA+GGG - Chr1:100191124-100191143 None:intergenic 50.0%
TCAGCCTGGTCATGGTTACT+TGG + Chr1:100197212-100197231 MsG0180006103.01.T01:intron 50.0%
TGAGGACTAGATAGGGACAG+AGG - Chr1:100194008-100194027 None:intergenic 50.0%
TGAGGATTGGAAGGAACTGG+TGG + Chr1:100189141-100189160 MsG0180006103.01.T01:intron 50.0%
TGTGCGTCATTATGCAGGAG+AGG + Chr1:100194646-100194665 MsG0180006103.01.T01:CDS 50.0%
TGTTAACCCTCCGGTTCCTA+GGG + Chr1:100196055-100196074 MsG0180006103.01.T01:intron 50.0%
! CATCCTCTAGGGAAAGCAGA+TGG + Chr1:100188801-100188820 MsG0180006103.01.T01:five_prime_UTR 50.0%
! GACAAAAGCAGGGCCTGTTT+TGG + Chr1:100189980-100189999 MsG0180006103.01.T01:intron 50.0%
! TCTGTCTAGTGCTTTGGGCT+TGG + Chr1:100192374-100192393 MsG0180006103.01.T01:intron 50.0%
!! AAAAGCAGGGCCTGTTTTGG+TGG + Chr1:100189983-100190002 MsG0180006103.01.T01:five_prime_UTR 50.0%
!! CATTGCAAGGAGCTTTGGAG+AGG + Chr1:100197534-100197553 MsG0180006103.01.T01:CDS 50.0%
!! TAATGGACTGGAAAGCAGGC+GGG - Chr1:100188494-100188513 None:intergenic 50.0%
ACCAAAGGACGGATCGTTCG+GGG - Chr1:100196152-100196171 None:intergenic 55.0%
AGTGTGCAAGGCTCCCATGT+AGG + Chr1:100190481-100190500 MsG0180006103.01.T01:intron 55.0%
ATGCAATACCTGGCTGCCCT+TGG + Chr1:100191105-100191124 MsG0180006103.01.T01:five_prime_UTR 55.0%
ATGGGACAGGTTTGGGGAAG+GGG - Chr1:100196561-100196580 None:intergenic 55.0%
CACCAAAGGACGGATCGTTC+GGG - Chr1:100196153-100196172 None:intergenic 55.0%
CATATGATCCAGGCGACTGG+AGG - Chr1:100196388-100196407 None:intergenic 55.0%
CCACCAAAGGACGGATCGTT+CGG - Chr1:100196154-100196173 None:intergenic 55.0%
CCAGGCGACTGGAGGTTATT+GGG - Chr1:100196380-100196399 None:intergenic 55.0%
CTAGTAATGCGGAGTTCGGC+CGG + Chr1:100196088-100196107 MsG0180006103.01.T01:intron 55.0%
CTATTCCACTTCCGCCACCA+AGG - Chr1:100191125-100191144 None:intergenic 55.0%
GCCGGGAGATAAGTAAAGCC+TGG + Chr1:100196106-100196125 MsG0180006103.01.T01:intron 55.0%
GTGTGCAAGGCTCCCATGTA+GGG + Chr1:100190482-100190501 MsG0180006103.01.T01:intron 55.0%
GTGTTAACCCTCCGGTTCCT+AGG + Chr1:100196054-100196073 MsG0180006103.01.T01:intron 55.0%
GTTAACCCTCCGGTTCCTAG+GGG + Chr1:100196056-100196075 MsG0180006103.01.T01:intron 55.0%
TACATGGGAGCCTTGCACAC+TGG - Chr1:100190482-100190501 None:intergenic 55.0%
TACTAGGTCCCCTTTCCCCT+AGG - Chr1:100196074-100196093 None:intergenic 55.0%
TAGTAATGCGGAGTTCGGCC+GGG + Chr1:100196089-100196108 MsG0180006103.01.T01:intron 55.0%
TCCAGGCGACTGGAGGTTAT+TGG - Chr1:100196381-100196400 None:intergenic 55.0%
TGCATCACTAGGGTGCATGC+AGG - Chr1:100193149-100193168 None:intergenic 55.0%
! GGACAACATCCAGAGCATCC+TGG - Chr1:100192163-100192182 None:intergenic 55.0%
! TAACAATCGTGCTGGCGGCA+TGG + Chr1:100188662-100188681 MsG0180006103.01.T01:five_prime_UTR 55.0%
! TGGAGCGCCATCATCTCTCA+GGG + Chr1:100191705-100191724 MsG0180006103.01.T01:intron 55.0%
AGACCAGTGCCACAGCCAAG+TGG - Chr1:100189379-100189398 None:intergenic 60.0%
CAATACCTGGCTGCCCTTGG+TGG + Chr1:100191108-100191127 MsG0180006103.01.T01:five_prime_UTR 60.0%
CCCAATAACCTCCAGTCGCC+TGG + Chr1:100196377-100196396 MsG0180006103.01.T01:CDS 60.0%
CCGAACGATCCGTCCTTTGG+TGG + Chr1:100196151-100196170 MsG0180006103.01.T01:intron 60.0%
CCTCCGGTTCCTAGGGGAAA+GGG + Chr1:100196062-100196081 MsG0180006103.01.T01:intron 60.0%
CCTTTCCCCTAGGAACCGGA+GGG - Chr1:100196064-100196083 None:intergenic 60.0%
CGGCCGAACTCCGCATTACT+AGG - Chr1:100196090-100196109 None:intergenic 60.0%
CTCCGGTTCCTAGGGGAAAG+GGG + Chr1:100196063-100196082 MsG0180006103.01.T01:intron 60.0%
GTCCCCTTTCCCCTAGGAAC+CGG - Chr1:100196068-100196087 None:intergenic 60.0%
GTTCCACTTGGCTGTGGCAC+TGG + Chr1:100189373-100189392 MsG0180006103.01.T01:intron 60.0%
TCCCCGAACGATCCGTCCTT+TGG + Chr1:100196148-100196167 MsG0180006103.01.T01:intron 60.0%
TGGGACAGGTTTGGGGAAGG+GGG - Chr1:100196560-100196579 None:intergenic 60.0%
! CTGGAGCGCCATCATCTCTC+AGG + Chr1:100191704-100191723 MsG0180006103.01.T01:intron 60.0%
! GGAGCGCCATCATCTCTCAG+GGG + Chr1:100191706-100191725 MsG0180006103.01.T01:intron 60.0%
CCCTCCGGTTCCTAGGGGAA+AGG + Chr1:100196061-100196080 MsG0180006103.01.T01:intron 65.0%
CCCTTTCCCCTAGGAACCGG+AGG - Chr1:100196065-100196084 None:intergenic 65.0%
CTGGAAAGCAGGCGGGACAC+CGG - Chr1:100188487-100188506 None:intergenic 65.0%
GGGACAGGTTTGGGGAAGGG+GGG - Chr1:100196559-100196578 None:intergenic 65.0%
TACCTGGCTGCCCTTGGTGG+CGG + Chr1:100191111-100191130 MsG0180006103.01.T01:five_prime_UTR 65.0%
TTCCGCCACCAAGGGCAGCC+AGG - Chr1:100191116-100191135 None:intergenic 70.0%
!! GCTGCCCTTGGTGGCGGAAG+TGG + Chr1:100191117-100191136 MsG0180006103.01.T01:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 100188471 100197794 100188471 ID=MsG0180006103.01;Name=MsG0180006103.01
Chr1 mRNA 100188471 100197794 100188471 ID=MsG0180006103.01.T01;Parent=MsG0180006103.01;Name=MsG0180006103.01.T01;_AED=0.48;_eAED=0.50;_QI=1215|0.75|0.76|1|1|1|17|0|511
Chr1 exon 100188471 100188824 100188471 ID=MsG0180006103.01.T01:exon:38110;Parent=MsG0180006103.01.T01
Chr1 exon 100189568 100189669 100189568 ID=MsG0180006103.01.T01:exon:38111;Parent=MsG0180006103.01.T01
Chr1 exon 100189751 100189894 100189751 ID=MsG0180006103.01.T01:exon:38112;Parent=MsG0180006103.01.T01
Chr1 exon 100189981 100190131 100189981 ID=MsG0180006103.01.T01:exon:38113;Parent=MsG0180006103.01.T01
Chr1 exon 100190986 100191227 100190986 ID=MsG0180006103.01.T01:exon:38114;Parent=MsG0180006103.01.T01
Chr1 exon 100191347 100191410 100191347 ID=MsG0180006103.01.T01:exon:38115;Parent=MsG0180006103.01.T01
Chr1 exon 100191931 100192034 100191931 ID=MsG0180006103.01.T01:exon:38116;Parent=MsG0180006103.01.T01
Chr1 exon 100192164 100192302 100192164 ID=MsG0180006103.01.T01:exon:38117;Parent=MsG0180006103.01.T01
Chr1 exon 100192785 100192903 100192785 ID=MsG0180006103.01.T01:exon:38118;Parent=MsG0180006103.01.T01
Chr1 exon 100193208 100193360 100193208 ID=MsG0180006103.01.T01:exon:38119;Parent=MsG0180006103.01.T01
Chr1 exon 100193462 100193551 100193462 ID=MsG0180006103.01.T01:exon:38120;Parent=MsG0180006103.01.T01
Chr1 exon 100193917 100193994 100193917 ID=MsG0180006103.01.T01:exon:38121;Parent=MsG0180006103.01.T01
Chr1 exon 100194509 100194667 100194509 ID=MsG0180006103.01.T01:exon:38122;Parent=MsG0180006103.01.T01
Chr1 exon 100195016 100195178 100195016 ID=MsG0180006103.01.T01:exon:38123;Parent=MsG0180006103.01.T01
Chr1 exon 100196312 100196516 100196312 ID=MsG0180006103.01.T01:exon:38124;Parent=MsG0180006103.01.T01
Chr1 exon 100196640 100196775 100196640 ID=MsG0180006103.01.T01:exon:38125;Parent=MsG0180006103.01.T01
Chr1 exon 100197447 100197794 100197447 ID=MsG0180006103.01.T01:exon:38126;Parent=MsG0180006103.01.T01
Chr1 five_prime_UTR 100188471 100188824 100188471 ID=MsG0180006103.01.T01:five_prime_utr;Parent=MsG0180006103.01.T01
Chr1 five_prime_UTR 100189568 100189669 100189568 ID=MsG0180006103.01.T01:five_prime_utr;Parent=MsG0180006103.01.T01
Chr1 five_prime_UTR 100189751 100189894 100189751 ID=MsG0180006103.01.T01:five_prime_utr;Parent=MsG0180006103.01.T01
Chr1 five_prime_UTR 100189981 100190131 100189981 ID=MsG0180006103.01.T01:five_prime_utr;Parent=MsG0180006103.01.T01
Chr1 five_prime_UTR 100190986 100191227 100190986 ID=MsG0180006103.01.T01:five_prime_utr;Parent=MsG0180006103.01.T01
Chr1 five_prime_UTR 100191347 100191410 100191347 ID=MsG0180006103.01.T01:five_prime_utr;Parent=MsG0180006103.01.T01
Chr1 five_prime_UTR 100191931 100192034 100191931 ID=MsG0180006103.01.T01:five_prime_utr;Parent=MsG0180006103.01.T01
Chr1 five_prime_UTR 100192164 100192217 100192164 ID=MsG0180006103.01.T01:five_prime_utr;Parent=MsG0180006103.01.T01
Chr1 CDS 100192218 100192302 100192218 ID=MsG0180006103.01.T01:cds;Parent=MsG0180006103.01.T01
Chr1 CDS 100192785 100192903 100192785 ID=MsG0180006103.01.T01:cds;Parent=MsG0180006103.01.T01
Chr1 CDS 100193208 100193360 100193208 ID=MsG0180006103.01.T01:cds;Parent=MsG0180006103.01.T01
Chr1 CDS 100193462 100193551 100193462 ID=MsG0180006103.01.T01:cds;Parent=MsG0180006103.01.T01
Chr1 CDS 100193917 100193994 100193917 ID=MsG0180006103.01.T01:cds;Parent=MsG0180006103.01.T01
Chr1 CDS 100194509 100194667 100194509 ID=MsG0180006103.01.T01:cds;Parent=MsG0180006103.01.T01
Chr1 CDS 100195016 100195178 100195016 ID=MsG0180006103.01.T01:cds;Parent=MsG0180006103.01.T01
Chr1 CDS 100196312 100196516 100196312 ID=MsG0180006103.01.T01:cds;Parent=MsG0180006103.01.T01
Chr1 CDS 100196640 100196775 100196640 ID=MsG0180006103.01.T01:cds;Parent=MsG0180006103.01.T01
Chr1 CDS 100197447 100197794 100197447 ID=MsG0180006103.01.T01:cds;Parent=MsG0180006103.01.T01
Gene Sequence

>MsG0180006103.01.T01

ATGCTTGCTGCAGTATTATGGTTGGGAAACATATCGTTTACTGTGATCGATAATGAAAATCATGTTCAAGCTGTTGAGGATGAGGGGCTGTTCAGCACTGCCAAGTTGATTGGCTGTGACATTGAAGATCTGAAGTTGACTTTATCAACTCGAAAAATGAAAGTTGGTAAAGATACTATTGTCCAGAAGTTGACGCTATCTCAGGCTAGTGATGCAAGAGATGCTTTGGCGAAGTCTATTTACTCATGTCTGTTTGATTGGCTGGTTGAACAAATAAACAAATCACTAGCTGTTGGCAAAAGACAAACTGGAAGATCTATCAGTATTCTAGATATTTATGGCTTTGAGTCATTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAAAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTGGAACAGGAGGAATACATCCAAGACGGCATTGATTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAAAAGAAACCACTGGGGCTACTATCCTTGTTAGACGAAGAGTCCACTTTTCCAAACGGTACGGATTTAACATTTGCCAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGCTTCAAAGGAGAACGAGAAAAAGCCTTTACTGTGCGTCATTATGCAGGAGAGGTGACCTATGATACAACTGCATTCCTAGAAAAAAACAGAGACCTAATGCACGTGGATTCCATCCAACTTCTATCCTCAAGCAAATGTCATCTTCCTCAGATATTTGCATCCTATATGCTTAGTCAGTCTGAGAAACCTGTAGTTGGTCCCTTACACAAATTAGGGACAATTGTTTCAACTGATGCAACGTTTAGAGAGTACACACCTCATTTTATTCGCTGCATTAAGCCCAATAACCTCCAGTCGCCTGGATCATATGAACAAGGACTTGTACTGCAGCAGTTGAGATGTTGTGGGGTCCTAGAAGTGGTTCGAATATCCCGATCAGGATTTCCAACTAGAATGTCTCACCAAAAGTTTGCGAAAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCATCTCAGGATCCACTTAGTGTTTCTGTTGCTATTCTTCATCAGTTTAACATTTTGCCTGAAATGTATCAAGTTGGCTACACAAAATTGTTCTTCCGAACAGGGCAGATTGGAGTGCTTGAAGATACTAGGAATCGTACCCTCCATGGCATTTTACGTGTACAAAGTTGCTTTAGGGGTTATCAAGCTCGTTGTCATTGCAAGGAGCTTTGGAGAGGAGTCACTACTCTTCAGTCATGTATTTCCTTTACTCCACCTAATTCTTTCGACATGTCATATTCCTTGGGAAGAGTAACAGACTGGAACCTTTTTTTTTTACCCATTCATGCAGTTATTAGAGGAGAGAAAAGCAGAAAGGAGTTTGCAACTTTGCTTCAGAGACATAGAGCTGCTGTTATTATACAGAAGCACGTGAAAACAGTATATCAAAGTAAAAGAAATGAAAGACACCATTGA
Protein sequence

>MsG0180006103.01.T01

MLAAVLWLGNISFTVIDNENHVQAVEDEGLFSTAKLIGCDIEDLKLTLSTRKMKVGKDTIVQKLTLSQASDARDALAKSIYSCLFDWLVEQINKSLAVGKRQTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGEREKAFTVRHYAGEVTYDTTAFLEKNRDLMHVDSIQLLSSSKCHLPQIFASYMLSQSEKPVVGPLHKLGTIVSTDATFREYTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFAKRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQARCHCKELWRGVTTLQSCISFTPPNSFDMSYSLGRVTDWNLFFLPIHAVIRGEKSRKEFATLLQRHRAAVIIQKHVKTVYQSKRNERHH*