AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015545.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015545.01.T01 MTR_3g072300 98.642 589 8 0 1 589 1 589 0.0 1201
MsG0380015545.01.T01 MTR_7g098160 51.478 575 270 4 2 571 11 581 0.0 615
MsG0380015545.01.T01 MTR_7g098040 51.478 575 270 4 2 571 12 582 0.0 602
MsG0380015545.01.T01 MTR_1g041815 51.552 580 273 4 6 581 9 584 0.0 599
MsG0380015545.01.T01 MTR_1g075440 51.295 579 271 5 4 576 8 581 0.0 598
MsG0380015545.01.T01 MTR_7g098200 50.087 575 278 4 2 571 7 577 0.0 595
MsG0380015545.01.T01 MTR_7g098090 50.777 579 271 5 3 571 12 586 0.0 594
MsG0380015545.01.T01 MTR_1g041835 52.491 562 259 4 6 563 9 566 0.0 593
MsG0380015545.01.T01 MTR_7g098180 50.709 564 268 4 4 561 11 570 0.0 582
MsG0380015545.01.T01 MTR_7g098200 49.739 575 270 5 2 571 7 567 0.0 581
MsG0380015545.01.T01 MTR_7g098220 49.576 589 284 6 5 585 11 594 0.0 581
MsG0380015545.01.T01 MTR_1g042310 48.973 584 291 4 1 580 3 583 0.0 581
MsG0380015545.01.T01 MTR_7g098230 50.000 554 266 5 32 580 34 581 0.0 564
MsG0380015545.01.T01 MTR_1g041875 47.865 562 279 5 6 563 11 562 0.0 535
MsG0380015545.01.T01 MTR_7g067010 46.277 564 296 5 3 562 2 562 0.0 535
MsG0380015545.01.T01 MTR_1g042310 47.993 548 278 4 37 580 2 546 0.0 532
MsG0380015545.01.T01 MTR_7g098220 48.556 554 272 6 40 585 2 550 0.0 526
MsG0380015545.01.T01 MTR_1g042310 47.786 542 276 4 43 580 1 539 0.0 523
MsG0380015545.01.T01 MTR_1g041885 48.814 506 245 5 43 544 1 496 2.15e-174 505
MsG0380015545.01.T01 MTR_4g015080 44.149 564 307 5 4 562 12 572 4.90e-171 498
MsG0380015545.01.T01 MTR_7g098150 50.959 469 221 4 2 465 11 475 1.32e-170 494
MsG0380015545.01.T01 MTR_3g462710 43.286 566 315 4 1 562 1 564 6.23e-166 484
MsG0380015545.01.T01 MTR_7g098200 48.180 467 233 4 110 571 1 463 2.01e-154 452
MsG0380015545.01.T01 MTR_3g069500 40.172 580 319 8 4 580 15 569 3.53e-152 450
MsG0380015545.01.T01 MTR_7g065080 38.786 593 342 7 1 585 4 583 8.05e-150 444
MsG0380015545.01.T01 MTR_3g005010 41.563 563 295 6 8 565 14 547 1.04e-149 442
MsG0380015545.01.T01 MTR_3g069420 39.353 587 342 9 4 584 14 592 1.39e-148 441
MsG0380015545.01.T01 MTR_4g019580 38.529 571 339 6 2 567 12 575 2.16e-146 436
MsG0380015545.01.T01 MTR_0294s0020 41.947 565 304 9 1 563 9 551 1.49e-145 432
MsG0380015545.01.T01 MTR_4g033315 41.039 558 308 8 10 565 17 555 2.10e-145 432
MsG0380015545.01.T01 MTR_4g033310 41.039 558 308 8 10 565 17 555 2.10e-145 432
MsG0380015545.01.T01 MTR_4g033325 41.145 559 302 9 10 564 17 552 9.56e-144 427
MsG0380015545.01.T01 MTR_3g112460 40.714 560 318 7 10 566 9 557 1.69e-143 427
MsG0380015545.01.T01 MTR_3g112470 40.608 559 320 6 10 566 9 557 5.32e-142 423
MsG0380015545.01.T01 MTR_3g069440 40.536 560 321 8 7 561 16 568 1.13e-141 423
MsG0380015545.01.T01 MTR_4g033395 42.520 508 272 8 1 506 9 498 1.55e-138 412
MsG0380015545.01.T01 MTR_4g033330 40.713 533 295 8 10 540 17 530 2.15e-137 410
MsG0380015545.01.T01 MTR_4g033375 42.323 508 273 8 1 506 9 498 5.42e-137 408
MsG0380015545.01.T01 MTR_8g038880 41.379 551 294 8 23 562 19 551 3.82e-133 401
MsG0380015545.01.T01 MTR_3g112450 39.858 562 320 9 13 568 12 561 1.39e-130 394
MsG0380015545.01.T01 MTR_3g014790 38.664 569 304 9 28 579 21 561 4.51e-129 390
MsG0380015545.01.T01 MTR_5g012270 38.393 560 331 9 14 563 19 574 2.87e-128 389
MsG0380015545.01.T01 MTR_5g055000 37.982 545 331 5 24 562 18 561 7.22e-128 387
MsG0380015545.01.T01 MTR_7g065080 38.976 508 293 6 82 585 2 496 3.77e-125 377
MsG0380015545.01.T01 MTR_4g101380 39.199 574 329 10 14 570 17 587 3.11e-124 379
MsG0380015545.01.T01 MTR_7g098210 39.698 529 230 8 43 565 1 446 3.31e-122 368
MsG0380015545.01.T01 MTR_7g088825 36.216 555 338 10 18 561 16 565 7.25e-120 368
MsG0380015545.01.T01 MTR_2g017750 35.274 584 361 7 1 567 11 594 2.57e-119 366
MsG0380015545.01.T01 MTR_7g006540 35.774 601 361 12 1 580 38 634 1.37e-118 365
MsG0380015545.01.T01 MTR_5g038060 37.285 582 340 10 16 582 27 598 3.41e-118 363
MsG0380015545.01.T01 MTR_4g098800 35.472 561 344 8 2 552 14 566 8.70e-118 362
MsG0380015545.01.T01 MTR_5g012290 37.390 567 339 9 14 570 17 577 1.01e-117 362
MsG0380015545.01.T01 MTR_3g462710 41.575 457 261 4 110 562 1 455 1.50e-117 357
MsG0380015545.01.T01 MTR_7g088790 34.872 585 366 8 10 582 15 596 1.58e-117 362
MsG0380015545.01.T01 MTR_7g010820 37.326 576 333 11 5 562 7 572 2.95e-117 360
MsG0380015545.01.T01 MTR_5g014150 34.715 579 357 10 5 569 25 596 6.72e-117 360
MsG0380015545.01.T01 MTR_4g098800 35.472 561 344 8 2 552 79 631 9.10e-117 361
MsG0380015545.01.T01 MTR_7g088820 35.103 584 363 9 13 585 16 594 6.98e-116 357
MsG0380015545.01.T01 MTR_4g033385 40.919 457 250 8 109 563 16 454 2.80e-114 348
MsG0380015545.01.T01 MTR_1g116930 34.991 563 352 9 1 558 1 554 3.53e-113 350
MsG0380015545.01.T01 MTR_7g005930 33.880 549 348 9 16 558 27 566 3.58e-113 350
MsG0380015545.01.T01 MTR_8g087780 35.788 584 351 7 5 568 2 581 6.65e-113 349
MsG0380015545.01.T01 MTR_7g013270 35.390 551 339 9 16 558 82 623 8.25e-113 351
MsG0380015545.01.T01 MTR_5g085850 35.274 584 345 9 4 576 10 571 1.07e-110 343
MsG0380015545.01.T01 MTR_1g085090 35.816 564 336 10 10 564 3 549 7.00e-110 342
MsG0380015545.01.T01 MTR_4g033325 39.348 460 252 9 109 564 18 454 3.65e-109 335
MsG0380015545.01.T01 MTR_8g087810 34.940 581 361 7 5 568 2 582 7.56e-109 338
MsG0380015545.01.T01 MTR_7g111260 36.949 544 325 10 24 563 19 548 5.06e-108 336
MsG0380015545.01.T01 MTR_4g107580 34.615 572 354 10 21 576 21 588 6.09e-108 337
MsG0380015545.01.T01 MTR_7g088820 35.714 532 328 8 65 585 4 532 7.73e-108 334
MsG0380015545.01.T01 MTR_4g033325 39.770 435 243 8 134 564 9 428 7.82e-108 331
MsG0380015545.01.T01 MTR_3g100980 36.823 554 327 9 18 561 10 550 7.73e-106 330
MsG0380015545.01.T01 MTR_8g103233 35.149 569 338 11 1 558 5 553 1.05e-103 325
MsG0380015545.01.T01 MTR_8g469480 33.394 548 346 8 28 561 42 584 1.22e-103 325
MsG0380015545.01.T01 MTR_4g107510 34.489 548 344 9 28 562 40 585 4.01e-103 324
MsG0380015545.01.T01 MTR_2g005130 34.142 577 348 12 2 569 18 571 5.03e-102 321
MsG0380015545.01.T01 MTR_4g114340 36.041 591 352 9 1 582 1 574 1.04e-101 320
MsG0380015545.01.T01 MTR_5g038380 32.180 578 367 9 1 561 5 574 4.41e-101 318
MsG0380015545.01.T01 MTR_6g008690 33.630 562 311 9 30 564 13 539 4.66e-100 314
MsG0380015545.01.T01 MTR_3g100980 35.052 582 327 10 18 561 10 578 1.39e-99 315
MsG0380015545.01.T01 MTR_4g107670 31.325 581 369 11 1 561 1 571 4.07e-99 313
MsG0380015545.01.T01 MTR_1g009200 33.275 568 352 8 4 558 11 564 1.00e-98 312
MsG0380015545.01.T01 MTR_1g026740 32.781 543 347 10 26 558 19 553 2.40e-98 311
MsG0380015545.01.T01 MTR_8g469310 31.088 579 371 8 1 561 3 571 1.57e-97 309
MsG0380015545.01.T01 MTR_2g101650 31.802 566 361 9 6 558 10 563 1.44e-96 307
MsG0380015545.01.T01 MTR_4g123537 32.765 586 373 10 1 579 17 588 9.23e-95 303
MsG0380015545.01.T01 MTR_4g107530 33.157 567 357 11 28 577 37 598 1.95e-93 299
MsG0380015545.01.T01 MTR_7g088820 35.174 489 302 8 107 585 1 484 5.17e-93 294
MsG0380015545.01.T01 MTR_2g101590 32.270 564 344 15 33 570 35 586 3.52e-88 286
MsG0380015545.01.T01 MTR_1g026770 31.261 547 361 8 20 558 11 550 7.50e-88 283
MsG0380015545.01.T01 MTR_1g026750 31.618 544 352 9 26 558 20 554 2.92e-87 282
MsG0380015545.01.T01 MTR_7g064780 30.877 570 377 9 2 559 4 568 2.95e-87 282
MsG0380015545.01.T01 MTR_8g469470 29.101 567 382 7 16 566 24 586 9.63e-87 281
MsG0380015545.01.T01 MTR_2g101610 32.270 564 344 15 33 570 36 587 1.54e-86 282
MsG0380015545.01.T01 MTR_2g101640 33.024 539 340 12 33 558 32 562 4.27e-86 280
MsG0380015545.01.T01 MTR_4g107610 30.324 587 381 11 12 579 14 591 7.76e-85 276
MsG0380015545.01.T01 MTR_4g011280 31.065 573 361 14 1 558 16 569 1.09e-84 276
MsG0380015545.01.T01 MTR_4g024930 30.688 567 355 13 2 558 14 552 1.84e-83 272
MsG0380015545.01.T01 MTR_5g038190 28.187 557 385 6 16 561 16 568 2.16e-77 256
MsG0380015545.01.T01 MTR_7g064800 30.756 569 375 9 24 578 26 589 2.68e-76 254
MsG0380015545.01.T01 MTR_2g101560 31.625 566 357 15 33 580 36 589 3.32e-76 254
MsG0380015545.01.T01 MTR_2g093160 28.647 569 368 12 10 562 2 548 2.53e-72 242
MsG0380015545.01.T01 MTR_2g093640 29.545 572 359 12 10 562 2 548 2.02e-71 239
MsG0380015545.01.T01 MTR_1g057460 28.918 536 347 14 33 558 53 564 2.19e-70 237
MsG0380015545.01.T01 MTR_4g033310 38.658 313 180 5 254 565 190 491 4.29e-69 232
MsG0380015545.01.T01 MTR_4g033310 46.667 180 88 2 10 189 17 188 4.57e-43 161
MsG0380015545.01.T01 MTR_1g057460 29.691 485 311 12 82 558 31 493 3.30e-68 229
MsG0380015545.01.T01 MTR_2g093180 29.913 575 354 13 10 562 2 549 3.50e-67 228
MsG0380015545.01.T01 MTR_7g052600 29.220 551 354 10 9 558 10 525 1.35e-66 226
MsG0380015545.01.T01 MTR_7g051880 29.038 551 355 10 9 558 10 525 4.79e-66 224
MsG0380015545.01.T01 MTR_0236s0050 29.630 486 310 12 82 558 31 493 7.87e-65 221
MsG0380015545.01.T01 MTR_7g051830 28.857 551 354 10 10 558 11 525 1.35e-63 218
MsG0380015545.01.T01 MTR_1g009170 33.415 410 201 14 142 537 3 354 6.00e-52 183
MsG0380015545.01.T01 MTR_3g065350 39.375 160 90 3 329 488 1 153 4.41e-30 116
MsG0380015545.01.T01 MTR_4g033390 37.234 94 59 0 476 569 30 123 1.05e-19 85.5
MsG0380015545.01.T01 MTR_7g064160 37.895 95 59 0 2 96 7 101 1.38e-16 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015545.01.T01 AT2G40460 72.014 586 155 3 1 584 1 579 0.0 860
MsG0380015545.01.T01 AT5G46050 48.881 581 285 6 2 576 5 579 0.0 547
MsG0380015545.01.T01 AT5G46040 49.315 584 280 10 2 578 5 579 0.0 533
MsG0380015545.01.T01 AT5G01180 45.167 569 304 6 1 564 1 566 0.0 532
MsG0380015545.01.T01 AT5G01180 45.167 569 304 6 1 564 1 566 0.0 532
MsG0380015545.01.T01 AT5G01180 45.167 569 304 6 1 564 1 566 0.0 532
MsG0380015545.01.T01 AT3G54140 44.561 570 310 4 1 566 1 568 1.90e-179 519
MsG0380015545.01.T01 AT3G54140 44.561 570 310 4 1 566 1 568 1.90e-179 519
MsG0380015545.01.T01 AT2G02040 42.908 564 315 5 7 565 24 585 1.80e-171 499
MsG0380015545.01.T01 AT1G62200 43.594 562 299 6 9 562 37 588 3.10e-167 489
MsG0380015545.01.T01 AT1G62200 41.554 592 299 7 8 562 36 617 2.09e-161 475
MsG0380015545.01.T01 AT1G62200 41.554 592 299 7 8 562 50 631 2.13e-161 475
MsG0380015545.01.T01 AT2G02020 40.497 563 295 7 2 562 20 544 4.96e-150 443
MsG0380015545.01.T01 AT3G53960 37.563 591 352 9 2 586 15 594 3.48e-146 435
MsG0380015545.01.T01 AT2G37900 39.184 564 326 7 2 561 16 566 3.03e-144 429
MsG0380015545.01.T01 AT2G02020 39.432 563 280 8 2 562 20 523 1.09e-141 421
MsG0380015545.01.T01 AT3G54450 40.659 546 299 9 26 562 14 543 2.28e-140 419
MsG0380015545.01.T01 AT5G46050 47.146 473 238 6 110 576 1 467 9.57e-140 414
MsG0380015545.01.T01 AT1G22540 39.388 556 318 6 12 565 18 556 9.36e-138 412
MsG0380015545.01.T01 AT1G72140 38.681 561 305 8 12 562 22 553 4.83e-136 408
MsG0380015545.01.T01 AT1G72120 41.208 563 308 8 4 562 10 553 9.51e-136 407
MsG0380015545.01.T01 AT1G72125 41.030 563 313 9 4 562 10 557 3.93e-135 405
MsG0380015545.01.T01 AT1G22570 39.823 565 318 7 5 562 12 561 8.06e-135 405
MsG0380015545.01.T01 AT1G68570 38.796 598 344 8 2 582 3 595 8.93e-133 400
MsG0380015545.01.T01 AT1G22550 39.046 566 320 9 5 562 12 560 8.90e-131 394
MsG0380015545.01.T01 AT1G68570 40.036 562 317 7 38 582 7 565 1.55e-130 394
MsG0380015545.01.T01 AT1G72130 38.971 544 297 7 25 565 26 537 9.67e-127 383
MsG0380015545.01.T01 AT2G37900 39.880 499 283 7 67 561 2 487 7.11e-126 379
MsG0380015545.01.T01 AT1G22570 39.626 535 302 6 35 562 4 524 6.86e-125 378
MsG0380015545.01.T01 AT2G26690 38.256 562 324 9 1 552 1 549 7.89e-115 354
MsG0380015545.01.T01 AT3G21670 37.123 563 320 9 14 563 19 560 9.35e-115 354
MsG0380015545.01.T01 AT1G12110 35.862 580 351 10 2 569 5 575 4.28e-113 350
MsG0380015545.01.T01 AT1G32450 35.377 571 345 11 5 558 18 581 6.09e-113 350
MsG0380015545.01.T01 AT1G69870 36.036 555 333 7 21 561 48 594 1.79e-112 349
MsG0380015545.01.T01 AT5G13400 35.951 573 349 10 13 570 52 621 4.98e-111 345
MsG0380015545.01.T01 AT4G21680 34.843 574 356 9 5 565 9 577 1.20e-110 343
MsG0380015545.01.T01 AT1G18880 34.829 557 343 9 28 569 23 574 6.37e-108 336
MsG0380015545.01.T01 AT1G59740 34.225 561 354 7 2 555 19 571 8.16e-106 331
MsG0380015545.01.T01 AT5G14940 34.220 564 338 11 24 572 7 552 5.87e-104 325
MsG0380015545.01.T01 AT2G26690 37.951 527 304 9 36 552 3 516 9.19e-104 324
MsG0380015545.01.T01 AT1G69850 31.491 597 365 10 1 566 1 584 1.00e-103 325
MsG0380015545.01.T01 AT1G33440 34.655 580 346 10 1 566 15 575 4.03e-102 322
MsG0380015545.01.T01 AT1G52190 33.161 579 344 13 2 558 9 566 1.33e-101 320
MsG0380015545.01.T01 AT2G26690 37.984 516 297 9 47 552 2 504 1.01e-100 316
MsG0380015545.01.T01 AT5G19640 33.272 541 335 11 25 558 60 581 5.98e-100 316
MsG0380015545.01.T01 AT1G72130 38.979 431 235 6 138 565 14 419 1.55e-99 309
MsG0380015545.01.T01 AT1G72130 38.979 431 235 6 138 565 14 419 1.55e-99 309
MsG0380015545.01.T01 AT1G27040 32.258 558 361 7 10 560 9 556 1.92e-97 308
MsG0380015545.01.T01 AT1G27040 32.258 558 361 7 10 560 13 560 2.03e-97 308
MsG0380015545.01.T01 AT3G47960 35.219 548 337 10 28 561 65 608 3.76e-95 305
MsG0380015545.01.T01 AT3G01350 32.281 570 341 12 26 569 9 559 2.87e-94 300
MsG0380015545.01.T01 AT5G62680 33.276 580 357 10 4 567 33 598 6.89e-94 300
MsG0380015545.01.T01 AT1G27040 32.402 537 346 7 31 560 2 528 1.82e-93 297
MsG0380015545.01.T01 AT3G16180 34.438 543 330 13 33 558 32 565 2.70e-93 298
MsG0380015545.01.T01 AT3G25260 32.418 546 327 10 14 558 11 515 8.26e-87 279
MsG0380015545.01.T01 AT5G28470 32.136 557 342 14 21 558 14 553 8.89e-86 278
MsG0380015545.01.T01 AT3G45650 29.663 563 364 9 8 562 6 544 3.05e-85 276
MsG0380015545.01.T01 AT5G62730 29.711 589 352 9 2 563 34 587 4.78e-85 276
MsG0380015545.01.T01 AT1G27080 32.118 576 361 11 24 584 14 574 6.32e-85 276
MsG0380015545.01.T01 AT1G69860 32.784 546 347 10 28 566 22 554 1.10e-83 272
MsG0380015545.01.T01 AT5G28470 31.777 557 342 15 21 558 14 551 1.82e-83 271
MsG0380015545.01.T01 AT3G45660 31.439 528 330 8 43 562 40 543 5.14e-83 270
MsG0380015545.01.T01 AT3G45660 31.439 528 330 8 43 562 40 543 5.14e-83 270
MsG0380015545.01.T01 AT3G45660 31.439 528 330 8 43 562 61 564 8.46e-83 270
MsG0380015545.01.T01 AT5G62730 29.768 561 332 9 30 563 3 528 9.34e-81 264
MsG0380015545.01.T01 AT3G25280 30.341 557 348 9 5 558 2 521 1.16e-80 263
MsG0380015545.01.T01 AT3G45650 28.353 589 364 10 8 562 6 570 1.58e-79 262
MsG0380015545.01.T01 AT3G45680 29.772 571 362 13 10 569 8 550 1.07e-76 254
MsG0380015545.01.T01 AT1G27080 31.927 545 341 11 55 584 3 532 5.42e-76 251
MsG0380015545.01.T01 AT3G45720 30.492 528 329 13 46 562 41 541 5.41e-71 238
MsG0380015545.01.T01 AT3G45700 27.848 553 352 11 23 562 15 533 6.11e-70 236
MsG0380015545.01.T01 AT3G45710 28.421 570 365 14 8 562 4 545 8.26e-70 236
MsG0380015545.01.T01 AT3G45690 29.926 538 310 16 23 553 17 494 6.32e-66 224
MsG0380015545.01.T01 AT2G38100 26.577 523 328 17 52 558 2 484 9.37e-40 152
MsG0380015545.01.T01 AT2G38100 26.577 523 328 17 52 558 18 500 2.86e-39 151
MsG0380015545.01.T01 AT2G38100 26.577 523 328 17 52 558 24 506 3.17e-39 151
MsG0380015545.01.T01 AT5G11570 33.077 260 158 7 303 558 229 476 7.86e-33 132
MsG0380015545.01.T01 AT5G11570 28.333 240 150 6 16 247 15 240 1.15e-26 114

Find 146 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCACTTAGATTACTATTA+TGG 0.130549 3:+71652179 MsG0380015545.01.T01:CDS
TTTCAATGCCATTGGATTAT+TGG 0.142348 3:+71651989 MsG0380015545.01.T01:CDS
TGTATATTTAATATCTTTAA+TGG 0.162276 3:+71647910 MsG0380015545.01.T01:exon
AAATGGAACATTGTGTTCTT+AGG 0.167140 3:+71649517 MsG0380015545.01.T01:CDS
TCCTCATGAGAAAGAGTTAA+AGG 0.194574 3:+71649209 MsG0380015545.01.T01:CDS
TAAAGGCTTCTTTCTTTAAT+TGG 0.203778 3:+71649226 MsG0380015545.01.T01:CDS
TGCTGGTTTATTATTGTCTT+TGG 0.212439 3:+71649347 MsG0380015545.01.T01:CDS
AGCCTTCCATTTCCCAGTTT+TGG 0.219265 3:-71647996 None:intergenic
GCACCAAAAGTTGAGATATT+TGG 0.221917 3:-71649165 None:intergenic
TTACCACAATATGTTCTTAT+TGG 0.230143 3:+71651954 MsG0380015545.01.T01:CDS
ATTCTTACCTGGGTCGCTTC+TGG 0.236583 3:+71648325 MsG0380015545.01.T01:CDS
GTGCCTTAATTGCAACTTTA+GGG 0.240529 3:+71649271 MsG0380015545.01.T01:CDS
TTGTCCCTATGAGTATATTT+TGG 0.246334 3:+71651928 MsG0380015545.01.T01:CDS
GTATATATTCAAGAGAATTT+AGG 0.251074 3:+71649297 MsG0380015545.01.T01:CDS
GGTGCCTTAATTGCAACTTT+AGG 0.256324 3:+71649270 MsG0380015545.01.T01:CDS
AAGCCCTAAAGTTGCAATTA+AGG 0.273762 3:-71649274 None:intergenic
CCAAGACTTTGCATGTCTTC+AGG 0.277774 3:-71652032 None:intergenic
CTAACTTTGTGTCGATAAAT+TGG 0.279561 3:-71649390 None:intergenic
CCTGCTGTTCCATCCAAAAC+TGG 0.284363 3:+71647983 MsG0380015545.01.T01:CDS
TCTACTTGATTTACTGTCAT+TGG 0.286034 3:-71651528 None:intergenic
ATCATGGGTATAGTCTTCTT+TGG 0.286104 3:-71647936 None:intergenic
CTCACTTAGATTACTATTAT+GGG 0.299840 3:+71652180 MsG0380015545.01.T01:CDS
AAACCAAATATCTCAACTTT+TGG 0.301836 3:+71649162 MsG0380015545.01.T01:CDS
TCTAGAGAAAATTTCAAGTA+TGG 0.309470 3:+71652422 MsG0380015545.01.T01:three_prime_UTR
TTAGGATGGGGACTTGGATA+TGG 0.322007 3:+71649315 MsG0380015545.01.T01:CDS
CACTGATTCCAAGCACCATT+TGG 0.336231 3:+71651595 MsG0380015545.01.T01:CDS
TTTGAAAGGATGGCCTTCTA+TGG 0.336648 3:+71648174 MsG0380015545.01.T01:CDS
TCAGTGTTACTAACCATATT+AGG 0.340683 3:-71651578 None:intergenic
AACAAGTTAATTAAGTAGAT+AGG 0.342754 3:+71652503 MsG0380015545.01.T01:three_prime_UTR
TCCTTGGTATGCTCCTAATA+TGG 0.344882 3:+71651565 MsG0380015545.01.T01:CDS
GTTTGGATAACACCAATTCT+TGG 0.350998 3:+71648288 MsG0380015545.01.T01:CDS
ATTGTGTTCTTAGGGGAAAA+AGG 0.352987 3:+71649526 MsG0380015545.01.T01:CDS
CTCATCTCTCATTTATGTCT+TGG 0.355515 3:+71648359 MsG0380015545.01.T01:CDS
AATGGAACATTGTGTTCTTA+GGG 0.364466 3:+71649518 MsG0380015545.01.T01:CDS
AGGACCAAGGTTTCTGTCTA+AGG 0.369834 3:-71651655 None:intergenic
ACTTTCTTCACAAGTGGAAT+TGG 0.371149 3:+71652059 MsG0380015545.01.T01:CDS
GAGGATTAAAATCATCAAAT+TGG 0.372384 3:-71649191 None:intergenic
CTTGTCAAGTGTTAATTTGT+TGG 0.372916 3:+71652214 MsG0380015545.01.T01:CDS
AGGAATGTTAATACATGGTC+AGG 0.381248 3:+71648261 MsG0380015545.01.T01:CDS
CTTCTTGAGGAACCAGTTGT+AGG 0.391292 3:-71651501 None:intergenic
AACAACCAAAATATACTCAT+AGG 0.391678 3:-71651933 None:intergenic
TTACTTCAAAGACTTGGAAT+AGG 0.391905 3:+71651807 MsG0380015545.01.T01:CDS
CAATTTATCGACACAAAGTT+AGG 0.392936 3:+71649391 MsG0380015545.01.T01:CDS
CTGCGCCGTGCAACGATTGT+AGG 0.392972 3:-71652376 None:intergenic
AAGATACTGTTTCATCAGTT+AGG 0.396676 3:+71648241 MsG0380015545.01.T01:CDS
AATGGAAGGTAATTCAACTT+TGG 0.407537 3:+71652310 MsG0380015545.01.T01:CDS
ATACATGGTCAGGGTCTGTT+TGG 0.412198 3:+71648271 MsG0380015545.01.T01:CDS
AGAAGCACTTTGTGTTCAAA+TGG 0.412642 3:+71652292 MsG0380015545.01.T01:CDS
TTCCATCCAAAACTGGGAAA+TGG 0.419022 3:+71647990 MsG0380015545.01.T01:CDS
GTTTGATGCAACTCCATAGA+AGG 0.419937 3:-71648187 None:intergenic
CTTCATGAAGTTGTGTTGTA+AGG 0.420306 3:-71648221 None:intergenic
ACAATGACTGATAAGATAAC+AGG 0.426895 3:+71652113 MsG0380015545.01.T01:CDS
CTATGGAGTTGCATCAAACT+TGG 0.433756 3:+71648191 MsG0380015545.01.T01:CDS
CTCATAGGGACAATATCTTT+AGG 0.436414 3:-71651918 None:intergenic
TCACAAGTGGAATTGGTGTT+GGG 0.437948 3:+71652066 MsG0380015545.01.T01:CDS
TTCACAAGTGGAATTGGTGT+TGG 0.438075 3:+71652065 MsG0380015545.01.T01:CDS
ATGACAGTAAATCAAGTAGA+AGG 0.439592 3:+71651531 MsG0380015545.01.T01:CDS
CCGTTCATGCGCCAGAAAAC+CGG 0.443452 3:+71651765 MsG0380015545.01.T01:CDS
GCACTTTACACAATGGCAAT+TGG 0.443556 3:+71649126 MsG0380015545.01.T01:CDS
ACTGATTCCAAGCACCATTT+GGG 0.443685 3:+71651596 MsG0380015545.01.T01:CDS
TCAACTTTGGATGCATCTCT+TGG 0.444482 3:+71652323 MsG0380015545.01.T01:CDS
CAAATTCCATTTGTGCATGT+TGG 0.447193 3:-71649063 None:intergenic
TGTAGATCTGAAGGGTTACT+AGG 0.449676 3:-71649486 None:intergenic
ACACTTGCTTACCTCAAAGT+TGG 0.452079 3:-71649564 None:intergenic
TGCGCCGTGCAACGATTGTA+GGG 0.452822 3:-71652375 None:intergenic
TCTATCACACTCCAACTTTG+AGG 0.456422 3:+71649553 MsG0380015545.01.T01:CDS
AGGCTTCTTTCTTTAATTGG+TGG 0.457739 3:+71649229 MsG0380015545.01.T01:CDS
TGTGATTCCTCTCGGGTGGC+CGG 0.458648 3:-71651784 None:intergenic
GAGAATTTAGGATGGGGACT+TGG 0.459132 3:+71649309 MsG0380015545.01.T01:CDS
TGAAGTAATGTGATTCCTCT+CGG 0.459981 3:-71651792 None:intergenic
GGATATGGTATTCCTACTGC+TGG 0.460012 3:+71649330 MsG0380015545.01.T01:CDS
CGTTGCACGGCGCAGTGCCA+TGG 0.461082 3:+71652384 MsG0380015545.01.T01:three_prime_UTR
GCAATGTAAGCACCAAGAAT+TGG 0.467213 3:-71648300 None:intergenic
GTTGCACGGCGCAGTGCCAT+GGG 0.469791 3:+71652385 MsG0380015545.01.T01:three_prime_UTR
ATTAAAGAAGATCCTACAAC+TGG 0.473810 3:+71651489 MsG0380015545.01.T01:CDS
CACTGAGAGCAGCATGGATA+GGG 0.474994 3:-71651718 None:intergenic
CAATTGCAATGGCTATGATC+TGG 0.475158 3:-71651839 None:intergenic
TTACATTGCAGATTCTTACC+TGG 0.476724 3:+71648314 MsG0380015545.01.T01:CDS
AGATCTACATGAGTTTCAAA+TGG 0.478491 3:+71649500 MsG0380015545.01.T01:CDS
TAAATTATGTGTGTAATCAA+TGG 0.480285 3:+71652573 MsG0380015545.01.T01:three_prime_UTR
CCTGAAGACATGCAAAGTCT+TGG 0.489343 3:+71652032 MsG0380015545.01.T01:CDS
TACACAATGGCAATTGGTGC+AGG 0.489428 3:+71649132 MsG0380015545.01.T01:CDS
TTGAAACCAACATGCACAAA+TGG 0.494777 3:+71649057 MsG0380015545.01.T01:CDS
TACATTGCAGATTCTTACCT+GGG 0.494969 3:+71648315 MsG0380015545.01.T01:CDS
GGAAATCAACAGTTCCATCA+TGG 0.497099 3:-71647952 None:intergenic
TGTCATTGGTGCTCTTCTTG+AGG 0.497730 3:-71651514 None:intergenic
TAATTTACAAACTATTACAC+AGG 0.502220 3:-71652557 None:intergenic
ATTTGTGCCCAAATGGTGCT+TGG 0.502978 3:-71651603 None:intergenic
ACAAGTTAATTAAGTAGATA+GGG 0.507033 3:+71652504 MsG0380015545.01.T01:three_prime_UTR
GAAGGAGCAAAGCTAATCCT+TGG 0.508830 3:+71651549 MsG0380015545.01.T01:CDS
TGAAACTCATGTAGATCTGA+AGG 0.512547 3:-71649495 None:intergenic
ATCACATTACTTCAAAGACT+TGG 0.515956 3:+71651801 MsG0380015545.01.T01:CDS
GCTAGTGATATATCAAAGAA+AGG 0.516038 3:-71647844 None:intergenic
GAAGTAATGTGATTCCTCTC+GGG 0.522163 3:-71651791 None:intergenic
AAAATCCCAGCAGCATCTCT+AGG 0.522560 3:+71651684 MsG0380015545.01.T01:CDS
AGTGTTGATTTGTGCCCAAA+TGG 0.524157 3:-71651610 None:intergenic
AAGTAGATACATTTACAAGA+AGG 0.524961 3:+71652253 MsG0380015545.01.T01:CDS
GCCTTTAACTCTTTCTCATG+AGG 0.529898 3:-71649210 None:intergenic
GGAACAACTTTCTTCACAAG+TGG 0.532928 3:+71652053 MsG0380015545.01.T01:CDS
GCACTGAGAGCAGCATGGAT+AGG 0.533967 3:-71651719 None:intergenic
GCACTTTGTGTTCAAATGGA+AGG 0.535871 3:+71652296 MsG0380015545.01.T01:CDS
AAAGAAGACTATACCCATGA+TGG 0.538056 3:+71647938 MsG0380015545.01.T01:CDS
GAAGAGGGACTAGAAAGAGT+TGG 0.543314 3:+71652135 MsG0380015545.01.T01:CDS
GACATCTAAAAGTCCTGCTA+AGG 0.544118 3:+71649413 MsG0380015545.01.T01:CDS
ACACGAATTATATCCTTAGC+AGG 0.545832 3:-71649426 None:intergenic
ACTGATAAGATAACAGGAAG+AGG 0.551715 3:+71652119 MsG0380015545.01.T01:CDS
GAAATCAACAGTTCCATCAT+GGG 0.552746 3:-71647951 None:intergenic
AGCTGCCTAGAGATGCTGCT+GGG 0.554054 3:-71651689 None:intergenic
TATTCAAGAGAATTTAGGAT+GGG 0.557111 3:+71649302 MsG0380015545.01.T01:CDS
CTGCTGTTCCATCCAAAACT+GGG 0.558606 3:+71647984 MsG0380015545.01.T01:CDS
ACAACCAAAATATACTCATA+GGG 0.560334 3:-71651932 None:intergenic
CAGTTAGGAATGTTAATACA+TGG 0.561918 3:+71648256 MsG0380015545.01.T01:CDS
GTATGAAGCATTTGAAAGGA+TGG 0.563974 3:+71648164 MsG0380015545.01.T01:CDS
CAGGGTATGAAGCATTTGAA+AGG 0.571557 3:+71648160 MsG0380015545.01.T01:intron
AAGCTGCCTAGAGATGCTGC+TGG 0.575379 3:-71651690 None:intergenic
TCTTGGCTTACAAGTATGAG+AGG 0.577434 3:+71652340 MsG0380015545.01.T01:exon
TCTCAGTGCCAATGTATGAC+CGG 0.581455 3:+71651733 MsG0380015545.01.T01:CDS
TGAAAGTCCAGAAGCGACCC+AGG 0.586084 3:-71648332 None:intergenic
GATGGAACTGTTGATTTCCA+CGG 0.587530 3:+71647956 MsG0380015545.01.T01:CDS
ATGGAACAGCAGGTTTGCCG+TGG 0.589059 3:-71647973 None:intergenic
GACATAAATGAGAGATGAGA+GGG 0.589839 3:-71648355 None:intergenic
GACAATAATAAACCAGCAGT+AGG 0.594102 3:-71649342 None:intergenic
ACAATGGCAATTGGTGCAGG+TGG 0.594161 3:+71649135 MsG0380015545.01.T01:CDS
ATATTCAAGAGAATTTAGGA+TGG 0.594332 3:+71649301 MsG0380015545.01.T01:CDS
GAAGAATTCCAATAATCCAA+TGG 0.598605 3:-71651997 None:intergenic
GAAACTCATGTAGATCTGAA+GGG 0.608617 3:-71649494 None:intergenic
ATTCAAGAGAATTTAGGATG+GGG 0.609796 3:+71649303 MsG0380015545.01.T01:CDS
ACTACCTTAGACAGAAACCT+TGG 0.616776 3:+71651651 MsG0380015545.01.T01:CDS
ATCCAAAACTGGGAAATGGA+AGG 0.616857 3:+71647994 MsG0380015545.01.T01:CDS
CACAAATGGAATTTGCAACA+AGG 0.617097 3:+71649071 MsG0380015545.01.T01:CDS
GATAGATGTAACGGTCCCCA+TGG 0.618804 3:-71652401 None:intergenic
GTAATGTGATTCCTCTCGGG+TGG 0.620286 3:-71651788 None:intergenic
ATGGAACATTGTGTTCTTAG+GGG 0.621544 3:+71649519 MsG0380015545.01.T01:CDS
CAGAAAACCGGCCACCCGAG+AGG 0.625344 3:+71651777 MsG0380015545.01.T01:CDS
CTGATAAGATAACAGGAAGA+GGG 0.626089 3:+71652120 MsG0380015545.01.T01:CDS
CTACACAGCACTTTACACAA+TGG 0.627388 3:+71649119 MsG0380015545.01.T01:CDS
TACTGCATAAGCAATTGCAA+TGG 0.627930 3:-71651850 None:intergenic
AGACATAAATGAGAGATGAG+AGG 0.629204 3:-71648356 None:intergenic
CATTGGCACTGAGAGCAGCA+TGG 0.639366 3:-71651724 None:intergenic
ATACCAATAAGAACATATTG+TGG 0.640019 3:-71651957 None:intergenic
GATCCCCTACAATCGTTGCA+CGG 0.668060 3:+71652371 MsG0380015545.01.T01:three_prime_UTR
AATTTACAAACTATTACACA+GGG 0.669465 3:-71652556 None:intergenic
GGAATGTTAATACATGGTCA+GGG 0.669674 3:+71648262 MsG0380015545.01.T01:CDS
GCGCCGTGCAACGATTGTAG+GGG 0.684389 3:-71652374 None:intergenic
TTGCACGGCGCAGTGCCATG+GGG 0.685830 3:+71652386 MsG0380015545.01.T01:three_prime_UTR
ACCATATTAGGAGCATACCA+AGG 0.712720 3:-71651566 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATGAATATTTCAAAA+AGG + Chr3:71649697-71649716 MsG0380015545.01.T01:intron 10.0%
!! AATTAATTGTTTATATTATG+GGG + Chr3:71648089-71648108 MsG0380015545.01.T01:intron 10.0%
!! TACTTATATATATTAATTCA+GGG + Chr3:71648142-71648161 MsG0380015545.01.T01:intron 10.0%
!! TGTATATTTAATATCTTTAA+TGG + Chr3:71647910-71647929 MsG0380015545.01.T01:exon 10.0%
!! TTAATAAAAGAATAGTTATA+GGG - Chr3:71651064-71651083 None:intergenic 10.0%
!! TTACTTATATATATTAATTC+AGG + Chr3:71648141-71648160 MsG0380015545.01.T01:intron 10.0%
!! TTTAATAAAAGAATAGTTAT+AGG - Chr3:71651065-71651084 None:intergenic 10.0%
!!! ATAAAAATATGTCAATTTTA+AGG - Chr3:71651384-71651403 None:intergenic 10.0%
!!! TTTTTTTTTTTATTTGGATT+TGG - Chr3:71652451-71652470 None:intergenic 10.0%
!! AAAGACAAAAATAAAGTATA+AGG - Chr3:71647887-71647906 None:intergenic 15.0%
!! ATATATAAGTAAAAACCTAT+AGG - Chr3:71648133-71648152 None:intergenic 15.0%
!! ATTAATAATTCATGTTAACA+AGG - Chr3:71648475-71648494 None:intergenic 15.0%
!! GTTAAATCAAATGTAATAAT+CGG + Chr3:71650617-71650636 MsG0380015545.01.T01:intron 15.0%
!! GTTATCTGAATATTAAATTT+GGG + Chr3:71650326-71650345 MsG0380015545.01.T01:intron 15.0%
!! TGAAGTTATAACTTTATAAT+CGG - Chr3:71648418-71648437 None:intergenic 15.0%
!! TGTTATCTGAATATTAAATT+TGG + Chr3:71650325-71650344 MsG0380015545.01.T01:intron 15.0%
!! TTAAATCAAATGTAATAATC+GGG + Chr3:71650618-71650637 MsG0380015545.01.T01:intron 15.0%
!! TTATCTGAATATTAAATTTG+GGG + Chr3:71650327-71650346 MsG0380015545.01.T01:intron 15.0%
!! TTTATTTGCTTAATTAACAA+GGG + Chr3:71650211-71650230 MsG0380015545.01.T01:intron 15.0%
!!! ATTAGATTTGAGTTAATATT+AGG - Chr3:71648392-71648411 None:intergenic 15.0%
!!! GATAAATAATGGTAAATTTT+GGG + Chr3:71650026-71650045 MsG0380015545.01.T01:intron 15.0%
!!! TGATAAATAATGGTAAATTT+TGG + Chr3:71650025-71650044 MsG0380015545.01.T01:intron 15.0%
!!! TTTTATCATCAATATTTCTT+AGG + Chr3:71651398-71651417 MsG0380015545.01.T01:intron 15.0%
!! AACAAGTTAATTAAGTAGAT+AGG + Chr3:71652503-71652522 MsG0380015545.01.T01:three_prime_UTR 20.0%
!! AATTTACAAACTATTACACA+GGG - Chr3:71652559-71652578 None:intergenic 20.0%
!! ACAAGTTAATTAAGTAGATA+GGG + Chr3:71652504-71652523 MsG0380015545.01.T01:three_prime_UTR 20.0%
!! AGTGAAAAAAAAAAAGACTT+TGG - Chr3:71649615-71649634 None:intergenic 20.0%
!! ATATTCAGATAACATATTTG+TGG - Chr3:71650319-71650338 None:intergenic 20.0%
!! ATATTCATAATTTCATAGAC+CGG - Chr3:71649690-71649709 None:intergenic 20.0%
!! GCTATATATCATAAATAAGT+TGG - Chr3:71648810-71648829 None:intergenic 20.0%
!! GTATATATTCAAGAGAATTT+AGG + Chr3:71649297-71649316 MsG0380015545.01.T01:CDS 20.0%
!! GTGAAAAAAAAAAAGACTTT+GGG - Chr3:71649614-71649633 None:intergenic 20.0%
!! TAAATTATGTGTGTAATCAA+TGG + Chr3:71652573-71652592 MsG0380015545.01.T01:three_prime_UTR 20.0%
!! TAATTTACAAACTATTACAC+AGG - Chr3:71652560-71652579 None:intergenic 20.0%
!!! ATAAAAGAGAATCACATTTT+TGG + Chr3:71651894-71651913 MsG0380015545.01.T01:CDS 20.0%
!!! ATAAGTGTACAATTTTATAC+AGG + Chr3:71650363-71650382 MsG0380015545.01.T01:intron 20.0%
!!! ATTTTTTTTCCATCAATTCA+AGG - Chr3:71648855-71648874 None:intergenic 20.0%
!!! CATTTAATTTTTCGATCTAA+AGG + Chr3:71650285-71650304 MsG0380015545.01.T01:intron 20.0%
!!! CTTTATTTGCTTAATTAACA+AGG + Chr3:71650210-71650229 MsG0380015545.01.T01:intron 20.0%
!!! CTTTGGTTATTTTCTATATT+GGG + Chr3:71649364-71649383 MsG0380015545.01.T01:CDS 20.0%
!!! TCTTTGGTTATTTTCTATAT+TGG + Chr3:71649363-71649382 MsG0380015545.01.T01:CDS 20.0%
!!! TTAAGAACTTGCTATTAATT+TGG - Chr3:71649802-71649821 None:intergenic 20.0%
!!! TTTCATACTTGTTATTTTTG+TGG - Chr3:71652484-71652503 None:intergenic 20.0%
! AAAGATAAGTAAATGAGTTG+AGG - Chr3:71650651-71650670 None:intergenic 25.0%
! AACAACCAAAATATACTCAT+AGG - Chr3:71651936-71651955 None:intergenic 25.0%
! AAGTAGATACATTTACAAGA+AGG + Chr3:71652253-71652272 MsG0380015545.01.T01:CDS 25.0%
! ACAACCAAAATATACTCATA+GGG - Chr3:71651935-71651954 None:intergenic 25.0%
! ATACCAATAAGAACATATTG+TGG - Chr3:71651960-71651979 None:intergenic 25.0%
! ATATTCAAGAGAATTTAGGA+TGG + Chr3:71649301-71649320 MsG0380015545.01.T01:CDS 25.0%
! ATGAATATTTCAAAAAGGTC+TGG + Chr3:71649702-71649721 MsG0380015545.01.T01:intron 25.0%
! ATGAATGTGAATATAGAAAG+TGG + Chr3:71650105-71650124 MsG0380015545.01.T01:intron 25.0%
! ATTACTTGAGTTAAGATTTG+TGG - Chr3:71650582-71650601 None:intergenic 25.0%
! CTCACTTAGATTACTATTAT+GGG + Chr3:71652180-71652199 MsG0380015545.01.T01:CDS 25.0%
! GAGGATTAAAATCATCAAAT+TGG - Chr3:71649194-71649213 None:intergenic 25.0%
! TAAAGGCTTCTTTCTTTAAT+TGG + Chr3:71649226-71649245 MsG0380015545.01.T01:CDS 25.0%
! TATATATAGCATGATCCTAT+AGG + Chr3:71648115-71648134 MsG0380015545.01.T01:intron 25.0%
! TCTCACTTAGATTACTATTA+TGG + Chr3:71652179-71652198 MsG0380015545.01.T01:CDS 25.0%
! TTACCACAATATGTTCTTAT+TGG + Chr3:71651954-71651973 MsG0380015545.01.T01:CDS 25.0%
!! AAACCAAATATCTCAACTTT+TGG + Chr3:71649162-71649181 MsG0380015545.01.T01:CDS 25.0%
!! AAGCATAGCAATTTAAAACA+AGG - Chr3:71648696-71648715 None:intergenic 25.0%
!! ACTTGAGTTTAGTTTAGTAT+CGG - Chr3:71651209-71651228 None:intergenic 25.0%
!! CTTAATTTGATAACCAATTC+AGG + Chr3:71651448-71651467 MsG0380015545.01.T01:intron 25.0%
!! TATTCAAGAGAATTTAGGAT+GGG + Chr3:71649302-71649321 MsG0380015545.01.T01:CDS 25.0%
!! TCTAGAGAAAATTTCAAGTA+TGG + Chr3:71652422-71652441 MsG0380015545.01.T01:three_prime_UTR 25.0%
!! TTGAAGTTTTCTATTCTTGA+AGG - Chr3:71649463-71649482 None:intergenic 25.0%
!! TTTTCTCTAGATAGATGTAA+CGG - Chr3:71652413-71652432 None:intergenic 25.0%
!!! AAATTTTGGGACCATAAAAT+TGG + Chr3:71650039-71650058 MsG0380015545.01.T01:intron 25.0%
!!! AATAATCCTTAGTTTTTGTG+GGG - Chr3:71650405-71650424 None:intergenic 25.0%
!!! CAATAATCCTTAGTTTTTGT+GGG - Chr3:71650406-71650425 None:intergenic 25.0%
!!! GAATTTCTTGAACAGTTTTT+TGG + Chr3:71652088-71652107 MsG0380015545.01.T01:CDS 25.0%
!!! GTTGAGTATTGGTATTTTAT+AGG + Chr3:71650953-71650972 MsG0380015545.01.T01:intron 25.0%
!!! TAATTTGTTGGTGTTTTTGT+GGG + Chr3:71652226-71652245 MsG0380015545.01.T01:CDS 25.0%
!!! TTAATTTGTTGGTGTTTTTG+TGG + Chr3:71652225-71652244 MsG0380015545.01.T01:CDS 25.0%
!!! TTTTTTCCGTGAATTTAAAC+AGG + Chr3:71649970-71649989 MsG0380015545.01.T01:intron 25.0%
!!! TTTTTTTTTCACTTTGCATG+AGG + Chr3:71649622-71649641 MsG0380015545.01.T01:intron 25.0%
AAAACAACCAAGCCTTAAAT+GGG - Chr3:71651146-71651165 None:intergenic 30.0%
AAATCAAGTGCGTATCTATT+TGG + Chr3:71651236-71651255 MsG0380015545.01.T01:intron 30.0%
AAATGGAACATTGTGTTCTT+AGG + Chr3:71649517-71649536 MsG0380015545.01.T01:CDS 30.0%
AAATTGCTATGCTTACCAAT+TGG + Chr3:71648702-71648721 MsG0380015545.01.T01:intron 30.0%
AAGATACTGTTTCATCAGTT+AGG + Chr3:71648241-71648260 MsG0380015545.01.T01:CDS 30.0%
AATGGAACATTGTGTTCTTA+GGG + Chr3:71649518-71649537 MsG0380015545.01.T01:CDS 30.0%
AATGGAAGGTAATTCAACTT+TGG + Chr3:71652310-71652329 MsG0380015545.01.T01:CDS 30.0%
ACAATGACTGATAAGATAAC+AGG + Chr3:71652113-71652132 MsG0380015545.01.T01:CDS 30.0%
ACTCTATTAAACTGTCAAGT+TGG - Chr3:71649848-71649867 None:intergenic 30.0%
ACTCTTATGAATGATCACTT+TGG + Chr3:71648876-71648895 MsG0380015545.01.T01:intron 30.0%
AGATCTACATGAGTTTCAAA+TGG + Chr3:71649500-71649519 MsG0380015545.01.T01:CDS 30.0%
ATAGTGAACAATCTTGTCTT+TGG - Chr3:71650840-71650859 None:intergenic 30.0%
ATAGTTAAGAGTTTGTCTAG+TGG - Chr3:71650922-71650941 None:intergenic 30.0%
ATCACATTACTTCAAAGACT+TGG + Chr3:71651801-71651820 MsG0380015545.01.T01:CDS 30.0%
ATGACAGTAAATCAAGTAGA+AGG + Chr3:71651531-71651550 MsG0380015545.01.T01:CDS 30.0%
ATGATGTTTGAGCAGTAAAA+TGG - Chr3:71650440-71650459 None:intergenic 30.0%
ATTAAAGAAGATCCTACAAC+TGG + Chr3:71651489-71651508 MsG0380015545.01.T01:CDS 30.0%
ATTTGCTTAATTAACAAGGG+TGG + Chr3:71650214-71650233 MsG0380015545.01.T01:intron 30.0%
CAATTTATCGACACAAAGTT+AGG + Chr3:71649391-71649410 MsG0380015545.01.T01:CDS 30.0%
CAGTTAGGAATGTTAATACA+TGG + Chr3:71648256-71648275 MsG0380015545.01.T01:CDS 30.0%
CATAAAATTGGATGGAGAAA+AGG + Chr3:71650051-71650070 MsG0380015545.01.T01:intron 30.0%
CATTGTGAAACATAGTGATT+TGG - Chr3:71649950-71649969 None:intergenic 30.0%
CCACAAAAACTAAGGATTAT+TGG + Chr3:71650404-71650423 MsG0380015545.01.T01:intron 30.0%
CCATATATGGAAAAACAACT+AGG - Chr3:71650782-71650801 None:intergenic 30.0%
GAAGAATTCCAATAATCCAA+TGG - Chr3:71652000-71652019 None:intergenic 30.0%
GCTAGTGATATATCAAAGAA+AGG - Chr3:71647847-71647866 None:intergenic 30.0%
TAACTTCATAACCACTTGTT+TGG + Chr3:71648430-71648449 MsG0380015545.01.T01:intron 30.0%
TATCAAGCATATCCCATTTA+AGG + Chr3:71651131-71651150 MsG0380015545.01.T01:intron 30.0%
TATCAGTCCTTCTCAAAATA+TGG + Chr3:71649738-71649757 MsG0380015545.01.T01:intron 30.0%
TCTACTTGATTTACTGTCAT+TGG - Chr3:71651531-71651550 None:intergenic 30.0%
TTACTTCAAAGACTTGGAAT+AGG + Chr3:71651807-71651826 MsG0380015545.01.T01:CDS 30.0%
TTGGACCATAAGACAATTAA+AGG + Chr3:71648449-71648468 MsG0380015545.01.T01:intron 30.0%
TTTCAATGCCATTGGATTAT+TGG + Chr3:71651989-71652008 MsG0380015545.01.T01:CDS 30.0%
TTTGCTTAATTAACAAGGGT+GGG + Chr3:71650215-71650234 MsG0380015545.01.T01:intron 30.0%
TTTGTAAGACATTCTCAAAC+CGG + Chr3:71649668-71649687 MsG0380015545.01.T01:intron 30.0%
! AACACTCTTTTTGTGAAACA+AGG + Chr3:71651627-71651646 MsG0380015545.01.T01:CDS 30.0%
! AATTAAGGCACCTAAAAATG+AGG - Chr3:71649262-71649281 None:intergenic 30.0%
! ATTCAAGAGAATTTAGGATG+GGG + Chr3:71649303-71649322 MsG0380015545.01.T01:CDS 30.0%
! CTAACTTTGTGTCGATAAAT+TGG - Chr3:71649393-71649412 None:intergenic 30.0%
! CTTTTCTCCATCCAATTTTA+TGG - Chr3:71650053-71650072 None:intergenic 30.0%
! TCAGTGTTACTAACCATATT+AGG - Chr3:71651581-71651600 None:intergenic 30.0%
! TGTGACACATTTTCCATATA+TGG - Chr3:71650795-71650814 None:intergenic 30.0%
! TTGTCCCTATGAGTATATTT+TGG + Chr3:71651928-71651947 MsG0380015545.01.T01:CDS 30.0%
! TTTTTCCATCAATTCAAGGT+GGG - Chr3:71648851-71648870 None:intergenic 30.0%
!! CCAATAATCCTTAGTTTTTG+TGG - Chr3:71650407-71650426 None:intergenic 30.0%
!! CTTGTCAAGTGTTAATTTGT+TGG + Chr3:71652214-71652233 MsG0380015545.01.T01:CDS 30.0%
!! TGATAACCAATTCAGGTTTT+TGG + Chr3:71651455-71651474 MsG0380015545.01.T01:intron 30.0%
!! TGCTGGTTTATTATTGTCTT+TGG + Chr3:71649347-71649366 MsG0380015545.01.T01:CDS 30.0%
!! TGGATGTTTACCTCATTTTT+AGG + Chr3:71649249-71649268 MsG0380015545.01.T01:CDS 30.0%
!!! ACATTTTTTTAGAGGTACTG+CGG - Chr3:71650491-71650510 None:intergenic 30.0%
!!! CCTAGTTGTTTTTCCATATA+TGG + Chr3:71650779-71650798 MsG0380015545.01.T01:intron 30.0%
!!! TCTGAGTTTTAGTTGAGTAT+TGG + Chr3:71650942-71650961 MsG0380015545.01.T01:intron 30.0%
!!! TTTTTTCCATCAATTCAAGG+TGG - Chr3:71648852-71648871 None:intergenic 30.0%
AAAATGCCCCACAAAAACTA+AGG + Chr3:71650396-71650415 MsG0380015545.01.T01:intron 35.0%
AAAGAAGACTATACCCATGA+TGG + Chr3:71647938-71647957 MsG0380015545.01.T01:CDS 35.0%
AAGCCCTAAAGTTGCAATTA+AGG - Chr3:71649277-71649296 None:intergenic 35.0%
AAGTGTATAGTTACACGCAT+AGG + Chr3:71650875-71650894 MsG0380015545.01.T01:intron 35.0%
ACACGAATTATATCCTTAGC+AGG - Chr3:71649429-71649448 None:intergenic 35.0%
ACTGATAAGATAACAGGAAG+AGG + Chr3:71652119-71652138 MsG0380015545.01.T01:CDS 35.0%
ACTTTCTTCACAAGTGGAAT+TGG + Chr3:71652059-71652078 MsG0380015545.01.T01:CDS 35.0%
AGACATAAATGAGAGATGAG+AGG - Chr3:71648359-71648378 None:intergenic 35.0%
AGGAATGTTAATACATGGTC+AGG + Chr3:71648261-71648280 MsG0380015545.01.T01:CDS 35.0%
AGGCTTCTTTCTTTAATTGG+TGG + Chr3:71649229-71649248 MsG0380015545.01.T01:CDS 35.0%
AGTCCTTCTCAAAATATGGT+AGG + Chr3:71649742-71649761 MsG0380015545.01.T01:intron 35.0%
ATACACTTGGAATGCATATG+TGG - Chr3:71650863-71650882 None:intergenic 35.0%
ATCATGGGTATAGTCTTCTT+TGG - Chr3:71647939-71647958 None:intergenic 35.0%
ATGGAACATTGTGTTCTTAG+GGG + Chr3:71649519-71649538 MsG0380015545.01.T01:CDS 35.0%
ATTGTGTTCTTAGGGGAAAA+AGG + Chr3:71649526-71649545 MsG0380015545.01.T01:CDS 35.0%
CAAAACAACCAAGCCTTAAA+TGG - Chr3:71651147-71651166 None:intergenic 35.0%
CAAATTCCATTTGTGCATGT+TGG - Chr3:71649066-71649085 None:intergenic 35.0%
CAAGACGAGTAAAACCATAA+TGG - Chr3:71648576-71648595 None:intergenic 35.0%
CAAGGCCTTTAATTGTCTTA+TGG - Chr3:71648457-71648476 None:intergenic 35.0%
CACAAATGGAATTTGCAACA+AGG + Chr3:71649071-71649090 MsG0380015545.01.T01:CDS 35.0%
CTCATAGGGACAATATCTTT+AGG - Chr3:71651921-71651940 None:intergenic 35.0%
CTCATCTCTCATTTATGTCT+TGG + Chr3:71648359-71648378 MsG0380015545.01.T01:CDS 35.0%
CTGATAAGATAACAGGAAGA+GGG + Chr3:71652120-71652139 MsG0380015545.01.T01:CDS 35.0%
CTTCATGAAGTTGTGTTGTA+AGG - Chr3:71648224-71648243 None:intergenic 35.0%
CTTTGTCCAAAAACCTGAAT+TGG - Chr3:71651464-71651483 None:intergenic 35.0%
GAAACTCATGTAGATCTGAA+GGG - Chr3:71649497-71649516 None:intergenic 35.0%
GAAATCAACAGTTCCATCAT+GGG - Chr3:71647954-71647973 None:intergenic 35.0%
GACAATAATAAACCAGCAGT+AGG - Chr3:71649345-71649364 None:intergenic 35.0%
GACATAAATGAGAGATGAGA+GGG - Chr3:71648358-71648377 None:intergenic 35.0%
GCACCAAAAGTTGAGATATT+TGG - Chr3:71649168-71649187 None:intergenic 35.0%
GGAATGTTAATACATGGTCA+GGG + Chr3:71648262-71648281 MsG0380015545.01.T01:CDS 35.0%
GGGACTAAATTGATAGAAGA+TGG + Chr3:71649763-71649782 MsG0380015545.01.T01:intron 35.0%
GTCCTTCTCAAAATATGGTA+GGG + Chr3:71649743-71649762 MsG0380015545.01.T01:intron 35.0%
GTGCCTTAATTGCAACTTTA+GGG + Chr3:71649271-71649290 MsG0380015545.01.T01:CDS 35.0%
GTGTATATTCTCTACTTCAG+TGG - Chr3:71650518-71650537 None:intergenic 35.0%
GTTTGGATAACACCAATTCT+TGG + Chr3:71648288-71648307 MsG0380015545.01.T01:CDS 35.0%
TACATTGCAGATTCTTACCT+GGG + Chr3:71648315-71648334 MsG0380015545.01.T01:CDS 35.0%
TACTGCATAAGCAATTGCAA+TGG - Chr3:71651853-71651872 None:intergenic 35.0%
TAGTGACCAATCATTCAAGT+CGG - Chr3:71650750-71650769 None:intergenic 35.0%
TATAGTTACACGCATAGGAT+AGG + Chr3:71650880-71650899 MsG0380015545.01.T01:intron 35.0%
TATGCGTGTAACTATACACT+TGG - Chr3:71650876-71650895 None:intergenic 35.0%
TCCTCATGAGAAAGAGTTAA+AGG + Chr3:71649209-71649228 MsG0380015545.01.T01:CDS 35.0%
TGAAACTCATGTAGATCTGA+AGG - Chr3:71649498-71649517 None:intergenic 35.0%
TGAAGTAATGTGATTCCTCT+CGG - Chr3:71651795-71651814 None:intergenic 35.0%
TGAGTGCCTGTTTAAATTCA+CGG - Chr3:71649979-71649998 None:intergenic 35.0%
TGGGCCAAGACATTAAAAAT+GGG - Chr3:71650155-71650174 None:intergenic 35.0%
TTAACGCTGCTATGTTCTTA+AGG - Chr3:71648529-71648548 None:intergenic 35.0%
TTACATTGCAGATTCTTACC+TGG + Chr3:71648314-71648333 MsG0380015545.01.T01:CDS 35.0%
TTGAAACCAACATGCACAAA+TGG + Chr3:71649057-71649076 MsG0380015545.01.T01:CDS 35.0%
TTGCTTAATTAACAAGGGTG+GGG + Chr3:71650216-71650235 MsG0380015545.01.T01:intron 35.0%
TTTGTGGGGGTGATAAATAA+TGG + Chr3:71650015-71650034 MsG0380015545.01.T01:intron 35.0%
! AACTTGCATCGTTCTTCTTT+TGG - Chr3:71650710-71650729 None:intergenic 35.0%
! CTTTTGGTAGATAGACGAAA+TGG - Chr3:71650694-71650713 None:intergenic 35.0%
! GTATGAAGCATTTGAAAGGA+TGG + Chr3:71648164-71648183 MsG0380015545.01.T01:CDS 35.0%
! TTTGGGACCATAAAATTGGA+TGG + Chr3:71650043-71650062 MsG0380015545.01.T01:intron 35.0%
!! AGAAGCACTTTGTGTTCAAA+TGG + Chr3:71652292-71652311 MsG0380015545.01.T01:CDS 35.0%
!! CTTTGGTTACCTCATTTTTG+TGG + Chr3:71648893-71648912 MsG0380015545.01.T01:intron 35.0%
!!! GGATTTTAAAATCAGGACCA+AGG - Chr3:71651671-71651690 None:intergenic 35.0%
!!! GTGGCTACACATTTTTTTAG+AGG - Chr3:71650499-71650518 None:intergenic 35.0%
ACACTTGCTTACCTCAAAGT+TGG - Chr3:71649567-71649586 None:intergenic 40.0%
ACGAAAAACCGGTCATACAT+TGG - Chr3:71651744-71651763 None:intergenic 40.0%
ACTACCTTAGACAGAAACCT+TGG + Chr3:71651651-71651670 MsG0380015545.01.T01:CDS 40.0%
ATCACTGTGCCACAAAAATG+AGG - Chr3:71648905-71648924 None:intergenic 40.0%
ATCCAAAACTGGGAAATGGA+AGG + Chr3:71647994-71648013 MsG0380015545.01.T01:CDS 40.0%
CAATTGCAATGGCTATGATC+TGG - Chr3:71651842-71651861 None:intergenic 40.0%
CTACACAGCACTTTACACAA+TGG + Chr3:71649119-71649138 MsG0380015545.01.T01:CDS 40.0%
CTATGGAGTTGCATCAAACT+TGG + Chr3:71648191-71648210 MsG0380015545.01.T01:CDS 40.0%
CTTGTCTTTGGCATGCAAAA+TGG - Chr3:71650828-71650847 None:intergenic 40.0%
GAAGTAATGTGATTCCTCTC+GGG - Chr3:71651794-71651813 None:intergenic 40.0%
GACATCTAAAAGTCCTGCTA+AGG + Chr3:71649413-71649432 MsG0380015545.01.T01:CDS 40.0%
GCAATGTAAGCACCAAGAAT+TGG - Chr3:71648303-71648322 None:intergenic 40.0%
GCACTTTACACAATGGCAAT+TGG + Chr3:71649126-71649145 MsG0380015545.01.T01:CDS 40.0%
GCACTTTGTGTTCAAATGGA+AGG + Chr3:71652296-71652315 MsG0380015545.01.T01:CDS 40.0%
GCCTTTAACTCTTTCTCATG+AGG - Chr3:71649213-71649232 None:intergenic 40.0%
GGAAATCAACAGTTCCATCA+TGG - Chr3:71647955-71647974 None:intergenic 40.0%
GGAACAACTTTCTTCACAAG+TGG + Chr3:71652053-71652072 MsG0380015545.01.T01:CDS 40.0%
GGCCAAGACATTAAAAATGG+GGG - Chr3:71650153-71650172 None:intergenic 40.0%
GGGCCAAGACATTAAAAATG+GGG - Chr3:71650154-71650173 None:intergenic 40.0%
GGTGCCTTAATTGCAACTTT+AGG + Chr3:71649270-71649289 MsG0380015545.01.T01:CDS 40.0%
GTAGAGTTTGCGTTCCATTA+TGG + Chr3:71648559-71648578 MsG0380015545.01.T01:intron 40.0%
GTGGACAAATTAGCTCCAAT+TGG - Chr3:71648720-71648739 None:intergenic 40.0%
GTGGGCCAAGACATTAAAAA+TGG - Chr3:71650156-71650175 None:intergenic 40.0%
GTTTGATGCAACTCCATAGA+AGG - Chr3:71648190-71648209 None:intergenic 40.0%
TAAACAGGCACTCATTCTAG+TGG + Chr3:71649985-71650004 MsG0380015545.01.T01:intron 40.0%
TAATTCCTCTACACGTCACA+GGG + Chr3:71648997-71649016 MsG0380015545.01.T01:intron 40.0%
TCAACTTTGGATGCATCTCT+TGG + Chr3:71652323-71652342 MsG0380015545.01.T01:CDS 40.0%
TCCTTGGTATGCTCCTAATA+TGG + Chr3:71651565-71651584 MsG0380015545.01.T01:CDS 40.0%
TCTATCACACTCCAACTTTG+AGG + Chr3:71649553-71649572 MsG0380015545.01.T01:CDS 40.0%
TCTTGGCTTACAAGTATGAG+AGG + Chr3:71652340-71652359 MsG0380015545.01.T01:exon 40.0%
TGTAGATCTGAAGGGTTACT+AGG - Chr3:71649489-71649508 None:intergenic 40.0%
TGTCTTATGGTCCAAACAAG+TGG - Chr3:71648444-71648463 None:intergenic 40.0%
TTAATTCCTCTACACGTCAC+AGG + Chr3:71648996-71649015 MsG0380015545.01.T01:intron 40.0%
TTCACAAGTGGAATTGGTGT+TGG + Chr3:71652065-71652084 MsG0380015545.01.T01:CDS 40.0%
TTCCATCCAAAACTGGGAAA+TGG + Chr3:71647990-71648009 MsG0380015545.01.T01:CDS 40.0%
TTTGAAAGGATGGCCTTCTA+TGG + Chr3:71648174-71648193 MsG0380015545.01.T01:CDS 40.0%
TTTGTCCCACCTTGAATTGA+TGG + Chr3:71648843-71648862 MsG0380015545.01.T01:intron 40.0%
! AAGGCTTGTGCTTTTCTTGT+TGG + Chr3:71648013-71648032 MsG0380015545.01.T01:CDS 40.0%
! ACCATATTAGGAGCATACCA+AGG - Chr3:71651569-71651588 None:intergenic 40.0%
! ACTGATTCCAAGCACCATTT+GGG + Chr3:71651596-71651615 MsG0380015545.01.T01:CDS 40.0%
! AGCATATCCCATTTAAGGCT+TGG + Chr3:71651136-71651155 MsG0380015545.01.T01:intron 40.0%
! CAAGTTGTTTCCTCCATATG+AGG + Chr3:71650724-71650743 MsG0380015545.01.T01:intron 40.0%
! CAGGGTATGAAGCATTTGAA+AGG + Chr3:71648160-71648179 MsG0380015545.01.T01:intron 40.0%
! GCAGATGTTTTCAATGCCAT+TGG + Chr3:71651981-71652000 MsG0380015545.01.T01:CDS 40.0%
! TCACAAGTGGAATTGGTGTT+GGG + Chr3:71652066-71652085 MsG0380015545.01.T01:CDS 40.0%
!! AGTGTTGATTTGTGCCCAAA+TGG - Chr3:71651613-71651632 None:intergenic 40.0%
!! GATGGAACTGTTGATTTCCA+CGG + Chr3:71647956-71647975 MsG0380015545.01.T01:CDS 40.0%
!! GTCCCCCATTTTTAATGTCT+TGG + Chr3:71650148-71650167 MsG0380015545.01.T01:intron 40.0%
!! GTCCCTACCATATTTTGAGA+AGG - Chr3:71649748-71649767 None:intergenic 40.0%
!! TAAGTTAAGTTGACTGCCTG+TGG - Chr3:71650178-71650197 None:intergenic 40.0%
!!! GCTGCTGGGATTTTAAAATC+AGG - Chr3:71651678-71651697 None:intergenic 40.0%
!!! TTCCATTTCCCAGTTTTGGA+TGG - Chr3:71647995-71648014 None:intergenic 40.0%
AAAATCCCAGCAGCATCTCT+AGG + Chr3:71651684-71651703 MsG0380015545.01.T01:CDS 45.0%
AATGGGGGACACGTAATCTT+AGG - Chr3:71650138-71650157 None:intergenic 45.0%
AGGACCAAGGTTTCTGTCTA+AGG - Chr3:71651658-71651677 None:intergenic 45.0%
ATACATGGTCAGGGTCTGTT+TGG + Chr3:71648271-71648290 MsG0380015545.01.T01:CDS 45.0%
ATTTGTGCCCAAATGGTGCT+TGG - Chr3:71651606-71651625 None:intergenic 45.0%
CCAAGACTTTGCATGTCTTC+AGG - Chr3:71652035-71652054 None:intergenic 45.0%
CCTGAAGACATGCAAAGTCT+TGG + Chr3:71652032-71652051 MsG0380015545.01.T01:CDS 45.0%
CTGCTGTTCCATCCAAAACT+GGG + Chr3:71647984-71648003 MsG0380015545.01.T01:CDS 45.0%
CTTCTTGAGGAACCAGTTGT+AGG - Chr3:71651504-71651523 None:intergenic 45.0%
GAAGAGGGACTAGAAAGAGT+TGG + Chr3:71652135-71652154 MsG0380015545.01.T01:CDS 45.0%
GAAGGAGCAAAGCTAATCCT+TGG + Chr3:71651549-71651568 MsG0380015545.01.T01:CDS 45.0%
GCATGAACGGTACGAAAAAC+CGG - Chr3:71651755-71651774 None:intergenic 45.0%
GGACACGTAATCTTAGGACA+CGG - Chr3:71650132-71650151 None:intergenic 45.0%
GGATATGGTATTCCTACTGC+TGG + Chr3:71649330-71649349 MsG0380015545.01.T01:CDS 45.0%
GTCTTTGGCATGCAAAATGG+TGG - Chr3:71650825-71650844 None:intergenic 45.0%
TACACAATGGCAATTGGTGC+AGG + Chr3:71649132-71649151 MsG0380015545.01.T01:CDS 45.0%
TATCCCACGAGTGCAATTTG+TGG - Chr3:71648739-71648758 None:intergenic 45.0%
TCATTCAAGTCGGCCTCATA+TGG - Chr3:71650740-71650759 None:intergenic 45.0%
TCTCAGTGCCAATGTATGAC+CGG + Chr3:71651733-71651752 MsG0380015545.01.T01:CDS 45.0%
TGTCCACAAATTGCACTCGT+GGG + Chr3:71648733-71648752 MsG0380015545.01.T01:intron 45.0%
TTAGGATGGGGACTTGGATA+TGG + Chr3:71649315-71649334 MsG0380015545.01.T01:CDS 45.0%
TTGTCCACAAATTGCACTCG+TGG + Chr3:71648732-71648751 MsG0380015545.01.T01:intron 45.0%
! AGCCTTCCATTTCCCAGTTT+TGG - Chr3:71647999-71648018 None:intergenic 45.0%
! GAGAATTTAGGATGGGGACT+TGG + Chr3:71649309-71649328 MsG0380015545.01.T01:CDS 45.0%
! TAACAAGGGTGGGGTATCAA+GGG + Chr3:71650225-71650244 MsG0380015545.01.T01:intron 45.0%
! TGTCATTGGTGCTCTTCTTG+AGG - Chr3:71651517-71651536 None:intergenic 45.0%
! TTAACAAGGGTGGGGTATCA+AGG + Chr3:71650224-71650243 MsG0380015545.01.T01:intron 45.0%
!! ATGAGGCCGACTTGAATGAT+TGG + Chr3:71650741-71650760 MsG0380015545.01.T01:intron 45.0%
!! CACTGATTCCAAGCACCATT+TGG + Chr3:71651595-71651614 MsG0380015545.01.T01:CDS 45.0%
!! TCTAGTGGTAGTGGCTTTGT+GGG + Chr3:71650000-71650019 MsG0380015545.01.T01:intron 45.0%
!! TTAAGTTGACTGCCTGTGGT+GGG - Chr3:71650174-71650193 None:intergenic 45.0%
!! TTCTAGTGGTAGTGGCTTTG+TGG + Chr3:71649999-71650018 MsG0380015545.01.T01:intron 45.0%
!! AATAAAAAAAAAAAAAGATT+TGG + Chr3:71652457-71652476 MsG0380015545.01.T01:three_prime_UTR 5.0%
!! TAATTAATTGTTTATATTAT+GGG + Chr3:71648088-71648107 MsG0380015545.01.T01:intron 5.0%
!! TTAATTAATTGTTTATATTA+TGG + Chr3:71648087-71648106 MsG0380015545.01.T01:intron 5.0%
!!! AATCTTTTTTTTTTTTTATT+TGG - Chr3:71652457-71652476 None:intergenic 5.0%
ACAATGGCAATTGGTGCAGG+TGG + Chr3:71649135-71649154 MsG0380015545.01.T01:CDS 50.0%
ATTCTTACCTGGGTCGCTTC+TGG + Chr3:71648325-71648344 MsG0380015545.01.T01:CDS 50.0%
CACTGAGAGCAGCATGGATA+GGG - Chr3:71651721-71651740 None:intergenic 50.0%
CCTGCTGTTCCATCCAAAAC+TGG + Chr3:71647983-71648002 MsG0380015545.01.T01:CDS 50.0%
GATAGATGTAACGGTCCCCA+TGG - Chr3:71652404-71652423 None:intergenic 50.0%
GATCCCCTACAATCGTTGCA+CGG + Chr3:71652371-71652390 MsG0380015545.01.T01:three_prime_UTR 50.0%
GGCACTCATTCTAGTGGTAG+TGG + Chr3:71649991-71650010 MsG0380015545.01.T01:intron 50.0%
GTAATGTGATTCCTCTCGGG+TGG - Chr3:71651791-71651810 None:intergenic 50.0%
TCATTCCCTGTGACGTGTAG+AGG - Chr3:71649005-71649024 None:intergenic 50.0%
TTAATGTCTTGGCCCACCAC+AGG + Chr3:71650159-71650178 MsG0380015545.01.T01:intron 50.0%
TTCAAGTCGGCCTCATATGG+AGG - Chr3:71650737-71650756 None:intergenic 50.0%
!! CTAGTGGTAGTGGCTTTGTG+GGG + Chr3:71650001-71650020 MsG0380015545.01.T01:intron 50.0%
!! GTTAAGTTGACTGCCTGTGG+TGG - Chr3:71650175-71650194 None:intergenic 50.0%
!! TAGTGGTAGTGGCTTTGTGG+GGG + Chr3:71650002-71650021 MsG0380015545.01.T01:intron 50.0%
!!! CCAGTTTTGGATGGAACAGC+AGG - Chr3:71647986-71648005 None:intergenic 50.0%
AAGCTGCCTAGAGATGCTGC+TGG - Chr3:71651693-71651712 None:intergenic 55.0%
AGCTGCCTAGAGATGCTGCT+GGG - Chr3:71651692-71651711 None:intergenic 55.0%
ATGGAACAGCAGGTTTGCCG+TGG - Chr3:71647976-71647995 None:intergenic 55.0%
CCGTTCATGCGCCAGAAAAC+CGG + Chr3:71651765-71651784 MsG0380015545.01.T01:CDS 55.0%
GCACTGAGAGCAGCATGGAT+AGG - Chr3:71651722-71651741 None:intergenic 55.0%
TGAAAGTCCAGAAGCGACCC+AGG - Chr3:71648335-71648354 None:intergenic 55.0%
TGCGCCGTGCAACGATTGTA+GGG - Chr3:71652378-71652397 None:intergenic 55.0%
! CATTGGCACTGAGAGCAGCA+TGG - Chr3:71651727-71651746 None:intergenic 55.0%
!! CCGGTTTTCTGGCGCATGAA+CGG - Chr3:71651768-71651787 None:intergenic 55.0%
CTGCGCCGTGCAACGATTGT+AGG - Chr3:71652379-71652398 None:intergenic 60.0%
GCGCCGTGCAACGATTGTAG+GGG - Chr3:71652377-71652396 None:intergenic 60.0%
TGTGATTCCTCTCGGGTGGC+CGG - Chr3:71651787-71651806 None:intergenic 60.0%
! CAAGGGTGGGGTATCAAGGG+TGG + Chr3:71650228-71650247 MsG0380015545.01.T01:intron 60.0%
CAGAAAACCGGCCACCCGAG+AGG + Chr3:71651777-71651796 MsG0380015545.01.T01:CDS 65.0%
GTTGCACGGCGCAGTGCCAT+GGG + Chr3:71652385-71652404 MsG0380015545.01.T01:three_prime_UTR 65.0%
TTGCACGGCGCAGTGCCATG+GGG + Chr3:71652386-71652405 MsG0380015545.01.T01:three_prime_UTR 65.0%
!! CTCTCGGGTGGCCGGTTTTC+TGG - Chr3:71651779-71651798 None:intergenic 65.0%
CGTTGCACGGCGCAGTGCCA+TGG + Chr3:71652384-71652403 MsG0380015545.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 71647831 71652614 71647831 ID=MsG0380015545.01;Name=MsG0380015545.01
Chr3 mRNA 71647831 71652614 71647831 ID=MsG0380015545.01.T01;Parent=MsG0380015545.01;Name=MsG0380015545.01.T01;_AED=0.29;_eAED=0.29;_QI=98|1|1|1|1|1|4|256|589
Chr3 exon 71647831 71648034 71647831 ID=MsG0380015545.01.T01:exon:23822;Parent=MsG0380015545.01.T01
Chr3 exon 71648163 71648380 71648163 ID=MsG0380015545.01.T01:exon:23823;Parent=MsG0380015545.01.T01
Chr3 exon 71649018 71649574 71649018 ID=MsG0380015545.01.T01:exon:23824;Parent=MsG0380015545.01.T01
Chr3 exon 71651470 71652614 71651470 ID=MsG0380015545.01.T01:exon:23825;Parent=MsG0380015545.01.T01
Chr3 five_prime_UTR 71647831 71647928 71647831 ID=MsG0380015545.01.T01:five_prime_utr;Parent=MsG0380015545.01.T01
Chr3 CDS 71647929 71648034 71647929 ID=MsG0380015545.01.T01:cds;Parent=MsG0380015545.01.T01
Chr3 CDS 71648163 71648380 71648163 ID=MsG0380015545.01.T01:cds;Parent=MsG0380015545.01.T01
Chr3 CDS 71649018 71649574 71649018 ID=MsG0380015545.01.T01:cds;Parent=MsG0380015545.01.T01
Chr3 CDS 71651470 71652358 71651470 ID=MsG0380015545.01.T01:cds;Parent=MsG0380015545.01.T01
Chr3 three_prime_UTR 71652359 71652614 71652359 ID=MsG0380015545.01.T01:three_prime_utr;Parent=MsG0380015545.01.T01
Gene Sequence

>MsG0380015545.01.T01

ATGGAAGCCAAAGAAGACTATACCCATGATGGAACTGTTGATTTCCACGGCAAACCTGCTGTTCCATCCAAAACTGGGAAATGGAAGGCTTGTGCTTTTCTTGTTGGGTATGAAGCATTTGAAAGGATGGCCTTCTATGGAGTTGCATCAAACTTGGTGAATTACCTTACAACACAACTTCATGAAGATACTGTTTCATCAGTTAGGAATGTTAATACATGGTCAGGGTCTGTTTGGATAACACCAATTCTTGGTGCTTACATTGCAGATTCTTACCTGGGTCGCTTCTGGACTTTCACCCTCTCATCTCTCATTTATGTCTTGGGAATGACACTTCTTACTATAGCTGTATCACTCAAGAGCTTGAAACCAACATGCACAAATGGAATTTGCAACAAGGCTTCAACATCACAAATTACATTTTTCTACACAGCACTTTACACAATGGCAATTGGTGCAGGTGGAACAAAACCAAATATCTCAACTTTTGGTGCTGACCAATTTGATGATTTTAATCCTCATGAGAAAGAGTTAAAGGCTTCTTTCTTTAATTGGTGGATGTTTACCTCATTTTTAGGTGCCTTAATTGCAACTTTAGGGCTTGTATATATTCAAGAGAATTTAGGATGGGGACTTGGATATGGTATTCCTACTGCTGGTTTATTATTGTCTTTGGTTATTTTCTATATTGGGACACCAATTTATCGACACAAAGTTAGGACATCTAAAAGTCCTGCTAAGGATATAATTCGTGTCTTTATTGTTGCCTTCAAGAATAGAAAACTTCAACTTCCTAGTAACCCTTCAGATCTACATGAGTTTCAAATGGAACATTGTGTTCTTAGGGGAAAAAGGCAAGTCTATCACACTCCAACTTTGAGGTTTTTGGACAAAGCTGCTATTAAAGAAGATCCTACAACTGGTTCCTCAAGAAGAGCACCAATGACAGTAAATCAAGTAGAAGGAGCAAAGCTAATCCTTGGTATGCTCCTAATATGGTTAGTAACACTGATTCCAAGCACCATTTGGGCACAAATCAACACTCTTTTTGTGAAACAAGGCACTACCTTAGACAGAAACCTTGGTCCTGATTTTAAAATCCCAGCAGCATCTCTAGGCAGCTTTGTAACCCTATCCATGCTGCTCTCAGTGCCAATGTATGACCGGTTTTTCGTACCGTTCATGCGCCAGAAAACCGGCCACCCGAGAGGAATCACATTACTTCAAAGACTTGGAATAGGATTTTCAATCCAGATCATAGCCATTGCAATTGCTTATGCAGTAGAAGTTAGAAGAATGCATGTGATAAAAGAGAATCACATTTTTGGTCCTAAAGATATTGTCCCTATGAGTATATTTTGGTTGTTACCACAATATGTTCTTATTGGTATAGCAGATGTTTTCAATGCCATTGGATTATTGGAATTCTTCTATGATCAATCTCCTGAAGACATGCAAAGTCTTGGAACAACTTTCTTCACAAGTGGAATTGGTGTTGGGAATTTCTTGAACAGTTTTTTGGTAACAATGACTGATAAGATAACAGGAAGAGGGACTAGAAAGAGTTGGATTGCTGATAACTTGAATGATTCTCACTTAGATTACTATTATGGGTTTCTTTTGATCTTGTCAAGTGTTAATTTGTTGGTGTTTTTGTGGGTTTCAAGTAGATACATTTACAAGAAGGAGTCAACAAGAATCAAAGAAGCACTTTGTGTTCAAATGGAAGGTAATTCAACTTTGGATGCATCTCTTGGCTTACAAGTATGA

Protein sequence

>MsG0380015545.01.T01

MEAKEDYTHDGTVDFHGKPAVPSKTGKWKACAFLVGYEAFERMAFYGVASNLVNYLTTQLHEDTVSSVRNVNTWSGSVWITPILGAYIADSYLGRFWTFTLSSLIYVLGMTLLTIAVSLKSLKPTCTNGICNKASTSQITFFYTALYTMAIGAGGTKPNISTFGADQFDDFNPHEKELKASFFNWWMFTSFLGALIATLGLVYIQENLGWGLGYGIPTAGLLLSLVIFYIGTPIYRHKVRTSKSPAKDIIRVFIVAFKNRKLQLPSNPSDLHEFQMEHCVLRGKRQVYHTPTLRFLDKAAIKEDPTTGSSRRAPMTVNQVEGAKLILGMLLIWLVTLIPSTIWAQINTLFVKQGTTLDRNLGPDFKIPAASLGSFVTLSMLLSVPMYDRFFVPFMRQKTGHPRGITLLQRLGIGFSIQIIAIAIAYAVEVRRMHVIKENHIFGPKDIVPMSIFWLLPQYVLIGIADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTMTDKITGRGTRKSWIADNLNDSHLDYYYGFLLILSSVNLLVFLWVSSRYIYKKESTRIKEALCVQMEGNSTLDASLGLQV*