AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010198.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010198.01.T01 MTR_2g085210 92.694 876 13 3 1 826 1 875 0.0 1626
MsG0280010198.01.T01 MTR_2g085210 91.679 697 49 4 1 689 1 696 0.0 1264
MsG0280010198.01.T01 MTR_2g085210 91.679 697 49 4 1 689 1 696 0.0 1264
MsG0280010198.01.T01 MTR_5g009530 37.229 830 369 19 77 826 277 1034 2.60e-152 473
MsG0280010198.01.T01 MTR_8g027985 36.077 826 395 17 77 826 196 964 5.30e-149 462
MsG0280010198.01.T01 MTR_5g009530 35.325 770 347 18 77 767 277 974 6.52e-124 397
MsG0280010198.01.T01 MTR_5g085250 32.624 564 268 9 335 823 10 536 4.35e-90 295
MsG0280010198.01.T01 MTR_5g085250 32.624 564 268 9 335 823 43 569 3.68e-89 293
MsG0280010198.01.T01 MTR_5g085250 32.451 567 271 9 335 826 147 676 8.80e-88 293
MsG0280010198.01.T01 MTR_5g009530 32.660 594 296 15 77 640 277 796 2.50e-76 265
MsG0280010198.01.T02 MTR_2g085210 92.694 876 13 3 1 826 1 875 0.0 1626
MsG0280010198.01.T02 MTR_2g085210 91.679 697 49 4 1 689 1 696 0.0 1264
MsG0280010198.01.T02 MTR_2g085210 91.679 697 49 4 1 689 1 696 0.0 1264
MsG0280010198.01.T02 MTR_5g009530 37.229 830 369 19 77 826 277 1034 2.60e-152 473
MsG0280010198.01.T02 MTR_8g027985 36.077 826 395 17 77 826 196 964 5.30e-149 462
MsG0280010198.01.T02 MTR_5g009530 35.325 770 347 18 77 767 277 974 6.52e-124 397
MsG0280010198.01.T02 MTR_5g085250 32.624 564 268 9 335 823 10 536 4.35e-90 295
MsG0280010198.01.T02 MTR_5g085250 32.624 564 268 9 335 823 43 569 3.68e-89 293
MsG0280010198.01.T02 MTR_5g085250 32.451 567 271 9 335 826 147 676 8.80e-88 293
MsG0280010198.01.T02 MTR_5g009530 32.660 594 296 15 77 640 277 796 2.50e-76 265
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010198.01.T01 AT3G15354 58.229 881 268 15 1 826 1 836 0.0 972
MsG0280010198.01.T01 AT3G15354 57.705 889 268 15 1 826 1 844 0.0 969
MsG0280010198.01.T01 AT1G53090 55.393 890 237 19 1 826 1 794 0.0 872
MsG0280010198.01.T01 AT1G53090 55.393 890 237 19 1 826 1 794 0.0 872
MsG0280010198.01.T01 AT1G53090 55.393 890 237 19 1 826 1 794 0.0 872
MsG0280010198.01.T01 AT3G15354 60.601 599 169 9 290 826 1 594 0.0 713
MsG0280010198.01.T01 AT3G15354 60.601 599 169 9 290 826 1 594 0.0 713
MsG0280010198.01.T01 AT3G15354 56.575 654 225 14 1 640 1 609 0.0 677
MsG0280010198.01.T01 AT1G53090 59.030 598 159 9 290 826 1 573 0.0 659
MsG0280010198.01.T01 AT1G53090 53.858 648 189 17 7 640 8 559 0.0 583
MsG0280010198.01.T01 AT2G46340 36.996 819 383 17 77 826 275 1029 3.64e-152 473
MsG0280010198.01.T01 AT2G46340 36.996 819 383 17 77 826 275 1029 3.64e-152 473
MsG0280010198.01.T01 AT4G11110 35.105 809 393 16 77 826 301 1036 9.87e-148 461
MsG0280010198.01.T01 AT2G32950 31.408 554 277 9 343 823 35 558 2.33e-85 283
MsG0280010198.01.T01 AT2G32950 31.408 554 277 9 343 823 148 671 5.56e-84 282
MsG0280010198.01.T01 AT5G52250 30.745 322 150 10 564 823 70 380 9.03e-32 128
MsG0280010198.01.T01 AT5G23730 40.526 190 92 8 643 822 183 361 3.74e-30 123
MsG0280010198.01.T02 AT3G15354 58.229 881 268 15 1 826 1 836 0.0 972
MsG0280010198.01.T02 AT3G15354 57.705 889 268 15 1 826 1 844 0.0 969
MsG0280010198.01.T02 AT1G53090 55.393 890 237 19 1 826 1 794 0.0 872
MsG0280010198.01.T02 AT1G53090 55.393 890 237 19 1 826 1 794 0.0 872
MsG0280010198.01.T02 AT1G53090 55.393 890 237 19 1 826 1 794 0.0 872
MsG0280010198.01.T02 AT3G15354 60.601 599 169 9 290 826 1 594 0.0 713
MsG0280010198.01.T02 AT3G15354 60.601 599 169 9 290 826 1 594 0.0 713
MsG0280010198.01.T02 AT3G15354 56.575 654 225 14 1 640 1 609 0.0 677
MsG0280010198.01.T02 AT1G53090 59.030 598 159 9 290 826 1 573 0.0 659
MsG0280010198.01.T02 AT1G53090 53.858 648 189 17 7 640 8 559 0.0 583
MsG0280010198.01.T02 AT2G46340 36.996 819 383 17 77 826 275 1029 3.64e-152 473
MsG0280010198.01.T02 AT2G46340 36.996 819 383 17 77 826 275 1029 3.64e-152 473
MsG0280010198.01.T02 AT4G11110 35.105 809 393 16 77 826 301 1036 9.87e-148 461
MsG0280010198.01.T02 AT2G32950 31.408 554 277 9 343 823 35 558 2.33e-85 283
MsG0280010198.01.T02 AT2G32950 31.408 554 277 9 343 823 148 671 5.56e-84 282
MsG0280010198.01.T02 AT5G52250 30.745 322 150 10 564 823 70 380 9.03e-32 128
MsG0280010198.01.T02 AT5G23730 40.526 190 92 8 643 822 183 361 3.74e-30 123

Find 12 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGCAAATTCTTATCAATT+TGG 0.218331 2:-66097343 MsG0280010198.01.T01:five_prime_UTR
TGTACCAATGTCACCATAAA+AGG 0.266806 2:+66097469 None:intergenic
GGATAAACTTTAGTCCTTTG+TGG 0.430838 2:-66097322 MsG0280010198.01.T01:five_prime_UTR
GTATTGAGTTTGGCCTAAGC+AGG 0.459125 2:-66097502 None:intergenic
AGTTTGGCCTAAGCAGGAAC+AGG 0.467765 2:-66097496 None:intergenic
ATCATCAAAGTTAATAAATG+AGG 0.532046 2:+66097374 None:intergenic
AGGATCTCCTGTTCCTGCTT+AGG 0.540648 2:+66097489 None:intergenic
ACTTTGATGATGTGTGGTGG+TGG 0.585646 2:-66097362 MsG0280010198.01.T01:five_prime_UTR
TTAACTTTGATGATGTGTGG+TGG 0.612056 2:-66097365 MsG0280010198.01.T01:five_prime_UTR
TTATTAACTTTGATGATGTG+TGG 0.613791 2:-66097368 MsG0280010198.01.T01:five_prime_UTR
TAAACTTTAGTCCTTTGTGG+AGG 0.621830 2:-66097319 MsG0280010198.01.T01:intron
AAAACACATAACCTCCACAA+AGG 0.680691 2:+66097308 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAAATAAAAAAAACAATAA+AGG + Chr2:66092650-66092669 None:intergenic 10.0%
!! TTATTATTATTAGATTATAG+CGG - Chr2:66097312-66097331 MsG0280010198.01.T01:intron 10.0%
!!! CTTTATTGTTTTTTTTATTT+AGG - Chr2:66092648-66092667 MsG0280010198.01.T01:intron 10.0%
!!! TGATTATTTTGTTTAAAAAA+AGG - Chr2:66096922-66096941 MsG0280010198.01.T01:five_prime_UTR 10.0%
!! AAGAAAATAAAATGAAAGAT+AGG - Chr2:66093577-66093596 MsG0280010198.01.T01:intron 15.0%
!! ATATGAAGTTTATTATGATT+AGG + Chr2:66094629-66094648 None:intergenic 15.0%
!! ATTCAATTGTTATATATAGA+GGG - Chr2:66097235-66097254 MsG0280010198.01.T01:intron 15.0%
!! TATTCAATTGTTATATATAG+AGG - Chr2:66097234-66097253 MsG0280010198.01.T01:intron 15.0%
!!! ATTGTTACTTCAAAATAAAT+TGG + Chr2:66096839-66096858 None:intergenic 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG - Chr2:66094477-66094496 MsG0280010198.01.T01:CDS 15.0%
!!! TTTTGTATATATATTAATGC+TGG - Chr2:66096232-66096251 MsG0280010198.01.T01:CDS 15.0%
!! AAAATAAAATGAAAGATAGG+AGG - Chr2:66093580-66093599 MsG0280010198.01.T01:intron 20.0%
!! ATATCAAGTATCCATTTAAA+AGG - Chr2:66094309-66094328 MsG0280010198.01.T01:CDS 20.0%
!! ATCATCAAAGTTAATAAATG+AGG + Chr2:66092442-66092461 None:intergenic 20.0%
!! TAACTTTATTATAACACATG+TGG - Chr2:66096627-66096646 MsG0280010198.01.T01:CDS 20.0%
!! TTCAATTGTTATATATAGAG+GGG - Chr2:66097236-66097255 MsG0280010198.01.T01:intron 20.0%
!!! AAGAAAACAATCCTTTTAAA+TGG + Chr2:66094323-66094342 None:intergenic 20.0%
!!! ATATTTTAAGTGGATAAAGA+TGG - Chr2:66092912-66092931 MsG0280010198.01.T01:intron 20.0%
!!! GTTTATTTTCTTGTTTATCA+GGG - Chr2:66094726-66094745 MsG0280010198.01.T01:CDS 20.0%
!!! TCTTGATATTGATTTTTTGT+TGG - Chr2:66092767-66092786 MsG0280010198.01.T01:CDS 20.0%
!!! TGAATAAAGTTTTTGAATTC+AGG - Chr2:66092690-66092709 MsG0280010198.01.T01:CDS 20.0%
!!! TTCTTTGTTTAAGTAATGAA+AGG + Chr2:66094861-66094880 None:intergenic 20.0%
!!! TTTTTTTATTTGAGCTTTGT+TGG - Chr2:66093824-66093843 MsG0280010198.01.T01:intron 20.0%
! AAACATTCAAAGACTTTGTT+TGG + Chr2:66094046-66094065 None:intergenic 25.0%
! AGAAACCAAAAATTTGTCAA+TGG + Chr2:66095699-66095718 None:intergenic 25.0%
! ATAACTATAATGCATGTAGT+TGG - Chr2:66095719-66095738 MsG0280010198.01.T01:intron 25.0%
! ATGTGATACAATCATAAAAG+AGG - Chr2:66095542-66095561 MsG0280010198.01.T01:intron 25.0%
! CAAATTGCGTTTAAATACTA+TGG + Chr2:66095809-66095828 None:intergenic 25.0%
! CTGATTCAATAAACGATATA+TGG + Chr2:66093323-66093342 None:intergenic 25.0%
! GGACTGTGTAAAATTTAATA+TGG + Chr2:66097462-66097481 None:intergenic 25.0%
! GTAGATCATAGTAATATATC+TGG + Chr2:66096398-66096417 None:intergenic 25.0%
! TATATTTCATTTCGATACTC+TGG - Chr2:66093790-66093809 MsG0280010198.01.T01:intron 25.0%
! TTGTTATCTTATTCAGCTAT+GGG - Chr2:66096001-66096020 MsG0280010198.01.T01:intron 25.0%
! TTTAGTTGGACATAATAAGA+CGG - Chr2:66096443-66096462 MsG0280010198.01.T01:CDS 25.0%
! TTTCAGTAAGCTTAAAGTTA+AGG - Chr2:66095401-66095420 MsG0280010198.01.T01:intron 25.0%
!! AAATGCCATTGACAAATTTT+TGG - Chr2:66095691-66095710 MsG0280010198.01.T01:CDS 25.0%
!! ATTGCTTCAAGTAATTTTGA+AGG - Chr2:66095651-66095670 MsG0280010198.01.T01:CDS 25.0%
!!! AAATGAGTTTTGTGTTAACA+AGG - Chr2:66092808-66092827 MsG0280010198.01.T01:CDS 25.0%
!!! ATTAGAAGTATCTGTTTCAT+CGG + Chr2:66093642-66093661 None:intergenic 25.0%
!!! ATTCTGAAACAAAAGAAACA+TGG + Chr2:66096723-66096742 None:intergenic 25.0%
!!! CGTTTATTTTCTTGTTTATC+AGG - Chr2:66094725-66094744 MsG0280010198.01.T01:CDS 25.0%
!!! CTACATGCAAATATTTTAAG+TGG - Chr2:66092902-66092921 MsG0280010198.01.T01:intron 25.0%
!!! CTTTTGTTTCAGAATTTTGT+GGG - Chr2:66096728-66096747 MsG0280010198.01.T01:CDS 25.0%
!!! GTTTGCTACAGATATATTTT+CGG + Chr2:66096884-66096903 None:intergenic 25.0%
!!! TCTTTTGTTTCAGAATTTTG+TGG - Chr2:66096727-66096746 MsG0280010198.01.T01:CDS 25.0%
!!! TTATTAACTTTGATGATGTG+TGG - Chr2:66092445-66092464 MsG0280010198.01.T01:three_prime_UTR 25.0%
!!! TTTAAATCTAGTTTGCTTCT+TGG + Chr2:66094950-66094969 None:intergenic 25.0%
AAATATCGTCTATGTGCATT+AGG - Chr2:66096963-66096982 MsG0280010198.01.T01:five_prime_UTR 30.0%
AAATGTTGGATAACGAAGTT+AGG + Chr2:66094096-66094115 None:intergenic 30.0%
AAGAAGTTGCATCAATAACT+TGG - Chr2:66095302-66095321 MsG0280010198.01.T01:intron 30.0%
ACAAGATTCTAGGTTTAGAA+AGG - Chr2:66093023-66093042 MsG0280010198.01.T01:intron 30.0%
ACTAGATTTAAAGAGATTGC+TGG - Chr2:66094958-66094977 MsG0280010198.01.T01:CDS 30.0%
ATATGAGCTTAATGAACAAC+TGG + Chr2:66094566-66094585 None:intergenic 30.0%
ATTCTAGGTTTAGAAAGGAA+AGG - Chr2:66093028-66093047 MsG0280010198.01.T01:intron 30.0%
ATTTATAGATTGCTGTGTAG+AGG + Chr2:66097182-66097201 None:intergenic 30.0%
CACACAAATAGTTTAATCTC+AGG + Chr2:66094413-66094432 None:intergenic 30.0%
CACATGGAAAAATGTAAAAG+AGG - Chr2:66097398-66097417 MsG0280010198.01.T01:five_prime_UTR 30.0%
CTGAGATTAAACTATTTGTG+TGG - Chr2:66094411-66094430 MsG0280010198.01.T01:CDS 30.0%
GAAAGCAAAAACAAAGAACT+GGG + Chr2:66094597-66094616 None:intergenic 30.0%
GATGAAACAGATACTTCTAA+TGG - Chr2:66093641-66093660 MsG0280010198.01.T01:intron 30.0%
GTGGCAAATTCTTATCAATT+TGG - Chr2:66092470-66092489 MsG0280010198.01.T01:three_prime_UTR 30.0%
TAAAATGAAAGATAGGAGGA+AGG - Chr2:66093584-66093603 MsG0280010198.01.T01:intron 30.0%
TAGACAAAAGATAGAAGATG+AGG - Chr2:66094819-66094838 MsG0280010198.01.T01:CDS 30.0%
TAGGCTACATTGAAACAAAA+TGG + Chr2:66094077-66094096 None:intergenic 30.0%
TATAGTTTGATGTGAATGAG+AGG - Chr2:66097208-66097227 MsG0280010198.01.T01:intron 30.0%
TATTGAATCAGCTTCTTGTT+CGG - Chr2:66093332-66093351 MsG0280010198.01.T01:CDS 30.0%
TGAAACTTGAATTGTAATGC+TGG + Chr2:66097018-66097037 None:intergenic 30.0%
TGAAAGCAAAAACAAAGAAC+TGG + Chr2:66094598-66094617 None:intergenic 30.0%
TGCATGAGTGTAAAACAATT+TGG - Chr2:66092843-66092862 MsG0280010198.01.T01:intron 30.0%
TGGCTATGAATCATAGTTTA+CGG - Chr2:66095739-66095758 MsG0280010198.01.T01:intron 30.0%
TTATGTTATGTACCTCGAAA+AGG + Chr2:66093749-66093768 None:intergenic 30.0%
TTCTAGGTTTAGAAAGGAAA+GGG - Chr2:66093029-66093048 MsG0280010198.01.T01:intron 30.0%
TTTCTTTGTCAGTACTTCAA+AGG - Chr2:66094531-66094550 MsG0280010198.01.T01:CDS 30.0%
! ACGTACTTCTGAGAATATTT+GGG - Chr2:66093850-66093869 MsG0280010198.01.T01:intron 30.0%
! CCAAATACTATCTGAAATGA+GGG - Chr2:66096037-66096056 MsG0280010198.01.T01:intron 30.0%
! CTCTTTTACATTTTTCCATG+TGG + Chr2:66097400-66097419 None:intergenic 30.0%
! CTTGTTATCTTATTCAGCTA+TGG - Chr2:66096000-66096019 MsG0280010198.01.T01:intron 30.0%
! GTTTTCAGCTTATTCTCATA+AGG - Chr2:66093911-66093930 MsG0280010198.01.T01:intron 30.0%
! TACGTACTTCTGAGAATATT+TGG - Chr2:66093849-66093868 MsG0280010198.01.T01:intron 30.0%
! TATTAGATTATAGCGGAAAC+AGG - Chr2:66097319-66097338 MsG0280010198.01.T01:intron 30.0%
! TGGAAGAGTTTTCTATTTGT+TGG - Chr2:66092863-66092882 MsG0280010198.01.T01:intron 30.0%
! TGGATAAATCCTTTTCTTGA+GGG - Chr2:66095360-66095379 MsG0280010198.01.T01:intron 30.0%
! TTGGATAAATCCTTTTCTTG+AGG - Chr2:66095359-66095378 MsG0280010198.01.T01:intron 30.0%
! TTTCTTTTGTTCCGTTGAAT+GGG - Chr2:66093131-66093150 MsG0280010198.01.T01:intron 30.0%
!! AGTACTTGTTTTCTTTGAAC+CGG - Chr2:66095951-66095970 MsG0280010198.01.T01:intron 30.0%
!! CAAAATTCCATTTTTGCACT+TGG - Chr2:66096165-66096184 MsG0280010198.01.T01:CDS 30.0%
!! TTGAAGTACTGACAAAGAAA+CGG + Chr2:66094531-66094550 None:intergenic 30.0%
!! TTTTAAGTGGATAAAGATGG+AGG - Chr2:66092915-66092934 MsG0280010198.01.T01:intron 30.0%
!!! TAATTTTGAAGGTGTTGTAC+AGG - Chr2:66095662-66095681 MsG0280010198.01.T01:CDS 30.0%
AAAACACATAACCTCCACAA+AGG + Chr2:66092508-66092527 None:intergenic 35.0%
AAAATGAGTAGCTTCCATGT+AGG + Chr2:66097489-66097508 None:intergenic 35.0%
AAATGAGTAGCTTCCATGTA+GGG + Chr2:66097488-66097507 None:intergenic 35.0%
AAGCAAAATGAAGCTTCCTT+AGG + Chr2:66094218-66094237 None:intergenic 35.0%
ACGATAAATTACCCTAGTGT+TGG + Chr2:66094272-66094291 None:intergenic 35.0%
ACTAATATCACCCCATTCAA+CGG + Chr2:66093145-66093164 None:intergenic 35.0%
AGAATATTTGGGAGAGCTTA+TGG - Chr2:66093861-66093880 MsG0280010198.01.T01:intron 35.0%
ATCATAGTTTACGGATACGT+TGG - Chr2:66095748-66095767 MsG0280010198.01.T01:intron 35.0%
ATTATGCATCAGCAGAGTTT+CGG - Chr2:66093444-66093463 MsG0280010198.01.T01:CDS 35.0%
ATTCGCATATGGCAAATGTT+GGG - Chr2:66095256-66095275 MsG0280010198.01.T01:intron 35.0%
CAACGAACAAAGAGATGATA+TGG - Chr2:66094771-66094790 MsG0280010198.01.T01:CDS 35.0%
CAGAATAGCTGTTCAAATGT+TGG + Chr2:66094110-66094129 None:intergenic 35.0%
CAGCTTGCAAGTAATAATGA+AGG + Chr2:66097272-66097291 None:intergenic 35.0%
CATTCAACGGAACAAAAGAA+AGG + Chr2:66093132-66093151 None:intergenic 35.0%
CCCTCATTTCAGATAGTATT+TGG + Chr2:66096040-66096059 None:intergenic 35.0%
CTTATTCTCATAAGGTCTTC+AGG - Chr2:66093919-66093938 MsG0280010198.01.T01:intron 35.0%
GAACACATGGTATTTGATCA+CGG + Chr2:66095916-66095935 None:intergenic 35.0%
GAATTGTGATCAAGAGAGAT+TGG - Chr2:66092744-66092763 MsG0280010198.01.T01:CDS 35.0%
GAGAAGAGTGAGATTTGATA+AGG - Chr2:66097347-66097366 MsG0280010198.01.T01:five_prime_UTR 35.0%
GAGAGTGATCAGAAAAATCA+TGG - Chr2:66095120-66095139 MsG0280010198.01.T01:intron 35.0%
GGATAAACTTTAGTCCTTTG+TGG - Chr2:66092491-66092510 MsG0280010198.01.T01:three_prime_UTR 35.0%
TAAACTTTAGTCCTTTGTGG+AGG - Chr2:66092494-66092513 MsG0280010198.01.T01:three_prime_UTR 35.0%
TACTTCTAATGGAGATGAGT+TGG - Chr2:66093652-66093671 MsG0280010198.01.T01:intron 35.0%
TATCATCTCTTTGTTCGTTG+AGG + Chr2:66094771-66094790 None:intergenic 35.0%
TCTGATGGTTATATTGCTAC+TGG - Chr2:66096761-66096780 MsG0280010198.01.T01:CDS 35.0%
TGAATTGTAATGCTGGCATA+GGG + Chr2:66097011-66097030 None:intergenic 35.0%
TGGAAATAGTCTAATCAGTC+AGG + Chr2:66094671-66094690 None:intergenic 35.0%
TGTACCAATGTCACCATAAA+AGG + Chr2:66092347-66092366 None:intergenic 35.0%
TTATTGCAGGGAGTTAGTAT+CGG - Chr2:66096288-66096307 MsG0280010198.01.T01:CDS 35.0%
TTGAATTGTAATGCTGGCAT+AGG + Chr2:66097012-66097031 None:intergenic 35.0%
TTGCGAAAAATTCTCCATCA+CGG + Chr2:66095488-66095507 None:intergenic 35.0%
TTGTGTTAACAAGGTGATGA+TGG - Chr2:66092817-66092836 MsG0280010198.01.T01:CDS 35.0%
! AATGGGGTGATATTAGTTTG+AGG - Chr2:66093148-66093167 MsG0280010198.01.T01:intron 35.0%
! AGATCCTTTTATGGTGACAT+TGG - Chr2:66092340-66092359 MsG0280010198.01.T01:three_prime_UTR 35.0%
! AGGAAGCTTCATTTTGCTTA+TGG - Chr2:66094219-66094238 MsG0280010198.01.T01:CDS 35.0%
! CTTTCTTTTGTTCCGTTGAA+TGG - Chr2:66093130-66093149 MsG0280010198.01.T01:intron 35.0%
! GATTTTCTTATTCACACCAG+CGG + Chr2:66095511-66095530 None:intergenic 35.0%
! GCCAAATACTATCTGAAATG+AGG - Chr2:66096036-66096055 MsG0280010198.01.T01:intron 35.0%
! GTGATATTAGTTTGAGGCAA+TGG - Chr2:66093154-66093173 MsG0280010198.01.T01:intron 35.0%
! GTGTTGTTGTTCATAATGTG+AGG - Chr2:66093268-66093287 MsG0280010198.01.T01:CDS 35.0%
! TAAGCTATGGAGTATCAATC+AGG - Chr2:66096142-66096161 MsG0280010198.01.T01:CDS 35.0%
! TTCTTTTGTTCCGTTGAATG+GGG - Chr2:66093132-66093151 MsG0280010198.01.T01:intron 35.0%
!! AACCACCTAGGTTTTTGTTT+TGG + Chr2:66093080-66093099 None:intergenic 35.0%
!! AATTCCATTTTTGCACTTGG+TGG - Chr2:66096168-66096187 MsG0280010198.01.T01:CDS 35.0%
!! ACATATGCAGTATTGATGAC+GGG + Chr2:66094696-66094715 None:intergenic 35.0%
!! ATGGAAAAGTTGATGCTGAA+CGG + Chr2:66095005-66095024 None:intergenic 35.0%
!! CACATATGCAGTATTGATGA+CGG + Chr2:66094697-66094716 None:intergenic 35.0%
!! GTACTTGTTTTCTTTGAACC+GGG - Chr2:66095952-66095971 MsG0280010198.01.T01:intron 35.0%
!! TACTTGTTTTCTTTGAACCG+GGG - Chr2:66095953-66095972 MsG0280010198.01.T01:intron 35.0%
!! TTAACTTTGATGATGTGTGG+TGG - Chr2:66092448-66092467 MsG0280010198.01.T01:three_prime_UTR 35.0%
!! TTCAGGTTGTTAACTTTGAC+TGG - Chr2:66092707-66092726 MsG0280010198.01.T01:CDS 35.0%
AAACCCTAAGCTTTCAGTGA+TGG - Chr2:66095837-66095856 MsG0280010198.01.T01:intron 40.0%
AAACGCAAACAGAGAACACA+TGG + Chr2:66095929-66095948 None:intergenic 40.0%
AAGGAAAGGGATTGGATTCA+TGG - Chr2:66093042-66093061 MsG0280010198.01.T01:CDS 40.0%
ACATCCACCAAGTGCAAAAA+TGG + Chr2:66096175-66096194 None:intergenic 40.0%
ACTAGAAAACGAGTCAGACT+AGG - Chr2:66095066-66095085 MsG0280010198.01.T01:CDS 40.0%
AGCTTTCAGTGATGGTAGAA+TGG - Chr2:66095845-66095864 MsG0280010198.01.T01:intron 40.0%
AGTCTCAGATAGGAACCAAA+GGG - Chr2:66092975-66092994 MsG0280010198.01.T01:intron 40.0%
ATATGGCAAATGTTGGGAGA+GGG - Chr2:66095262-66095281 MsG0280010198.01.T01:intron 40.0%
ATCAGCAGATCCAACAATGT+TGG - Chr2:66096094-66096113 MsG0280010198.01.T01:CDS 40.0%
ATCTCCTAAAGAATCTGAGC+TGG + Chr2:66093361-66093380 None:intergenic 40.0%
CAAAGCTGAGCAGTTTATGT+TGG - Chr2:66095607-66095626 MsG0280010198.01.T01:CDS 40.0%
CAAAGGGAAAATCCTTTCTC+CGG - Chr2:66092991-66093010 MsG0280010198.01.T01:intron 40.0%
CACTGGTCACACAAATGTTA+AGG - Chr2:66096587-66096606 MsG0280010198.01.T01:CDS 40.0%
CAGAACACAGATCCAATTTC+TGG - Chr2:66097036-66097055 MsG0280010198.01.T01:five_prime_UTR 40.0%
CATTCGCATATGGCAAATGT+TGG - Chr2:66095255-66095274 MsG0280010198.01.T01:intron 40.0%
CTACCATCACTGAAAGCTTA+GGG + Chr2:66095843-66095862 None:intergenic 40.0%
CTAGAAAACGAGTCAGACTA+GGG - Chr2:66095067-66095086 MsG0280010198.01.T01:CDS 40.0%
CTATCAATGACTGTCATGGA+TGG + Chr2:66095024-66095043 None:intergenic 40.0%
CTGAAAGCTTAGGGTTTACA+TGG + Chr2:66095834-66095853 None:intergenic 40.0%
GACCAAAACAAAAACCTAGG+TGG - Chr2:66093075-66093094 MsG0280010198.01.T01:CDS 40.0%
GATACCAGCTCAGATTCTTT+AGG - Chr2:66093354-66093373 MsG0280010198.01.T01:CDS 40.0%
GGTGACCAAAACAAAAACCT+AGG - Chr2:66093072-66093091 MsG0280010198.01.T01:CDS 40.0%
GGTTTAGAAAGGAAAGGGAT+TGG - Chr2:66093034-66093053 MsG0280010198.01.T01:intron 40.0%
GTGGGATTATCAGTATCTGA+TGG - Chr2:66096746-66096765 MsG0280010198.01.T01:CDS 40.0%
TAATCGCTGCAAATTCCACA+GGG - Chr2:66097124-66097143 MsG0280010198.01.T01:intron 40.0%
TCAATGCGAAACAGCTTGTA+AGG + Chr2:66094387-66094406 None:intergenic 40.0%
TCCACTTCGTTACCAGAAAT+TGG + Chr2:66097051-66097070 None:intergenic 40.0%
TCTACCATCACTGAAAGCTT+AGG + Chr2:66095844-66095863 None:intergenic 40.0%
TGACCAGTGAACGATTGAAT+CGG + Chr2:66096576-66096595 None:intergenic 40.0%
TGCTGATGCATAATATCACG+AGG + Chr2:66093438-66093457 None:intergenic 40.0%
TGCTTCAGATGTTTACCGAT+TGG - Chr2:66093716-66093735 MsG0280010198.01.T01:intron 40.0%
TGTCCAACTAAAGTGCAAAG+CGG + Chr2:66096435-66096454 None:intergenic 40.0%
TGTGGAATTTGCAGCGATTA+GGG + Chr2:66097124-66097143 None:intergenic 40.0%
TTAGGTGTTCGTATACCACA+AGG - Chr2:66096981-66097000 MsG0280010198.01.T01:five_prime_UTR 40.0%
TTGCACAAACCCTCAAGAAA+AGG + Chr2:66095372-66095391 None:intergenic 40.0%
! AAACCTAGGTGGTTTTTGTG+AGG - Chr2:66093086-66093105 MsG0280010198.01.T01:intron 40.0%
! AACCTAGGTGGTTTTTGTGA+GGG - Chr2:66093087-66093106 MsG0280010198.01.T01:intron 40.0%
! ACATCTGAAGCACATGAACT+AGG + Chr2:66093708-66093727 None:intergenic 40.0%
! AGCTCAGATTCTTTAGGAGA+TGG - Chr2:66093360-66093379 MsG0280010198.01.T01:CDS 40.0%
! AGGAACAGGAGATCCTTTTA+TGG - Chr2:66092331-66092350 MsG0280010198.01.T01:three_prime_UTR 40.0%
! AGGAGAATTCTGAGAGTTCT+AGG - Chr2:66092935-66092954 MsG0280010198.01.T01:intron 40.0%
! ATTCTGGAGATGGTTTGAGT+TGG - Chr2:66097156-66097175 MsG0280010198.01.T01:intron 40.0%
! CACTTTAGAAGTAACTGTGG+AGG + Chr2:66094194-66094213 None:intergenic 40.0%
! CGATGAATGTGATGATAACG+TGG - Chr2:66095098-66095117 MsG0280010198.01.T01:intron 40.0%
! CTCCACAGTTACTTCTAAAG+TGG - Chr2:66094192-66094211 MsG0280010198.01.T01:CDS 40.0%
! CTTCAGATGTTTACCGATTG+GGG - Chr2:66093718-66093737 MsG0280010198.01.T01:intron 40.0%
! GAATGTCAAGATTCTGGAGA+TGG - Chr2:66097146-66097165 MsG0280010198.01.T01:intron 40.0%
! GCTTCAGATGTTTACCGATT+GGG - Chr2:66093717-66093736 MsG0280010198.01.T01:intron 40.0%
! GGAGAATTCTGAGAGTTCTA+GGG - Chr2:66092936-66092955 MsG0280010198.01.T01:intron 40.0%
! GTTGTAGATAAAGTGCCACA+TGG - Chr2:66097382-66097401 MsG0280010198.01.T01:five_prime_UTR 40.0%
! TATTAGTTTGAGGCAATGGC+TGG - Chr2:66093158-66093177 MsG0280010198.01.T01:intron 40.0%
! TCTGAGATGTAGCCACAATT+GGG - Chr2:66095884-66095903 MsG0280010198.01.T01:intron 40.0%
! TTTTAACCTCAACACCTCCT+TGG + Chr2:66093398-66093417 None:intergenic 40.0%
!! AACTTGGCTTTGAAAGACCA+AGG - Chr2:66095318-66095337 MsG0280010198.01.T01:intron 40.0%
!! ATAGTTCTGGAGTCTCAGAT+AGG - Chr2:66092965-66092984 MsG0280010198.01.T01:intron 40.0%
!! ATGAGTTGTTTCTCTCACCT+GGG - Chr2:66096262-66096281 MsG0280010198.01.T01:CDS 40.0%
!! GGACAACACTTTGAAGCTTT+GGG - Chr2:66096515-66096534 MsG0280010198.01.T01:CDS 40.0%
!! GTCAGTACTTCAAAGGTGTT+TGG - Chr2:66094538-66094557 MsG0280010198.01.T01:CDS 40.0%
!! GTTACTTCTAAAGTGGCCTA+AGG - Chr2:66094199-66094218 MsG0280010198.01.T01:CDS 40.0%
!! TACTGGTTCAGAGACAAATG+AGG - Chr2:66096778-66096797 MsG0280010198.01.T01:CDS 40.0%
!! TCCAATTTCTGGTAACGAAG+TGG - Chr2:66097047-66097066 MsG0280010198.01.T01:five_prime_UTR 40.0%
!! TCTAGGGCTTTGAATAGTTC+TGG - Chr2:66092952-66092971 MsG0280010198.01.T01:intron 40.0%
!! TTCTGAGATGTAGCCACAAT+TGG - Chr2:66095883-66095902 MsG0280010198.01.T01:intron 40.0%
AAGAAATCCACCGATCGATC+CGG + Chr2:66093189-66093208 None:intergenic 45.0%
ACGACGGTTCAGTTAAGCTA+TGG - Chr2:66096129-66096148 MsG0280010198.01.T01:CDS 45.0%
ACTGAGTGAGCATACTAGGT+TGG + Chr2:66095460-66095479 None:intergenic 45.0%
AGGAAGGATGAAGAAGTGGA+AGG - Chr2:66093600-66093619 MsG0280010198.01.T01:intron 45.0%
AGTAGCTTCCATGTAGGGAA+AGG + Chr2:66097483-66097502 None:intergenic 45.0%
ATATGCGAATGTCTAACCCC+GGG + Chr2:66095246-66095265 None:intergenic 45.0%
ATGCTGTGTTCAGTTTCCTC+TGG - Chr2:66096335-66096354 MsG0280010198.01.T01:CDS 45.0%
CACAGGGAATGTCAAGATTC+TGG - Chr2:66097140-66097159 MsG0280010198.01.T01:intron 45.0%
CAGAATCTTGACATTCCCTG+TGG + Chr2:66097142-66097161 None:intergenic 45.0%
CATATGCGAATGTCTAACCC+CGG + Chr2:66095247-66095266 None:intergenic 45.0%
CATATGGCAAATGTTGGGAG+AGG - Chr2:66095261-66095280 MsG0280010198.01.T01:intron 45.0%
CGAAAAGGAGAATCCCCAAT+CGG + Chr2:66093734-66093753 None:intergenic 45.0%
CGAAACTGAGTGAGCATACT+AGG + Chr2:66095464-66095483 None:intergenic 45.0%
CTAATCGCTGCAAATTCCAC+AGG - Chr2:66097123-66097142 MsG0280010198.01.T01:intron 45.0%
CTCGCTATCAATGACTGTCA+TGG + Chr2:66095028-66095047 None:intergenic 45.0%
CTGTGGAATTTGCAGCGATT+AGG + Chr2:66097125-66097144 None:intergenic 45.0%
GAAAGACGACATGACAAAGC+AGG + Chr2:66093298-66093317 None:intergenic 45.0%
GAATTTGCAGCGATTAGGGT+TGG + Chr2:66097120-66097139 None:intergenic 45.0%
GAGTCTCAGATAGGAACCAA+AGG - Chr2:66092974-66092993 MsG0280010198.01.T01:intron 45.0%
GATGGAGTAAACAACGACCA+AGG - Chr2:66093378-66093397 MsG0280010198.01.T01:CDS 45.0%
GATTGGATTCATGGTGCACA+AGG - Chr2:66093051-66093070 MsG0280010198.01.T01:CDS 45.0%
GCAAAAGATCTCCTTGCTTC+AGG + Chr2:66095431-66095450 None:intergenic 45.0%
GGATCGTGATATCCACTATC+CGG - Chr2:66095563-66095582 MsG0280010198.01.T01:CDS 45.0%
GTTAATGCAGCACACTGTCA+AGG - Chr2:66093246-66093265 MsG0280010198.01.T01:CDS 45.0%
TACACAGTCCTTTCCCTACA+TGG - Chr2:66097472-66097491 MsG0280010198.01.T02:intron 45.0%
TAGGAGGAAGGATGAAGAAG+TGG - Chr2:66093596-66093615 MsG0280010198.01.T01:intron 45.0%
TAGTTTACGGATACGTTGGC+AGG - Chr2:66095752-66095771 MsG0280010198.01.T01:intron 45.0%
TATGCCTGCCAAGATTTCGA+CGG - Chr2:66093479-66093498 MsG0280010198.01.T01:CDS 45.0%
TCGATACCTCGCATTTGGTT+CGG - Chr2:66096365-66096384 MsG0280010198.01.T01:CDS 45.0%
TCTCTCTCTCTCTCTCTCTA+TGG - Chr2:66092382-66092401 MsG0280010198.01.T01:three_prime_UTR 45.0%
TGATATCCACTATCCGGTAG+TGG - Chr2:66095569-66095588 MsG0280010198.01.T01:CDS 45.0%
TGCAAACCATCCTATTCCTC+AGG - Chr2:66095216-66095235 MsG0280010198.01.T01:intron 45.0%
TTCTCTTCTCTTGAGCTCAG+TGG + Chr2:66094134-66094153 None:intergenic 45.0%
TTGAAAGACCAAGGAAGGGA+CGG - Chr2:66095327-66095346 MsG0280010198.01.T01:intron 45.0%
TTGGTACACTAGTCCTGAAG+AGG - Chr2:66093671-66093690 MsG0280010198.01.T01:intron 45.0%
TTGTAATGCTGGCATAGGGA+AGG + Chr2:66097007-66097026 None:intergenic 45.0%
! AGATTGCTGGCGTTGAACTA+GGG - Chr2:66094971-66094990 MsG0280010198.01.T01:CDS 45.0%
! AGTTTGTCTCCTCGGTTTGT+TGG - Chr2:66097082-66097101 MsG0280010198.01.T01:five_prime_UTR 45.0%
! ATTGGGGATTCTCCTTTTCG+AGG - Chr2:66093734-66093753 MsG0280010198.01.T01:intron 45.0%
! ATTTGTTAGAACAGCGACCC+CGG + Chr2:66095973-66095992 None:intergenic 45.0%
! CGGAGAAAGGATTTTCCCTT+TGG + Chr2:66092993-66093012 None:intergenic 45.0%
! GGCCACTTTAGAAGTAACTG+TGG + Chr2:66094197-66094216 None:intergenic 45.0%
!! AAGCTTCAAAGTGTTGTCCG+TGG + Chr2:66096514-66096533 None:intergenic 45.0%
!! ACTTTGATGATGTGTGGTGG+TGG - Chr2:66092451-66092470 MsG0280010198.01.T01:three_prime_UTR 45.0%
!! CATGACAGTCATTGATAGCG+AGG - Chr2:66095026-66095045 MsG0280010198.01.T01:CDS 45.0%
!! CGGACAACACTTTGAAGCTT+TGG - Chr2:66096514-66096533 MsG0280010198.01.T01:CDS 45.0%
!! GATGAGTTGTTTCTCTCACC+TGG - Chr2:66096261-66096280 MsG0280010198.01.T01:CDS 45.0%
!! GGCTTTGAAAGACCAAGGAA+GGG - Chr2:66095323-66095342 MsG0280010198.01.T01:intron 45.0%
!! TGCAGTATTGATGACGGGAT+TGG + Chr2:66094691-66094710 None:intergenic 45.0%
!! TGGCTTTGAAAGACCAAGGA+AGG - Chr2:66095322-66095341 MsG0280010198.01.T01:intron 45.0%
!! TTCGATACTCTGGCTCTGTT+TGG - Chr2:66093800-66093819 MsG0280010198.01.T01:intron 45.0%
!! TAAATAAAAAAAACAATAAA+GGG + Chr2:66092649-66092668 None:intergenic 5.0%
!!! TTTAATTATATTTTTTAGTT+TGG - Chr2:66092574-66092593 MsG0280010198.01.T01:three_prime_UTR 5.0%
AACCGAGGAGACAAACTGTG+CGG + Chr2:66097079-66097098 None:intergenic 50.0%
ACTAGTCCTGAAGAGGTTGC+TGG - Chr2:66093678-66093697 MsG0280010198.01.T01:intron 50.0%
AGAATCTTGTGATCCCTCGC+CGG + Chr2:66093013-66093032 None:intergenic 50.0%
AGCGAGGATTCTGCTTGTCT+AGG - Chr2:66095042-66095061 MsG0280010198.01.T01:CDS 50.0%
AGGATCTCCTGTTCCTGCTT+AGG + Chr2:66092327-66092346 None:intergenic 50.0%
CAACCTTGTCTCTGCATCCA+CGG - Chr2:66096494-66096513 MsG0280010198.01.T01:CDS 50.0%
CACCCTCACAAAAACCACCT+AGG + Chr2:66093092-66093111 None:intergenic 50.0%
CCAAGATTTCGACGGATGCT+CGG - Chr2:66093487-66093506 MsG0280010198.01.T01:CDS 50.0%
CGGGGTTAGACATTCGCATA+TGG - Chr2:66095245-66095264 MsG0280010198.01.T01:intron 50.0%
CTAGCAGTCGTCCAACACTA+GGG - Chr2:66094258-66094277 MsG0280010198.01.T01:CDS 50.0%
GAAAATCCTTTCTCCGGCGA+GGG - Chr2:66092997-66093016 MsG0280010198.01.T01:intron 50.0%
GACGACATGACAAAGCAGGA+AGG + Chr2:66093294-66093313 None:intergenic 50.0%
GAGGCAATGGCTGGATAAAC+CGG - Chr2:66093167-66093186 MsG0280010198.01.T01:intron 50.0%
GATCCAACAATGTTGGCGAG+TGG - Chr2:66096101-66096120 MsG0280010198.01.T01:CDS 50.0%
GCGAGGGATCACAAGATTCT+AGG - Chr2:66093013-66093032 MsG0280010198.01.T01:intron 50.0%
GCTGGATAAACCGGATCGAT+CGG - Chr2:66093176-66093195 MsG0280010198.01.T01:intron 50.0%
GGAGTAAACAACGACCAAGG+AGG - Chr2:66093381-66093400 MsG0280010198.01.T01:CDS 50.0%
GGTCTTCCTGAGGAATAGGA+TGG + Chr2:66095225-66095244 None:intergenic 50.0%
GTTAAGGCTGACCTGAAGCA+AGG - Chr2:66095417-66095436 MsG0280010198.01.T01:intron 50.0%
TCACCTGGGCTGTTATTGCA+GGG - Chr2:66096276-66096295 MsG0280010198.01.T01:CDS 50.0%
TCACGAGGACAGTGAGATGT+CGG + Chr2:66093423-66093442 None:intergenic 50.0%
TCACGGAGTTAGCCCAATTG+TGG + Chr2:66095899-66095918 None:intergenic 50.0%
TCACTCAGTTTCGACCGTGA+TGG - Chr2:66095471-66095490 MsG0280010198.01.T01:intron 50.0%
TCCTATTCCTCAGGAAGACC+CGG - Chr2:66095225-66095244 MsG0280010198.01.T01:intron 50.0%
! CTAGTGTTGGACGACTGCTA+GGG + Chr2:66094259-66094278 None:intergenic 50.0%
! GAGATTGCTGGCGTTGAACT+AGG - Chr2:66094970-66094989 MsG0280010198.01.T01:CDS 50.0%
! GGAGAATTTTTCGCAACCGC+TGG - Chr2:66095492-66095511 MsG0280010198.01.T01:intron 50.0%
!! ACCAAATGCGAGGTATCGAG+CGG + Chr2:66096364-66096383 None:intergenic 50.0%
!! GTGCCGCTTTGCACTTTAGT+TGG - Chr2:66096429-66096448 MsG0280010198.01.T01:CDS 50.0%
!! TCGCCGATTCAATCGTTCAC+TGG - Chr2:66096570-66096589 MsG0280010198.01.T01:CDS 50.0%
ACTCCCTGCAATAACAGCCC+AGG + Chr2:66096282-66096301 None:intergenic 55.0%
CCATCTCCACTACCGGATAG+TGG + Chr2:66095578-66095597 None:intergenic 55.0%
CCGAGCATCCGTCGAAATCT+TGG + Chr2:66093490-66093509 None:intergenic 55.0%
CCTAGCAGTCGTCCAACACT+AGG - Chr2:66094257-66094276 MsG0280010198.01.T01:CDS 55.0%
CCTATTCCTCAGGAAGACCC+GGG - Chr2:66095226-66095245 MsG0280010198.01.T01:intron 55.0%
CTATTCCTCAGGAAGACCCG+GGG - Chr2:66095227-66095246 MsG0280010198.01.T01:intron 55.0%
CTCACCTGGGCTGTTATTGC+AGG - Chr2:66096275-66096294 MsG0280010198.01.T01:CDS 55.0%
CTGCAAGCCATCTCCACTAC+CGG + Chr2:66095585-66095604 None:intergenic 55.0%
CTGCCACTCGCCAACATTGT+TGG + Chr2:66096107-66096126 None:intergenic 55.0%
GATCTGCCGAACCAAATGCG+AGG + Chr2:66096374-66096393 None:intergenic 55.0%
GCATCCGTCGAAATCTTGGC+AGG + Chr2:66093486-66093505 None:intergenic 55.0%
GGAAAATCCTTTCTCCGGCG+AGG - Chr2:66092996-66093015 MsG0280010198.01.T01:intron 55.0%
GGATAAACCGGATCGATCGG+TGG - Chr2:66093179-66093198 MsG0280010198.01.T01:intron 55.0%
TCCGCTCGATACCTCGCATT+TGG - Chr2:66096360-66096379 MsG0280010198.01.T01:CDS 55.0%
TGCCGCACAGTTTGTCTCCT+CGG - Chr2:66097074-66097093 MsG0280010198.01.T01:five_prime_UTR 55.0%
TGTCCGTGGATGCAGAGACA+AGG + Chr2:66096500-66096519 None:intergenic 55.0%
! CCTAGTGTTGGACGACTGCT+AGG + Chr2:66094260-66094279 None:intergenic 55.0%
! CTGAAATGAGGGAGCACGAG+CGG - Chr2:66096048-66096067 MsG0280010198.01.T01:intron 55.0%
! GCTGTCAAGTGCTGTGTACG+CGG - Chr2:66093527-66093546 MsG0280010198.01.T01:intron 55.0%
! GGAGTACCAGCAACCTCTTC+AGG + Chr2:66093687-66093706 None:intergenic 55.0%
!! AGGTATCGAGCGGAATCCAG+AGG + Chr2:66096354-66096373 None:intergenic 55.0%
!! CAACGACCAAGGAGGTGTTG+AGG - Chr2:66093389-66093408 MsG0280010198.01.T01:CDS 55.0%
!! CCACTATCCGGTAGTGGAGA+TGG - Chr2:66095575-66095594 MsG0280010198.01.T01:CDS 55.0%
ACGTTGGCAGGTCGCTCAAG+TGG - Chr2:66095764-66095783 MsG0280010198.01.T01:intron 60.0%
CCCGGGTCTTCCTGAGGAAT+AGG + Chr2:66095229-66095248 None:intergenic 60.0%
CGTTGGCAGGTCGCTCAAGT+GGG - Chr2:66095765-66095784 MsG0280010198.01.T01:intron 60.0%
CTGACCACGCCAACAAACCG+AGG + Chr2:66097094-66097113 None:intergenic 60.0%
CTGGCATAGGGAAGGCCTTG+TGG + Chr2:66096999-66097018 None:intergenic 60.0%
GTTGGACGACTGCTAGGGTC+AGG + Chr2:66094254-66094273 None:intergenic 60.0%
GTTGGCAGGTCGCTCAAGTG+GGG - Chr2:66095766-66095785 MsG0280010198.01.T01:intron 60.0%
TCTAACCCCGGGTCTTCCTG+AGG + Chr2:66095235-66095254 None:intergenic 60.0%
TGTGATCCCTCGCCGGAGAA+AGG + Chr2:66093006-66093025 None:intergenic 60.0%
TTGGCAGGTCGCTCAAGTGG+GGG - Chr2:66095767-66095786 MsG0280010198.01.T01:intron 60.0%
!! CGGTAGTGGAGATGGCTTGC+AGG - Chr2:66095583-66095602 MsG0280010198.01.T01:CDS 60.0%
!! GTCTCCTCGGTTTGTTGGCG+TGG - Chr2:66097087-66097106 MsG0280010198.01.T01:five_prime_UTR 60.0%
CACTTGCGCCGTCCCTTCCT+TGG + Chr2:66095338-66095357 None:intergenic 65.0%
GAAGGGACGGCGCAAGTGCT+TGG - Chr2:66095340-66095359 MsG0280010198.01.T01:intron 65.0%
TTGGCGAGTGGCAGCGACGA+CGG - Chr2:66096113-66096132 MsG0280010198.01.T01:CDS 65.0%
! GGGAGCACGAGCGGCGAGTG+TGG - Chr2:66096057-66096076 MsG0280010198.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 66092322 66097513 66092322 ID=MsG0280010198.01;Name=MsG0280010198.01
Chr2 mRNA 66092322 66097434 66092322 ID=MsG0280010198.01.T01;Parent=MsG0280010198.01;Name=MsG0280010198.01.T01;_AED=0.33;_eAED=0.33;_QI=334|0.83|1|1|0.83|0.71|7|340|826
Chr2 exon 66097320 66097434 66097320 ID=MsG0280010198.01.T01:exon:5249;Parent=MsG0280010198.01.T01
Chr2 five_prime_UTR 66097320 66097434 66097320 ID=MsG0280010198.01.T01:five_prime_utr;Parent=MsG0280010198.01.T01
Chr2 five_prime_UTR 66096905 66097123 66096905 ID=MsG0280010198.01.T01:five_prime_utr;Parent=MsG0280010198.01.T01
Chr2 CDS 66096080 66096904 66096080 ID=MsG0280010198.01.T01:cds;Parent=MsG0280010198.01.T01
Chr2 CDS 66095556 66095713 66095556 ID=MsG0280010198.01.T01:cds;Parent=MsG0280010198.01.T01
Chr2 CDS 66094152 66095088 66094152 ID=MsG0280010198.01.T01:cds;Parent=MsG0280010198.01.T01
Chr2 CDS 66093227 66093538 66093227 ID=MsG0280010198.01.T01:cds;Parent=MsG0280010198.01.T01
Chr2 CDS 66093036 66093095 66093036 ID=MsG0280010198.01.T01:cds;Parent=MsG0280010198.01.T01
Chr2 CDS 66092662 66092850 66092662 ID=MsG0280010198.01.T01:cds;Parent=MsG0280010198.01.T01
Chr2 three_prime_UTR 66092322 66092661 66092322 ID=MsG0280010198.01.T01:three_prime_utr;Parent=MsG0280010198.01.T01
Chr2 mRNA 66092322 66097513 66092322 ID=MsG0280010198.01.T02;Parent=MsG0280010198.01;Name=MsG0280010198.01.T02;_AED=0.34;_eAED=0.34;_QI=259|0.83|1|1|0.83|0.71|7|340|826
Chr2 exon 66097474 66097513 66097474 ID=MsG0280010198.01.T02:exon:5256;Parent=MsG0280010198.01.T02
Chr2 five_prime_UTR 66097474 66097513 66097474 ID=MsG0280010198.01.T02:five_prime_utr;Parent=MsG0280010198.01.T02
Chr2 five_prime_UTR 66096905 66097123 66096905 ID=MsG0280010198.01.T02:five_prime_utr;Parent=MsG0280010198.01.T02
Chr2 CDS 66096080 66096904 66096080 ID=MsG0280010198.01.T02:cds;Parent=MsG0280010198.01.T02
Chr2 CDS 66095556 66095713 66095556 ID=MsG0280010198.01.T02:cds;Parent=MsG0280010198.01.T02
Chr2 CDS 66094152 66095088 66094152 ID=MsG0280010198.01.T02:cds;Parent=MsG0280010198.01.T02
Chr2 CDS 66093227 66093538 66093227 ID=MsG0280010198.01.T02:cds;Parent=MsG0280010198.01.T02
Chr2 CDS 66093036 66093095 66093036 ID=MsG0280010198.01.T02:cds;Parent=MsG0280010198.01.T02
Chr2 CDS 66092662 66092850 66092662 ID=MsG0280010198.01.T02:cds;Parent=MsG0280010198.01.T02
Chr2 three_prime_UTR 66092322 66092661 66092322 ID=MsG0280010198.01.T02:three_prime_utr;Parent=MsG0280010198.01.T02
Gene Sequence

>MsG0280010198.01.T01

ATGGAGGAGAATTCTGAGAGTTCTAGGGCTTTGAATAGTTCTGGAGTCTCAGATAGGAACCAAAGGGAAAATCCTTTCTCCGGCGAGGGATCACAAGATTCTAGGTTTAGAAAGGAAAGGGATTGGATTCATGGTGCACAAGGTGACCAAAACAAAAACCTAGGTGGTTTTTGTGAGGGTGAAGAAGTAGAGAATGATCCTTTCTTTTGTTCCGTTGAATGGGGTGATATTAGTTTGAGGCAATGGCTGGATAAACCGGATCGATCGGTGGATTTCTTTGAATGCTTGCACGTATTTAGACAAATAGTTGAGATTGTTAATGCAGCACACTGTCAAGGTGTTGTTGTTCATAATGTGAGGCCTTCCTGCTTTGTCATGTCGTCTTTCAACCATATATCGTTTATTGAATCAGCTTCTTGTTCGGATACCAGCTCAGATTCTTTAGGAGATGGAGTAAACAACGACCAAGGAGGTGTTGAGGTTAAAACTCCGACATCTCACTGTCCTCGTGATATTATGCATCAGCAGAGTTTCGGAAGTGAAGATTTTATGCCTGCCAAGATTTCGACGGATGCTCGGTCTGATTCTAGTTGCATGCTGTCAAGTGCTGTGTACGCGGCTCGTGCGTCGTTAATAGAAGAAACAGAAGAAAATAAAATGAAAGATAGGAGGAAGGATGAAGAAGTGGAAGGTAAGAAGCAATCGTTTCCGATGAAACAGATACTTCTAATGGAGATGAGTTGGTACACTAGTCCTGAAGAGGTTGCTGGTACTCCTAGTTCATGTGCTTCAGATGTTTACCGATTGGGGATTCTCCTTTTCGAGCTATTCTGTCCACTGAGCTCAAGAGAAGAGAAAAGTAGAACAATGTCTAGTCTTAGACATAGAGTTCTTCCTCCACAGTTACTTCTAAAGTGGCCTAAGGAAGCTTCATTTTGCTTATGGTTACTACATCCTGACCCTAGCAGTCGTCCAACACTAGGGGAGTTGTTGCAGAGTGAGTTCCTCAACGAACAAAGAGATGATATGGAAGAACGTGAAGCAGCAATAGAGCTTAGACAAAAGATAGAAGATGAGGAGTTGTTGCTAGAATTCCTTTCATTACTTAAACAAAGAAAACAAGAAGTTGCTGAAAAGTTGCAACATACTATCTCTTTTCTATGTTCAGATATTGAAGAAGTGACCAAGAAGCAAACTAGATTTAAAGAGATTGCTGGCGTTGAACTAGGGAGTGACGACCGTTCAGCATCAACTTTTCCATCCATGACAGTCATTGATAGCGAGGATTCTGCTTGTCTAGGAACTAGAAAACGAGTCAGACTAGGGATGCATCTCGATGAATGTGATGATAACGTGGAGAGTGATCAGAAAAATCATGGAAGTTTTCTTTCAAAAAATTCGCGACTAATGAAAAACTTTAAGAAGCTCGAGTCAGCGTACTTTTTAACACGATGCAAACCATCCTATTCCTCAGGAAGACCCGGGGTTAGACATTCGCATATGGCAAATGTTGGGAGAGGGTCTGTCGTCATGAGTGAAAGAAGTTGCATCAATAACTTGGCTTTGAAAGACCAAGGAAGGGACGGCGCAAGTGCTTGGATAAATCCTTTTCTTGAGGGTTTGTGCAAGTACTTATCTTTCAGTAAGCTTAAAGTTAAGGCTGACCTGAAGCAAGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCACTCAGTTTCGACCGTGATGGAGAATTTTTCGCAACCGCTGGTGTGAATAAGAAAATCAAAATATTTGAATGTGATACAATCATAAAAGAGGATCGTGATATCCACTATCCGGTAGTGGAGATGGCTTGCAGGTCAAAGCTGAGCAGTTTATGTTGGAATACATACATCAAAAGTCAAATTGCTTCAAGTAATTTTGAAGGTGTTGTACAGGGAGTTAGTATCGGTACCATCAAAACGAAGGCAAATGTATGCTGTGTTCAGTTTCCTCTGGATTCCGCTCGATACCTCGCATTTGGTTCGGCAGATCACCAGATATATTACTATGATCTACGCAACTTAAGAGTGCCGCTTTGCACTTTAGTTGGACATAATAAGACGGTGAGCTACATCAAGTTTGTCGACAATGTCAACCTTGTCTCTGCATCCACGGACAACACTTTGAAGCTTTGGGATTTGTCTACATGTACATCTCGAGTTATTGACTCGCCGATTCAATCGTTCACTGGTCACACAAATGTTAAGAATTTTGTGGGATTATCAGTATCTGATGGTTATATTGCTACTGGTTCAGAGACAAATGAGGTGTTCGTATACCACAAGGCCTTCCCTATGCCAGCATTACAATTCAAGTTTCAGAACACAGATCCAATTTCTGGTAACGAAGTGGACGATGCCGCACAGTTTGTCTCCTCGGTTTGTTGGCGTGGTCAGTCGCCAACCCTAATCGCTGCAAATTCCACAGGGAATGTCAAGATTCTGGAGATGGTTTGA

>MsG0280010198.01.T02

ATGGAGGAGAATTCTGAGAGTTCTAGGGCTTTGAATAGTTCTGGAGTCTCAGATAGGAACCAAAGGGAAAATCCTTTCTCCGGCGAGGGATCACAAGATTCTAGGTTTAGAAAGGAAAGGGATTGGATTCATGGTGCACAAGGTGACCAAAACAAAAACCTAGGTGGTTTTTGTGAGGGTGAAGAAGTAGAGAATGATCCTTTCTTTTGTTCCGTTGAATGGGGTGATATTAGTTTGAGGCAATGGCTGGATAAACCGGATCGATCGGTGGATTTCTTTGAATGCTTGCACGTATTTAGACAAATAGTTGAGATTGTTAATGCAGCACACTGTCAAGGTGTTGTTGTTCATAATGTGAGGCCTTCCTGCTTTGTCATGTCGTCTTTCAACCATATATCGTTTATTGAATCAGCTTCTTGTTCGGATACCAGCTCAGATTCTTTAGGAGATGGAGTAAACAACGACCAAGGAGGTGTTGAGGTTAAAACTCCGACATCTCACTGTCCTCGTGATATTATGCATCAGCAGAGTTTCGGAAGTGAAGATTTTATGCCTGCCAAGATTTCGACGGATGCTCGGTCTGATTCTAGTTGCATGCTGTCAAGTGCTGTGTACGCGGCTCGTGCGTCGTTAATAGAAGAAACAGAAGAAAATAAAATGAAAGATAGGAGGAAGGATGAAGAAGTGGAAGGTAAGAAGCAATCGTTTCCGATGAAACAGATACTTCTAATGGAGATGAGTTGGTACACTAGTCCTGAAGAGGTTGCTGGTACTCCTAGTTCATGTGCTTCAGATGTTTACCGATTGGGGATTCTCCTTTTCGAGCTATTCTGTCCACTGAGCTCAAGAGAAGAGAAAAGTAGAACAATGTCTAGTCTTAGACATAGAGTTCTTCCTCCACAGTTACTTCTAAAGTGGCCTAAGGAAGCTTCATTTTGCTTATGGTTACTACATCCTGACCCTAGCAGTCGTCCAACACTAGGGGAGTTGTTGCAGAGTGAGTTCCTCAACGAACAAAGAGATGATATGGAAGAACGTGAAGCAGCAATAGAGCTTAGACAAAAGATAGAAGATGAGGAGTTGTTGCTAGAATTCCTTTCATTACTTAAACAAAGAAAACAAGAAGTTGCTGAAAAGTTGCAACATACTATCTCTTTTCTATGTTCAGATATTGAAGAAGTGACCAAGAAGCAAACTAGATTTAAAGAGATTGCTGGCGTTGAACTAGGGAGTGACGACCGTTCAGCATCAACTTTTCCATCCATGACAGTCATTGATAGCGAGGATTCTGCTTGTCTAGGAACTAGAAAACGAGTCAGACTAGGGATGCATCTCGATGAATGTGATGATAACGTGGAGAGTGATCAGAAAAATCATGGAAGTTTTCTTTCAAAAAATTCGCGACTAATGAAAAACTTTAAGAAGCTCGAGTCAGCGTACTTTTTAACACGATGCAAACCATCCTATTCCTCAGGAAGACCCGGGGTTAGACATTCGCATATGGCAAATGTTGGGAGAGGGTCTGTCGTCATGAGTGAAAGAAGTTGCATCAATAACTTGGCTTTGAAAGACCAAGGAAGGGACGGCGCAAGTGCTTGGATAAATCCTTTTCTTGAGGGTTTGTGCAAGTACTTATCTTTCAGTAAGCTTAAAGTTAAGGCTGACCTGAAGCAAGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCACTCAGTTTCGACCGTGATGGAGAATTTTTCGCAACCGCTGGTGTGAATAAGAAAATCAAAATATTTGAATGTGATACAATCATAAAAGAGGATCGTGATATCCACTATCCGGTAGTGGAGATGGCTTGCAGGTCAAAGCTGAGCAGTTTATGTTGGAATACATACATCAAAAGTCAAATTGCTTCAAGTAATTTTGAAGGTGTTGTACAGGGAGTTAGTATCGGTACCATCAAAACGAAGGCAAATGTATGCTGTGTTCAGTTTCCTCTGGATTCCGCTCGATACCTCGCATTTGGTTCGGCAGATCACCAGATATATTACTATGATCTACGCAACTTAAGAGTGCCGCTTTGCACTTTAGTTGGACATAATAAGACGGTGAGCTACATCAAGTTTGTCGACAATGTCAACCTTGTCTCTGCATCCACGGACAACACTTTGAAGCTTTGGGATTTGTCTACATGTACATCTCGAGTTATTGACTCGCCGATTCAATCGTTCACTGGTCACACAAATGTTAAGAATTTTGTGGGATTATCAGTATCTGATGGTTATATTGCTACTGGTTCAGAGACAAATGAGGTGTTCGTATACCACAAGGCCTTCCCTATGCCAGCATTACAATTCAAGTTTCAGAACACAGATCCAATTTCTGGTAACGAAGTGGACGATGCCGCACAGTTTGTCTCCTCGGTTTGTTGGCGTGGTCAGTCGCCAACCCTAATCGCTGCAAATTCCACAGGGAATGTCAAGATTCTGGAGATGGTTTGA

Protein sequence

>MsG0280010198.01.T01

MEENSESSRALNSSGVSDRNQRENPFSGEGSQDSRFRKERDWIHGAQGDQNKNLGGFCEGEEVENDPFFCSVEWGDISLRQWLDKPDRSVDFFECLHVFRQIVEIVNAAHCQGVVVHNVRPSCFVMSSFNHISFIESASCSDTSSDSLGDGVNNDQGGVEVKTPTSHCPRDIMHQQSFGSEDFMPAKISTDARSDSSCMLSSAVYAARASLIEETEENKMKDRRKDEEVEGKKQSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSSRPTLGELLQSEFLNEQRDDMEEREAAIELRQKIEDEELLLEFLSLLKQRKQEVAEKLQHTISFLCSDIEEVTKKQTRFKEIAGVELGSDDRSASTFPSMTVIDSEDSACLGTRKRVRLGMHLDECDDNVESDQKNHGSFLSKNSRLMKNFKKLESAYFLTRCKPSYSSGRPGVRHSHMANVGRGSVVMSERSCINNLALKDQGRDGASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDTIIKEDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASSNFEGVVQGVSIGTIKTKANVCCVQFPLDSARYLAFGSADHQIYYYDLRNLRVPLCTLVGHNKTVSYIKFVDNVNLVSASTDNTLKLWDLSTCTSRVIDSPIQSFTGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPALQFKFQNTDPISGNEVDDAAQFVSSVCWRGQSPTLIAANSTGNVKILEMV*

>MsG0280010198.01.T02

MEENSESSRALNSSGVSDRNQRENPFSGEGSQDSRFRKERDWIHGAQGDQNKNLGGFCEGEEVENDPFFCSVEWGDISLRQWLDKPDRSVDFFECLHVFRQIVEIVNAAHCQGVVVHNVRPSCFVMSSFNHISFIESASCSDTSSDSLGDGVNNDQGGVEVKTPTSHCPRDIMHQQSFGSEDFMPAKISTDARSDSSCMLSSAVYAARASLIEETEENKMKDRRKDEEVEGKKQSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSSRPTLGELLQSEFLNEQRDDMEEREAAIELRQKIEDEELLLEFLSLLKQRKQEVAEKLQHTISFLCSDIEEVTKKQTRFKEIAGVELGSDDRSASTFPSMTVIDSEDSACLGTRKRVRLGMHLDECDDNVESDQKNHGSFLSKNSRLMKNFKKLESAYFLTRCKPSYSSGRPGVRHSHMANVGRGSVVMSERSCINNLALKDQGRDGASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDTIIKEDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASSNFEGVVQGVSIGTIKTKANVCCVQFPLDSARYLAFGSADHQIYYYDLRNLRVPLCTLVGHNKTVSYIKFVDNVNLVSASTDNTLKLWDLSTCTSRVIDSPIQSFTGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPALQFKFQNTDPISGNEVDDAAQFVSSVCWRGQSPTLIAANSTGNVKILEMV*