AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006523.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006523.01.T01 MTR_2g010110 78.165 316 20 5 1 286 70 366 2.69e-150 471
MsG0280006523.01.T01 MTR_2g010110 83.212 274 16 3 454 723 841 1088 3.06e-117 382
MsG0280006523.01.T01 MTR_2g010110 57.143 245 15 4 282 436 483 727 2.66e-64 233
MsG0280006523.01.T01 MTR_2g086320 73.333 75 16 1 328 402 17 87 5.92e-25 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006523.01.T01 AT5G64420 52.778 288 91 4 29 286 127 399 1.83e-80 281
MsG0280006523.01.T01 AT5G64420 54.440 259 85 5 454 706 885 1116 7.78e-52 196
MsG0280006523.01.T01 AT5G64420 39.683 252 51 5 285 435 519 770 1.10e-34 142

Find 199 sgRNAs with CRISPR-Local

Find 472 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCCGCATCCTTTCATTAT+TGG 0.108234 2:+3079495 MsG0280006523.01.T01:CDS
AAAATCCAAAAGGAAGAATT+TGG 0.123258 2:-3080023 None:intergenic
TCTACAGACAGTTCCATTTA+TGG 0.143885 2:+3075722 MsG0280006523.01.T01:CDS
TGCTGTATTTGGCTTTATTT+TGG 0.164794 2:+3080201 MsG0280006523.01.T01:three_prime_UTR
AAAGGAAATAATGAAGTTTA+TGG 0.180478 2:+3076682 MsG0280006523.01.T01:CDS
GTTTCATATTGGTGTGTTTA+AGG 0.180924 2:+3073638 MsG0280006523.01.T01:CDS
GAAGCTTCAAAATTCATTTA+AGG 0.184972 2:+3080670 MsG0280006523.01.T01:three_prime_UTR
TAAACTCGTAGTAGATTTAT+TGG 0.186853 2:+3074881 MsG0280006523.01.T01:CDS
ATAAATCTACTACGAGTTTA+AGG 0.201598 2:-3074878 None:intergenic
TGGTAGTAGTTTGCCATAAA+TGG 0.204218 2:-3075735 None:intergenic
CCCGCATCTGGATGTCTTGC+AGG 0.208201 2:-3079175 None:intergenic
TTTGCCCAAATTCTTCCTTT+TGG 0.218553 2:+3080018 MsG0280006523.01.T01:CDS
AATGAAGTTTATGGCTGTTC+AGG 0.254880 2:+3076691 MsG0280006523.01.T01:CDS
ATTCCTTTGTTTGAAGAAAC+TGG 0.256200 2:+3080544 MsG0280006523.01.T01:three_prime_UTR
TGGATTGGCCATGCTGTATT+TGG 0.268961 2:+3080190 MsG0280006523.01.T01:three_prime_UTR
TTTGAGTTGGACGAGAATTT+AGG 0.270503 2:+3076752 MsG0280006523.01.T01:CDS
GAGATTCAAGTGTCGATAAT+TGG 0.285987 2:-3079886 None:intergenic
ACAGACGAAAATTCTGAAAT+AGG 0.294275 2:+3076530 MsG0280006523.01.T01:CDS
CTGCCTTGAACCGATATAAA+TGG 0.294536 2:+3079987 MsG0280006523.01.T01:CDS
TTGGTAGAGCTGAACGGATT+TGG 0.321158 2:-3075755 None:intergenic
AACTAGCATCAAAACCATTT+AGG 0.324731 2:+3079927 MsG0280006523.01.T01:CDS
TCCTGAGGCTCAAGCTGCTT+TGG 0.324924 2:+3080502 MsG0280006523.01.T01:three_prime_UTR
AGCTGATTTCTTTGAGGGAT+TGG 0.334746 2:-3079966 None:intergenic
TCTGAATCATCAGAATCTTC+AGG 0.341427 2:-3079355 None:intergenic
CTGGTGCTATCGACAAAATC+AGG 0.343136 2:+3074844 MsG0280006523.01.T01:CDS
GCTCTTGCAGTGTGCGCGAC+AGG 0.343666 2:+3074794 MsG0280006523.01.T01:intron
CCTATTCGCATATGGTGCTT+TGG 0.344339 2:+3075042 MsG0280006523.01.T01:CDS
TCTTACTGTGTACTCACATT+TGG 0.348622 2:+3079745 MsG0280006523.01.T01:CDS
TCATCTGCACTTCCCGCATC+TGG 0.348902 2:-3079187 None:intergenic
CTTCCTGAGTAATTGTTTGA+AGG 0.360884 2:+3075802 MsG0280006523.01.T01:CDS
AAAGAATCTCCTAGGACTAA+TGG 0.365603 2:+3076566 MsG0280006523.01.T01:CDS
CGGCGGTGAATGAATCGATT+AGG 0.368057 2:+3073667 MsG0280006523.01.T01:CDS
CCGACAAATTCTTTGATGTA+TGG 0.378528 2:-3075112 None:intergenic
GACTCGCCGAAAGTCTGATT+TGG 0.381818 2:-3080239 None:intergenic
AAGGAAGAAACCATTTATAT+CGG 0.384835 2:-3079997 None:intergenic
CTCTTGCAGTGTGCGCGACA+GGG 0.392256 2:+3074795 MsG0280006523.01.T01:intron
TCCAAAGCAGCTTGAGCCTC+AGG 0.392723 2:-3080503 None:intergenic
AAGAATCTCCTAGGACTAAT+GGG 0.392912 2:+3076567 MsG0280006523.01.T01:CDS
GGAAGCAAAAGATTGTCTTC+TGG 0.393079 2:+3075015 MsG0280006523.01.T01:intron
GAAGCAAAAGATTGTCTTCT+GGG 0.403903 2:+3075016 MsG0280006523.01.T01:CDS
CAAGGCAGCTGATTTCTTTG+AGG 0.408677 2:-3079972 None:intergenic
TACTTATCTCCCTTGCAAAT+AGG 0.412858 2:+3075137 MsG0280006523.01.T01:CDS
GCTCTTCTTGCCTGTTTGCT+CGG 0.413592 2:-3080399 None:intergenic
AAATCCAAAAGGAAGAATTT+GGG 0.414050 2:-3080022 None:intergenic
GCGAGTCGAAGCACTTGAAT+TGG 0.414700 2:+3080255 MsG0280006523.01.T01:three_prime_UTR
AAAGCAAGGAATAGAGCATC+AGG 0.414753 2:-3075680 None:intergenic
AATTGGACTTCATCACCCTT+TGG 0.414789 2:-3079869 None:intergenic
GGCGGTGAATGAATCGATTA+GGG 0.415824 2:+3073668 MsG0280006523.01.T01:CDS
GATTCTGATGATTCAGATAG+TGG 0.417094 2:+3079361 MsG0280006523.01.T01:CDS
GCAGCTCAGTCAGCGTATAT+CGG 0.418294 2:+3079808 MsG0280006523.01.T01:CDS
ACACAAAGCTAGCACAAAAC+TGG 0.421179 2:-3079569 None:intergenic
CTGGGCCGCCTATTCGCATA+TGG 0.421484 2:+3075034 MsG0280006523.01.T01:CDS
GGAAGTTCAGAAGGCTTATG+AGG 0.421556 2:+3073725 MsG0280006523.01.T01:CDS
TCCTTCAGTTTCTCTCTCTC+CGG 0.422379 2:+3076947 MsG0280006523.01.T01:CDS
TGGGTTATAGAATCTCTTCC+TGG 0.424403 2:+3076611 MsG0280006523.01.T01:CDS
GGAGTTTGAACAACAAAAGT+TGG 0.427677 2:-3079477 None:intergenic
AAGGCAGCTGATTTCTTTGA+GGG 0.429594 2:-3079971 None:intergenic
AATCTCTTTACCTCTTTACT+CGG 0.431970 2:-3080604 None:intergenic
CCAAAGCACCATATGCGAAT+AGG 0.434100 2:-3075042 None:intergenic
TTGTGGTTCACACATACAAT+TGG 0.434564 2:-3079610 None:intergenic
ATCGACACTTGAATCTCTCT+TGG 0.440706 2:+3079892 MsG0280006523.01.T01:CDS
TATTGTGTGGAGTTTCATAT+TGG 0.440824 2:+3073627 MsG0280006523.01.T01:CDS
CAAGCTGAGACTGGTGAAAC+AGG 0.441508 2:+3079265 MsG0280006523.01.T01:CDS
AAAGAGAAGAAAAGTCAGTC+TGG 0.445191 2:+3079436 MsG0280006523.01.T01:CDS
GACAAATATGCCGAGCAAAC+AGG 0.445834 2:+3080389 MsG0280006523.01.T01:three_prime_UTR
GGAAGTAACTTCATCAATGA+AGG 0.447215 2:+3074902 MsG0280006523.01.T01:CDS
GTAGTTGAGGCAGATGAAAC+TGG 0.447442 2:+3079322 MsG0280006523.01.T01:CDS
TGGGGACTTATTTATGCCTT+CGG 0.447951 2:+3080693 MsG0280006523.01.T01:three_prime_UTR
GGTCTGTTCACTGCATCTCT+TGG 0.449608 2:+3076713 MsG0280006523.01.T01:CDS
TTCAAAATTCATTTAAGGTG+GGG 0.455724 2:+3080675 MsG0280006523.01.T01:three_prime_UTR
CAGCTCAGTCAGCGTATATC+GGG 0.458624 2:+3079809 MsG0280006523.01.T01:CDS
GTTGTTTGACTCTGATCTGA+AGG 0.458674 2:-3076509 None:intergenic
TGAAGTGACTTCATTTGAGT+TGG 0.462021 2:+3076739 MsG0280006523.01.T01:CDS
TTCAAACACTTGTCCAGTCC+AGG 0.462329 2:-3075636 None:intergenic
AAAATGAACCAGGACATATA+GGG 0.462437 2:+3080568 MsG0280006523.01.T01:three_prime_UTR
AAACCATTTATATCGGTTCA+AGG 0.467514 2:-3079990 None:intergenic
TATGGTGCTTTGGCTCGATC+AGG 0.468033 2:+3075052 MsG0280006523.01.T01:CDS
CGAGAAGTTACGAGTTCAAA+AGG 0.471599 2:+3076664 MsG0280006523.01.T01:CDS
ATTCTTCCCTTCACCACTCT+CGG 0.476182 2:-3080305 None:intergenic
CAAAAGAGTTGCTGTTATAG+TGG 0.477088 2:+3076332 MsG0280006523.01.T01:CDS
TGGATGATGATGCAATGTTC+AGG 0.478667 2:+3079386 MsG0280006523.01.T01:CDS
TTGAACAATCCTCTGCAGTT+CGG 0.481594 2:-3080078 None:intergenic
TTTGAATCTGCTGCAGAAGT+TGG 0.485016 2:+3075653 MsG0280006523.01.T01:CDS
CAAAGCATAAAATACCTCTC+TGG 0.487157 2:-3077030 None:intergenic
GGTCAAGGGATGGAGATTGA+TGG 0.487783 2:+3073750 MsG0280006523.01.T01:CDS
CTTCAAAATTCATTTAAGGT+GGG 0.488212 2:+3080674 MsG0280006523.01.T01:three_prime_UTR
GAGTTTGAACAACAAAAGTT+GGG 0.488558 2:-3079476 None:intergenic
ATGAAGTTTATGGCTGTTCA+GGG 0.491134 2:+3076692 MsG0280006523.01.T01:CDS
AACTTCATCAATGAAGGGTC+AGG 0.494749 2:+3074908 MsG0280006523.01.T01:CDS
TAAACAATTGTCAGATTGGG+TGG 0.495021 2:+3076296 MsG0280006523.01.T01:intron
CCATACATCAAAGAATTTGT+CGG 0.502813 2:+3075112 MsG0280006523.01.T01:CDS
CTGAATCATCAGAATCTTCA+GGG 0.505240 2:-3079354 None:intergenic
TGGTGTGTTTAAGGATTTAG+CGG 0.508774 2:+3073647 MsG0280006523.01.T01:CDS
TGTTATTGAAGCTCCTGGAC+TGG 0.511530 2:+3075623 MsG0280006523.01.T01:intron
TGAGGCAGATGAAACTGGTC+AGG 0.511569 2:+3079327 MsG0280006523.01.T01:CDS
AACTGAAGGAATATTGCATA+AGG 0.511631 2:-3076934 None:intergenic
GTCACCAACTCTTCATAGCA+TGG 0.515019 2:-3080369 None:intergenic
GCTTCAAAATTCATTTAAGG+TGG 0.515192 2:+3080673 MsG0280006523.01.T01:three_prime_UTR
TCAGAATTCCCATTAGTCCT+AGG 0.515926 2:-3076575 None:intergenic
TCAATGTTTAAGAAGATACT+TGG 0.516092 2:-3080478 None:intergenic
CAGGAAGACTTATCCATGAA+TGG 0.517068 2:+3075071 MsG0280006523.01.T01:CDS
GGAAGTAATGTATACTTGCC+TGG 0.517844 2:-3079538 None:intergenic
GAATGAATCGATTAGGGAAG+CGG 0.520234 2:+3073674 MsG0280006523.01.T01:CDS
AAGGCTTATGAGGGTGGTCA+AGG 0.520680 2:+3073735 MsG0280006523.01.T01:CDS
AGCAGCAACCCTATATGTCC+TGG 0.521464 2:-3080576 None:intergenic
TTTCCAGTTTCTTCAAACAA+AGG 0.525530 2:-3080547 None:intergenic
ATCTCTTTACCTCTTTACTC+GGG 0.526296 2:-3080603 None:intergenic
GCTGTTCGTAGATTGATTCG+AGG 0.527425 2:+3073843 MsG0280006523.01.T01:CDS
GACTTATTTATGCCTTCGGA+AGG 0.527759 2:+3080697 MsG0280006523.01.T01:three_prime_UTR
GTGAAACAGGTGAGAGCGAT+GGG 0.528108 2:+3079278 MsG0280006523.01.T01:CDS
TCACTAACTTCAGCAGTGTG+TGG 0.529673 2:-3079785 None:intergenic
GCTGCTTTGGAAACACAACT+TGG 0.530870 2:+3080515 MsG0280006523.01.T01:three_prime_UTR
ATGGAGATTGATGGTGATGG+TGG 0.533466 2:+3073759 MsG0280006523.01.T01:CDS
ACTAGCGGCGGCGGTAGTTG+TGG 0.534744 2:+3073585 MsG0280006523.01.T01:CDS
GAAATTGATCAAGCTGAGAC+TGG 0.535955 2:+3079256 MsG0280006523.01.T01:CDS
GAAGTGCCAAATCAGACTTT+CGG 0.537715 2:+3080233 MsG0280006523.01.T01:three_prime_UTR
TTCTGAAATAGGCTCTATTG+AGG 0.539258 2:+3076541 MsG0280006523.01.T01:CDS
ATGTTACACAGGTAAGCCTC+AGG 0.539889 2:+3079721 MsG0280006523.01.T01:intron
TTTAAGAATTTCAAAATACC+AGG 0.540401 2:-3076629 None:intergenic
ACAAATGGTGAATGAGTTGA+AGG 0.542466 2:+3073704 MsG0280006523.01.T01:CDS
TTGAGGATAAAGAATCTCCT+AGG 0.544287 2:+3076558 MsG0280006523.01.T01:CDS
TCTCCCATGCTATGAAGAGT+TGG 0.545503 2:+3080365 MsG0280006523.01.T01:three_prime_UTR
ATTAAAAGAAGACCATGGAT+TGG 0.545632 2:+3080175 MsG0280006523.01.T01:three_prime_UTR
GTGTGGGTTAACAAAGGCGC+GGG 0.547730 2:-3079768 None:intergenic
TGAGTTGAAGGAAGTTCAGA+AGG 0.548314 2:+3073716 MsG0280006523.01.T01:CDS
CGAAGCACTTGAATTGGTGA+TGG 0.548587 2:+3080261 MsG0280006523.01.T01:three_prime_UTR
CTAGCAACCGAGAGTGGTGA+AGG 0.552221 2:+3080298 MsG0280006523.01.T01:three_prime_UTR
AAAAGGAAGAATTTGGGCAA+AGG 0.552394 2:-3080016 None:intergenic
GAAGAAAATATTGAAAGCAA+AGG 0.555883 2:+3079841 MsG0280006523.01.T01:CDS
AGTAAAAGATTTGCAAGCAA+TGG 0.559584 2:+3076996 MsG0280006523.01.T01:CDS
CTGCTATTACCCGAGTAAAG+AGG 0.566987 2:+3080594 MsG0280006523.01.T01:three_prime_UTR
CATCCTCATCATCTAAAGAC+CGG 0.567250 2:-3076966 None:intergenic
TCACCAACTCTTCATAGCAT+GGG 0.569074 2:-3080368 None:intergenic
GGAAGCGGCGGTGAAACAAA+TGG 0.569612 2:+3073689 MsG0280006523.01.T01:CDS
CCTGCAAGACATCCAGATGC+GGG 0.573562 2:+3079175 MsG0280006523.01.T01:CDS
CACTAACTTCAGCAGTGTGT+GGG 0.580709 2:-3079784 None:intergenic
AACAATTACTCAGGAAGGAG+AGG 0.581483 2:-3075796 None:intergenic
ATACCTTCAAACAATTACTC+AGG 0.583544 2:-3075805 None:intergenic
CACCGATGGGATGGCTGATG+CGG 0.584940 2:+3079122 MsG0280006523.01.T01:CDS
GTAGATTCAACTAGCGGCGG+CGG 0.586586 2:+3073576 MsG0280006523.01.T01:CDS
AGTACCGCTTCCTATTTGCA+AGG 0.586680 2:-3075147 None:intergenic
TTGCGGAGTCCGAACTGCAG+AGG 0.587099 2:+3080069 MsG0280006523.01.T01:CDS
GGTGAAACAGGTGAGAGCGA+TGG 0.587248 2:+3079277 MsG0280006523.01.T01:CDS
GGATGAAGATAATGCCTTGG+AGG 0.589707 2:+3076484 MsG0280006523.01.T01:intron
TTATGAGGGTGGTCAAGGGA+TGG 0.589760 2:+3073740 MsG0280006523.01.T01:CDS
CGACTCTGAGTCTGTAGTTG+AGG 0.592639 2:+3079309 MsG0280006523.01.T01:CDS
GCTATACAGAAGCACAGCAA+TGG 0.593564 2:+3076354 MsG0280006523.01.T01:CDS
AATACAGCATGGCCAATCCA+TGG 0.594671 2:-3080187 None:intergenic
GTTGCCGAGTTCATATTGTG+TGG 0.597336 2:+3073614 MsG0280006523.01.T01:CDS
ACTCAGGAAGGAGAGGTGAT+CGG 0.597768 2:-3075789 None:intergenic
TTCTTAAACATTGACTCCTG+AGG 0.598037 2:+3080487 MsG0280006523.01.T01:three_prime_UTR
AAAGCAAAGGATCATCCAAA+GGG 0.598470 2:+3079854 MsG0280006523.01.T01:CDS
GAAAGCAAAGGATCATCCAA+AGG 0.599025 2:+3079853 MsG0280006523.01.T01:CDS
ATTCTGATGATTCAGATAGT+GGG 0.599068 2:+3079362 MsG0280006523.01.T01:CDS
CTTCAAACAATTACTCAGGA+AGG 0.602501 2:-3075801 None:intergenic
AAACAATTGTCAGATTGGGT+GGG 0.602741 2:+3076297 MsG0280006523.01.T01:intron
TCTCCCTTGCAAATAGGAAG+CGG 0.604277 2:+3075143 MsG0280006523.01.T01:CDS
TGGTGCTATCGACAAAATCA+GGG 0.605594 2:+3074845 MsG0280006523.01.T01:CDS
GAAGTAACTTCATCAATGAA+GGG 0.606468 2:+3074903 MsG0280006523.01.T01:CDS
TTGAGTTACTAGTAAAAGGG+TGG 0.606996 2:+3080804 MsG0280006523.01.T01:three_prime_UTR
CGAACAGCATATCGAACAGA+AGG 0.607154 2:-3073828 None:intergenic
TTTCCAATAATGAAAGGATG+CGG 0.608175 2:-3079498 None:intergenic
TCTCCGGTCTTTAGATGATG+AGG 0.608454 2:+3076963 MsG0280006523.01.T01:CDS
AAGTCACTAGCAACCGAGAG+TGG 0.609058 2:+3080292 MsG0280006523.01.T01:three_prime_UTR
TGTGGATGAAGATAATGCCT+TGG 0.609887 2:+3076481 MsG0280006523.01.T01:intron
CAATGATATCACCGATGGGA+TGG 0.611740 2:+3079113 MsG0280006523.01.T01:CDS
GGGATGGAGATTGATGGTGA+TGG 0.613191 2:+3073756 MsG0280006523.01.T01:CDS
GTACCGCTTCCTATTTGCAA+GGG 0.614801 2:-3075146 None:intergenic
CTGATCTGAAGGTTCCTCCA+AGG 0.616326 2:-3076498 None:intergenic
ACCTGCAAGACATCCAGATG+CGG 0.618983 2:+3079174 MsG0280006523.01.T01:CDS
AGTACGTAAGTTCTGTGTCA+AGG 0.622191 2:+3080425 MsG0280006523.01.T01:three_prime_UTR
ATCCGCATCAGCCATCCCAT+CGG 0.628237 2:-3079124 None:intergenic
AGGCTTATGAGGGTGGTCAA+GGG 0.628293 2:+3073736 MsG0280006523.01.T01:CDS
GTTCAGAAGGCTTATGAGGG+TGG 0.630689 2:+3073729 MsG0280006523.01.T01:CDS
GAAATATTAAAAGAAGACCA+TGG 0.630859 2:+3080170 MsG0280006523.01.T01:three_prime_UTR
AACTCCACACAATATGAACT+CGG 0.631950 2:-3073618 None:intergenic
GAAGTTCAGAAGGCTTATGA+GGG 0.633937 2:+3073726 MsG0280006523.01.T01:CDS
TGATGATGCAATGTTCAGGA+TGG 0.635467 2:+3079390 MsG0280006523.01.T01:CDS
AAGCACCATATGCGAATAGG+CGG 0.636479 2:-3075039 None:intergenic
GAACTCGTAACTTCTCGTCG+TGG 0.643517 2:-3076658 None:intergenic
GTGAACACGAGGCTGACAGA+AGG 0.648318 2:-3075923 None:intergenic
ACCGGAGAGAGAGAAACTGA+AGG 0.652358 2:-3076948 None:intergenic
TGTGTGGGTTAACAAAGGCG+CGG 0.654635 2:-3079769 None:intergenic
AGCAGTGTGTGGGTTAACAA+AGG 0.655045 2:-3079774 None:intergenic
TAGCAACCGAGAGTGGTGAA+GGG 0.660003 2:+3080299 MsG0280006523.01.T01:three_prime_UTR
GTTTAAGAAGATACTTGGTG+AGG 0.662668 2:-3080473 None:intergenic
AAATAAAGCCAAATACAGCA+TGG 0.665895 2:-3080198 None:intergenic
TGATGATTCAGATAGTGGGA+TGG 0.668681 2:+3079366 MsG0280006523.01.T01:CDS
GGCCAAACACTGTGAACACG+AGG 0.670920 2:-3075934 None:intergenic
TGAATCGATTAGGGAAGCGG+CGG 0.676427 2:+3073677 MsG0280006523.01.T01:CDS
TTTGCAATGATATCACCGAT+GGG 0.676657 2:+3079109 MsG0280006523.01.T01:CDS
TGTGTTTAAGGATTTAGCGG+CGG 0.680588 2:+3073650 MsG0280006523.01.T01:CDS
AGCACAAAACTGGTAAACGA+CGG 0.681663 2:-3079559 None:intergenic
ATGTTGGTAGATTCAACTAG+CGG 0.687387 2:+3073570 MsG0280006523.01.T01:CDS
CAGGAAGGAGAGGTGATCGG+CGG 0.689005 2:-3075786 None:intergenic
GAGTACACAGTAAGAACCTG+AGG 0.695385 2:-3079737 None:intergenic
TTGGTAGATTCAACTAGCGG+CGG 0.734446 2:+3073573 MsG0280006523.01.T01:CDS
TGGAAGCTACATATCCAGAG+AGG 0.741533 2:+3077016 MsG0280006523.01.T01:CDS
AATCATCAGAATCTTCAGGG+TGG 0.753774 2:-3079351 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACAAATAATAATAAACAAT+AGG - Chr2:3075576-3075595 None:intergenic 10.0%
!!! ATTATTTTAGCTTTTATTAT+TGG + Chr2:3074525-3074544 MsG0280006523.01.T01:intron 10.0%
!!! TTTTTTATATACCATTTTAA+GGG - Chr2:3078343-3078362 None:intergenic 10.0%
!!! TTTTTTTATATACCATTTTA+AGG - Chr2:3078344-3078363 None:intergenic 10.0%
!! ATAAGAATATTTATCAAAAC+AGG - Chr2:3075958-3075977 None:intergenic 15.0%
!! TGCTTATAATATAAATGTTT+AGG - Chr2:3074562-3074581 None:intergenic 15.0%
!! TTAAAAAGATTTAGATATGA+AGG - Chr2:3079681-3079700 None:intergenic 15.0%
!!! AAAAACATTTTTAAGAATGT+AGG - Chr2:3075345-3075364 None:intergenic 15.0%
!!! TATCTAAATCTTTTTAACAT+TGG + Chr2:3079684-3079703 MsG0280006523.01.T01:intron 15.0%
!!! TATTTTTGGTGATAAAAATA+GGG - Chr2:3075542-3075561 None:intergenic 15.0%
!!! TGCAACATTTTTTTTTTATT+TGG + Chr2:3074649-3074668 MsG0280006523.01.T01:intron 15.0%
!!! TTCAACATTTTAAATAATAG+AGG + Chr2:3077134-3077153 MsG0280006523.01.T01:intron 15.0%
!!! TTTTGTGAAATTATTATTGA+AGG + Chr2:3076094-3076113 MsG0280006523.01.T01:intron 15.0%
!!! TTTTTTTTTTGTAATTTACC+TGG + Chr2:3078876-3078895 MsG0280006523.01.T01:intron 15.0%
!! AAAGGAAATAATGAAGTTTA+TGG + Chr2:3076682-3076701 MsG0280006523.01.T01:CDS 20.0%
!! AATTTACACTACTTTCAATT+GGG - Chr2:3078477-3078496 None:intergenic 20.0%
!! ACAATAACAATACAAAACAA+AGG - Chr2:3073952-3073971 None:intergenic 20.0%
!! CAAAAATTTCCAATAATGAA+AGG - Chr2:3079507-3079526 None:intergenic 20.0%
!! CAAGTATAAAATTATTGAGA+CGG - Chr2:3075185-3075204 None:intergenic 20.0%
!! TAAAATAAGTTAACAACACA+CGG - Chr2:3074743-3074762 None:intergenic 20.0%
!! TAGAGTTTATGTGAAAATAT+TGG + Chr2:3074500-3074519 MsG0280006523.01.T01:intron 20.0%
!! TTTAAGAATTTCAAAATACC+AGG - Chr2:3076632-3076651 None:intergenic 20.0%
!! TTTGATACTTTCAAAATGTT+TGG + Chr2:3077378-3077397 MsG0280006523.01.T01:intron 20.0%
!!! AAGTTCTCCAAAATATTTTA+TGG - Chr2:3074349-3074368 None:intergenic 20.0%
!!! AATTTTATACTTGGTTGAAA+AGG + Chr2:3075192-3075211 MsG0280006523.01.T01:intron 20.0%
!!! ATTTTGAGTTACTAGTAAAA+GGG + Chr2:3080801-3080820 MsG0280006523.01.T01:three_prime_UTR 20.0%
!!! CTATTTTTGGTGATAAAAAT+AGG - Chr2:3075543-3075562 None:intergenic 20.0%
!!! GTATTGTTATTGTAGTTTTA+GGG + Chr2:3073959-3073978 MsG0280006523.01.T01:intron 20.0%
!!! GTTGTTTCCATAAAATATTT+TGG + Chr2:3074339-3074358 MsG0280006523.01.T01:intron 20.0%
!!! TATTTTGAAATTCTTAAAGC+TGG + Chr2:3076634-3076653 MsG0280006523.01.T01:CDS 20.0%
!!! TCAAATTTTCCAGAAAATAT+TGG + Chr2:3080097-3080116 MsG0280006523.01.T01:CDS 20.0%
!!! TGTATTGTTATTGTAGTTTT+AGG + Chr2:3073958-3073977 MsG0280006523.01.T01:intron 20.0%
!!! TTCATTTCATAAGCTATTTT+TGG + Chr2:3074177-3074196 MsG0280006523.01.T01:intron 20.0%
!!! TTTTATAATTAGGGTATGTT+TGG + Chr2:3074070-3074089 MsG0280006523.01.T01:intron 20.0%
! AAAATCCAAAAGGAAGAATT+TGG - Chr2:3080026-3080045 None:intergenic 25.0%
! AAATCCAAAAGGAAGAATTT+GGG - Chr2:3080025-3080044 None:intergenic 25.0%
! AAATCTATTTATCCACTTTG+TGG - Chr2:3079630-3079649 None:intergenic 25.0%
! AAGGAAGAAACCATTTATAT+CGG - Chr2:3080000-3080019 None:intergenic 25.0%
! AATAAACAGAACCCTTAAAA+TGG + Chr2:3078329-3078348 MsG0280006523.01.T01:intron 25.0%
! ACAAAAACACATTATTCGTT+AGG - Chr2:3078505-3078524 None:intergenic 25.0%
! ACTATTAGAATTTAGGCTTA+TGG + Chr2:3077267-3077286 MsG0280006523.01.T01:intron 25.0%
! AGATGATTAAGTCTTCTAAA+TGG - Chr2:3079004-3079023 None:intergenic 25.0%
! AGGAACTTTAATTGAATGAA+AGG + Chr2:3078803-3078822 MsG0280006523.01.T01:intron 25.0%
! ATAAATCTACTACGAGTTTA+AGG - Chr2:3074881-3074900 None:intergenic 25.0%
! ATAACTAAAGAGCTTCAATT+AGG - Chr2:3078543-3078562 None:intergenic 25.0%
! ATTTCTTGTCATCTAGAAAA+AGG + Chr2:3078697-3078716 MsG0280006523.01.T01:intron 25.0%
! CAAAAACACATTATTCGTTA+GGG - Chr2:3078504-3078523 None:intergenic 25.0%
! GAAATATTAAAAGAAGACCA+TGG + Chr2:3080170-3080189 MsG0280006523.01.T01:three_prime_UTR 25.0%
! GAAGAAAATATTGAAAGCAA+AGG + Chr2:3079841-3079860 MsG0280006523.01.T01:CDS 25.0%
! GAAGCTTCAAAATTCATTTA+AGG + Chr2:3080670-3080689 MsG0280006523.01.T01:three_prime_UTR 25.0%
! GAATTTACACTACTTTCAAT+TGG - Chr2:3078478-3078497 None:intergenic 25.0%
! TAAACTCGTAGTAGATTTAT+TGG + Chr2:3074881-3074900 MsG0280006523.01.T01:CDS 25.0%
! TAATTGAAGCTCTTTAGTTA+TGG + Chr2:3078542-3078561 MsG0280006523.01.T01:intron 25.0%
! TCAATGTTTAAGAAGATACT+TGG - Chr2:3080481-3080500 None:intergenic 25.0%
! TCTTAAACAATTGTCAGATT+GGG + Chr2:3076293-3076312 MsG0280006523.01.T01:intron 25.0%
! TTATACAAATAAGCTCTCTA+GGG + Chr2:3074201-3074220 MsG0280006523.01.T01:intron 25.0%
! TTCTTAAACAATTGTCAGAT+TGG + Chr2:3076292-3076311 MsG0280006523.01.T01:intron 25.0%
! TTTGTATTCTTCAATTGTCA+AGG - Chr2:3077421-3077440 None:intergenic 25.0%
!! AATAATCCACCAATATTTTC+TGG - Chr2:3080109-3080128 None:intergenic 25.0%
!! AATGCTGGATTATTATGTTT+TGG + Chr2:3074943-3074962 MsG0280006523.01.T01:intron 25.0%
!! AATTTTCCAGAAAATATTGG+TGG + Chr2:3080100-3080119 MsG0280006523.01.T01:CDS 25.0%
!! AGGCTTGAAATAACTATTTT+TGG - Chr2:3075556-3075575 None:intergenic 25.0%
!! ATGCTGGATTATTATGTTTT+GGG + Chr2:3074944-3074963 MsG0280006523.01.T01:intron 25.0%
!! ATTTTTGTTCATGAAAATCC+AGG + Chr2:3079520-3079539 MsG0280006523.01.T01:CDS 25.0%
!! CGTCTCAATAATTTTATACT+TGG + Chr2:3075183-3075202 MsG0280006523.01.T01:intron 25.0%
!! CTTCAAAATTCATTTAAGGT+GGG + Chr2:3080674-3080693 MsG0280006523.01.T01:three_prime_UTR 25.0%
!! GACAATTTTCAAAATCCAAA+AGG - Chr2:3080036-3080055 None:intergenic 25.0%
!! GGAAATTAACTAATTTTCAC+TGG + Chr2:3073980-3073999 MsG0280006523.01.T01:intron 25.0%
!! TTCAAAATTCATTTAAGGTG+GGG + Chr2:3080675-3080694 MsG0280006523.01.T01:three_prime_UTR 25.0%
!! TTTGAATAAAAAGCATGCAA+CGG - Chr2:3076445-3076464 None:intergenic 25.0%
!!! ACTTTAAAATGTTCATGAAG+CGG - Chr2:3078593-3078612 None:intergenic 25.0%
!!! CATTTTGAGTTACTAGTAAA+AGG + Chr2:3080800-3080819 MsG0280006523.01.T01:three_prime_UTR 25.0%
!!! GTATTGGTTATAGAAAGAAA+TGG + Chr2:3075866-3075885 MsG0280006523.01.T01:intron 25.0%
!!! TGGTGCTTGTTTTATAATTA+GGG + Chr2:3074061-3074080 MsG0280006523.01.T01:CDS 25.0%
!!! TTTTTTACTGTGACGTTAAT+TGG + Chr2:3077311-3077330 MsG0280006523.01.T01:intron 25.0%
AAAAAATTGGTAGAGCTGAA+CGG - Chr2:3075764-3075783 None:intergenic 30.0%
AAAAATGAACCAGGACATAT+AGG + Chr2:3080567-3080586 MsG0280006523.01.T01:three_prime_UTR 30.0%
AAAATGAACCAGGACATATA+GGG + Chr2:3080568-3080587 MsG0280006523.01.T01:three_prime_UTR 30.0%
AAAGAAACAGAGTAAATCAG+TGG + Chr2:3077544-3077563 MsG0280006523.01.T01:intron 30.0%
AAATAAAGCCAAATACAGCA+TGG - Chr2:3080201-3080220 None:intergenic 30.0%
AAATTTGATGAACCTGTTTG+TGG + Chr2:3076463-3076482 MsG0280006523.01.T01:intron 30.0%
AACACATGGCTATATAAAGT+TGG + Chr2:3076261-3076280 MsG0280006523.01.T01:intron 30.0%
AACTAGCATCAAAACCATTT+AGG + Chr2:3079927-3079946 MsG0280006523.01.T01:CDS 30.0%
AACTGAAGGAATATTGCATA+AGG - Chr2:3076937-3076956 None:intergenic 30.0%
AATACAGAAATACACACATC+AGG - Chr2:3077730-3077749 None:intergenic 30.0%
AATCTATCTCATATAACACC+AGG - Chr2:3078897-3078916 None:intergenic 30.0%
AATCTCTTTACCTCTTTACT+CGG - Chr2:3080607-3080626 None:intergenic 30.0%
AATTAGGGTATGTTTGGATT+TGG + Chr2:3074076-3074095 MsG0280006523.01.T01:intron 30.0%
AGTAAAAGATTTGCAAGCAA+TGG + Chr2:3076996-3077015 MsG0280006523.01.T01:CDS 30.0%
ATAAGCTGTTTATCCAAACA+AGG - Chr2:3074228-3074247 None:intergenic 30.0%
ATACAGAAATACACACATCA+GGG - Chr2:3077729-3077748 None:intergenic 30.0%
ATACCTTCAAACAATTACTC+AGG - Chr2:3075808-3075827 None:intergenic 30.0%
ATCTCATTGGAACTTAAAAC+TGG - Chr2:3077100-3077119 None:intergenic 30.0%
ATGAAACATGATCATGATTC+AGG - Chr2:3074711-3074730 None:intergenic 30.0%
ATTAAAAGAAGACCATGGAT+TGG + Chr2:3080175-3080194 MsG0280006523.01.T01:three_prime_UTR 30.0%
ATTAAAGGAGTTAAAGGTCT+AGG - Chr2:3077671-3077690 None:intergenic 30.0%
ATTCTGATGATTCAGATAGT+GGG + Chr2:3079362-3079381 MsG0280006523.01.T01:CDS 30.0%
ATTTAGCTGTTTATCCAAAC+AGG + Chr2:3074601-3074620 MsG0280006523.01.T01:intron 30.0%
CCATACATCAAAGAATTTGT+CGG + Chr2:3075112-3075131 MsG0280006523.01.T01:CDS 30.0%
CTTATACAAATAAGCTCTCT+AGG + Chr2:3074200-3074219 MsG0280006523.01.T01:intron 30.0%
GAAAATTTGACTGTATCACA+AGG + Chr2:3076376-3076395 MsG0280006523.01.T01:intron 30.0%
GAAGTAACTTCATCAATGAA+GGG + Chr2:3074903-3074922 MsG0280006523.01.T01:CDS 30.0%
GAGTTTGAACAACAAAAGTT+GGG - Chr2:3079479-3079498 None:intergenic 30.0%
GCTTCAAAATTCATTTAAGG+TGG + Chr2:3080673-3080692 MsG0280006523.01.T01:three_prime_UTR 30.0%
GGGACTAACTATTAGAATTT+AGG + Chr2:3077260-3077279 MsG0280006523.01.T01:intron 30.0%
GTTTCATATTGGTGTGTTTA+AGG + Chr2:3073638-3073657 MsG0280006523.01.T01:CDS 30.0%
TAAACTCAATCCTTCTTTGT+TGG + Chr2:3078968-3078987 MsG0280006523.01.T01:intron 30.0%
TAAGCTGTTTATCCAAACAA+GGG - Chr2:3074227-3074246 None:intergenic 30.0%
TACCACCTAAGTATAGAAAT+TGG - Chr2:3074007-3074026 None:intergenic 30.0%
TATAAAATTATTGAGACGGC+AGG - Chr2:3075181-3075200 None:intergenic 30.0%
TATTGTGTGGAGTTTCATAT+TGG + Chr2:3073627-3073646 MsG0280006523.01.T01:CDS 30.0%
TCAAATAAGCCAATCTAAAC+AGG + Chr2:3074452-3074471 MsG0280006523.01.T01:intron 30.0%
TCTTTAGTTATGGAGGTAAT+TGG + Chr2:3078552-3078571 MsG0280006523.01.T01:intron 30.0%
TGACAGATACTACTTTGTAT+TGG + Chr2:3075850-3075869 MsG0280006523.01.T01:intron 30.0%
TGTATTCATTGTGAAATTGC+AGG + Chr2:3074994-3075013 MsG0280006523.01.T01:intron 30.0%
TTAAAGGAGTTAAAGGTCTA+GGG - Chr2:3077670-3077689 None:intergenic 30.0%
TTGAAGCTGAGAAAAATGAT+GGG + Chr2:3073790-3073809 MsG0280006523.01.T01:CDS 30.0%
TTGGAACTTAAAACTGGAAA+AGG - Chr2:3077094-3077113 None:intergenic 30.0%
TTTAGCTGTTTATCCAAACA+GGG + Chr2:3074602-3074621 MsG0280006523.01.T01:intron 30.0%
TTTATATAGCCATGTGTTGT+TGG - Chr2:3076259-3076278 None:intergenic 30.0%
TTTCCAATAATGAAAGGATG+CGG - Chr2:3079501-3079520 None:intergenic 30.0%
TTTCCAGTTTCTTCAAACAA+AGG - Chr2:3080550-3080569 None:intergenic 30.0%
! ATTCCTTTGTTTGAAGAAAC+TGG + Chr2:3080544-3080563 MsG0280006523.01.T01:three_prime_UTR 30.0%
! CATTTGATAATTGCTGAACT+TGG + Chr2:3075471-3075490 MsG0280006523.01.T01:intron 30.0%
! CTTTGTTCTTTTTGTTGATC+AGG - Chr2:3077528-3077547 None:intergenic 30.0%
! TTGAATAAAAAGCATGCAAC+GGG - Chr2:3076444-3076463 None:intergenic 30.0%
! TTTTATCATTGCTCCATTCA+TGG - Chr2:3075087-3075106 None:intergenic 30.0%
!! AAACCATTTATATCGGTTCA+AGG - Chr2:3079993-3080012 None:intergenic 30.0%
!! ACAGACGAAAATTCTGAAAT+AGG + Chr2:3076530-3076549 MsG0280006523.01.T01:CDS 30.0%
!! AGCTTACATAGCTATTTCTA+TGG + Chr2:3074278-3074297 MsG0280006523.01.T01:intron 30.0%
!! ATTCTGACTTTTTGAAGAGT+TGG + Chr2:3076591-3076610 MsG0280006523.01.T01:CDS 30.0%
!! CTTTAAAATGTTCATGAAGC+GGG - Chr2:3078592-3078611 None:intergenic 30.0%
!! TTCTGACTTTTTGAAGAGTT+GGG + Chr2:3076592-3076611 MsG0280006523.01.T01:CDS 30.0%
!!! GATTGGCTTTGGATTTTAAT+AGG + Chr2:3075293-3075312 MsG0280006523.01.T01:intron 30.0%
!!! GTGGTGCTTGTTTTATAATT+AGG + Chr2:3074060-3074079 MsG0280006523.01.T01:CDS 30.0%
!!! TGAGTTCGATTTTTTCCTTT+TGG + Chr2:3078445-3078464 MsG0280006523.01.T01:intron 30.0%
!!! TGCTGTATTTGGCTTTATTT+TGG + Chr2:3080201-3080220 MsG0280006523.01.T01:three_prime_UTR 30.0%
!!! TGTCGATTCAAGAAATTTTG+CGG + Chr2:3080052-3080071 MsG0280006523.01.T01:CDS 30.0%
!!! TTATGTTTTGGGAAAATCGT+CGG + Chr2:3074955-3074974 MsG0280006523.01.T01:intron 30.0%
AAAAATGTTGCAACAAGCCT+TGG - Chr2:3074641-3074660 None:intergenic 35.0%
AAAAGGAAGAATTTGGGCAA+AGG - Chr2:3080019-3080038 None:intergenic 35.0%
AAACAATTGTCAGATTGGGT+GGG + Chr2:3076297-3076316 MsG0280006523.01.T01:intron 35.0%
AAAGAATCTCCTAGGACTAA+TGG + Chr2:3076566-3076585 MsG0280006523.01.T01:CDS 35.0%
AAAGAGAAGAAAAGTCAGTC+TGG + Chr2:3079436-3079455 MsG0280006523.01.T01:CDS 35.0%
AAAGCAAAGGATCATCCAAA+GGG + Chr2:3079854-3079873 MsG0280006523.01.T01:CDS 35.0%
AACTCCACACAATATGAACT+CGG - Chr2:3073621-3073640 None:intergenic 35.0%
AAGAATCTCCTAGGACTAAT+GGG + Chr2:3076567-3076586 MsG0280006523.01.T01:CDS 35.0%
AAGTTAGCATCTCTGTATGT+AGG + Chr2:3079074-3079093 MsG0280006523.01.T01:intron 35.0%
AATCATGTTATTGAAGCTCC+TGG + Chr2:3075618-3075637 MsG0280006523.01.T01:intron 35.0%
AATGAAGTTTATGGCTGTTC+AGG + Chr2:3076691-3076710 MsG0280006523.01.T01:CDS 35.0%
ACAAGAACATCCATCAATTC+AGG - Chr2:3078059-3078078 None:intergenic 35.0%
AGAAACTGGAAAAATGAACC+AGG + Chr2:3080558-3080577 MsG0280006523.01.T01:three_prime_UTR 35.0%
AGGGCTTATGGAAACAATTA+TGG + Chr2:3074150-3074169 MsG0280006523.01.T01:intron 35.0%
ATCCACTTTCTTGTCTGAAA+TGG + Chr2:3077486-3077505 MsG0280006523.01.T01:intron 35.0%
ATCCATTTCAGACAAGAAAG+TGG - Chr2:3077491-3077510 None:intergenic 35.0%
ATCTCTTTACCTCTTTACTC+GGG - Chr2:3080606-3080625 None:intergenic 35.0%
ATGAAGTTTATGGCTGTTCA+GGG + Chr2:3076692-3076711 MsG0280006523.01.T01:CDS 35.0%
ATGTTGTCTTGATGTTACAC+AGG + Chr2:3079710-3079729 MsG0280006523.01.T01:intron 35.0%
CAAAGCATAAAATACCTCTC+TGG - Chr2:3077033-3077052 None:intergenic 35.0%
CATTATCTTCATCCACAAAC+AGG - Chr2:3076478-3076497 None:intergenic 35.0%
CCGACAAATTCTTTGATGTA+TGG - Chr2:3075115-3075134 None:intergenic 35.0%
CTGAATCATCAGAATCTTCA+GGG - Chr2:3079357-3079376 None:intergenic 35.0%
CTGGTCCAATTTCTATACTT+AGG + Chr2:3073999-3074018 MsG0280006523.01.T01:intron 35.0%
CTGTCTTCATAAGCTATTCT+AGG - Chr2:3074478-3074497 None:intergenic 35.0%
CTTCAAACAATTACTCAGGA+AGG - Chr2:3075804-3075823 None:intergenic 35.0%
CTTCCTGAGTAATTGTTTGA+AGG + Chr2:3075802-3075821 MsG0280006523.01.T01:CDS 35.0%
CTTGAAGCTGAGAAAAATGA+TGG + Chr2:3073789-3073808 MsG0280006523.01.T01:CDS 35.0%
GAAGCAAAAGATTGTCTTCT+GGG + Chr2:3075016-3075035 MsG0280006523.01.T01:CDS 35.0%
GATGCTTATGTTTATCTCTG+CGG + Chr2:3077817-3077836 MsG0280006523.01.T01:intron 35.0%
GATTCTGATGATTCAGATAG+TGG + Chr2:3079361-3079380 MsG0280006523.01.T01:CDS 35.0%
GGAAGTAACTTCATCAATGA+AGG + Chr2:3074902-3074921 MsG0280006523.01.T01:CDS 35.0%
GGAGTTTGAACAACAAAAGT+TGG - Chr2:3079480-3079499 None:intergenic 35.0%
GGTTGTATATCTTATGCAGA+AGG + Chr2:3075213-3075232 MsG0280006523.01.T01:intron 35.0%
GTAGTATCTGTCATGAATAG+AGG - Chr2:3075843-3075862 None:intergenic 35.0%
GTCCAATTTCTATACTTAGG+TGG + Chr2:3074002-3074021 MsG0280006523.01.T01:intron 35.0%
GTTATACCTGTATGCCAATA+TGG + Chr2:3078220-3078239 MsG0280006523.01.T01:intron 35.0%
TAAAACACTAAGACCCTGTT+TGG - Chr2:3074618-3074637 None:intergenic 35.0%
TAAACAATTGTCAGATTGGG+TGG + Chr2:3076296-3076315 MsG0280006523.01.T01:intron 35.0%
TACTATCAACCAACAACACA+TGG + Chr2:3076247-3076266 MsG0280006523.01.T01:intron 35.0%
TACTTATCTCCCTTGCAAAT+AGG + Chr2:3075137-3075156 MsG0280006523.01.T01:CDS 35.0%
TAGGGGATTAAAGGAGTTAA+AGG - Chr2:3077677-3077696 None:intergenic 35.0%
TATTCTAGGCCTGTTTAGAT+TGG - Chr2:3074464-3074483 None:intergenic 35.0%
TCTACAGACAGTTCCATTTA+TGG + Chr2:3075722-3075741 MsG0280006523.01.T01:CDS 35.0%
TCTGAATCATCAGAATCTTC+AGG - Chr2:3079358-3079377 None:intergenic 35.0%
TCTTACTGTGTACTCACATT+TGG + Chr2:3079745-3079764 MsG0280006523.01.T01:CDS 35.0%
TGAAGTGACTTCATTTGAGT+TGG + Chr2:3076739-3076758 MsG0280006523.01.T01:CDS 35.0%
TGGTGTGTTTAAGGATTTAG+CGG + Chr2:3073647-3073666 MsG0280006523.01.T01:CDS 35.0%
TTAAAACTGGAAAAGGAACG+CGG - Chr2:3077087-3077106 None:intergenic 35.0%
TTGAAGCTCTTTAGTTATGG+AGG + Chr2:3078545-3078564 MsG0280006523.01.T01:intron 35.0%
TTGAGGATAAAGAATCTCCT+AGG + Chr2:3076558-3076577 MsG0280006523.01.T01:CDS 35.0%
TTGAGTTACTAGTAAAAGGG+TGG + Chr2:3080804-3080823 MsG0280006523.01.T01:three_prime_UTR 35.0%
TTGTGGTTCACACATACAAT+TGG - Chr2:3079613-3079632 None:intergenic 35.0%
TTGTTGGCAAATGCTCATAA+GGG + Chr2:3076834-3076853 MsG0280006523.01.T01:intron 35.0%
TTTGCAATGATATCACCGAT+GGG + Chr2:3079109-3079128 MsG0280006523.01.T01:CDS 35.0%
! AACTTTGTTTGACAGACAAC+TGG - Chr2:3076208-3076227 None:intergenic 35.0%
! ACAAATGGTGAATGAGTTGA+AGG + Chr2:3073704-3073723 MsG0280006523.01.T01:CDS 35.0%
! ATGTTGGTAGATTCAACTAG+CGG + Chr2:3073570-3073589 MsG0280006523.01.T01:CDS 35.0%
! CAAAAGAGTTGCTGTTATAG+TGG + Chr2:3076332-3076351 MsG0280006523.01.T01:CDS 35.0%
! CTAGGTTTAACACTTTTAGC+TGG + Chr2:3074825-3074844 MsG0280006523.01.T01:CDS 35.0%
! CTATCATTTTCATAGTCTCG+AGG + Chr2:3078376-3078395 MsG0280006523.01.T01:intron 35.0%
! GTTTAAGAAGATACTTGGTG+AGG - Chr2:3080476-3080495 None:intergenic 35.0%
! TAGGGTTTGAATTCTGGAAA+GGG - Chr2:3077652-3077671 None:intergenic 35.0%
! TGAATTGATGGATGTTCTTG+TGG + Chr2:3078058-3078077 MsG0280006523.01.T01:intron 35.0%
! TGGTAGTAGTTTGCCATAAA+TGG - Chr2:3075738-3075757 None:intergenic 35.0%
! TTTGCCCAAATTCTTCCTTT+TGG + Chr2:3080018-3080037 MsG0280006523.01.T01:CDS 35.0%
! TTTTGCAATGATATCACCGA+TGG + Chr2:3079108-3079127 MsG0280006523.01.T01:CDS 35.0%
!! GAGATTCAAGTGTCGATAAT+TGG - Chr2:3079889-3079908 None:intergenic 35.0%
!! TGGTTGATAGTATATCCATC+AGG - Chr2:3076239-3076258 None:intergenic 35.0%
!! TTAAAGTGCCTTTTCCCATA+AGG + Chr2:3078606-3078625 MsG0280006523.01.T01:intron 35.0%
!! TTCTGAAATAGGCTCTATTG+AGG + Chr2:3076541-3076560 MsG0280006523.01.T01:CDS 35.0%
!! TTCTTAAACATTGACTCCTG+AGG + Chr2:3080487-3080506 MsG0280006523.01.T01:three_prime_UTR 35.0%
!! TTTGAGTTGGACGAGAATTT+AGG + Chr2:3076752-3076771 MsG0280006523.01.T01:CDS 35.0%
!!! CAGAGAGGTATTTTATGCTT+TGG + Chr2:3077031-3077050 MsG0280006523.01.T01:intron 35.0%
!!! TCTCTCGAACTTTTAAAGCA+AGG - Chr2:3075697-3075716 None:intergenic 35.0%
AAAGCCAATCACACCATAGT+GGG - Chr2:3075283-3075302 None:intergenic 40.0%
AAAGTGGATCACAAACCATG+TGG - Chr2:3077475-3077494 None:intergenic 40.0%
AAATACACACATCAGGGTGT+TGG - Chr2:3077723-3077742 None:intergenic 40.0%
AACAATTACTCAGGAAGGAG+AGG - Chr2:3075799-3075818 None:intergenic 40.0%
AACTTCATCAATGAAGGGTC+AGG + Chr2:3074908-3074927 MsG0280006523.01.T01:CDS 40.0%
AAGTACGAACCCAGATCATT+AGG - Chr2:3076897-3076916 None:intergenic 40.0%
AATCATCAGAATCTTCAGGG+TGG - Chr2:3079354-3079373 None:intergenic 40.0%
AATCCAAATCGAGGAGTTGT+AGG - Chr2:3077239-3077258 None:intergenic 40.0%
AATTGGACTTCATCACCCTT+TGG - Chr2:3079872-3079891 None:intergenic 40.0%
ACACAAAGCTAGCACAAAAC+TGG - Chr2:3079572-3079591 None:intergenic 40.0%
ACCAAAAATTCACCTTCCGA+AGG - Chr2:3080712-3080731 None:intergenic 40.0%
ACGTGTTTGCATGAGTTTGT+GGG - Chr2:3075430-3075449 None:intergenic 40.0%
ACTCCGCATCCTTTCATTAT+TGG + Chr2:3079495-3079514 MsG0280006523.01.T01:CDS 40.0%
AGCACAAAACTGGTAAACGA+CGG - Chr2:3079562-3079581 None:intergenic 40.0%
AGGTATAAGATGGTCAATGC+TGG + Chr2:3074928-3074947 MsG0280006523.01.T01:intron 40.0%
AGTACGTAAGTTCTGTGTCA+AGG + Chr2:3080425-3080444 MsG0280006523.01.T01:three_prime_UTR 40.0%
ATACCCAACTGTTCCACAAT+TGG + Chr2:3075976-3075995 MsG0280006523.01.T01:intron 40.0%
ATCATCTCTCGCACATATCA+TGG + Chr2:3079017-3079036 MsG0280006523.01.T01:intron 40.0%
ATCGACACTTGAATCTCTCT+TGG + Chr2:3079892-3079911 MsG0280006523.01.T01:CDS 40.0%
ATGAAGGGTCAGGTATAAGA+TGG + Chr2:3074918-3074937 MsG0280006523.01.T01:intron 40.0%
ATGCGTTTCCTGAATATTGC+AGG + Chr2:3075894-3075913 MsG0280006523.01.T01:intron 40.0%
ATTCTGCTGCCAAACCTTAT+GGG - Chr2:3078623-3078642 None:intergenic 40.0%
ATTGTCAAGGAGCAGTGAAA+CGG - Chr2:3077408-3077427 None:intergenic 40.0%
CAAACCATGTGGTCTAGAAA+AGG - Chr2:3077464-3077483 None:intergenic 40.0%
CAGGAAGACTTATCCATGAA+TGG + Chr2:3075071-3075090 MsG0280006523.01.T01:CDS 40.0%
CATCCTCATCATCTAAAGAC+CGG - Chr2:3076969-3076988 None:intergenic 40.0%
CATCGAAAGCTAAGTGCTTA+CGG - Chr2:3076144-3076163 None:intergenic 40.0%
CGAGAAGTTACGAGTTCAAA+AGG + Chr2:3076664-3076683 MsG0280006523.01.T01:CDS 40.0%
CTCAATCCTTCTTTGTTGGA+AGG + Chr2:3078972-3078991 MsG0280006523.01.T01:intron 40.0%
CTCATAGCAGTCTCAATTTC+AGG - Chr2:3078285-3078304 None:intergenic 40.0%
CTGCCTTGAACCGATATAAA+TGG + Chr2:3079987-3080006 MsG0280006523.01.T01:CDS 40.0%
CTTCCAATTGTGGAACAGTT+GGG - Chr2:3075982-3076001 None:intergenic 40.0%
GAAAGCAAAGGATCATCCAA+AGG + Chr2:3079853-3079872 MsG0280006523.01.T01:CDS 40.0%
GAAATTGATCAAGCTGAGAC+TGG + Chr2:3079256-3079275 MsG0280006523.01.T01:CDS 40.0%
GAAGTTCAGAAGGCTTATGA+GGG + Chr2:3073726-3073745 MsG0280006523.01.T01:CDS 40.0%
GAATGAATCGATTAGGGAAG+CGG + Chr2:3073674-3073693 MsG0280006523.01.T01:CDS 40.0%
GACTTATTTATGCCTTCGGA+AGG + Chr2:3080697-3080716 MsG0280006523.01.T01:three_prime_UTR 40.0%
GGAAGCAAAAGATTGTCTTC+TGG + Chr2:3075015-3075034 MsG0280006523.01.T01:intron 40.0%
GGAAGTAATGTATACTTGCC+TGG - Chr2:3079541-3079560 None:intergenic 40.0%
GGGTATGTTTGGATTTGGAT+TGG + Chr2:3074081-3074100 MsG0280006523.01.T01:intron 40.0%
GTCATGAGATGAGAAGAGAA+GGG - Chr2:3076122-3076141 None:intergenic 40.0%
GTGATATATGTGTGTGTGTG+TGG + Chr2:3074041-3074060 MsG0280006523.01.T01:CDS 40.0%
GTTGTTGGCAAATGCTCATA+AGG + Chr2:3076833-3076852 MsG0280006523.01.T01:intron 40.0%
GTTGTTTGACTCTGATCTGA+AGG - Chr2:3076512-3076531 None:intergenic 40.0%
TACAACACTAGCCAATGCAA+AGG - Chr2:3077189-3077208 None:intergenic 40.0%
TACCTAGCTGCTAATCTCAT+TGG - Chr2:3077113-3077132 None:intergenic 40.0%
TCACCAACTCTTCATAGCAT+GGG - Chr2:3080371-3080390 None:intergenic 40.0%
TCAGAATTCCCATTAGTCCT+AGG - Chr2:3076578-3076597 None:intergenic 40.0%
TCATTGCCTTCCAACAAAGA+AGG - Chr2:3078981-3079000 None:intergenic 40.0%
TCTTCCAATTGTGGAACAGT+TGG - Chr2:3075983-3076002 None:intergenic 40.0%
TGATTCGCTAATGCTTCAAC+AGG - Chr2:3075603-3075622 None:intergenic 40.0%
TGGGGACTTATTTATGCCTT+CGG + Chr2:3080693-3080712 MsG0280006523.01.T01:three_prime_UTR 40.0%
TGGGTTATAGAATCTCTTCC+TGG + Chr2:3076611-3076630 MsG0280006523.01.T01:CDS 40.0%
TGTATGTGTGAACCACAAAG+TGG + Chr2:3079615-3079634 MsG0280006523.01.T01:intron 40.0%
TGTGGATGAAGATAATGCCT+TGG + Chr2:3076481-3076500 MsG0280006523.01.T01:intron 40.0%
TGTGTTTAAGGATTTAGCGG+CGG + Chr2:3073650-3073669 MsG0280006523.01.T01:CDS 40.0%
TGTTCCACAATTGGAAGATG+CGG + Chr2:3075985-3076004 MsG0280006523.01.T01:intron 40.0%
TTAGTCCCAAATCCAAATCG+AGG - Chr2:3077248-3077267 None:intergenic 40.0%
TTCCAATGAGATTAGCAGCT+AGG + Chr2:3077108-3077127 MsG0280006523.01.T01:intron 40.0%
TTGAACAATCCTCTGCAGTT+CGG - Chr2:3080081-3080100 None:intergenic 40.0%
TTTGAATCTGCTGCAGAAGT+TGG + Chr2:3075653-3075672 MsG0280006523.01.T01:CDS 40.0%
! AAAGCAAGGAATAGAGCATC+AGG - Chr2:3075683-3075702 None:intergenic 40.0%
! AAGGCAGCTGATTTCTTTGA+GGG - Chr2:3079974-3079993 None:intergenic 40.0%
! AAGGTCTAGGGTTTGAATTC+TGG - Chr2:3077658-3077677 None:intergenic 40.0%
! AATACACACATCAGGGTGTT+GGG - Chr2:3077722-3077741 None:intergenic 40.0%
! AGCTGATTTCTTTGAGGGAT+TGG - Chr2:3079969-3079988 None:intergenic 40.0%
! AGGGTCTTAGTGTTTTACCA+AGG + Chr2:3074621-3074640 MsG0280006523.01.T01:intron 40.0%
! ATTCCATCTAGCCTTTGCAT+TGG + Chr2:3077175-3077194 MsG0280006523.01.T01:intron 40.0%
! CTAGGGTTTGAATTCTGGAA+AGG - Chr2:3077653-3077672 None:intergenic 40.0%
! GAAGTGCCAAATCAGACTTT+CGG + Chr2:3080233-3080252 MsG0280006523.01.T01:three_prime_UTR 40.0%
! GAATGAAAGGTATGACTGCA+TGG + Chr2:3078816-3078835 MsG0280006523.01.T01:intron 40.0%
! GAGGTTTTCTTCTTCAAGAG+AGG + Chr2:3073862-3073881 MsG0280006523.01.T01:intron 40.0%
! GCAGACTTTTGCTTCCTAAA+TGG - Chr2:3079944-3079963 None:intergenic 40.0%
! GGTTGATTCCTGCAATATTC+AGG - Chr2:3075905-3075924 None:intergenic 40.0%
! TATGCCTTTTCTAGACCACA+TGG + Chr2:3077457-3077476 MsG0280006523.01.T01:intron 40.0%
! TGAGTTGAAGGAAGTTCAGA+AGG + Chr2:3073716-3073735 MsG0280006523.01.T01:CDS 40.0%
! TGATGATGCAATGTTCAGGA+TGG + Chr2:3079390-3079409 MsG0280006523.01.T01:CDS 40.0%
! TGGATGATGATGCAATGTTC+AGG + Chr2:3079386-3079405 MsG0280006523.01.T01:CDS 40.0%
! TTACGAAGCAAAGAGCATAC+AGG - Chr2:3078169-3078188 None:intergenic 40.0%
! TTTGAATTCTGGAAAGGGAC+AGG - Chr2:3077647-3077666 None:intergenic 40.0%
!! ACAACTCCTCGATTTGGATT+TGG + Chr2:3077239-3077258 MsG0280006523.01.T01:intron 40.0%
!! ACTTGCAAAGAGCATTGATG+TGG - Chr2:3076791-3076810 None:intergenic 40.0%
!! AGCTGAGAAAAATGATGGGT+TGG + Chr2:3073794-3073813 MsG0280006523.01.T01:CDS 40.0%
!! CAACTCCTCGATTTGGATTT+GGG + Chr2:3077240-3077259 MsG0280006523.01.T01:intron 40.0%
!! CTTGCAAAGAGCATTGATGT+GGG - Chr2:3076790-3076809 None:intergenic 40.0%
!! TGATGATTCAGATAGTGGGA+TGG + Chr2:3079366-3079385 MsG0280006523.01.T01:CDS 40.0%
!! TGGTGCTATCGACAAAATCA+GGG + Chr2:3074845-3074864 MsG0280006523.01.T01:CDS 40.0%
!!! AGCATTGATGTGGGAGATTT+TGG - Chr2:3076781-3076800 None:intergenic 40.0%
!!! GGCTTTATTTTGGAGAGATG+TGG + Chr2:3080211-3080230 MsG0280006523.01.T01:three_prime_UTR 40.0%
AAGCACCATATGCGAATAGG+CGG - Chr2:3075042-3075061 None:intergenic 45.0%
AATACAGCATGGCCAATCCA+TGG - Chr2:3080190-3080209 None:intergenic 45.0%
AATGCTAAGCCGCACCATAT+TGG - Chr2:3078237-3078256 None:intergenic 45.0%
ACAACATGCACGTAAGGAGA+GGG - Chr2:3075398-3075417 None:intergenic 45.0%
ACCTGTATGCCAATATGGTG+CGG + Chr2:3078225-3078244 MsG0280006523.01.T01:intron 45.0%
ACTGCTATGAGTCTGATGTC+TGG + Chr2:3078294-3078313 MsG0280006523.01.T01:intron 45.0%
AGAAGATGATGCAGAGGTTG+GGG + Chr2:3078028-3078047 MsG0280006523.01.T01:intron 45.0%
AGTACCGCTTCCTATTTGCA+AGG - Chr2:3075150-3075169 None:intergenic 45.0%
AGTACTCGCTTGGACAAAGA+AGG - Chr2:3077936-3077955 None:intergenic 45.0%
ATGCCTACAACTCCTCGATT+TGG + Chr2:3077233-3077252 MsG0280006523.01.T01:intron 45.0%
ATGTGTGCAAGTGTTCGAGA+GGG + Chr2:3074131-3074150 MsG0280006523.01.T01:intron 45.0%
ATGTTACACAGGTAAGCCTC+AGG + Chr2:3079721-3079740 MsG0280006523.01.T01:intron 45.0%
ATTCTTCCCTTCACCACTCT+CGG - Chr2:3080308-3080327 None:intergenic 45.0%
CAAAGCCAATCACACCATAG+TGG - Chr2:3075284-3075303 None:intergenic 45.0%
CAAAGTTGTTCAGTGCCTGA+TGG + Chr2:3076221-3076240 MsG0280006523.01.T01:intron 45.0%
CAATGATATCACCGATGGGA+TGG + Chr2:3079113-3079132 MsG0280006523.01.T01:CDS 45.0%
CACGTGTTTGCATGAGTTTG+TGG - Chr2:3075431-3075450 None:intergenic 45.0%
CACTAACTTCAGCAGTGTGT+GGG - Chr2:3079787-3079806 None:intergenic 45.0%
CATTCTGCTGCCAAACCTTA+TGG - Chr2:3078624-3078643 None:intergenic 45.0%
CCTATTCGCATATGGTGCTT+TGG + Chr2:3075042-3075061 MsG0280006523.01.T01:CDS 45.0%
CGAACAGCATATCGAACAGA+AGG - Chr2:3073831-3073850 None:intergenic 45.0%
CGTGTTTGCATGAGTTTGTG+GGG - Chr2:3075429-3075448 None:intergenic 45.0%
CTGCCAAACCTTATGGGAAA+AGG - Chr2:3078617-3078636 None:intergenic 45.0%
CTGCTATGAGTCTGATGTCT+GGG + Chr2:3078295-3078314 MsG0280006523.01.T01:intron 45.0%
CTGCTATTACCCGAGTAAAG+AGG + Chr2:3080594-3080613 MsG0280006523.01.T01:three_prime_UTR 45.0%
GAAGGACTTGTAAGAGCAAC+TGG - Chr2:3077918-3077937 None:intergenic 45.0%
GACAAATATGCCGAGCAAAC+AGG + Chr2:3080389-3080408 MsG0280006523.01.T01:three_prime_UTR 45.0%
GAGAAGATGATGCAGAGGTT+GGG + Chr2:3078027-3078046 MsG0280006523.01.T01:intron 45.0%
GAGTACACAGTAAGAACCTG+AGG - Chr2:3079740-3079759 None:intergenic 45.0%
GAGTTGGACGAGAATTTAGG+TGG + Chr2:3076755-3076774 MsG0280006523.01.T01:intron 45.0%
GCAAATGCTCATAAGGGAGA+GGG + Chr2:3076840-3076859 MsG0280006523.01.T01:intron 45.0%
GGAAGTTCAGAAGGCTTATG+AGG + Chr2:3073725-3073744 MsG0280006523.01.T01:CDS 45.0%
GGATGAAGATAATGCCTTGG+AGG + Chr2:3076484-3076503 MsG0280006523.01.T01:intron 45.0%
GGCGGTGAATGAATCGATTA+GGG + Chr2:3073668-3073687 MsG0280006523.01.T01:CDS 45.0%
GGTCATGAGATGAGAAGAGA+AGG - Chr2:3076123-3076142 None:intergenic 45.0%
GTACCGCTTCCTATTTGCAA+GGG - Chr2:3075149-3075168 None:intergenic 45.0%
GTAGTTGAGGCAGATGAAAC+TGG + Chr2:3079322-3079341 MsG0280006523.01.T01:CDS 45.0%
GTCACCAACTCTTCATAGCA+TGG - Chr2:3080372-3080391 None:intergenic 45.0%
GTGATCGGCGGAGAAAAAAT+TGG - Chr2:3075777-3075796 None:intergenic 45.0%
GTGTTTGCATGAGTTTGTGG+GGG - Chr2:3075428-3075447 None:intergenic 45.0%
GTTGCCGAGTTCATATTGTG+TGG + Chr2:3073614-3073633 MsG0280006523.01.T01:CDS 45.0%
GTTTCCCACTATGGTGTGAT+TGG + Chr2:3075276-3075295 MsG0280006523.01.T01:intron 45.0%
TACGAACCCAGATCATTAGG+CGG - Chr2:3076894-3076913 None:intergenic 45.0%
TAGCCAATGCAAAGGCTAGA+TGG - Chr2:3077181-3077200 None:intergenic 45.0%
TATGCGGTCTGCTATTGATC+AGG + Chr2:3078118-3078137 MsG0280006523.01.T01:intron 45.0%
TCAATTGGGCGAGTTCCAAA+AGG - Chr2:3078463-3078482 None:intergenic 45.0%
TCACTAACTTCAGCAGTGTG+TGG - Chr2:3079788-3079807 None:intergenic 45.0%
TCCTTCAGTTTCTCTCTCTC+CGG + Chr2:3076947-3076966 MsG0280006523.01.T01:CDS 45.0%
TCTCCCATGCTATGAAGAGT+TGG + Chr2:3080365-3080384 MsG0280006523.01.T01:three_prime_UTR 45.0%
TCTCCCTTGCAAATAGGAAG+CGG + Chr2:3075143-3075162 MsG0280006523.01.T01:CDS 45.0%
TCTCCGGTCTTTAGATGATG+AGG + Chr2:3076963-3076982 MsG0280006523.01.T01:CDS 45.0%
TGAACAGCTGCAGTTGTTGT+TGG + Chr2:3076818-3076837 MsG0280006523.01.T01:intron 45.0%
TGATCAATAGCAGACCGCAT+AGG - Chr2:3078119-3078138 None:intergenic 45.0%
TGCTATGAGTCTGATGTCTG+GGG + Chr2:3078296-3078315 MsG0280006523.01.T01:intron 45.0%
TGGAAGCTACATATCCAGAG+AGG + Chr2:3077016-3077035 MsG0280006523.01.T01:CDS 45.0%
TGTTATTGAAGCTCCTGGAC+TGG + Chr2:3075623-3075642 MsG0280006523.01.T01:intron 45.0%
TTCAAACACTTGTCCAGTCC+AGG - Chr2:3075639-3075658 None:intergenic 45.0%
TTGGTAGATTCAACTAGCGG+CGG + Chr2:3073573-3073592 MsG0280006523.01.T01:CDS 45.0%
TTGTCAAGGAGCAGTGAAAC+GGG - Chr2:3077407-3077426 None:intergenic 45.0%
! AGCAGTGTGTGGGTTAACAA+AGG - Chr2:3079777-3079796 None:intergenic 45.0%
! ATCACACCATAGTGGGAAAC+AGG - Chr2:3075276-3075295 None:intergenic 45.0%
! CAAGGCAGCTGATTTCTTTG+AGG - Chr2:3079975-3079994 None:intergenic 45.0%
! CCAAAGCACCATATGCGAAT+AGG - Chr2:3075045-3075064 None:intergenic 45.0%
! CGAAGCACTTGAATTGGTGA+TGG + Chr2:3080261-3080280 MsG0280006523.01.T01:three_prime_UTR 45.0%
! GCCTTCGGAAGGTGAATTTT+TGG + Chr2:3080708-3080727 MsG0280006523.01.T01:three_prime_UTR 45.0%
! GCTATACAGAAGCACAGCAA+TGG + Chr2:3076354-3076373 MsG0280006523.01.T01:CDS 45.0%
! GTGCCTTTTCCCATAAGGTT+TGG + Chr2:3078611-3078630 MsG0280006523.01.T01:intron 45.0%
! TGGTTTGGCTAGGGGATTAA+AGG - Chr2:3077686-3077705 None:intergenic 45.0%
! TTGGTAGAGCTGAACGGATT+TGG - Chr2:3075758-3075777 None:intergenic 45.0%
!! ATGGAGATTGATGGTGATGG+TGG + Chr2:3073759-3073778 MsG0280006523.01.T01:CDS 45.0%
!! CACTATGGTGTGATTGGCTT+TGG + Chr2:3075282-3075301 MsG0280006523.01.T01:intron 45.0%
!! CTGGTGCTATCGACAAAATC+AGG + Chr2:3074844-3074863 MsG0280006523.01.T01:CDS 45.0%
!! GCTGCTTTGGAAACACAACT+TGG + Chr2:3080515-3080534 MsG0280006523.01.T01:three_prime_UTR 45.0%
!! GCTGTTCGTAGATTGATTCG+AGG + Chr2:3073843-3073862 MsG0280006523.01.T01:CDS 45.0%
!! TGGATTGGCCATGCTGTATT+TGG + Chr2:3080190-3080209 MsG0280006523.01.T01:three_prime_UTR 45.0%
AACATGCACGTAAGGAGAGG+GGG - Chr2:3075396-3075415 None:intergenic 50.0%
AAGGCTTATGAGGGTGGTCA+AGG + Chr2:3073735-3073754 MsG0280006523.01.T01:CDS 50.0%
AAGTCACTAGCAACCGAGAG+TGG + Chr2:3080292-3080311 MsG0280006523.01.T01:three_prime_UTR 50.0%
ACCGGAGAGAGAGAAACTGA+AGG - Chr2:3076951-3076970 None:intergenic 50.0%
ACCTCTGCATCATCTTCTCC+AGG - Chr2:3078026-3078045 None:intergenic 50.0%
ACCTGCAAGACATCCAGATG+CGG + Chr2:3079174-3079193 MsG0280006523.01.T01:CDS 50.0%
ACTCAGGAAGGAGAGGTGAT+CGG - Chr2:3075792-3075811 None:intergenic 50.0%
AGCAGCAACCCTATATGTCC+TGG - Chr2:3080579-3080598 None:intergenic 50.0%
AGCCTCGTGTTCACAGTGTT+TGG + Chr2:3075932-3075951 MsG0280006523.01.T01:intron 50.0%
AGGCTTATGAGGGTGGTCAA+GGG + Chr2:3073736-3073755 MsG0280006523.01.T01:CDS 50.0%
ATCATCTTCTCCAGGGGACT+CGG - Chr2:3078018-3078037 None:intergenic 50.0%
CAACATGCACGTAAGGAGAG+GGG - Chr2:3075397-3075416 None:intergenic 50.0%
CAAGCTGAGACTGGTGAAAC+AGG + Chr2:3079265-3079284 MsG0280006523.01.T01:CDS 50.0%
CAAGTGTTCGAGAGGGCTTA+TGG + Chr2:3074138-3074157 MsG0280006523.01.T01:intron 50.0%
CACAACATGCACGTAAGGAG+AGG - Chr2:3075399-3075418 None:intergenic 50.0%
CACAGTCATCAGCTCCTATG+CGG + Chr2:3078102-3078121 MsG0280006523.01.T01:intron 50.0%
CAGCTCAGTCAGCGTATATC+GGG + Chr2:3079809-3079828 MsG0280006523.01.T01:CDS 50.0%
CATGTGTGCAAGTGTTCGAG+AGG + Chr2:3074130-3074149 MsG0280006523.01.T01:intron 50.0%
CCTCTGCATCATCTTCTCCA+GGG - Chr2:3078025-3078044 None:intergenic 50.0%
CGACTCTGAGTCTGTAGTTG+AGG + Chr2:3079309-3079328 MsG0280006523.01.T01:CDS 50.0%
CGGCGGTGAATGAATCGATT+AGG + Chr2:3073667-3073686 MsG0280006523.01.T01:CDS 50.0%
CTCTGCATCATCTTCTCCAG+GGG - Chr2:3078024-3078043 None:intergenic 50.0%
CTGATCTGAAGGTTCCTCCA+AGG - Chr2:3076501-3076520 None:intergenic 50.0%
GAACTCGTAACTTCTCGTCG+TGG - Chr2:3076661-3076680 None:intergenic 50.0%
GACTCGCCGAAAGTCTGATT+TGG - Chr2:3080242-3080261 None:intergenic 50.0%
GATGCCGCATCTTCCAATTG+TGG - Chr2:3075992-3076011 None:intergenic 50.0%
GCAGCTCAGTCAGCGTATAT+CGG + Chr2:3079808-3079827 MsG0280006523.01.T01:CDS 50.0%
GCATGCACAACATGCACGTA+AGG - Chr2:3075404-3075423 None:intergenic 50.0%
GCTCTTCTTGCCTGTTTGCT+CGG - Chr2:3080402-3080421 None:intergenic 50.0%
GGAGAAGATGATGCAGAGGT+TGG + Chr2:3078026-3078045 MsG0280006523.01.T01:intron 50.0%
GGCAAATGCTCATAAGGGAG+AGG + Chr2:3076839-3076858 MsG0280006523.01.T01:intron 50.0%
GGTCAAGGGATGGAGATTGA+TGG + Chr2:3073750-3073769 MsG0280006523.01.T01:CDS 50.0%
GGTCTGTTCACTGCATCTCT+TGG + Chr2:3076713-3076732 MsG0280006523.01.T01:CDS 50.0%
GTACATCATCACTGCAGTCG+TGG - Chr2:3077864-3077883 None:intergenic 50.0%
GTCTGATGTCTGGGGAAAGA+TGG + Chr2:3078304-3078323 MsG0280006523.01.T01:intron 50.0%
GTGAAACAGGTGAGAGCGAT+GGG + Chr2:3079278-3079297 MsG0280006523.01.T01:CDS 50.0%
GTTCAGAAGGCTTATGAGGG+TGG + Chr2:3073729-3073748 MsG0280006523.01.T01:CDS 50.0%
GTTGAGCCGCCTAATGATCT+GGG + Chr2:3076885-3076904 MsG0280006523.01.T01:intron 50.0%
TAGCAACCGAGAGTGGTGAA+GGG + Chr2:3080299-3080318 MsG0280006523.01.T01:three_prime_UTR 50.0%
TGAATCGATTAGGGAAGCGG+CGG + Chr2:3073677-3073696 MsG0280006523.01.T01:CDS 50.0%
TGAGGCAGATGAAACTGGTC+AGG + Chr2:3079327-3079346 MsG0280006523.01.T01:CDS 50.0%
TGGGGATGCACCTGAATTGA+TGG + Chr2:3078046-3078065 MsG0280006523.01.T01:intron 50.0%
TTATGAGGGTGGTCAAGGGA+TGG + Chr2:3073740-3073759 MsG0280006523.01.T01:CDS 50.0%
! GCGAGTCGAAGCACTTGAAT+TGG + Chr2:3080255-3080274 MsG0280006523.01.T01:three_prime_UTR 50.0%
! TATGGTGCTTTGGCTCGATC+AGG + Chr2:3075052-3075071 MsG0280006523.01.T01:CDS 50.0%
! TGTGTGGGTTAACAAAGGCG+CGG - Chr2:3079772-3079791 None:intergenic 50.0%
!! AGCTCACTTGGTTTGGCTAG+GGG - Chr2:3077694-3077713 None:intergenic 50.0%
!! CAGCTCACTTGGTTTGGCTA+GGG - Chr2:3077695-3077714 None:intergenic 50.0%
!! GGGAAAATCGTCGGCTTGTT+GGG + Chr2:3074964-3074983 MsG0280006523.01.T01:intron 50.0%
!! GGGATGGAGATTGATGGTGA+TGG + Chr2:3073756-3073775 MsG0280006523.01.T01:CDS 50.0%
!! TGGGAAAATCGTCGGCTTGT+TGG + Chr2:3074963-3074982 MsG0280006523.01.T01:intron 50.0%
ATCCGCATCAGCCATCCCAT+CGG - Chr2:3079127-3079146 None:intergenic 55.0%
CCCTGGAGAAGATGATGCAG+AGG + Chr2:3078022-3078041 MsG0280006523.01.T01:intron 55.0%
CCTGCAAGACATCCAGATGC+GGG + Chr2:3079175-3079194 MsG0280006523.01.T01:CDS 55.0%
CGCATAGGAGCTGATGACTG+TGG - Chr2:3078104-3078123 None:intergenic 55.0%
CGCATGCCTGTTTCCCACTA+TGG + Chr2:3075267-3075286 MsG0280006523.01.T01:intron 55.0%
CGTTGAGCCGCCTAATGATC+TGG + Chr2:3076884-3076903 MsG0280006523.01.T01:intron 55.0%
CTAGCAACCGAGAGTGGTGA+AGG + Chr2:3080298-3080317 MsG0280006523.01.T01:three_prime_UTR 55.0%
GCAGCTTCTGAGTACTCGCT+TGG - Chr2:3077946-3077965 None:intergenic 55.0%
GCCGCACCATATTGGCATAC+AGG - Chr2:3078229-3078248 None:intergenic 55.0%
GCGGCTTAGCATTGCGTTAG+AGG + Chr2:3078244-3078263 MsG0280006523.01.T01:intron 55.0%
GGAAGCGGCGGTGAAACAAA+TGG + Chr2:3073689-3073708 MsG0280006523.01.T01:CDS 55.0%
GGAGAGGGGGCAGAAATGTT+TGG - Chr2:3075383-3075402 None:intergenic 55.0%
GGCCAAACACTGTGAACACG+AGG - Chr2:3075937-3075956 None:intergenic 55.0%
GGTGAAACAGGTGAGAGCGA+TGG + Chr2:3079277-3079296 MsG0280006523.01.T01:CDS 55.0%
GTAGATTCAACTAGCGGCGG+CGG + Chr2:3073576-3073595 MsG0280006523.01.T01:CDS 55.0%
GTGAACACGAGGCTGACAGA+AGG - Chr2:3075926-3075945 None:intergenic 55.0%
TCATCTGCACTTCCCGCATC+TGG - Chr2:3079190-3079209 None:intergenic 55.0%
TCATCTTCTCCAGGGGACTC+GGG - Chr2:3078017-3078036 None:intergenic 55.0%
TCCAAAGCAGCTTGAGCCTC+AGG - Chr2:3080506-3080525 None:intergenic 55.0%
TCCTGAGGCTCAAGCTGCTT+TGG + Chr2:3080502-3080521 MsG0280006523.01.T01:three_prime_UTR 55.0%
TCTGATATTCCCGAGTCCCC+TGG + Chr2:3078005-3078024 MsG0280006523.01.T01:intron 55.0%
! GTGTGGGTTAACAAAGGCGC+GGG - Chr2:3079771-3079790 None:intergenic 55.0%
!! ACACACATCAGGGTGTTGGG+TGG - Chr2:3077719-3077738 None:intergenic 55.0%
!! AGCTCTCTAGGGCCCTTGTT+TGG + Chr2:3074212-3074231 MsG0280006523.01.T01:intron 55.0%
!! CACACATCAGGGTGTTGGGT+GGG - Chr2:3077718-3077737 None:intergenic 55.0%
!! GCAGCTCACTTGGTTTGGCT+AGG - Chr2:3077696-3077715 None:intergenic 55.0%
ACGACATCAGCCGAAGGACG+TGG - Chr2:3076867-3076886 None:intergenic 60.0%
CACCGATGGGATGGCTGATG+CGG + Chr2:3079122-3079141 MsG0280006523.01.T01:CDS 60.0%
CAGGAAGGAGAGGTGATCGG+CGG - Chr2:3075789-3075808 None:intergenic 60.0%
CCCGCATCTGGATGTCTTGC+AGG - Chr2:3079178-3079197 None:intergenic 60.0%
CGACATCAGCCGAAGGACGT+GGG - Chr2:3076866-3076885 None:intergenic 60.0%
CTCTTGCAGTGTGCGCGACA+GGG + Chr2:3074795-3074814 MsG0280006523.01.T01:intron 60.0%
CTGGGCCGCCTATTCGCATA+TGG + Chr2:3075034-3075053 MsG0280006523.01.T01:CDS 60.0%
GGCTCAACGACATCAGCCGA+AGG - Chr2:3076873-3076892 None:intergenic 60.0%
GGTGGGCAGCTCACTTGGTT+TGG - Chr2:3077701-3077720 None:intergenic 60.0%
TGTTGGGTGGGCAGCTCACT+TGG - Chr2:3077706-3077725 None:intergenic 60.0%
TTGCGGAGTCCGAACTGCAG+AGG + Chr2:3080069-3080088 MsG0280006523.01.T01:CDS 60.0%
! GCGCGACAGGGTTTTGCTCT+AGG + Chr2:3074807-3074826 MsG0280006523.01.T01:CDS 60.0%
!! GCGGCACTGATGAGCAGGAA+AGG + Chr2:3077836-3077855 MsG0280006523.01.T01:intron 60.0%
!! TCTCTGCGGCACTGATGAGC+AGG + Chr2:3077831-3077850 MsG0280006523.01.T01:intron 60.0%
ACTAGCGGCGGCGGTAGTTG+TGG + Chr2:3073585-3073604 MsG0280006523.01.T01:CDS 65.0%
GCTCTTGCAGTGTGCGCGAC+AGG + Chr2:3074794-3074813 MsG0280006523.01.T01:intron 65.0%
GGGAGAGGGCCCACGTCCTT+CGG + Chr2:3076854-3076873 MsG0280006523.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 3073570 3080849 3073570 ID=MsG0280006523.01;Name=MsG0280006523.01
Chr2 mRNA 3073570 3080849 3073570 ID=MsG0280006523.01.T01;Parent=MsG0280006523.01;Name=MsG0280006523.01.T01;_AED=0.41;_eAED=0.43;_QI=0|0.2|0.18|1|1|1|11|717|747
Chr2 exon 3073570 3073864 3073570 ID=MsG0280006523.01.T01:exon:606;Parent=MsG0280006523.01.T01
Chr2 exon 3074021 3074082 3074021 ID=MsG0280006523.01.T01:exon:607;Parent=MsG0280006523.01.T01
Chr2 exon 3074804 3074929 3074804 ID=MsG0280006523.01.T01:exon:608;Parent=MsG0280006523.01.T01
Chr2 exon 3075016 3075164 3075016 ID=MsG0280006523.01.T01:exon:609;Parent=MsG0280006523.01.T01
Chr2 exon 3075634 3075823 3075634 ID=MsG0280006523.01.T01:exon:610;Parent=MsG0280006523.01.T01
Chr2 exon 3075916 3075946 3075916 ID=MsG0280006523.01.T01:exon:611;Parent=MsG0280006523.01.T01
Chr2 exon 3076310 3076387 3076310 ID=MsG0280006523.01.T01:exon:612;Parent=MsG0280006523.01.T01
Chr2 exon 3076492 3076773 3076492 ID=MsG0280006523.01.T01:exon:613;Parent=MsG0280006523.01.T01
Chr2 exon 3076932 3077037 3076932 ID=MsG0280006523.01.T01:exon:614;Parent=MsG0280006523.01.T01
Chr2 exon 3079096 3079619 3079096 ID=MsG0280006523.01.T01:exon:615;Parent=MsG0280006523.01.T01
Chr2 exon 3079732 3080849 3079732 ID=MsG0280006523.01.T01:exon:616;Parent=MsG0280006523.01.T01
Chr2 CDS 3073570 3073864 3073570 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 CDS 3074021 3074082 3074021 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 CDS 3074804 3074929 3074804 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 CDS 3075016 3075164 3075016 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 CDS 3075634 3075823 3075634 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 CDS 3075916 3075946 3075916 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 CDS 3076310 3076387 3076310 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 CDS 3076492 3076773 3076492 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 CDS 3076932 3077037 3076932 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 CDS 3079096 3079619 3079096 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 CDS 3079732 3080132 3079732 ID=MsG0280006523.01.T01:cds;Parent=MsG0280006523.01.T01
Chr2 three_prime_UTR 3080133 3080849 3080133 ID=MsG0280006523.01.T01:three_prime_utr;Parent=MsG0280006523.01.T01
Gene Sequence

>MsG0280006523.01.T01

ATGTTGGTAGATTCAACTAGCGGCGGCGGTAGTTGTGGTGATTCGTTGCCGAGTTCATATTGTGTGGAGTTTCATATTGGTGTGTTTAAGGATTTAGCGGCGGTGAATGAATCGATTAGGGAAGCGGCGGTGAAACAAATGGTGAATGAGTTGAAGGAAGTTCAGAAGGCTTATGAGGGTGGTCAAGGGATGGAGATTGATGGTGATGGTGGTTTTAAGCTTGAAGCTGAGAAAAATGATGGGTTGGATGAATGTGCTCCTTCTGTTCGATATGCTGTTCGTAGATTGATTCGAGGTGGTATGAATCATGAGATTGTGATATATGTGTGTGTGTGTGGTGCTTGTTTTATAATTAGGTGTGCGCGACAGGGTTTTGCTCTAGGTTTAACACTTTTAGCTGGTGCTATCGACAAAATCAGGGTTGACTCGTTCCTTAAACTCGTAGTAGATTTATTGGAAGTAACTTCATCAATGAAGGGTCAGGAAGCAAAAGATTGTCTTCTGGGCCGCCTATTCGCATATGGTGCTTTGGCTCGATCAGGAAGACTTATCCATGAATGGAGCAATGATAAAAATACTCCATACATCAAAGAATTTGTCGGTATACTTATCTCCCTTGCAAATAGGAAGCGCTCCTGGACTGGACAAGTGTTTGAATCTGCTGCAGAAGTTGGAAATCCTGATGCTCTATTCCTTGCTTTAAAAGTTCGAGAGAAAATTTCTACAGACAGTTCCATTTATGGCAAACTACTACCAAATCCGTTCAGCTCTACCAATTTTTTCTCCGCCGATCACCTCTCCTTCCTGAGTAATTGTTTGAAGGAATCAACCTTCTGTCAGCCTCGTGTTCACAATTGGGTGGGTGACGATGATGTCAAAAGAGTTGCTGTTATAGTGGCTATACAGAAGCACAGCAATGGAAAATTTGACTATAATGCCTTGGAGGAACCTTCAGATCAGAGTCAAACAACAGACGAAAATTCTGAAATAGGCTCTATTGAGGATAAAGAATCTCCTAGGACTAATGGGAATTCTGACTTTTTGAAGAGTTGGGTTATAGAATCTCTTCCTGGTATTTTGAAATTCTTAAAGCTGGACCACGACGAGAAGTTACGAGTTCAAAAGGAAATAATGAAGTTTATGGCTGTTCAGGGTCTGTTCACTGCATCTCTTGGCACTGAAGTGACTTCATTTGAGTTGGACGAGAATTTAGCACCTTATGCAATATTCCTTCAGTTTCTCTCTCTCCGGTCTTTAGATGATGAGGATGACAAAGCAGTAAAAGATTTGCAAGCAATGGAAGCTACATATCCAGAGAGGTGTTCAAATGCTTTTGCAATGATATCACCGATGGGATGGCTGATGCGGATGTTGCGAGTCATAAAGAAAAATTTAAAACCTGCAAGACATCCAGATGCGGGAAGTGCAGATGAAGATGACGACGATGAAGATGATGACTTATTCAATATTGAAGATGAAGAAATTGATCAAGCTGAGACTGGTGAAACAGGTGAGAGCGATGGGCAGACTGACGACTCTGAGTCTGTAGTTGAGGCAGATGAAACTGGTCAGGACCACCCTGAAGATTCTGATGATTCAGATAGTGGGATGGATGATGATGCAATGTTCAGGATGGATACATATCTTGCTCAGATTTTCAAAGAGAAGAAAAGTCAGTCTGGAAGTGAAACTGCTCATTCCCAACTTTTGTTGTTCAAACTCCGCATCCTTTCATTATTGGAAATTTTTGTTCATGAAAATCCAGGCAAGTATACATTACTTCCGTCGTTTACCAGTTTTGTGCTAGCTTTGTGTCTGTTATTATACTATTCTCCAATTGTATGTAAGCCTCAGGTTCTTACTGTGTACTCACATTTGGCCCGCGCCTTTGTTAACCCACACACTGCTGAAGTTAGTGAGCAGCTCAGTCAGCGTATATCGGGAATATTGCAGAAGAAAATATTGAAAGCAAAGGATCATCCAAAGGGTGATGAAGTCCAATTATCGACACTTGAATCTCTCTTGGAGAGAAATTTGAAACTAGCATCAAAACCATTTAGGAAGCAAAAGTCTGCAACCAATCCCTCAAAGAAATCAGCTGCCTTGAACCGATATAAATGGTTTCTTCCTTTGCCCAAATTCTTCCTTTTGGATTTTGAAAATTGTCGATTCAAGAAATTTTGCGGAGTCCGAACTGCAGAGGATTGTTCAAATTTTCCAGAAAATATTGGTGGATTATTTTGA
Protein sequence

>MsG0280006523.01.T01

MLVDSTSGGGSCGDSLPSSYCVEFHIGVFKDLAAVNESIREAAVKQMVNELKEVQKAYEGGQGMEIDGDGGFKLEAEKNDGLDECAPSVRYAVRRLIRGGMNHEIVIYVCVCGACFIIRCARQGFALGLTLLAGAIDKIRVDSFLKLVVDLLEVTSSMKGQEAKDCLLGRLFAYGALARSGRLIHEWSNDKNTPYIKEFVGILISLANRKRSWTGQVFESAAEVGNPDALFLALKVREKISTDSSIYGKLLPNPFSSTNFFSADHLSFLSNCLKESTFCQPRVHNWVGDDDVKRVAVIVAIQKHSNGKFDYNALEEPSDQSQTTDENSEIGSIEDKESPRTNGNSDFLKSWVIESLPGILKFLKLDHDEKLRVQKEIMKFMAVQGLFTASLGTEVTSFELDENLAPYAIFLQFLSLRSLDDEDDKAVKDLQAMEATYPERCSNAFAMISPMGWLMRMLRVIKKNLKPARHPDAGSADEDDDDEDDDLFNIEDEEIDQAETGETGESDGQTDDSESVVEADETGQDHPEDSDDSDSGMDDDAMFRMDTYLAQIFKEKKSQSGSETAHSQLLLFKLRILSLLEIFVHENPGKYTLLPSFTSFVLALCLLLYYSPIVCKPQVLTVYSHLARAFVNPHTAEVSEQLSQRISGILQKKILKAKDHPKGDEVQLSTLESLLERNLKLASKPFRKQKSATNPSKKSAALNRYKWFLPLPKFFLLDFENCRFKKFCGVRTAEDCSNFPENIGGLF*