Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018461.01.T01 | XP_013454739.1 | 93.75 | 448 | 17 | 2 | 1 | 448 | 1 | 437 | 0 | 760 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018461.01.T01 | Q9C829 | 46.3 | 473 | 194 | 15 | 1 | 447 | 1 | 439 | 3.69E-103 | 317 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018461.01.T01 | A0A072USC3 | 93.750 | 448 | 17 | 2 | 1 | 448 | 1 | 437 | 0.0 | 760 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000799.01 | MsG0480018461.01 | 0.865150 | 7.275265e-65 | 2.342874e-61 |
| MsG0180000882.01 | MsG0480018461.01 | 0.814991 | 1.162097e-51 | 7.914812e-49 |
| MsG0180001006.01 | MsG0480018461.01 | 0.813729 | 2.208694e-51 | 1.453836e-48 |
| MsG0180001294.01 | MsG0480018461.01 | 0.810298 | 1.235650e-50 | 7.420544e-48 |
| MsG0180003257.01 | MsG0480018461.01 | 0.829764 | 4.288925e-55 | 4.432177e-52 |
| MsG0180003302.01 | MsG0480018461.01 | 0.803998 | 2.667337e-49 | 1.359881e-46 |
| MsG0180003409.01 | MsG0480018461.01 | 0.883398 | 4.640384e-71 | 2.936890e-67 |
| MsG0180003627.01 | MsG0480018461.01 | 0.842179 | 3.028971e-58 | 4.554939e-55 |
| MsG0180004050.01 | MsG0480018461.01 | 0.828794 | 7.372627e-55 | 7.404054e-52 |
| MsG0180004152.01 | MsG0480018461.01 | 0.805995 | 1.019881e-49 | 5.473698e-47 |
| MsG0180004320.01 | MsG0480018461.01 | 0.851222 | 1.021676e-60 | 2.053525e-57 |
| MsG0180004509.01 | MsG0480018461.01 | 0.803534 | 3.330592e-49 | 1.677891e-46 |
| MsG0180005765.01 | MsG0480018461.01 | 0.816386 | 5.679330e-52 | 4.018548e-49 |
| MsG0180006013.01 | MsG0480018461.01 | 0.852837 | 3.552948e-61 | 7.522944e-58 |
| MsG0180006069.01 | MsG0480018461.01 | 0.815081 | 1.109473e-51 | 7.574670e-49 |
| MsG0180006143.01 | MsG0480018461.01 | 0.827391 | 1.605196e-54 | 1.547770e-51 |
| MsG0280006313.01 | MsG0480018461.01 | 0.847832 | 9.007478e-60 | 1.621247e-56 |
| MsG0280006406.01 | MsG0480018461.01 | 0.806036 | 9.998478e-50 | 5.371606e-47 |
| MsG0280006424.01 | MsG0480018461.01 | 0.810427 | 1.159237e-50 | 6.985335e-48 |
| MsG0280010633.01 | MsG0480018461.01 | 0.801573 | 8.449962e-49 | 4.049055e-46 |
| MsG0280011141.01 | MsG0480018461.01 | 0.818524 | 1.874505e-52 | 1.406486e-49 |
| MsG0380012471.01 | MsG0480018461.01 | 0.803469 | 3.434988e-49 | 1.727510e-46 |
| MsG0380014539.01 | MsG0480018461.01 | 0.839937 | 1.175190e-57 | 1.648148e-54 |
| MsG0380014647.01 | MsG0480018461.01 | 0.819881 | 9.201396e-53 | 7.168870e-50 |
| MsG0480018461.01 | MsG0480018462.01 | 0.834330 | 3.190681e-56 | 3.774490e-53 |
| MsG0480018461.01 | MsG0480018477.01 | 0.814972 | 1.173367e-51 | 7.987328e-49 |
| MsG0480018461.01 | MsG0480018894.01 | 0.829589 | 4.729948e-55 | 4.862429e-52 |
| MsG0480018461.01 | MsG0480019486.01 | 0.866572 | 2.585257e-65 | 8.754551e-62 |
| MsG0480018461.01 | MsG0480020065.01 | 0.810882 | 9.238718e-51 | 5.635726e-48 |
| MsG0480018461.01 | MsG0480021034.01 | 0.836266 | 1.035198e-56 | 1.298001e-53 |
| MsG0480018461.01 | MsG0480021904.01 | 0.835609 | 1.518607e-56 | 1.866510e-53 |
| MsG0480018461.01 | MsG0480021953.01 | 0.819697 | 1.013414e-52 | 7.855072e-50 |
| MsG0480018461.01 | MsG0480022164.01 | 0.838737 | 2.407881e-57 | 3.254633e-54 |
| MsG0480018461.01 | MsG0480022481.01 | 0.809740 | 1.629504e-50 | 9.644835e-48 |
| MsG0480018461.01 | MsG0480022678.01 | 0.818434 | 1.964061e-52 | 1.470139e-49 |
| MsG0480018461.01 | MsG0480022965.01 | 0.802867 | 4.575146e-49 | 2.265804e-46 |
| MsG0480018461.01 | MsG0480023399.01 | 0.814798 | 1.282251e-51 | 8.687696e-49 |
| MsG0480018461.01 | MsG0480023412.01 | 0.812056 | 5.135985e-51 | 3.231873e-48 |
| MsG0480018461.01 | MsG0480023415.01 | 0.805352 | 1.391324e-49 | 7.344574e-47 |
| MsG0480018461.01 | MsG0480023707.01 | 0.813316 | 2.722904e-51 | 1.772257e-48 |
| MsG0480018461.01 | MsG0580024353.01 | 0.846224 | 2.484028e-59 | 4.245604e-56 |
| MsG0480018461.01 | MsG0580024374.01 | 0.804789 | 1.824760e-49 | 9.494485e-47 |
| MsG0480018461.01 | MsG0580025134.01 | 0.811413 | 7.090069e-51 | 4.385931e-48 |
| MsG0480018461.01 | MsG0580025421.01 | 0.821902 | 3.154652e-53 | 2.600405e-50 |
| MsG0480018461.01 | MsG0580026157.01 | 0.822313 | 2.532143e-53 | 2.111944e-50 |
| MsG0480018461.01 | MsG0680031651.01 | 0.826470 | 2.666281e-54 | 2.502635e-51 |
| MsG0480018461.01 | MsG0680032430.01 | 0.825427 | 4.716518e-54 | 4.297388e-51 |
| MsG0480018461.01 | MsG0680034061.01 | 0.865345 | 6.316297e-65 | 2.047982e-61 |
| MsG0480018461.01 | MsG0680034392.01 | 0.823796 | 1.142266e-53 | 9.935996e-51 |
| MsG0480018461.01 | MsG0680034395.01 | 0.814456 | 1.526918e-51 | 1.025039e-48 |
| MsG0480018461.01 | MsG0680035306.01 | 0.817542 | 3.123631e-52 | 2.281335e-49 |
| MsG0480018461.01 | MsG0680035777.01 | 0.817580 | 3.062977e-52 | 2.239291e-49 |
| MsG0480018461.01 | MsG0780038565.01 | 0.822435 | 2.372489e-53 | 1.985711e-50 |
| MsG0480018461.01 | MsG0780038645.01 | 0.867538 | 1.271374e-65 | 4.454728e-62 |
| MsG0480018461.01 | MsG0780038837.01 | 0.802913 | 4.477507e-49 | 2.220040e-46 |
| MsG0480018461.01 | MsG0780039137.01 | 0.806498 | 7.989242e-50 | 4.342939e-47 |
| MsG0480018461.01 | MsG0780039570.01 | 0.818687 | 1.720863e-52 | 1.296980e-49 |
| MsG0480018461.01 | MsG0780040445.01 | 0.801617 | 8.275865e-49 | 3.969966e-46 |
| MsG0480018461.01 | MsG0780040845.01 | 0.811564 | 6.573790e-51 | 4.082753e-48 |
| MsG0480018461.01 | MsG0780040861.01 | 0.878155 | 3.529494e-69 | 1.823274e-65 |
| MsG0480018461.01 | MsG0780041295.01 | 0.849165 | 3.852332e-60 | 7.240109e-57 |
| MsG0480018461.01 | MsG0780041559.01 | 0.852247 | 5.232759e-61 | 1.086749e-57 |
| MsG0480018461.01 | MsG0780041796.01 | 0.808287 | 3.335903e-50 | 1.899875e-47 |
| MsG0480018461.01 | MsG0880042604.01 | 0.814502 | 1.491104e-51 | 1.002307e-48 |
| MsG0480018461.01 | MsG0880042779.01 | 0.803261 | 3.792157e-49 | 1.896973e-46 |
| MsG0480018461.01 | MsG0880042848.01 | 0.823215 | 1.561572e-53 | 1.336115e-50 |
| MsG0480018461.01 | MsG0880042860.01 | 0.813915 | 2.009630e-51 | 1.329420e-48 |
| MsG0480018461.01 | MsG0880043163.01 | 0.813866 | 2.060356e-51 | 1.361194e-48 |
| MsG0480018461.01 | MsG0880043592.01 | 0.826240 | 3.024314e-54 | 2.820306e-51 |
| MsG0480018461.01 | MsG0880045619.01 | 0.823708 | 1.197895e-53 | 1.039490e-50 |
| MsG0480018461.01 | MsG0880045653.01 | 0.812751 | 3.620386e-51 | 2.320946e-48 |
| MsG0480018461.01 | MsG0880046177.01 | 0.816483 | 5.402437e-52 | 3.832654e-49 |
| MsG0480018461.01 | MsG0880046328.01 | 0.848907 | 4.544819e-60 | 8.469088e-57 |
| MsG0480018461.01 | MsG0880046933.01 | 0.847127 | 1.407418e-59 | 2.477065e-56 |
| MsG0480018461.01 | MsG0880046947.01 | 0.808069 | 3.712196e-50 | 2.101970e-47 |
| MsG0480018461.01 | MsG0880047016.01 | 0.817438 | 3.298330e-52 | 2.402048e-49 |
| MsG0480018461.01 | MsG0880047038.01 | 0.846153 | 2.597948e-59 | 4.430078e-56 |
| MsG0480018461.01 | MsG0880047607.01 | 0.850223 | 1.951210e-60 | 3.795491e-57 |
| MsG0380015164.01 | MsG0480018461.01 | 0.800363 | 1.492464e-48 | 6.936325e-46 |
| MsG0380015779.01 | MsG0480018461.01 | 0.822638 | 2.128049e-53 | 1.791487e-50 |
| MsG0380015793.01 | MsG0480018461.01 | -0.812701 | 3.713480e-51 | 2.377537e-48 |
| MsG0380015831.01 | MsG0480018461.01 | 0.819250 | 1.281605e-52 | 9.810859e-50 |
| MsG0380016513.01 | MsG0480018461.01 | 0.801273 | 9.733324e-49 | 4.629011e-46 |
| MsG0380016971.01 | MsG0480018461.01 | 0.829328 | 5.472719e-55 | 5.584054e-52 |
| MsG0380017146.01 | MsG0480018461.01 | 0.815898 | 7.302720e-52 | 5.098366e-49 |
| MsG0380017864.01 | MsG0480018461.01 | 0.820867 | 5.465189e-53 | 4.376485e-50 |
| MsG0480018126.01 | MsG0480018461.01 | 0.816573 | 5.158963e-52 | 3.669016e-49 |
| MsG0480018163.01 | MsG0480018461.01 | 0.816985 | 4.170446e-52 | 2.999845e-49 |
| MsG0480018289.01 | MsG0480018461.01 | 0.874852 | 4.886007e-68 | 2.234118e-64 |
| MsG0280006523.01 | MsG0480018461.01 | 0.834310 | 3.228041e-56 | 3.816242e-53 |
| MsG0280006595.01 | MsG0480018461.01 | 0.816929 | 4.291671e-52 | 3.082217e-49 |
| MsG0280007071.01 | MsG0480018461.01 | 0.802600 | 5.194183e-49 | 2.554913e-46 |
| MsG0280007088.01 | MsG0480018461.01 | 0.805677 | 1.189251e-49 | 6.330644e-47 |
| MsG0280007089.01 | MsG0480018461.01 | 0.828656 | 7.963882e-55 | 7.966138e-52 |
| MsG0280007161.01 | MsG0480018461.01 | 0.822195 | 2.697290e-53 | 2.241929e-50 |
| MsG0280007609.01 | MsG0480018461.01 | 0.808977 | 2.375673e-50 | 1.377715e-47 |
| MsG0280007815.01 | MsG0480018461.01 | 0.802120 | 6.521508e-49 | 3.168728e-46 |
| MsG0280008037.01 | MsG0480018461.01 | 0.808336 | 3.256426e-50 | 1.857031e-47 |
| MsG0280008286.01 | MsG0480018461.01 | 0.819865 | 9.279232e-53 | 7.226241e-50 |
| MsG0280008327.01 | MsG0480018461.01 | 0.820671 | 6.064226e-53 | 4.829028e-50 |
| MsG0280008696.01 | MsG0480018461.01 | 0.813987 | 1.937704e-51 | 1.284314e-48 |
| MsG0280008885.01 | MsG0480018461.01 | 0.822817 | 1.933561e-53 | 1.635961e-50 |
| MsG0280009140.01 | MsG0480018461.01 | 0.815759 | 7.841169e-52 | 5.454207e-49 |
| MsG0280009716.01 | MsG0480018461.01 | 0.805963 | 1.035467e-49 | 5.552779e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180003984.01 | MsG0480018461.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018461.01.T01 | MTR_4g011930 | 93.750 | 448 | 17 | 2 | 1 | 448 | 1 | 437 | 0.0 | 760 |
| MsG0480018461.01.T01 | MTR_7g060890 | 51.748 | 143 | 25 | 1 | 1 | 143 | 1 | 99 | 2.05e-32 | 119 |
| MsG0480018461.01.T01 | MTR_3g032750 | 50.350 | 143 | 33 | 2 | 1 | 143 | 1 | 105 | 1.99e-31 | 122 |
| MsG0480018461.01.T01 | MTR_1g112060 | 76.136 | 88 | 19 | 1 | 1 | 86 | 115 | 202 | 3.65e-28 | 112 |
| MsG0480018461.01.T01 | MTR_4g014050 | 62.000 | 50 | 19 | 0 | 3 | 52 | 717 | 766 | 7.55e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018461.01.T01 | AT1G52380 | 46.300 | 473 | 194 | 15 | 1 | 447 | 1 | 439 | 3.76e-104 | 317 |
| MsG0480018461.01.T01 | AT1G52380 | 46.300 | 473 | 194 | 15 | 1 | 447 | 1 | 439 | 3.76e-104 | 317 |
| MsG0480018461.01.T01 | AT1G52380 | 46.300 | 473 | 194 | 15 | 1 | 447 | 1 | 439 | 3.76e-104 | 317 |
| MsG0480018461.01.T01 | AT1G52380 | 46.300 | 473 | 194 | 15 | 1 | 447 | 1 | 439 | 3.76e-104 | 317 |
| MsG0480018461.01.T01 | AT3G15970 | 42.355 | 484 | 222 | 15 | 1 | 447 | 1 | 464 | 7.18e-93 | 288 |
| MsG0480018461.01.T01 | AT3G15970 | 42.355 | 484 | 222 | 15 | 1 | 447 | 1 | 464 | 7.18e-93 | 288 |
Find 119 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATCTAACTCTGGAAGTTC+TGG | 0.270249 | 4:-5174802 | MsG0480018461.01.T01:CDS |
| TTCACAGGTCTTGTTGGGTC+TGG | 0.292666 | 4:-5174937 | MsG0480018461.01.T01:CDS |
| TGAAATGAAGCTCACAAATA+TGG | 0.293632 | 4:-5174524 | MsG0480018461.01.T01:CDS |
| ATATTTGTGAGCTTCATTTC+AGG | 0.313432 | 4:+5174526 | None:intergenic |
| CAGAGTTCTTATGAGGTCTA+AGG | 0.315667 | 4:-5174584 | MsG0480018461.01.T01:CDS |
| AACTCTGGAAGTTCTGGTTT+TGG | 0.315736 | 4:-5174796 | MsG0480018461.01.T01:CDS |
| TTGAAACCTGACCAGCCTTT+AGG | 0.324636 | 4:-5174832 | MsG0480018461.01.T01:CDS |
| AGTAGTAGCTTCACCAGATT+TGG | 0.330808 | 4:+5175422 | None:intergenic |
| TAAGAAGGAAGTTGCTGATA+AGG | 0.332879 | 4:-5175193 | MsG0480018461.01.T01:CDS |
| TGTTACTTTGACCATTCTTC+TGG | 0.332895 | 4:+5175518 | None:intergenic |
| CCTGACCAGCCTTTAGGTCT+TGG | 0.361060 | 4:-5174826 | MsG0480018461.01.T01:CDS |
| TCATCTTCCTCGTCGTCAAT+AGG | 0.362423 | 4:+5175594 | None:intergenic |
| TGTAGACCCGAAGGAAAATA+AGG | 0.369166 | 4:+5174903 | None:intergenic |
| TCTTCATCCTTAGCTTTCTC+TGG | 0.371345 | 4:+5175390 | None:intergenic |
| GAAGCCTTGGGTGAGTTCTC+TGG | 0.372271 | 4:+5174352 | None:intergenic |
| AACAAATGATGGGTCTACTT+TGG | 0.384601 | 4:-5174881 | MsG0480018461.01.T01:CDS |
| CGTATACCAGCGAAAGGGTT+TGG | 0.386213 | 4:+5175471 | None:intergenic |
| ACATCAGGAGCTTTGCTCTC+TGG | 0.390832 | 4:+5175357 | None:intergenic |
| ACTGAATCCACTGCCAAATC+TGG | 0.392593 | 4:-5175435 | MsG0480018461.01.T01:CDS |
| TCTACTTTGGGTAGTGGGTC+CGG | 0.396921 | 4:-5174868 | MsG0480018461.01.T01:CDS |
| TCTTGAAAGTCCCGGCTTCA+AGG | 0.403876 | 4:+5175565 | None:intergenic |
| TTCCTGCAGTGTTTCAGTCT+TGG | 0.406473 | 4:+5174750 | None:intergenic |
| GAGCGACAGTGACAACTCTA+AGG | 0.408430 | 4:-5175262 | MsG0480018461.01.T01:CDS |
| ATGCCTTCACAGGTCTTGTT+GGG | 0.412610 | 4:-5174942 | MsG0480018461.01.T01:CDS |
| AGCTCAAACATCAGAAGCCT+TGG | 0.419241 | 4:+5174339 | None:intergenic |
| CCTTACAGTCGTCAAAGAAA+AGG | 0.420646 | 4:-5175647 | MsG0480018461.01.T01:CDS |
| CCAAGACCTAAAGGCTGGTC+AGG | 0.423398 | 4:+5174826 | None:intergenic |
| ACAAATGATGGGTCTACTTT+GGG | 0.423993 | 4:-5174880 | MsG0480018461.01.T01:CDS |
| GGTTGGAAGGAACGTGGAAA+GGG | 0.429315 | 4:-5174649 | MsG0480018461.01.T01:CDS |
| TTTGCATTGAAGTTCAAAGA+TGG | 0.435158 | 4:-5174445 | MsG0480018461.01.T01:CDS |
| AATGCCTTCACAGGTCTTGT+TGG | 0.440022 | 4:-5174943 | MsG0480018461.01.T01:CDS |
| TATTTGTGAGCTTCATTTCA+GGG | 0.440319 | 4:+5174527 | None:intergenic |
| TTCGGGTCTACAACAAATGA+TGG | 0.442733 | 4:-5174892 | MsG0480018461.01.T01:CDS |
| AGGCAAGGAGCTTGCGGAGA+AGG | 0.452508 | 4:-5175286 | MsG0480018461.01.T01:CDS |
| GGTAGATAATGAACAGAGTA+AGG | 0.452713 | 4:-5175241 | MsG0480018461.01.T01:CDS |
| TCGTCAAAGAAAAGGGCTGC+TGG | 0.453932 | 4:-5175639 | MsG0480018461.01.T01:CDS |
| AGTAAGCGAAAGCAAGGATA+AGG | 0.460546 | 4:-5175040 | MsG0480018461.01.T01:CDS |
| AGTAAGTGAAAGCAAGGATA+AGG | 0.460546 | 4:-5175070 | MsG0480018461.01.T01:CDS |
| GATTGAAAATGAGGATAAGA+AGG | 0.464936 | 4:-5175208 | MsG0480018461.01.T01:CDS |
| GCTCACAAATATGGAGAAGA+AGG | 0.474042 | 4:-5174515 | MsG0480018461.01.T01:CDS |
| ATGACGCTGCCCTTGAAGCC+GGG | 0.474337 | 4:-5175575 | MsG0480018461.01.T01:CDS |
| GATGACGCTGCCCTTGAAGC+CGG | 0.476093 | 4:-5175576 | MsG0480018461.01.T01:CDS |
| ATGGGTCTACTTTGGGTAGT+GGG | 0.480263 | 4:-5174873 | MsG0480018461.01.T01:CDS |
| ACTGGCTTTCTTGAAAGTCC+CGG | 0.480603 | 4:+5175557 | None:intergenic |
| GGTTGCAAGAACCTCCTCAC+TGG | 0.485123 | 4:+5175539 | None:intergenic |
| AAATAGTGAAAGCAAGGATA+AGG | 0.486758 | 4:-5175100 | MsG0480018461.01.T01:CDS |
| CCCTTCAGTGGCACATGCAA+AGG | 0.487875 | 4:+5174486 | None:intergenic |
| GGTCTTGGTTTATCTAACTC+TGG | 0.494050 | 4:-5174811 | MsG0480018461.01.T01:CDS |
| AGGTTGGAAGGAACGTGGAA+AGG | 0.496279 | 4:-5174650 | MsG0480018461.01.T01:CDS |
| TTAGATAAACCAAGACCTAA+AGG | 0.499520 | 4:+5174817 | None:intergenic |
| GTAGATTTGTCCTCAACATC+AGG | 0.499844 | 4:+5175342 | None:intergenic |
| CAGGAAGTCGTCATAGAAAC+CGG | 0.499987 | 4:-5174733 | MsG0480018461.01.T01:CDS |
| CGTCGTCAATAGGAGTGTCT+CGG | 0.502212 | 4:+5175604 | None:intergenic |
| GCTGTTGAAATGATTTGAAA+GGG | 0.504844 | 4:+5174980 | None:intergenic |
| CTTACAGTCGTCAAAGAAAA+GGG | 0.505584 | 4:-5175646 | MsG0480018461.01.T01:CDS |
| GATGGGTCTACTTTGGGTAG+TGG | 0.506943 | 4:-5174874 | MsG0480018461.01.T01:CDS |
| TTGCATTGAAGTTCAAAGAT+GGG | 0.509535 | 4:-5174444 | MsG0480018461.01.T01:CDS |
| AGTCTTGAAATCCTCCACTA+TGG | 0.509950 | 4:+5174420 | None:intergenic |
| TTGGAGTAGATTTATTCTGT+TGG | 0.517375 | 4:+5175490 | None:intergenic |
| TTGAGTTTGCAGATGGAGGT+TGG | 0.519670 | 4:-5174666 | MsG0480018461.01.T01:CDS |
| TTGTTTGAGTTTGCAGATGG+AGG | 0.522768 | 4:-5174670 | MsG0480018461.01.T01:CDS |
| TGGACGTAAGATTGAAAATG+AGG | 0.525984 | 4:-5175217 | MsG0480018461.01.T01:CDS |
| GTCGTCAATAGGAGTGTCTC+GGG | 0.531300 | 4:+5175605 | None:intergenic |
| GTGTTGTTTGAGTTTGCAGA+TGG | 0.533735 | 4:-5174673 | MsG0480018461.01.T01:CDS |
| GCAGTGGATTCAGTAGGAGC+AGG | 0.533826 | 4:+5175444 | None:intergenic |
| CGGTGAAGAAAACGAGGAAG+TGG | 0.537379 | 4:-5174713 | MsG0480018461.01.T01:CDS |
| CTTGAAAGTCCCGGCTTCAA+GGG | 0.539539 | 4:+5175566 | None:intergenic |
| AGCTGTTGAAATGATTTGAA+AGG | 0.539560 | 4:+5174979 | None:intergenic |
| GTTTGCAGATGGAGGTTGGA+AGG | 0.542312 | 4:-5174662 | MsG0480018461.01.T01:CDS |
| AGCTTCACCAGATTTGGCAG+TGG | 0.542755 | 4:+5175428 | None:intergenic |
| GGTTCTTGCAACCAGAAGAA+TGG | 0.542934 | 4:-5175529 | MsG0480018461.01.T01:CDS |
| AGACAAAGTAAGTGAAAGCA+AGG | 0.543217 | 4:-5175076 | MsG0480018461.01.T01:CDS |
| GATAATGAACAGAGTAAGGA+TGG | 0.544320 | 4:-5175237 | MsG0480018461.01.T01:CDS |
| AACTAGTGGAACAGAAAAGA+AGG | 0.545059 | 4:-5174608 | MsG0480018461.01.T01:CDS |
| AAAGGGCCACCTTCAGCAGT+AGG | 0.547591 | 4:+5174997 | None:intergenic |
| AGCAATCAAAATGCCTTCAC+AGG | 0.548375 | 4:-5174952 | MsG0480018461.01.T01:CDS |
| GCTCAAACATCAGAAGCCTT+GGG | 0.548640 | 4:+5174340 | None:intergenic |
| AGACAAAGTAAGCGAAAGCA+AGG | 0.554995 | 4:-5175046 | MsG0480018461.01.T01:CDS |
| ATAAACCAAGACCTAAAGGC+TGG | 0.555593 | 4:+5174821 | None:intergenic |
| TTCCAAGACTGAAACACTGC+AGG | 0.563759 | 4:-5174752 | MsG0480018461.01.T01:CDS |
| CTTAGACCTCATAAGAACTC+TGG | 0.564260 | 4:+5174585 | None:intergenic |
| CGTCAAAGAAAAGGGCTGCT+GGG | 0.566029 | 4:-5175638 | MsG0480018461.01.T01:CDS |
| CAATGCAGGCAAGGAGCTTG+CGG | 0.566828 | 4:-5175292 | MsG0480018461.01.T01:CDS |
| AAGACGGTCTTTCCCTTCAG+TGG | 0.567228 | 4:+5174474 | None:intergenic |
| TCTACTCCAAACCCTTTCGC+TGG | 0.571206 | 4:-5175477 | MsG0480018461.01.T01:CDS |
| GGCAAGCGTATACCAGCGAA+AGG | 0.572904 | 4:+5175465 | None:intergenic |
| GACTGCTATCACAGCACACA+AGG | 0.572911 | 4:-5174401 | MsG0480018461.01.T01:CDS |
| GAGCAAAGCTCCTGATGTTG+AGG | 0.573315 | 4:-5175352 | MsG0480018461.01.T01:CDS |
| AGAGTTCTTATGAGGTCTAA+GGG | 0.575744 | 4:-5174583 | MsG0480018461.01.T01:CDS |
| CCTTTGCATGTGCCACTGAA+GGG | 0.575965 | 4:-5174486 | MsG0480018461.01.T01:CDS |
| GAACGGAAATAGTGAAAGCA+AGG | 0.577253 | 4:-5175106 | MsG0480018461.01.T01:CDS |
| AGAAGGCCAGAGTTCTTATG+AGG | 0.577595 | 4:-5174591 | MsG0480018461.01.T01:CDS |
| ACCTTTGCATGTGCCACTGA+AGG | 0.579423 | 4:-5174487 | MsG0480018461.01.T01:CDS |
| GTTCAAAGATGGGTCCATAG+TGG | 0.583030 | 4:-5174434 | MsG0480018461.01.T01:CDS |
| AGACCCAACAAGACCTGTGA+AGG | 0.595406 | 4:+5174939 | None:intergenic |
| GTGAAAGTGAATGTAACTAG+TGG | 0.595453 | 4:-5174622 | MsG0480018461.01.T01:CDS |
| TACTTCAAACAACGATGTTG+CGG | 0.596477 | 4:-5175322 | MsG0480018461.01.T01:CDS |
| AGTGACGAGCCTACTGCTGA+AGG | 0.599077 | 4:-5175006 | MsG0480018461.01.T01:CDS |
| GGACAGAAACAATGCAGGCA+AGG | 0.604459 | 4:-5175301 | MsG0480018461.01.T01:CDS |
| ATCATTTGTTGTAGACCCGA+AGG | 0.607405 | 4:+5174894 | None:intergenic |
| GTTGCTGATAAGGAGAGTGC+CGG | 0.608076 | 4:-5175183 | MsG0480018461.01.T01:CDS |
| TCAATGCAAATGTTGAAAGA+CGG | 0.609075 | 4:+5174458 | None:intergenic |
| TCGGGTCTACAACAAATGAT+GGG | 0.616965 | 4:-5174891 | MsG0480018461.01.T01:CDS |
| GACGAGCCTACTGCTGAAGG+TGG | 0.621305 | 4:-5175003 | MsG0480018461.01.T01:CDS |
| GTTGCGGACAGAAACAATGC+AGG | 0.625399 | 4:-5175306 | MsG0480018461.01.T01:CDS |
| GATTTGGCAGTGGATTCAGT+AGG | 0.625470 | 4:+5175438 | None:intergenic |
| CTCACAAATATGGAGAAGAA+GGG | 0.630174 | 4:-5174514 | MsG0480018461.01.T01:CDS |
| AACGCAGCCAGAGAAAGCTA+AGG | 0.632276 | 4:-5175397 | MsG0480018461.01.T01:CDS |
| TATCACAGCACACAAGGGTG+AGG | 0.638173 | 4:-5174395 | MsG0480018461.01.T01:CDS |
| CAAAGATGGGTCCATAGTGG+AGG | 0.639977 | 4:-5174431 | MsG0480018461.01.T01:CDS |
| GACTCCAGAGAACTCACCCA+AGG | 0.642983 | 4:-5174356 | MsG0480018461.01.T01:CDS |
| GCAAGCGTATACCAGCGAAA+GGG | 0.643938 | 4:+5175466 | None:intergenic |
| TTTCAAGAAAGCCAGTGAGG+AGG | 0.650952 | 4:-5175550 | MsG0480018461.01.T01:CDS |
| ACTGAGAACAGTGATAAGAA+CGG | 0.660347 | 4:-5175123 | MsG0480018461.01.T01:CDS |
| GACTTTCAAGAAAGCCAGTG+AGG | 0.667433 | 4:-5175553 | MsG0480018461.01.T01:CDS |
| GATGGAGGTTGGAAGGAACG+TGG | 0.668623 | 4:-5174655 | MsG0480018461.01.T01:CDS |
| AGAAACCGGTGAAGAAAACG+AGG | 0.713487 | 4:-5174719 | MsG0480018461.01.T01:CDS |
| ACTGCTATCACAGCACACAA+GGG | 0.723065 | 4:-5174400 | MsG0480018461.01.T01:CDS |
| AGACACTCCTATTGACGACG+AGG | 0.724010 | 4:-5175601 | MsG0480018461.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTTCAATCCAAAAATAGAAC+CGG | + | Chr4:5175162-5175181 | None:intergenic | 25.0% |
| !!! | TCAGTATTTTTTTCTTCTGT+AGG | + | Chr4:5174870-5174889 | None:intergenic | 25.0% |
| AAATAGTGAAAGCAAGGATA+AGG | - | Chr4:5174908-5174927 | MsG0480018461.01.T01:CDS | 30.0% | |
| AGCTGTTGAAATGATTTGAA+AGG | + | Chr4:5175032-5175051 | None:intergenic | 30.0% | |
| ATATTTGTGAGCTTCATTTC+AGG | + | Chr4:5175485-5175504 | None:intergenic | 30.0% | |
| GATTGAAAATGAGGATAAGA+AGG | - | Chr4:5174800-5174819 | MsG0480018461.01.T01:CDS | 30.0% | |
| GCTGTTGAAATGATTTGAAA+GGG | + | Chr4:5175031-5175050 | None:intergenic | 30.0% | |
| TATTTGTGAGCTTCATTTCA+GGG | + | Chr4:5175484-5175503 | None:intergenic | 30.0% | |
| TCAATGCAAATGTTGAAAGA+CGG | + | Chr4:5175553-5175572 | None:intergenic | 30.0% | |
| TGAAATGAAGCTCACAAATA+TGG | - | Chr4:5175484-5175503 | MsG0480018461.01.T01:CDS | 30.0% | |
| TTAGATAAACCAAGACCTAA+AGG | + | Chr4:5175194-5175213 | None:intergenic | 30.0% | |
| TTGCATTGAAGTTCAAAGAT+GGG | - | Chr4:5175564-5175583 | MsG0480018461.01.T01:CDS | 30.0% | |
| TTGGAGTAGATTTATTCTGT+TGG | + | Chr4:5174521-5174540 | None:intergenic | 30.0% | |
| TTTGCATTGAAGTTCAAAGA+TGG | - | Chr4:5175563-5175582 | MsG0480018461.01.T01:CDS | 30.0% | |
| !!! | GTATTTTTTTCTTCTGTAGG+AGG | + | Chr4:5174867-5174886 | None:intergenic | 30.0% |
| !!! | TCTTCTTCCTTATTTTCCTT+CGG | - | Chr4:5175098-5175117 | MsG0480018461.01.T01:CDS | 30.0% |
| AACTAGTGGAACAGAAAAGA+AGG | - | Chr4:5175400-5175419 | MsG0480018461.01.T01:CDS | 35.0% | |
| ACTGAGAACAGTGATAAGAA+CGG | - | Chr4:5174885-5174904 | MsG0480018461.01.T01:CDS | 35.0% | |
| AGACAAAGTAAGTGAAAGCA+AGG | - | Chr4:5174932-5174951 | MsG0480018461.01.T01:CDS | 35.0% | |
| AGAGTTCTTATGAGGTCTAA+GGG | - | Chr4:5175425-5175444 | MsG0480018461.01.T01:CDS | 35.0% | |
| AGTAAGTGAAAGCAAGGATA+AGG | - | Chr4:5174938-5174957 | MsG0480018461.01.T01:CDS | 35.0% | |
| CTCACAAATATGGAGAAGAA+GGG | - | Chr4:5175494-5175513 | MsG0480018461.01.T01:CDS | 35.0% | |
| CTTACAGTCGTCAAAGAAAA+GGG | - | Chr4:5174362-5174381 | MsG0480018461.01.T01:CDS | 35.0% | |
| GATAATGAACAGAGTAAGGA+TGG | - | Chr4:5174771-5174790 | MsG0480018461.01.T01:CDS | 35.0% | |
| GGTAGATAATGAACAGAGTA+AGG | - | Chr4:5174767-5174786 | MsG0480018461.01.T01:CDS | 35.0% | |
| GTGAAAGTGAATGTAACTAG+TGG | - | Chr4:5175386-5175405 | MsG0480018461.01.T01:CDS | 35.0% | |
| TAAGAAGGAAGTTGCTGATA+AGG | - | Chr4:5174815-5174834 | MsG0480018461.01.T01:CDS | 35.0% | |
| TACTTCAAACAACGATGTTG+CGG | - | Chr4:5174686-5174705 | MsG0480018461.01.T01:CDS | 35.0% | |
| TGGACGTAAGATTGAAAATG+AGG | - | Chr4:5174791-5174810 | MsG0480018461.01.T01:CDS | 35.0% | |
| ! | TTATCTAACTCTGGAAGTTC+TGG | - | Chr4:5175206-5175225 | MsG0480018461.01.T01:CDS | 35.0% |
| !! | AACAAATGATGGGTCTACTT+TGG | - | Chr4:5175127-5175146 | MsG0480018461.01.T01:CDS | 35.0% |
| !! | ACAAATGATGGGTCTACTTT+GGG | - | Chr4:5175128-5175147 | MsG0480018461.01.T01:CDS | 35.0% |
| !! | TGTTACTTTGACCATTCTTC+TGG | + | Chr4:5174493-5174512 | None:intergenic | 35.0% |
| !!! | CTTCTTCCTTATTTTCCTTC+GGG | - | Chr4:5175099-5175118 | MsG0480018461.01.T01:CDS | 35.0% |
| AGACAAAGTAAGCGAAAGCA+AGG | - | Chr4:5174962-5174981 | MsG0480018461.01.T01:CDS | 40.0% | |
| AGCAATCAAAATGCCTTCAC+AGG | - | Chr4:5175056-5175075 | MsG0480018461.01.T01:CDS | 40.0% | |
| AGTAAGCGAAAGCAAGGATA+AGG | - | Chr4:5174968-5174987 | MsG0480018461.01.T01:CDS | 40.0% | |
| AGTAGTAGCTTCACCAGATT+TGG | + | Chr4:5174589-5174608 | None:intergenic | 40.0% | |
| AGTCTTGAAATCCTCCACTA+TGG | + | Chr4:5175591-5175610 | None:intergenic | 40.0% | |
| ATAAACCAAGACCTAAAGGC+TGG | + | Chr4:5175190-5175209 | None:intergenic | 40.0% | |
| CAGAGTTCTTATGAGGTCTA+AGG | - | Chr4:5175424-5175443 | MsG0480018461.01.T01:CDS | 40.0% | |
| CCTTACAGTCGTCAAAGAAA+AGG | - | Chr4:5174361-5174380 | MsG0480018461.01.T01:CDS | 40.0% | |
| CTTAGACCTCATAAGAACTC+TGG | + | Chr4:5175426-5175445 | None:intergenic | 40.0% | |
| GAACGGAAATAGTGAAAGCA+AGG | - | Chr4:5174902-5174921 | MsG0480018461.01.T01:CDS | 40.0% | |
| GCTCACAAATATGGAGAAGA+AGG | - | Chr4:5175493-5175512 | MsG0480018461.01.T01:CDS | 40.0% | |
| GGTCTTGGTTTATCTAACTC+TGG | - | Chr4:5175197-5175216 | MsG0480018461.01.T01:CDS | 40.0% | |
| GTAGATTTGTCCTCAACATC+AGG | + | Chr4:5174669-5174688 | None:intergenic | 40.0% | |
| TCGGGTCTACAACAAATGAT+GGG | - | Chr4:5175117-5175136 | MsG0480018461.01.T01:CDS | 40.0% | |
| TGTAGACCCGAAGGAAAATA+AGG | + | Chr4:5175108-5175127 | None:intergenic | 40.0% | |
| TTCGGGTCTACAACAAATGA+TGG | - | Chr4:5175116-5175135 | MsG0480018461.01.T01:CDS | 40.0% | |
| ! | CCTTTTCTTTGACGACTGTA+AGG | + | Chr4:5174364-5174383 | None:intergenic | 40.0% |
| ! | TCTTCATCCTTAGCTTTCTC+TGG | + | Chr4:5174621-5174640 | None:intergenic | 40.0% |
| ! | TTGTTTGAGTTTGCAGATGG+AGG | - | Chr4:5175338-5175357 | MsG0480018461.01.T01:CDS | 40.0% |
| !! | ATCATTTGTTGTAGACCCGA+AGG | + | Chr4:5175117-5175136 | None:intergenic | 40.0% |
| !! | GTGTTGTTTGAGTTTGCAGA+TGG | - | Chr4:5175335-5175354 | MsG0480018461.01.T01:CDS | 40.0% |
| !!! | AACTCTGGAAGTTCTGGTTT+TGG | - | Chr4:5175212-5175231 | MsG0480018461.01.T01:CDS | 40.0% |
| !!! | AGGTTCTTTTTCGATCTCAC+CGG | + | Chr4:5174847-5174866 | None:intergenic | 40.0% |
| !!! | AGTTCTGGTTTTGGAACATC+AGG | - | Chr4:5175221-5175240 | MsG0480018461.01.T01:CDS | 40.0% |
| ACTGAATCCACTGCCAAATC+TGG | - | Chr4:5174573-5174592 | MsG0480018461.01.T01:CDS | 45.0% | |
| ACTGCTATCACAGCACACAA+GGG | - | Chr4:5175608-5175627 | MsG0480018461.01.T01:CDS | 45.0% | |
| AGAAACCGGTGAAGAAAACG+AGG | - | Chr4:5175289-5175308 | MsG0480018461.01.T01:CDS | 45.0% | |
| AGAAGGCCAGAGTTCTTATG+AGG | - | Chr4:5175417-5175436 | MsG0480018461.01.T01:CDS | 45.0% | |
| ATGGGTCTACTTTGGGTAGT+GGG | - | Chr4:5175135-5175154 | MsG0480018461.01.T01:CDS | 45.0% | |
| CAGGAAGTCGTCATAGAAAC+CGG | - | Chr4:5175275-5175294 | MsG0480018461.01.T01:CDS | 45.0% | |
| GACTTTCAAGAAAGCCAGTG+AGG | - | Chr4:5174455-5174474 | MsG0480018461.01.T01:CDS | 45.0% | |
| GGTTCTTGCAACCAGAAGAA+TGG | - | Chr4:5174479-5174498 | MsG0480018461.01.T01:CDS | 45.0% | |
| GTTCAAAGATGGGTCCATAG+TGG | - | Chr4:5175574-5175593 | MsG0480018461.01.T01:CDS | 45.0% | |
| TCATCTTCCTCGTCGTCAAT+AGG | + | Chr4:5174417-5174436 | None:intergenic | 45.0% | |
| TTCCAAGACTGAAACACTGC+AGG | - | Chr4:5175256-5175275 | MsG0480018461.01.T01:CDS | 45.0% | |
| TTCCTGCAGTGTTTCAGTCT+TGG | + | Chr4:5175261-5175280 | None:intergenic | 45.0% | |
| TTGAAACCTGACCAGCCTTT+AGG | - | Chr4:5175176-5175195 | MsG0480018461.01.T01:CDS | 45.0% | |
| TTGAGTTTGCAGATGGAGGT+TGG | - | Chr4:5175342-5175361 | MsG0480018461.01.T01:CDS | 45.0% | |
| TTTCAAGAAAGCCAGTGAGG+AGG | - | Chr4:5174458-5174477 | MsG0480018461.01.T01:CDS | 45.0% | |
| ! | AATGCCTTCACAGGTCTTGT+TGG | - | Chr4:5175065-5175084 | MsG0480018461.01.T01:CDS | 45.0% |
| ! | AGTGGGTCCGGTTCTATTTT+TGG | - | Chr4:5175152-5175171 | MsG0480018461.01.T01:CDS | 45.0% |
| ! | CACTTCCTCGTTTTCTTCAC+CGG | + | Chr4:5175297-5175316 | None:intergenic | 45.0% |
| ! | GATTTGGCAGTGGATTCAGT+AGG | + | Chr4:5174573-5174592 | None:intergenic | 45.0% |
| !! | ACTGGCTTTCTTGAAAGTCC+CGG | + | Chr4:5174454-5174473 | None:intergenic | 45.0% |
| !! | ATGCCTTCACAGGTCTTGTT+GGG | - | Chr4:5175066-5175085 | MsG0480018461.01.T01:CDS | 45.0% |
| AACGCAGCCAGAGAAAGCTA+AGG | - | Chr4:5174611-5174630 | MsG0480018461.01.T01:CDS | 50.0% | |
| AAGACGGTCTTTCCCTTCAG+TGG | + | Chr4:5175537-5175556 | None:intergenic | 50.0% | |
| ACATCAGGAGCTTTGCTCTC+TGG | + | Chr4:5174654-5174673 | None:intergenic | 50.0% | |
| AGACACTCCTATTGACGACG+AGG | - | Chr4:5174407-5174426 | MsG0480018461.01.T01:CDS | 50.0% | |
| AGACCCAACAAGACCTGTGA+AGG | + | Chr4:5175072-5175091 | None:intergenic | 50.0% | |
| AGCTTCACCAGATTTGGCAG+TGG | + | Chr4:5174583-5174602 | None:intergenic | 50.0% | |
| AGGTTGGAAGGAACGTGGAA+AGG | - | Chr4:5175358-5175377 | MsG0480018461.01.T01:CDS | 50.0% | |
| CAAAGATGGGTCCATAGTGG+AGG | - | Chr4:5175577-5175596 | MsG0480018461.01.T01:CDS | 50.0% | |
| CGGTGAAGAAAACGAGGAAG+TGG | - | Chr4:5175295-5175314 | MsG0480018461.01.T01:CDS | 50.0% | |
| CGTATACCAGCGAAAGGGTT+TGG | + | Chr4:5174540-5174559 | None:intergenic | 50.0% | |
| CGTCAAAGAAAAGGGCTGCT+GGG | - | Chr4:5174370-5174389 | MsG0480018461.01.T01:CDS | 50.0% | |
| CTTGAAAGTCCCGGCTTCAA+GGG | + | Chr4:5174445-5174464 | None:intergenic | 50.0% | |
| GACTGCTATCACAGCACACA+AGG | - | Chr4:5175607-5175626 | MsG0480018461.01.T01:CDS | 50.0% | |
| GAGCAAAGCTCCTGATGTTG+AGG | - | Chr4:5174656-5174675 | MsG0480018461.01.T01:CDS | 50.0% | |
| GAGCGACAGTGACAACTCTA+AGG | - | Chr4:5174746-5174765 | MsG0480018461.01.T01:CDS | 50.0% | |
| GATGGGTCTACTTTGGGTAG+TGG | - | Chr4:5175134-5175153 | MsG0480018461.01.T01:CDS | 50.0% | |
| GCAAGCGTATACCAGCGAAA+GGG | + | Chr4:5174545-5174564 | None:intergenic | 50.0% | |
| GGACAGAAACAATGCAGGCA+AGG | - | Chr4:5174707-5174726 | MsG0480018461.01.T01:CDS | 50.0% | |
| GGTTGGAAGGAACGTGGAAA+GGG | - | Chr4:5175359-5175378 | MsG0480018461.01.T01:CDS | 50.0% | |
| GTTGCGGACAGAAACAATGC+AGG | - | Chr4:5174702-5174721 | MsG0480018461.01.T01:CDS | 50.0% | |
| GTTTGCAGATGGAGGTTGGA+AGG | - | Chr4:5175346-5175365 | MsG0480018461.01.T01:CDS | 50.0% | |
| TATCACAGCACACAAGGGTG+AGG | - | Chr4:5175613-5175632 | MsG0480018461.01.T01:CDS | 50.0% | |
| TCGTCAAAGAAAAGGGCTGC+TGG | - | Chr4:5174369-5174388 | MsG0480018461.01.T01:CDS | 50.0% | |
| TCTACTCCAAACCCTTTCGC+TGG | - | Chr4:5174531-5174550 | MsG0480018461.01.T01:CDS | 50.0% | |
| TCTTGAAAGTCCCGGCTTCA+AGG | + | Chr4:5174446-5174465 | None:intergenic | 50.0% | |
| ! | ACCTTTGCATGTGCCACTGA+AGG | - | Chr4:5175521-5175540 | MsG0480018461.01.T01:CDS | 50.0% |
| ! | CCTTTGCATGTGCCACTGAA+GGG | - | Chr4:5175522-5175541 | MsG0480018461.01.T01:CDS | 50.0% |
| ! | GTTGCTGATAAGGAGAGTGC+CGG | - | Chr4:5174825-5174844 | MsG0480018461.01.T01:CDS | 50.0% |
| !! | CGTCGTCAATAGGAGTGTCT+CGG | + | Chr4:5174407-5174426 | None:intergenic | 50.0% |
| !! | GTCGTCAATAGGAGTGTCTC+GGG | + | Chr4:5174406-5174425 | None:intergenic | 50.0% |
| !! | TCTACTTTGGGTAGTGGGTC+CGG | - | Chr4:5175140-5175159 | MsG0480018461.01.T01:CDS | 50.0% |
| !! | TTCACAGGTCTTGTTGGGTC+TGG | - | Chr4:5175071-5175090 | MsG0480018461.01.T01:CDS | 50.0% |
| AAAGGGCCACCTTCAGCAGT+AGG | + | Chr4:5175014-5175033 | None:intergenic | 55.0% | |
| AGTGACGAGCCTACTGCTGA+AGG | - | Chr4:5175002-5175021 | MsG0480018461.01.T01:CDS | 55.0% | |
| CAATGCAGGCAAGGAGCTTG+CGG | - | Chr4:5174716-5174735 | MsG0480018461.01.T01:CDS | 55.0% | |
| CCCTTCAGTGGCACATGCAA+AGG | + | Chr4:5175525-5175544 | None:intergenic | 55.0% | |
| CCTGACCAGCCTTTAGGTCT+TGG | - | Chr4:5175182-5175201 | MsG0480018461.01.T01:CDS | 55.0% | |
| GAAGCCTTGGGTGAGTTCTC+TGG | + | Chr4:5175659-5175678 | None:intergenic | 55.0% | |
| GACTCCAGAGAACTCACCCA+AGG | - | Chr4:5175652-5175671 | MsG0480018461.01.T01:CDS | 55.0% | |
| GATGGAGGTTGGAAGGAACG+TGG | - | Chr4:5175353-5175372 | MsG0480018461.01.T01:CDS | 55.0% | |
| GGCAAGCGTATACCAGCGAA+AGG | + | Chr4:5174546-5174565 | None:intergenic | 55.0% | |
| GGTTGCAAGAACCTCCTCAC+TGG | + | Chr4:5174472-5174491 | None:intergenic | 55.0% | |
| ! | CCAAGACCTAAAGGCTGGTC+AGG | + | Chr4:5175185-5175204 | None:intergenic | 55.0% |
| ! | GCAGTGGATTCAGTAGGAGC+AGG | + | Chr4:5174567-5174586 | None:intergenic | 55.0% |
| AGGCAAGGAGCTTGCGGAGA+AGG | - | Chr4:5174722-5174741 | MsG0480018461.01.T01:CDS | 60.0% | |
| ATGACGCTGCCCTTGAAGCC+GGG | - | Chr4:5174433-5174452 | MsG0480018461.01.T01:CDS | 60.0% | |
| GACGAGCCTACTGCTGAAGG+TGG | - | Chr4:5175005-5175024 | MsG0480018461.01.T01:CDS | 60.0% | |
| GATGACGCTGCCCTTGAAGC+CGG | - | Chr4:5174432-5174451 | MsG0480018461.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 5174342 | 5175688 | 5174342 | ID=MsG0480018461.01;Name=MsG0480018461.01 |
| Chr4 | mRNA | 5174342 | 5175688 | 5174342 | ID=MsG0480018461.01.T01;Parent=MsG0480018461.01;Name=MsG0480018461.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|448 |
| Chr4 | exon | 5174342 | 5175688 | 5174342 | ID=MsG0480018461.01.T01:exon:1891;Parent=MsG0480018461.01.T01 |
| Chr4 | CDS | 5174342 | 5175688 | 5174342 | ID=MsG0480018461.01.T01:cds;Parent=MsG0480018461.01.T01 |
| Gene Sequence |
| Protein sequence |
