Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006720.01.T01 | XP_013462513.1 | 98.533 | 409 | 5 | 1 | 88 | 496 | 1368 | 1775 | 0 | 822 |
MsG0280006720.01.T01 | XP_013462513.1 | 98.795 | 83 | 1 | 0 | 1 | 83 | 1013 | 1095 | 3.05E-43 | 176 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006720.01.T01 | Q9S9U0 | 72.127 | 409 | 113 | 1 | 88 | 496 | 1361 | 1768 | 0 | 610 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006720.01.T01 | A0A072V5B8 | 98.533 | 409 | 5 | 1 | 88 | 496 | 1368 | 1775 | 0.0 | 822 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180004099.01 | MsG0280006720.01 | 0.812291 | 4.565764e-51 | 2.891623e-48 |
MsG0180004389.01 | MsG0280006720.01 | 0.805758 | 1.143652e-49 | 6.100831e-47 |
MsG0180005575.01 | MsG0280006720.01 | 0.808988 | 2.362626e-50 | 1.370549e-47 |
MsG0180006000.01 | MsG0280006720.01 | 0.849400 | 3.312487e-60 | 6.271743e-57 |
MsG0280006299.01 | MsG0280006720.01 | 0.803555 | 3.296716e-49 | 1.661765e-46 |
MsG0280006720.01 | MsG0280007955.01 | 0.810094 | 1.367558e-50 | 8.169261e-48 |
MsG0280006720.01 | MsG0280010015.01 | 0.807567 | 4.745085e-50 | 2.651747e-47 |
MsG0280006720.01 | MsG0380015631.01 | 0.800025 | 1.749140e-48 | 8.059339e-46 |
MsG0280006720.01 | MsG0380015751.01 | 0.834963 | 2.211039e-56 | 2.665716e-53 |
MsG0280006720.01 | MsG0380016517.01 | 0.827787 | 1.290011e-54 | 1.258000e-51 |
MsG0280006720.01 | MsG0380016920.01 | 0.831798 | 1.360629e-55 | 1.492591e-52 |
MsG0280006720.01 | MsG0380018045.01 | 0.800490 | 1.406429e-48 | 6.557376e-46 |
MsG0280006720.01 | MsG0480021491.01 | 0.820141 | 8.024198e-53 | 6.297587e-50 |
MsG0280006720.01 | MsG0480022164.01 | 0.818259 | 2.151806e-52 | 1.602682e-49 |
MsG0280006720.01 | MsG0480022796.01 | 0.816393 | 5.660932e-52 | 4.006268e-49 |
MsG0280006720.01 | MsG0480023202.01 | 0.816274 | 6.016881e-52 | 4.244597e-49 |
MsG0280006720.01 | MsG0480023535.01 | 0.806348 | 8.591427e-50 | 4.652445e-47 |
MsG0280006720.01 | MsG0580024038.01 | 0.803036 | 4.222108e-49 | 2.099868e-46 |
MsG0280006720.01 | MsG0580024981.01 | 0.808159 | 3.552499e-50 | 2.016432e-47 |
MsG0280006720.01 | MsG0580027031.01 | 0.812078 | 5.081080e-51 | 3.199317e-48 |
MsG0280006720.01 | MsG0680034853.01 | 0.811732 | 6.043871e-51 | 3.770386e-48 |
MsG0280006720.01 | MsG0680035346.01 | 0.815036 | 1.135700e-51 | 7.744431e-49 |
MsG0280006720.01 | MsG0780037918.01 | 0.830737 | 2.481910e-55 | 2.637947e-52 |
MsG0280006720.01 | MsG0780037942.01 | 0.840591 | 7.931729e-58 | 1.135132e-54 |
MsG0280006720.01 | MsG0780038401.01 | 0.800740 | 1.250664e-48 | 5.868180e-46 |
MsG0280006720.01 | MsG0780039866.01 | 0.828102 | 1.083515e-54 | 1.066493e-51 |
MsG0280006720.01 | MsG0780040057.01 | 0.827574 | 1.451172e-54 | 1.406377e-51 |
MsG0280006720.01 | MsG0780040896.01 | 0.808119 | 3.622701e-50 | 2.054063e-47 |
MsG0280006720.01 | MsG0880042380.01 | 0.806125 | 9.572369e-50 | 5.154437e-47 |
MsG0280006720.01 | MsG0880043614.01 | 0.817142 | 3.844214e-52 | 2.776924e-49 |
MsG0280006720.01 | MsG0880046649.01 | 0.801478 | 8.836783e-49 | 4.224399e-46 |
MsG0280006720.01 | MsG0880047220.01 | 0.801523 | 8.648172e-49 | 4.138972e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006720.01.T01 | MTR_2g013580 | 98.533 | 409 | 5 | 1 | 88 | 496 | 1368 | 1775 | 0.0 | 822 |
MsG0280006720.01.T01 | MTR_2g013580 | 98.795 | 83 | 1 | 0 | 1 | 83 | 1013 | 1095 | 3.69e-47 | 176 |
MsG0280006720.01.T01 | MTR_4g078220 | 75.490 | 408 | 99 | 1 | 88 | 495 | 1355 | 1761 | 0.0 | 644 |
MsG0280006720.01.T01 | MTR_4g078220 | 50.602 | 83 | 37 | 1 | 1 | 83 | 1004 | 1082 | 6.10e-13 | 72.0 |
MsG0280006720.01.T01 | MTR_2g090375 | 67.482 | 409 | 89 | 3 | 88 | 495 | 1345 | 1710 | 0.0 | 553 |
MsG0280006720.01.T01 | MTR_2g090375 | 57.447 | 47 | 20 | 0 | 41 | 87 | 1028 | 1074 | 7.90e-11 | 65.5 |
MsG0280006720.01.T01 | MTR_3g075180 | 49.756 | 410 | 200 | 4 | 88 | 495 | 1499 | 1904 | 1.80e-129 | 414 |
MsG0280006720.01.T01 | MTR_8g093630 | 46.341 | 410 | 217 | 2 | 88 | 495 | 1529 | 1937 | 1.12e-123 | 398 |
MsG0280006720.01.T01 | MTR_3g096200 | 46.829 | 410 | 215 | 2 | 88 | 495 | 1519 | 1927 | 1.94e-122 | 394 |
MsG0280006720.01.T01 | MTR_7g005950 | 46.715 | 411 | 215 | 3 | 88 | 495 | 1541 | 1950 | 1.36e-121 | 392 |
MsG0280006720.01.T01 | MTR_2g061380 | 44.499 | 409 | 224 | 2 | 88 | 494 | 1531 | 1938 | 8.09e-116 | 375 |
MsG0280006720.01.T01 | MTR_3g047390 | 47.445 | 411 | 213 | 2 | 88 | 496 | 1495 | 1904 | 2.49e-114 | 371 |
MsG0280006720.01.T01 | MTR_1g116470 | 47.912 | 407 | 206 | 4 | 88 | 492 | 1493 | 1895 | 6.08e-112 | 364 |
MsG0280006720.01.T01 | MTR_1g116470 | 47.912 | 407 | 206 | 4 | 88 | 492 | 1488 | 1890 | 7.04e-112 | 364 |
MsG0280006720.01.T01 | MTR_2g072160 | 43.171 | 410 | 229 | 3 | 88 | 495 | 1539 | 1946 | 6.35e-110 | 358 |
MsG0280006720.01.T01 | MTR_1g116370 | 46.229 | 411 | 218 | 2 | 88 | 496 | 1525 | 1934 | 1.20e-109 | 358 |
MsG0280006720.01.T01 | MTR_3g075180 | 49.435 | 354 | 173 | 4 | 88 | 439 | 1501 | 1850 | 7.98e-108 | 352 |
MsG0280006720.01.T01 | MTR_7g005950 | 46.746 | 338 | 176 | 3 | 88 | 422 | 1541 | 1877 | 2.87e-96 | 319 |
MsG0280006720.01.T01 | MTR_1g101740 | 39.655 | 406 | 226 | 6 | 93 | 495 | 1 | 390 | 4.88e-86 | 270 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280006720.01.T01 | AT4G04970 | 72.127 | 409 | 113 | 1 | 88 | 496 | 1361 | 1768 | 0.0 | 610 |
MsG0280006720.01.T01 | AT4G04970 | 46.154 | 91 | 40 | 4 | 1 | 87 | 1007 | 1092 | 1.58e-13 | 73.9 |
MsG0280006720.01.T01 | AT4G03550 | 69.512 | 410 | 122 | 3 | 88 | 495 | 1368 | 1776 | 0.0 | 596 |
MsG0280006720.01.T01 | AT1G06490 | 48.537 | 410 | 208 | 2 | 88 | 495 | 1518 | 1926 | 3.91e-123 | 396 |
MsG0280006720.01.T01 | AT1G06490 | 48.537 | 410 | 208 | 2 | 88 | 495 | 1518 | 1926 | 4.74e-123 | 396 |
MsG0280006720.01.T01 | AT2G36850 | 48.293 | 410 | 206 | 4 | 88 | 495 | 1495 | 1900 | 1.74e-122 | 394 |
MsG0280006720.01.T01 | AT3G59100 | 48.780 | 410 | 207 | 2 | 88 | 495 | 1209 | 1617 | 2.93e-121 | 389 |
MsG0280006720.01.T01 | AT3G59100 | 48.780 | 410 | 207 | 2 | 88 | 495 | 1506 | 1914 | 6.37e-121 | 390 |
MsG0280006720.01.T01 | AT1G05570 | 46.959 | 411 | 214 | 3 | 88 | 495 | 1533 | 1942 | 1.02e-119 | 387 |
MsG0280006720.01.T01 | AT1G05570 | 46.959 | 411 | 214 | 3 | 88 | 495 | 1533 | 1942 | 1.02e-119 | 387 |
MsG0280006720.01.T01 | AT1G05570 | 46.959 | 411 | 214 | 3 | 88 | 495 | 1533 | 1942 | 1.02e-119 | 387 |
MsG0280006720.01.T01 | AT1G05570 | 46.959 | 411 | 214 | 3 | 88 | 495 | 1492 | 1901 | 1.06e-119 | 387 |
MsG0280006720.01.T01 | AT3G14570 | 48.049 | 410 | 210 | 2 | 88 | 495 | 1566 | 1974 | 1.50e-119 | 386 |
MsG0280006720.01.T01 | AT3G14570 | 48.049 | 410 | 210 | 2 | 88 | 495 | 1540 | 1948 | 1.52e-119 | 386 |
MsG0280006720.01.T01 | AT3G14570 | 48.049 | 410 | 210 | 2 | 88 | 495 | 1550 | 1958 | 1.55e-119 | 386 |
MsG0280006720.01.T01 | AT2G31960 | 46.229 | 411 | 217 | 3 | 88 | 495 | 1492 | 1901 | 3.25e-117 | 379 |
MsG0280006720.01.T01 | AT2G31960 | 46.229 | 411 | 217 | 3 | 88 | 495 | 1533 | 1942 | 5.36e-117 | 379 |
MsG0280006720.01.T01 | AT2G31960 | 46.229 | 411 | 217 | 3 | 88 | 495 | 1533 | 1942 | 5.36e-117 | 379 |
MsG0280006720.01.T01 | AT2G31960 | 46.229 | 411 | 217 | 3 | 88 | 495 | 1533 | 1942 | 5.36e-117 | 379 |
MsG0280006720.01.T01 | AT2G31960 | 46.229 | 411 | 217 | 3 | 88 | 495 | 1533 | 1942 | 5.36e-117 | 379 |
MsG0280006720.01.T01 | AT3G07160 | 47.666 | 407 | 207 | 4 | 88 | 492 | 1481 | 1883 | 2.66e-114 | 371 |
MsG0280006720.01.T01 | AT3G07160 | 47.666 | 407 | 207 | 4 | 88 | 492 | 1483 | 1885 | 2.78e-114 | 371 |
MsG0280006720.01.T01 | AT3G07160 | 47.666 | 407 | 207 | 4 | 88 | 492 | 1483 | 1885 | 2.78e-114 | 371 |
MsG0280006720.01.T01 | AT2G13680 | 46.265 | 415 | 215 | 3 | 88 | 495 | 1508 | 1921 | 9.35e-112 | 364 |
MsG0280006720.01.T01 | AT5G36870 | 44.769 | 411 | 214 | 6 | 88 | 495 | 1463 | 1863 | 3.04e-108 | 354 |
MsG0280006720.01.T01 | AT5G36870 | 44.769 | 411 | 214 | 6 | 88 | 495 | 1462 | 1862 | 3.19e-108 | 354 |
MsG0280006720.01.T01 | AT5G36870 | 44.769 | 411 | 214 | 6 | 88 | 495 | 1455 | 1855 | 4.34e-108 | 353 |
MsG0280006720.01.T01 | AT5G36870 | 44.769 | 411 | 214 | 6 | 88 | 495 | 1455 | 1855 | 4.34e-108 | 353 |
MsG0280006720.01.T01 | AT5G13000 | 44.878 | 410 | 223 | 2 | 88 | 495 | 1539 | 1947 | 6.62e-108 | 353 |
MsG0280006720.01.T01 | AT5G13000 | 43.902 | 410 | 206 | 3 | 88 | 495 | 1519 | 1906 | 1.67e-98 | 326 |
MsG0280006720.01.T01 | AT5G36870 | 48.945 | 237 | 109 | 5 | 88 | 322 | 1455 | 1681 | 4.76e-62 | 220 |
Find 116 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTGTTGCTAGCATTGTTT+TGG | 0.201377 | 2:-5353133 | None:intergenic |
CGACTCTATGATTTACTGTT+TGG | 0.255019 | 2:+5354157 | MsG0280006720.01.T01:CDS |
TTCTTGGGGCCGACTTTATA+TGG | 0.257635 | 2:+5353085 | MsG0280006720.01.T01:CDS |
GTTCAATGGCCTTGACAAAA+TGG | 0.260476 | 2:-5353451 | None:intergenic |
TCTAGTAATTGTCCTCTTAC+TGG | 0.261799 | 2:+5353991 | MsG0280006720.01.T01:CDS |
ATGACAGTCTATGCCTTTCT+TGG | 0.279413 | 2:+5353069 | MsG0280006720.01.T01:intron |
GGAACTCGCACCCATTTCTT+TGG | 0.290273 | 2:+5353326 | MsG0280006720.01.T01:CDS |
ATTGGTTTCTTGTAGTTTCA+TGG | 0.301432 | 2:+5353555 | MsG0280006720.01.T01:CDS |
TAGCTATGACACTCTCAAAT+TGG | 0.304119 | 2:+5353537 | MsG0280006720.01.T01:CDS |
ACTGTTTGGGATTATTGTTA+TGG | 0.331143 | 2:+5354171 | MsG0280006720.01.T01:CDS |
TTATTCAAGGGAGATGAATA+TGG | 0.342879 | 2:+5352166 | MsG0280006720.01.T01:CDS |
TCCGAGCATATTACTTCATA+TGG | 0.347865 | 2:+5352049 | MsG0280006720.01.T01:CDS |
AGTGCAGCTTCTTGTGATTA+TGG | 0.348777 | 2:+5353961 | MsG0280006720.01.T01:CDS |
GCATATGCACGGGATAAATA+TGG | 0.350894 | 2:+5353911 | MsG0280006720.01.T01:CDS |
ACGGGTTCCTTCCTGCAGTA+TGG | 0.356110 | 2:+5353246 | MsG0280006720.01.T01:CDS |
TTTGGTCGGACTATACTTCA+TGG | 0.361863 | 2:+5353344 | MsG0280006720.01.T01:CDS |
GACTCTATGATTTACTGTTT+GGG | 0.366360 | 2:+5354158 | MsG0280006720.01.T01:CDS |
TGACAGTCTATGCCTTTCTT+GGG | 0.367281 | 2:+5353070 | MsG0280006720.01.T01:intron |
TCAATCCCTCCGGATTTGAT+TGG | 0.370135 | 2:+5353597 | MsG0280006720.01.T01:CDS |
AAGACTTTGTGAATTGGATT+TGG | 0.377776 | 2:+5353642 | MsG0280006720.01.T01:CDS |
TGTGAATTGGATTTGGTATC+CGG | 0.383481 | 2:+5353649 | MsG0280006720.01.T01:CDS |
CTTGCTGTCATGGATATTCA+TGG | 0.390791 | 2:+5353859 | MsG0280006720.01.T01:CDS |
TCCGGGTGGGCCGTTCAAAA+AGG | 0.399121 | 2:+5353667 | MsG0280006720.01.T01:CDS |
CACTAACTATTCGAGATATC+TGG | 0.400772 | 2:-5354279 | None:intergenic |
TTTGTCAAGGCCATTGAACT+TGG | 0.414742 | 2:+5353455 | MsG0280006720.01.T01:CDS |
CTCGCACCCATTTCTTTGGT+CGG | 0.417146 | 2:+5353330 | MsG0280006720.01.T01:CDS |
TAAAATAATTCCAAGTTCAA+TGG | 0.417801 | 2:-5353465 | None:intergenic |
ACTTTGAAGACTTTGTGAAT+TGG | 0.423714 | 2:+5353636 | MsG0280006720.01.T01:CDS |
CCTTGTGGCGTCCATACATC+TGG | 0.427805 | 2:-5352225 | None:intergenic |
GTTTGCATGGATTGAAATCC+AGG | 0.431220 | 2:-5354220 | None:intergenic |
GTATAGTCCGACCAAAGAAA+TGG | 0.437269 | 2:-5353337 | None:intergenic |
CAGATATCTCGAATAGTTAG+TGG | 0.449389 | 2:+5354280 | MsG0280006720.01.T01:CDS |
ATCTGAGATGGATGTAAGAC+AGG | 0.449544 | 2:+5352024 | None:intergenic |
CCGGAGGGATTGAAGACAAA+AGG | 0.465342 | 2:-5353587 | None:intergenic |
GTGGGAGACTGTGGTTTCCT+TGG | 0.465722 | 2:+5354132 | MsG0280006720.01.T01:CDS |
CGGGTTCCTTCCTGCAGTAT+GGG | 0.465970 | 2:+5353247 | MsG0280006720.01.T01:CDS |
GGCCCTCAGCGGCATTGAAA+AGG | 0.468810 | 2:+5353106 | MsG0280006720.01.T01:CDS |
CAGTGTGACGCTGTTATTCA+AGG | 0.469113 | 2:+5352153 | MsG0280006720.01.T01:CDS |
GGCATTCATTCCCACAGGAT+GGG | 0.475339 | 2:+5354057 | MsG0280006720.01.T01:CDS |
ATACAGTATATCATCAGCTC+GGG | 0.478027 | 2:-5352260 | None:intergenic |
GATTTCAATCCATGCAAACT+AGG | 0.480793 | 2:+5354224 | MsG0280006720.01.T01:CDS |
TCTTTAATGAAGCTTTCAGC+AGG | 0.487904 | 2:+5354251 | MsG0280006720.01.T01:CDS |
TATAAAGTCGGCCCCAAGAA+AGG | 0.494168 | 2:-5353082 | None:intergenic |
TTGACAATGCAGTTGCAGCT+TGG | 0.503095 | 2:+5353275 | MsG0280006720.01.T01:CDS |
TAACAGCTTTCCCCATATAC+CGG | 0.509161 | 2:-5353744 | None:intergenic |
GTTGTGGCATGCCAGATGTA+TGG | 0.509660 | 2:+5352214 | MsG0280006720.01.T01:CDS |
AAAGAGAATCCTAGTTTGCA+TGG | 0.512137 | 2:-5354233 | None:intergenic |
CTGATTTACTATTGCACCAA+GGG | 0.516903 | 2:-5353159 | None:intergenic |
GCATTCATTCCCACAGGATG+GGG | 0.518062 | 2:+5354058 | MsG0280006720.01.T01:CDS |
CTGGGAAACATGGTGGTATG+AGG | 0.518819 | 2:+5353700 | MsG0280006720.01.T01:CDS |
TGGCATTCATTCCCACAGGA+TGG | 0.521720 | 2:+5354056 | MsG0280006720.01.T01:CDS |
TAGCTGTTTACTTGCTGTCA+TGG | 0.522085 | 2:+5353849 | MsG0280006720.01.T01:CDS |
TATGATTTGCAATGCCGAGC+TGG | 0.523278 | 2:-5353817 | None:intergenic |
AGCGGGTGAACTCCAGTAAG+AGG | 0.523866 | 2:-5354003 | None:intergenic |
TATGGCATTGTTTACCAGCT+CGG | 0.527068 | 2:+5353803 | MsG0280006720.01.T01:CDS |
TATAGTCCGACCAAAGAAAT+GGG | 0.527230 | 2:-5353336 | None:intergenic |
CTTCGCAATCTCCGTAGAGA+TGG | 0.530128 | 2:-5352121 | None:intergenic |
CAGAATACAGCTGGGAAACA+TGG | 0.534181 | 2:+5353690 | MsG0280006720.01.T01:CDS |
GTCAAGAAGTCCCATACTGC+AGG | 0.536391 | 2:-5353257 | None:intergenic |
GATACAGTATATCATCAGCT+CGG | 0.537492 | 2:-5352261 | None:intergenic |
GGTGCTAAGTACCGAGCCAC+AGG | 0.540256 | 2:+5353368 | MsG0280006720.01.T01:CDS |
TTCTCATAGTCCCTTGCCTA+AGG | 0.541328 | 2:+5353499 | MsG0280006720.01.T01:CDS |
AAGTACCGAGCCACAGGTCG+CGG | 0.541443 | 2:+5353374 | MsG0280006720.01.T01:CDS |
TTTGCAGTCAACTATAGTGT+GGG | 0.544904 | 2:+5354114 | MsG0280006720.01.T01:CDS |
AAGATCAACAAAACTGAAGC+GGG | 0.548247 | 2:-5354020 | None:intergenic |
GCTAGCAACAATAAAGCCCT+TGG | 0.553280 | 2:+5353143 | MsG0280006720.01.T01:CDS |
AACCATGAGAAAACTGCCAT+GGG | 0.553485 | 2:-5354196 | None:intergenic |
ACCATATGAAGTAATATGCT+CGG | 0.553535 | 2:-5352050 | None:intergenic |
GTGCAGTGGAAACACCAAGC+TGG | 0.558440 | 2:-5353193 | None:intergenic |
TATTCAAGGGAGATGAATAT+GGG | 0.558758 | 2:+5352167 | MsG0280006720.01.T01:CDS |
AACTATAGTGTGGGAGACTG+TGG | 0.561610 | 2:+5354123 | MsG0280006720.01.T01:CDS |
GTGAATTGGATTTGGTATCC+GGG | 0.564889 | 2:+5353650 | MsG0280006720.01.T01:CDS |
TGTTTCCACTGCACTCCCAA+TGG | 0.565694 | 2:+5353202 | MsG0280006720.01.T01:CDS |
CAGCAGTTTATAATCCAGCT+TGG | 0.567257 | 2:+5353179 | MsG0280006720.01.T01:CDS |
GTTGAAAATACTCTTGAGCA+CGG | 0.569539 | 2:+5353227 | MsG0280006720.01.T01:CDS |
CACCACAAAACCGCGACCTG+TGG | 0.571047 | 2:-5353384 | None:intergenic |
ATTGGATTTGGTATCCGGGT+GGG | 0.573521 | 2:+5353654 | MsG0280006720.01.T01:CDS |
CAAAACCGCGACCTGTGGCT+CGG | 0.579903 | 2:-5353379 | None:intergenic |
AACAACCATTGGGAGTGCAG+TGG | 0.580610 | 2:-5353207 | None:intergenic |
GACAGTCTATGCCTTTCTTG+GGG | 0.583562 | 2:+5353071 | MsG0280006720.01.T01:intron |
TGATCTTCTAACAAGCTCGT+TGG | 0.583812 | 2:+5354036 | MsG0280006720.01.T01:CDS |
CTTTAATGAAGCTTTCAGCA+GGG | 0.585149 | 2:+5354252 | MsG0280006720.01.T01:CDS |
GGGGATTCTTCTCTGCCTTG+TGG | 0.585705 | 2:-5352240 | None:intergenic |
TAAAATCATTCCCCATCCTG+TGG | 0.587056 | 2:-5354068 | None:intergenic |
TTGAAAATACTCTTGAGCAC+GGG | 0.588015 | 2:+5353228 | MsG0280006720.01.T01:CDS |
TCGTTGGCATTCATTCCCAC+AGG | 0.588317 | 2:+5354052 | MsG0280006720.01.T01:CDS |
ATATCAGCATAGCATATGCA+CGG | 0.588903 | 2:+5353900 | MsG0280006720.01.T01:CDS |
CGCTGAGGGCCATATAAAGT+CGG | 0.589493 | 2:-5353094 | None:intergenic |
ATGTACACAAAAGTAGCCTT+AGG | 0.590178 | 2:-5353515 | None:intergenic |
CAGATGTGCATCCATCTCTA+CGG | 0.592460 | 2:+5352110 | MsG0280006720.01.T01:CDS |
TAACCATGAGAAAACTGCCA+TGG | 0.595250 | 2:-5354197 | None:intergenic |
CACAAAAGTAGCCTTAGGCA+AGG | 0.598977 | 2:-5353510 | None:intergenic |
CATCTCTACGGAGATTGCGA+AGG | 0.601734 | 2:+5352122 | MsG0280006720.01.T01:CDS |
TTTAATGAAGCTTTCAGCAG+GGG | 0.604153 | 2:+5354253 | MsG0280006720.01.T01:CDS |
AAAATCATTCCCCATCCTGT+GGG | 0.608068 | 2:-5354067 | None:intergenic |
TATCAGCATAGCATATGCAC+GGG | 0.608824 | 2:+5353901 | MsG0280006720.01.T01:CDS |
ATCTCTACGGAGATTGCGAA+GGG | 0.612766 | 2:+5352123 | MsG0280006720.01.T01:CDS |
GAAGATCAACAAAACTGAAG+CGG | 0.623234 | 2:-5354021 | None:intergenic |
CCAGATGTATGGACGCCACA+AGG | 0.627610 | 2:+5352225 | MsG0280006720.01.T01:CDS |
AATTGGATTTGGTATCCGGG+TGG | 0.628673 | 2:+5353653 | MsG0280006720.01.T01:CDS |
AGTGTGACGCTGTTATTCAA+GGG | 0.635952 | 2:+5352154 | MsG0280006720.01.T01:CDS |
TTTCAGCCAATCAAATCCGG+AGG | 0.640689 | 2:-5353603 | None:intergenic |
TAAATCATAGAGTCGTGCCA+AGG | 0.642003 | 2:-5354149 | None:intergenic |
TTCAGCCAATCAAATCCGGA+GGG | 0.642943 | 2:-5353602 | None:intergenic |
CGACTTTATATGGCCCTCAG+CGG | 0.654037 | 2:+5353095 | MsG0280006720.01.T01:CDS |
CCATGAGAAAACTGCCATGG+GGG | 0.662286 | 2:-5354194 | None:intergenic |
GATGAAGTTCTCATATGTTG+TGG | 0.663021 | 2:+5352198 | MsG0280006720.01.T01:CDS |
GCTGATTTACTATTGCACCA+AGG | 0.665342 | 2:-5353160 | None:intergenic |
AGAAGTCCCATACTGCAGGA+AGG | 0.674019 | 2:-5353253 | None:intergenic |
ACAAAAGTAGCCTTAGGCAA+GGG | 0.677504 | 2:-5353509 | None:intergenic |
TCTGAGATGGATGTAAGACA+GGG | 0.680578 | 2:+5352025 | None:intergenic |
TACAGTATATCATCAGCTCG+GGG | 0.689782 | 2:-5352259 | None:intergenic |
AATACAGCTGGGAAACATGG+TGG | 0.700343 | 2:+5353693 | MsG0280006720.01.T01:CDS |
ACCATGAGAAAACTGCCATG+GGG | 0.707768 | 2:-5354195 | None:intergenic |
CTGAGCGTAGAGTATTCAGA+CGG | 0.716239 | 2:-5352090 | None:intergenic |
GGTCGGACTATACTTCATGG+TGG | 0.727197 | 2:+5353347 | MsG0280006720.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATAATTCCAAGTTCAA+TGG | - | Chr2:5353468-5353487 | None:intergenic | 20.0% |
!!! | ATTTTTTACATTCTTCTCTT+TGG | + | Chr2:5353304-5353323 | MsG0280006720.01.T01:CDS | 20.0% |
!!! | TTTTTTACATTCTTCTCTTT+GGG | + | Chr2:5353305-5353324 | MsG0280006720.01.T01:CDS | 20.0% |
! | ATTGTCTTGATTCATATCTA+TGG | - | Chr2:5352506-5352525 | None:intergenic | 25.0% |
!!! | ATTAGTGAAGATATTTTTGC+TGG | + | Chr2:5352809-5352828 | MsG0280006720.01.T01:intron | 25.0% |
!!! | GAATCAAGACAATTATTTTG+AGG | + | Chr2:5352513-5352532 | MsG0280006720.01.T01:intron | 25.0% |
AAGACTTTGTGAATTGGATT+TGG | + | Chr2:5353642-5353661 | MsG0280006720.01.T01:CDS | 30.0% | |
ACCATATGAAGTAATATGCT+CGG | - | Chr2:5352053-5352072 | None:intergenic | 30.0% | |
ACTATAGTTGACTGCAAAAA+AGG | - | Chr2:5354112-5354131 | None:intergenic | 30.0% | |
ACTGAAAGAAGAAAAATCGA+AGG | - | Chr2:5353784-5353803 | None:intergenic | 30.0% | |
ATCTAAAAACAACCGGTATA+TGG | + | Chr2:5353732-5353751 | MsG0280006720.01.T01:CDS | 30.0% | |
CAAGATCATCTAAAAACAAC+CGG | + | Chr2:5353725-5353744 | MsG0280006720.01.T01:CDS | 30.0% | |
CATCATGAATATATACAGGT+AGG | + | Chr2:5352865-5352884 | MsG0280006720.01.T01:intron | 30.0% | |
GAATATATACAGGTAGGTAA+AGG | + | Chr2:5352871-5352890 | MsG0280006720.01.T01:intron | 30.0% | |
GACACATCATGAATATATAC+AGG | + | Chr2:5352861-5352880 | MsG0280006720.01.T01:intron | 30.0% | |
GACTCTATGATTTACTGTTT+GGG | + | Chr2:5354158-5354177 | MsG0280006720.01.T01:CDS | 30.0% | |
TATCTGATGAAAAACAACGA+GGG | + | Chr2:5352280-5352299 | MsG0280006720.01.T01:intron | 30.0% | |
TATTCAAGGGAGATGAATAT+GGG | + | Chr2:5352167-5352186 | MsG0280006720.01.T01:CDS | 30.0% | |
TCTAAAAACAACCGGTATAT+GGG | + | Chr2:5353733-5353752 | MsG0280006720.01.T01:CDS | 30.0% | |
TTATTCAAGGGAGATGAATA+TGG | + | Chr2:5352166-5352185 | MsG0280006720.01.T01:CDS | 30.0% | |
! | ACTGTTTGGGATTATTGTTA+TGG | + | Chr2:5354171-5354190 | MsG0280006720.01.T01:CDS | 30.0% |
! | ACTTTGAAGACTTTGTGAAT+TGG | + | Chr2:5353636-5353655 | MsG0280006720.01.T01:CDS | 30.0% |
! | AGGATTTTACTTTAACTCCA+TGG | + | Chr2:5353038-5353057 | MsG0280006720.01.T01:intron | 30.0% |
! | ATATGTTGATGAGGTTTCTT+TGG | + | Chr2:5352316-5352335 | MsG0280006720.01.T01:intron | 30.0% |
! | ATTGGTTTCTTGTAGTTTCA+TGG | + | Chr2:5353555-5353574 | MsG0280006720.01.T01:CDS | 30.0% |
! | ATTGTTGCTAGCATTGTTTT+GGG | - | Chr2:5353135-5353154 | None:intergenic | 30.0% |
! | CGATTTTTCTTCTTTCAGTA+TGG | + | Chr2:5353785-5353804 | MsG0280006720.01.T01:CDS | 30.0% |
! | GAGTATTTTCAACAACCATT+GGG | - | Chr2:5353220-5353239 | None:intergenic | 30.0% |
! | TATGTTGATGAGGTTTCTTT+GGG | + | Chr2:5352317-5352336 | MsG0280006720.01.T01:intron | 30.0% |
! | TATTGTTGCTAGCATTGTTT+TGG | - | Chr2:5353136-5353155 | None:intergenic | 30.0% |
!! | AGAGTATTTTCAACAACCAT+TGG | - | Chr2:5353221-5353240 | None:intergenic | 30.0% |
AAGATCAACAAAACTGAAGC+GGG | - | Chr2:5354023-5354042 | None:intergenic | 35.0% | |
AATCATGCATGATCTTTACG+CGG | + | Chr2:5352464-5352483 | MsG0280006720.01.T01:intron | 35.0% | |
ATACAGTATATCATCAGCTC+GGG | - | Chr2:5352263-5352282 | None:intergenic | 35.0% | |
ATATCAGCATAGCATATGCA+CGG | + | Chr2:5353900-5353919 | MsG0280006720.01.T01:CDS | 35.0% | |
ATCAACATATGCTACTCGAA+GGG | - | Chr2:5352306-5352325 | None:intergenic | 35.0% | |
ATGTACACAAAAGTAGCCTT+AGG | - | Chr2:5353518-5353537 | None:intergenic | 35.0% | |
CACTAACTATTCGAGATATC+TGG | - | Chr2:5354282-5354301 | None:intergenic | 35.0% | |
CAGATATCTCGAATAGTTAG+TGG | + | Chr2:5354280-5354299 | MsG0280006720.01.T01:CDS | 35.0% | |
CGACTCTATGATTTACTGTT+TGG | + | Chr2:5354157-5354176 | MsG0280006720.01.T01:CDS | 35.0% | |
CTAAAAACAACCGGTATATG+GGG | + | Chr2:5353734-5353753 | MsG0280006720.01.T01:CDS | 35.0% | |
CTGATTTACTATTGCACCAA+GGG | - | Chr2:5353162-5353181 | None:intergenic | 35.0% | |
CTTTAATGAAGCTTTCAGCA+GGG | + | Chr2:5354252-5354271 | MsG0280006720.01.T01:CDS | 35.0% | |
GAAGATCAACAAAACTGAAG+CGG | - | Chr2:5354024-5354043 | None:intergenic | 35.0% | |
GAATCAGATATCCATGTTTG+AGG | + | Chr2:5352909-5352928 | MsG0280006720.01.T01:intron | 35.0% | |
GATACAGTATATCATCAGCT+CGG | - | Chr2:5352264-5352283 | None:intergenic | 35.0% | |
GATGAAGTTCTCATATGTTG+TGG | + | Chr2:5352198-5352217 | MsG0280006720.01.T01:CDS | 35.0% | |
GATTTCAATCCATGCAAACT+AGG | + | Chr2:5354224-5354243 | MsG0280006720.01.T01:CDS | 35.0% | |
GTATCTGATGAAAAACAACG+AGG | + | Chr2:5352279-5352298 | MsG0280006720.01.T01:intron | 35.0% | |
GTTCGAGAGAATATATTCAC+AGG | + | Chr2:5352610-5352629 | MsG0280006720.01.T01:intron | 35.0% | |
GTTGAAAATACTCTTGAGCA+CGG | + | Chr2:5353227-5353246 | MsG0280006720.01.T01:CDS | 35.0% | |
TAGCTATGACACTCTCAAAT+TGG | + | Chr2:5353537-5353556 | MsG0280006720.01.T01:CDS | 35.0% | |
TATAGTCCGACCAAAGAAAT+GGG | - | Chr2:5353339-5353358 | None:intergenic | 35.0% | |
TCAGTGTTCTACACAACTAT+AGG | + | Chr2:5353018-5353037 | MsG0280006720.01.T01:intron | 35.0% | |
TCCGAGCATATTACTTCATA+TGG | + | Chr2:5352049-5352068 | MsG0280006720.01.T01:CDS | 35.0% | |
TCTAGTAATTGTCCTCTTAC+TGG | + | Chr2:5353991-5354010 | MsG0280006720.01.T01:CDS | 35.0% | |
TCTTTAATGAAGCTTTCAGC+AGG | + | Chr2:5354251-5354270 | MsG0280006720.01.T01:CDS | 35.0% | |
TGTCACAAAACTTGTCTCTT+GGG | - | Chr2:5352668-5352687 | None:intergenic | 35.0% | |
TTGAAAATACTCTTGAGCAC+GGG | + | Chr2:5353228-5353247 | MsG0280006720.01.T01:CDS | 35.0% | |
TTTAATGAAGCTTTCAGCAG+GGG | + | Chr2:5354253-5354272 | MsG0280006720.01.T01:CDS | 35.0% | |
TTTGCAGTCAACTATAGTGT+GGG | + | Chr2:5354114-5354133 | MsG0280006720.01.T01:CDS | 35.0% | |
! | AAAGAGAATCCTAGTTTGCA+TGG | - | Chr2:5354236-5354255 | None:intergenic | 35.0% |
! | AGAGTTTTGCTGAGAACTAT+CGG | + | Chr2:5353414-5353433 | MsG0280006720.01.T01:CDS | 35.0% |
! | AGTTTTCAGCCAATCAAATC+CGG | - | Chr2:5353609-5353628 | None:intergenic | 35.0% |
! | ATCAAGAAGCCAACCATTTT+GGG | + | Chr2:5352586-5352605 | MsG0280006720.01.T01:intron | 35.0% |
! | ATGTTGATGAGGTTTCTTTG+GGG | + | Chr2:5352318-5352337 | MsG0280006720.01.T01:intron | 35.0% |
! | CATGCATGATTCTGATTTTC+TGG | - | Chr2:5352455-5352474 | None:intergenic | 35.0% |
! | CTGTATTCTGCCTTTTTGAA+CGG | - | Chr2:5353680-5353699 | None:intergenic | 35.0% |
! | TATCAAGAAGCCAACCATTT+TGG | + | Chr2:5352585-5352604 | MsG0280006720.01.T01:intron | 35.0% |
! | TGTGAATTGGATTTGGTATC+CGG | + | Chr2:5353649-5353668 | MsG0280006720.01.T01:CDS | 35.0% |
! | TTTTGCAGTCAACTATAGTG+TGG | + | Chr2:5354113-5354132 | MsG0280006720.01.T01:CDS | 35.0% |
!! | GTCCTTTAAAACTTGGAGAA+GGG | + | Chr2:5352427-5352446 | MsG0280006720.01.T01:intron | 35.0% |
!! | TTCCCTTCTCCAAGTTTTAA+AGG | - | Chr2:5352432-5352451 | None:intergenic | 35.0% |
AAAATCATTCCCCATCCTGT+GGG | - | Chr2:5354070-5354089 | None:intergenic | 40.0% | |
AACCATGAGAAAACTGCCAT+GGG | - | Chr2:5354199-5354218 | None:intergenic | 40.0% | |
AGAGTGAGGTTGAGATCTTT+CGG | + | Chr2:5352391-5352410 | MsG0280006720.01.T01:intron | 40.0% | |
AGTCTAATCTATGTCCTAGC+CGG | - | Chr2:5352984-5353003 | None:intergenic | 40.0% | |
AGTGCAGCTTCTTGTGATTA+TGG | + | Chr2:5353961-5353980 | MsG0280006720.01.T01:CDS | 40.0% | |
AGTGTGACGCTGTTATTCAA+GGG | + | Chr2:5352154-5352173 | MsG0280006720.01.T01:CDS | 40.0% | |
ATCATGCATGATCTTTACGC+GGG | + | Chr2:5352465-5352484 | MsG0280006720.01.T01:intron | 40.0% | |
ATGACAGTCTATGCCTTTCT+TGG | + | Chr2:5353069-5353088 | MsG0280006720.01.T01:intron | 40.0% | |
CAAAAAGGCAGAATACAGCT+GGG | + | Chr2:5353682-5353701 | MsG0280006720.01.T01:CDS | 40.0% | |
CAGAATCTGTCAAACACATC+CGG | - | Chr2:5352744-5352763 | None:intergenic | 40.0% | |
CAGCAGTTTATAATCCAGCT+TGG | + | Chr2:5353179-5353198 | MsG0280006720.01.T01:CDS | 40.0% | |
CATCAACATATGCTACTCGA+AGG | - | Chr2:5352307-5352326 | None:intergenic | 40.0% | |
GACTGTCATTACAACTACCA+TGG | - | Chr2:5353058-5353077 | None:intergenic | 40.0% | |
GCATATGCACGGGATAAATA+TGG | + | Chr2:5353911-5353930 | MsG0280006720.01.T01:CDS | 40.0% | |
GTAGGTAAAGGAAGAGATGT+TGG | + | Chr2:5352883-5352902 | MsG0280006720.01.T01:intron | 40.0% | |
GTATAGTCCGACCAAAGAAA+TGG | - | Chr2:5353340-5353359 | None:intergenic | 40.0% | |
GTGTCACAAAACTTGTCTCT+TGG | - | Chr2:5352669-5352688 | None:intergenic | 40.0% | |
TAAAATCATTCCCCATCCTG+TGG | - | Chr2:5354071-5354090 | None:intergenic | 40.0% | |
TAAATCATAGAGTCGTGCCA+AGG | - | Chr2:5354152-5354171 | None:intergenic | 40.0% | |
TAACAGCTTTCCCCATATAC+CGG | - | Chr2:5353747-5353766 | None:intergenic | 40.0% | |
TAACCATGAGAAAACTGCCA+TGG | - | Chr2:5354200-5354219 | None:intergenic | 40.0% | |
TACAGTATATCATCAGCTCG+GGG | - | Chr2:5352262-5352281 | None:intergenic | 40.0% | |
TAGTGCATCCGTACTTTCAA+GGG | - | Chr2:5352714-5352733 | None:intergenic | 40.0% | |
TATCAGCATAGCATATGCAC+GGG | + | Chr2:5353901-5353920 | MsG0280006720.01.T01:CDS | 40.0% | |
TATGGCATTGTTTACCAGCT+CGG | + | Chr2:5353803-5353822 | MsG0280006720.01.T01:CDS | 40.0% | |
TCAAAAAGGCAGAATACAGC+TGG | + | Chr2:5353681-5353700 | MsG0280006720.01.T01:CDS | 40.0% | |
TCGAGTAGCATATGTTGATG+AGG | + | Chr2:5352307-5352326 | MsG0280006720.01.T01:intron | 40.0% | |
TCTCAAAATGCGGAATCTGT+TGG | + | Chr2:5352540-5352559 | MsG0280006720.01.T01:intron | 40.0% | |
TGACAGTCTATGCCTTTCTT+GGG | + | Chr2:5353070-5353089 | MsG0280006720.01.T01:intron | 40.0% | |
TGATCTTCTAACAAGCTCGT+TGG | + | Chr2:5354036-5354055 | MsG0280006720.01.T01:CDS | 40.0% | |
TGGTTCAATTGTACATTGCG+AGG | + | Chr2:5352829-5352848 | MsG0280006720.01.T01:intron | 40.0% | |
TTCAATTGTACATTGCGAGG+TGG | + | Chr2:5352832-5352851 | MsG0280006720.01.T01:intron | 40.0% | |
TTGAGGAAGCTCTCAAAATG+CGG | + | Chr2:5352530-5352549 | MsG0280006720.01.T01:intron | 40.0% | |
TTTGGTCGGACTATACTTCA+TGG | + | Chr2:5353344-5353363 | MsG0280006720.01.T01:CDS | 40.0% | |
TTTGTCAAGGCCATTGAACT+TGG | + | Chr2:5353455-5353474 | MsG0280006720.01.T01:CDS | 40.0% | |
! | ACAAAAGTAGCCTTAGGCAA+GGG | - | Chr2:5353512-5353531 | None:intergenic | 40.0% |
! | CTTGCTGTCATGGATATTCA+TGG | + | Chr2:5353859-5353878 | MsG0280006720.01.T01:CDS | 40.0% |
! | GCTGATTTACTATTGCACCA+AGG | - | Chr2:5353163-5353182 | None:intergenic | 40.0% |
! | GTGAATTGGATTTGGTATCC+GGG | + | Chr2:5353650-5353669 | MsG0280006720.01.T01:CDS | 40.0% |
! | GTTCAATGGCCTTGACAAAA+TGG | - | Chr2:5353454-5353473 | None:intergenic | 40.0% |
! | GTTTGCATGGATTGAAATCC+AGG | - | Chr2:5354223-5354242 | None:intergenic | 40.0% |
! | TCAAGAAGCCAACCATTTTG+GGG | + | Chr2:5352587-5352606 | MsG0280006720.01.T01:intron | 40.0% |
! | TGTAGAACACTGAAAGCATG+CGG | - | Chr2:5353011-5353030 | None:intergenic | 40.0% |
! | TTGAAAGTACGGATGCACTA+CGG | + | Chr2:5352714-5352733 | MsG0280006720.01.T01:intron | 40.0% |
! | TTTTAATAGCCCAGGTGCTT+AGG | + | Chr2:5354086-5354105 | MsG0280006720.01.T01:CDS | 40.0% |
!! | ACAGATTCTGGTTCTTGTGT+AGG | + | Chr2:5352754-5352773 | MsG0280006720.01.T01:intron | 40.0% |
!! | AGAGACAAGTTTTGTGACAC+TGG | + | Chr2:5352669-5352688 | MsG0280006720.01.T01:intron | 40.0% |
!! | AGATTCTGGTTCTTGTGTAG+GGG | + | Chr2:5352756-5352775 | MsG0280006720.01.T01:intron | 40.0% |
!! | CAGATTCTGGTTCTTGTGTA+GGG | + | Chr2:5352755-5352774 | MsG0280006720.01.T01:intron | 40.0% |
!! | GAGACAAGTTTTGTGACACT+GGG | + | Chr2:5352670-5352689 | MsG0280006720.01.T01:intron | 40.0% |
!! | GGGAATGATTTTAATAGCCC+AGG | + | Chr2:5354078-5354097 | MsG0280006720.01.T01:CDS | 40.0% |
!! | GGTCCTTTAAAACTTGGAGA+AGG | + | Chr2:5352426-5352445 | MsG0280006720.01.T01:intron | 40.0% |
!! | TAGCTGTTTACTTGCTGTCA+TGG | + | Chr2:5353849-5353868 | MsG0280006720.01.T01:CDS | 40.0% |
!! | TGCTAGAAGCCATTTTGTCA+AGG | + | Chr2:5353442-5353461 | MsG0280006720.01.T01:CDS | 40.0% |
!! | TTGCCTGGTCCTTTAAAACT+TGG | + | Chr2:5352420-5352439 | MsG0280006720.01.T01:intron | 40.0% |
!!! | TCTCCAAGTTTTAAAGGACC+AGG | - | Chr2:5352426-5352445 | None:intergenic | 40.0% |
AACTATAGTGTGGGAGACTG+TGG | + | Chr2:5354123-5354142 | MsG0280006720.01.T01:CDS | 45.0% | |
AATACAGCTGGGAAACATGG+TGG | + | Chr2:5353693-5353712 | MsG0280006720.01.T01:CDS | 45.0% | |
ACCATGAGAAAACTGCCATG+GGG | - | Chr2:5354198-5354217 | None:intergenic | 45.0% | |
ATCTCTACGGAGATTGCGAA+GGG | + | Chr2:5352123-5352142 | MsG0280006720.01.T01:CDS | 45.0% | |
ATTCTCTCGAACCCCCAAAA+TGG | - | Chr2:5352602-5352621 | None:intergenic | 45.0% | |
CAAAAAAGGCCTAAGCACCT+GGG | - | Chr2:5354098-5354117 | None:intergenic | 45.0% | |
CAAAATGCGGAATCTGTTGG+AGG | + | Chr2:5352543-5352562 | MsG0280006720.01.T01:intron | 45.0% | |
CAGAATACAGCTGGGAAACA+TGG | + | Chr2:5353690-5353709 | MsG0280006720.01.T01:CDS | 45.0% | |
CAGATGTGCATCCATCTCTA+CGG | + | Chr2:5352110-5352129 | MsG0280006720.01.T01:CDS | 45.0% | |
CAGTGTGACGCTGTTATTCA+AGG | + | Chr2:5352153-5352172 | MsG0280006720.01.T01:CDS | 45.0% | |
CGGATGTGTTTGACAGATTC+TGG | + | Chr2:5352742-5352761 | MsG0280006720.01.T01:intron | 45.0% | |
CTGGCAAACCCTTGAAAGTA+CGG | + | Chr2:5352703-5352722 | MsG0280006720.01.T01:intron | 45.0% | |
GACAGTCTATGCCTTTCTTG+GGG | + | Chr2:5353071-5353090 | MsG0280006720.01.T01:intron | 45.0% | |
GAGGAGTTCAATGTCTACCA+TGG | + | Chr2:5352562-5352581 | MsG0280006720.01.T01:intron | 45.0% | |
GAGTGAGGTTGAGATCTTTC+GGG | + | Chr2:5352392-5352411 | MsG0280006720.01.T01:intron | 45.0% | |
GATTATTGTTATGGCCCCCA+TGG | + | Chr2:5354180-5354199 | MsG0280006720.01.T01:CDS | 45.0% | |
GCTAGCAACAATAAAGCCCT+TGG | + | Chr2:5353143-5353162 | MsG0280006720.01.T01:CDS | 45.0% | |
GTAGTGCATCCGTACTTTCA+AGG | - | Chr2:5352715-5352734 | None:intergenic | 45.0% | |
TATAAAGTCGGCCCCAAGAA+AGG | - | Chr2:5353085-5353104 | None:intergenic | 45.0% | |
TCAATCCCTCCGGATTTGAT+TGG | + | Chr2:5353597-5353616 | MsG0280006720.01.T01:CDS | 45.0% | |
TCATGCATGATCTTTACGCG+GGG | + | Chr2:5352466-5352485 | MsG0280006720.01.T01:intron | 45.0% | |
TGATCAGCAATTGCAGAGTG+AGG | + | Chr2:5352377-5352396 | MsG0280006720.01.T01:intron | 45.0% | |
TTCAGCCAATCAAATCCGGA+GGG | - | Chr2:5353605-5353624 | None:intergenic | 45.0% | |
TTCTCATAGTCCCTTGCCTA+AGG | + | Chr2:5353499-5353518 | MsG0280006720.01.T01:CDS | 45.0% | |
TTGACAATGCAGTTGCAGCT+TGG | + | Chr2:5353275-5353294 | MsG0280006720.01.T01:CDS | 45.0% | |
TTTCAGCCAATCAAATCCGG+AGG | - | Chr2:5353606-5353625 | None:intergenic | 45.0% | |
! | AATTGGATTTGGTATCCGGG+TGG | + | Chr2:5353653-5353672 | MsG0280006720.01.T01:CDS | 45.0% |
! | ATTGGATTTGGTATCCGGGT+GGG | + | Chr2:5353654-5353673 | MsG0280006720.01.T01:CDS | 45.0% |
! | CAAGAAGCCAACCATTTTGG+GGG | + | Chr2:5352588-5352607 | MsG0280006720.01.T01:intron | 45.0% |
! | CACAAAAGTAGCCTTAGGCA+AGG | - | Chr2:5353513-5353532 | None:intergenic | 45.0% |
! | CCTTTTGTCTTCAATCCCTC+CGG | + | Chr2:5353587-5353606 | MsG0280006720.01.T01:CDS | 45.0% |
! | CTGAGCGTAGAGTATTCAGA+CGG | - | Chr2:5352093-5352112 | None:intergenic | 45.0% |
! | GATATCCATGTTTGAGGCCA+AGG | + | Chr2:5352915-5352934 | MsG0280006720.01.T01:intron | 45.0% |
! | GCAGTTTTCTCATGGTTACC+TGG | + | Chr2:5354202-5354221 | MsG0280006720.01.T01:CDS | 45.0% |
! | TATGATTTGCAATGCCGAGC+TGG | - | Chr2:5353820-5353839 | None:intergenic | 45.0% |
! | TGATGAGGTTTCTTTGGGGA+GGG | + | Chr2:5352322-5352341 | MsG0280006720.01.T01:intron | 45.0% |
! | TTCCTTTTCAATGCCGCTGA+GGG | - | Chr2:5353111-5353130 | None:intergenic | 45.0% |
! | TTCTTGGGGCCGACTTTATA+TGG | + | Chr2:5353085-5353104 | MsG0280006720.01.T01:CDS | 45.0% |
! | TTGATGAGGTTTCTTTGGGG+AGG | + | Chr2:5352321-5352340 | MsG0280006720.01.T01:intron | 45.0% |
!! | TGGTTGGCTTCTTGATACCA+TGG | - | Chr2:5352582-5352601 | None:intergenic | 45.0% |
AAGGGTTTGCCAGAAATCGC+TGG | - | Chr2:5352696-5352715 | None:intergenic | 50.0% | |
AGAAGTCCCATACTGCAGGA+AGG | - | Chr2:5353256-5353275 | None:intergenic | 50.0% | |
CATCTCTACGGAGATTGCGA+AGG | + | Chr2:5352122-5352141 | MsG0280006720.01.T01:CDS | 50.0% | |
CCATGAGAAAACTGCCATGG+GGG | - | Chr2:5354197-5354216 | None:intergenic | 50.0% | |
CCGGAGGGATTGAAGACAAA+AGG | - | Chr2:5353590-5353609 | None:intergenic | 50.0% | |
CGACTTTATATGGCCCTCAG+CGG | + | Chr2:5353095-5353114 | MsG0280006720.01.T01:CDS | 50.0% | |
CGCTGAGGGCCATATAAAGT+CGG | - | Chr2:5353097-5353116 | None:intergenic | 50.0% | |
CTCGCACCCATTTCTTTGGT+CGG | + | Chr2:5353330-5353349 | MsG0280006720.01.T01:CDS | 50.0% | |
CTGGGAAACATGGTGGTATG+AGG | + | Chr2:5353700-5353719 | MsG0280006720.01.T01:CDS | 50.0% | |
CTTCGCAATCTCCGTAGAGA+TGG | - | Chr2:5352124-5352143 | None:intergenic | 50.0% | |
GCAAAAAAGGCCTAAGCACC+TGG | - | Chr2:5354099-5354118 | None:intergenic | 50.0% | |
GCATTCATTCCCACAGGATG+GGG | + | Chr2:5354058-5354077 | MsG0280006720.01.T01:CDS | 50.0% | |
GGAACTCGCACCCATTTCTT+TGG | + | Chr2:5353326-5353345 | MsG0280006720.01.T01:CDS | 50.0% | |
GGCATTCATTCCCACAGGAT+GGG | + | Chr2:5354057-5354076 | MsG0280006720.01.T01:CDS | 50.0% | |
GGTCGGACTATACTTCATGG+TGG | + | Chr2:5353347-5353366 | MsG0280006720.01.T01:CDS | 50.0% | |
GTCAAGAAGTCCCATACTGC+AGG | - | Chr2:5353260-5353279 | None:intergenic | 50.0% | |
GTTGTGGCATGCCAGATGTA+TGG | + | Chr2:5352214-5352233 | MsG0280006720.01.T01:CDS | 50.0% | |
TCGTTGGCATTCATTCCCAC+AGG | + | Chr2:5354052-5354071 | MsG0280006720.01.T01:CDS | 50.0% | |
TCTCGAACCCCCAAAATGGT+TGG | - | Chr2:5352598-5352617 | None:intergenic | 50.0% | |
TGCTGAGCAGAGATGTCTAC+CGG | + | Chr2:5352962-5352981 | MsG0280006720.01.T01:intron | 50.0% | |
TGGCATTCATTCCCACAGGA+TGG | + | Chr2:5354056-5354075 | MsG0280006720.01.T01:CDS | 50.0% | |
TGTTTCCACTGCACTCCCAA+TGG | + | Chr2:5353202-5353221 | MsG0280006720.01.T01:CDS | 50.0% | |
! | AACAACCATTGGGAGTGCAG+TGG | - | Chr2:5353210-5353229 | None:intergenic | 50.0% |
! | ATCTTTCGGGTCAGATTGCC+TGG | + | Chr2:5352405-5352424 | MsG0280006720.01.T01:intron | 50.0% |
! | CTTCCTTTTCAATGCCGCTG+AGG | - | Chr2:5353112-5353131 | None:intergenic | 50.0% |
!! | TTCTGGTTCTTGTGTAGGGG+TGG | + | Chr2:5352759-5352778 | MsG0280006720.01.T01:intron | 50.0% |
ACGGATGCACTACGGTCATC+CGG | + | Chr2:5352722-5352741 | MsG0280006720.01.T01:intron | 55.0% | |
ACGGGTTCCTTCCTGCAGTA+TGG | + | Chr2:5353246-5353265 | MsG0280006720.01.T01:CDS | 55.0% | |
AGCGGGTGAACTCCAGTAAG+AGG | - | Chr2:5354006-5354025 | None:intergenic | 55.0% | |
CCAGATGTATGGACGCCACA+AGG | + | Chr2:5352225-5352244 | MsG0280006720.01.T01:CDS | 55.0% | |
CCTTGTGGCGTCCATACATC+TGG | - | Chr2:5352228-5352247 | None:intergenic | 55.0% | |
CGGGTTCCTTCCTGCAGTAT+GGG | + | Chr2:5353247-5353266 | MsG0280006720.01.T01:CDS | 55.0% | |
GCTCTGTTTCGTCGCTTGCT+TGG | + | Chr2:5352632-5352651 | MsG0280006720.01.T01:intron | 55.0% | |
GGGGATTCTTCTCTGCCTTG+TGG | - | Chr2:5352243-5352262 | None:intergenic | 55.0% | |
GTGCAGTGGAAACACCAAGC+TGG | - | Chr2:5353196-5353215 | None:intergenic | 55.0% | |
GTGGGAGACTGTGGTTTCCT+TGG | + | Chr2:5354132-5354151 | MsG0280006720.01.T01:CDS | 55.0% | |
TGCGACCTTGGCCTCAAACA+TGG | - | Chr2:5352923-5352942 | None:intergenic | 55.0% | |
! | AGCAGAGATGTCTACCGGCT+AGG | + | Chr2:5352967-5352986 | MsG0280006720.01.T01:intron | 55.0% |
! | CCCCCATGGCAGTTTTCTCA+TGG | + | Chr2:5354194-5354213 | MsG0280006720.01.T01:CDS | 55.0% |
! | TTTGAGGCCAAGGTCGCAAG+TGG | + | Chr2:5352925-5352944 | MsG0280006720.01.T01:intron | 55.0% |
CAAAACCGCGACCTGTGGCT+CGG | - | Chr2:5353382-5353401 | None:intergenic | 60.0% | |
CACCACAAAACCGCGACCTG+TGG | - | Chr2:5353387-5353406 | None:intergenic | 60.0% | |
GACACTGGGCCAGCGATTTC+TGG | + | Chr2:5352684-5352703 | MsG0280006720.01.T01:intron | 60.0% | |
GCCAAGGTCGCAAGTGGCAA+TGG | + | Chr2:5352931-5352950 | MsG0280006720.01.T01:intron | 60.0% | |
GTGTAGGGGTGGAGTCAGCA+AGG | + | Chr2:5352770-5352789 | MsG0280006720.01.T01:intron | 60.0% | |
TCCGGGTGGGCCGTTCAAAA+AGG | + | Chr2:5353667-5353686 | MsG0280006720.01.T01:CDS | 60.0% | |
! | AGCCACAGGTCGCGGTTTTG+TGG | + | Chr2:5353382-5353401 | MsG0280006720.01.T01:CDS | 60.0% |
! | GCCATTGCCACTTGCGACCT+TGG | - | Chr2:5352935-5352954 | None:intergenic | 60.0% |
! | GCCTTTTTGAACGGCCCACC+CGG | - | Chr2:5353671-5353690 | None:intergenic | 60.0% |
! | GGCCCTCAGCGGCATTGAAA+AGG | + | Chr2:5353106-5353125 | MsG0280006720.01.T01:CDS | 60.0% |
!! | AAGTACCGAGCCACAGGTCG+CGG | + | Chr2:5353374-5353393 | MsG0280006720.01.T01:CDS | 60.0% |
!! | CACAGGTCGCGGTTTTGTGG+TGG | + | Chr2:5353385-5353404 | MsG0280006720.01.T01:CDS | 60.0% |
!! | GGTGCTAAGTACCGAGCCAC+AGG | + | Chr2:5353368-5353387 | MsG0280006720.01.T01:CDS | 60.0% |
CGCAAGTGGCAATGGCGAGC+AGG | + | Chr2:5352939-5352958 | MsG0280006720.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 5352031 | 5354318 | 5352031 | ID=MsG0280006720.01;Name=MsG0280006720.01 |
Chr2 | mRNA | 5352031 | 5354318 | 5352031 | ID=MsG0280006720.01.T01;Parent=MsG0280006720.01;Name=MsG0280006720.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|2|0|496 |
Chr2 | exon | 5352031 | 5352278 | 5352031 | ID=MsG0280006720.01.T01:exon:2140;Parent=MsG0280006720.01.T01 |
Chr2 | exon | 5353076 | 5354318 | 5353076 | ID=MsG0280006720.01.T01:exon:2141;Parent=MsG0280006720.01.T01 |
Chr2 | CDS | 5352031 | 5352278 | 5352031 | ID=MsG0280006720.01.T01:cds;Parent=MsG0280006720.01.T01 |
Chr2 | CDS | 5353076 | 5354318 | 5353076 | ID=MsG0280006720.01.T01:cds;Parent=MsG0280006720.01.T01 |
Gene Sequence |
Protein sequence |