AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024981.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024981.01.T01 MTR_5g020630 95.495 444 18 1 1 444 1 442 0.0 845
MsG0580024981.01.T01 MTR_0024s0070 28.650 363 209 9 86 420 7 347 1.40e-26 110
MsG0580024981.01.T01 MTR_0024s0070 39.007 141 83 2 64 203 196 334 2.00e-20 93.2
MsG0580024981.01.T01 MTR_0024s0070 22.727 308 188 6 137 442 4 263 3.07e-13 71.6
MsG0580024981.01.T01 MTR_8g094410 26.146 371 208 12 62 423 12 325 1.15e-25 107
MsG0580024981.01.T01 MTR_8g094410 34.946 186 110 5 31 215 93 268 2.20e-18 86.7
MsG0580024981.01.T01 MTR_8g094410 23.841 302 189 7 165 442 8 292 3.76e-16 80.1
MsG0580024981.01.T01 MTR_8g094410 26.146 371 208 12 62 423 12 325 1.18e-25 108
MsG0580024981.01.T01 MTR_8g094410 34.946 186 110 5 31 215 93 268 3.17e-18 86.7
MsG0580024981.01.T01 MTR_8g094410 23.684 304 187 7 165 442 8 292 9.78e-16 79.0
MsG0580024981.01.T01 MTR_8g094410 25.490 408 229 13 26 423 32 374 3.01e-25 107
MsG0580024981.01.T01 MTR_8g094410 24.485 388 228 11 62 442 12 341 4.82e-22 98.2
MsG0580024981.01.T01 MTR_8g094410 25.369 339 180 11 116 443 14 290 3.46e-15 77.4
MsG0580024981.01.T01 MTR_8g094410 25.735 408 228 14 26 423 32 374 5.05e-25 107
MsG0580024981.01.T01 MTR_8g094410 24.485 388 228 11 62 442 12 341 6.85e-22 98.2
MsG0580024981.01.T01 MTR_8g094410 24.779 339 182 10 116 443 14 290 2.54e-15 78.2
MsG0580024981.01.T01 MTR_3g096780 26.392 413 219 17 26 423 34 376 4.22e-24 104
MsG0580024981.01.T01 MTR_3g096780 23.232 396 235 9 56 442 8 343 5.80e-22 98.2
MsG0580024981.01.T01 MTR_3g096780 27.302 315 158 10 141 444 39 293 6.18e-20 92.0
MsG0580024981.01.T01 MTR_3g096780 25.212 353 192 12 28 372 89 377 3.44e-18 87.0
MsG0580024981.01.T01 MTR_3g096780 30.350 257 154 9 28 273 141 383 4.11e-17 83.6
MsG0580024981.01.T01 MTR_1g099220 26.829 410 220 14 55 442 270 621 1.42e-22 101
MsG0580024981.01.T01 MTR_8g094410 25.424 295 158 8 135 423 2 240 9.99e-21 92.8
MsG0580024981.01.T01 MTR_8g094410 35.079 191 113 5 26 215 3 183 6.21e-20 90.5
MsG0580024981.01.T01 MTR_8g094410 25.521 192 127 3 256 442 27 207 1.59e-13 71.6
MsG0580024981.01.T01 MTR_8g094410 29.310 174 115 3 31 204 60 225 3.88e-11 64.3
MsG0580024981.01.T01 MTR_3g086300 24.866 374 251 11 70 416 153 523 4.41e-20 93.2
MsG0580024981.01.T01 MTR_3g097060 26.526 426 239 13 32 437 41 412 1.31e-19 90.9
MsG0580024981.01.T01 MTR_3g097060 26.330 376 200 12 87 444 40 356 3.49e-19 89.7
MsG0580024981.01.T01 MTR_7g072410 26.066 422 224 16 24 424 233 587 2.26e-19 91.7
MsG0580024981.01.T01 MTR_7g086050 24.485 437 239 14 21 443 148 507 2.38e-19 91.7
MsG0580024981.01.T01 MTR_3g097060 26.330 376 200 12 87 444 40 356 3.21e-19 89.4
MsG0580024981.01.T01 MTR_3g097060 28.045 353 198 12 32 354 41 367 1.36e-16 81.6
MsG0580024981.01.T01 MTR_6g034795 26.119 402 205 16 55 428 267 604 3.65e-19 90.9
MsG0580024981.01.T01 MTR_4g029410 25.183 409 220 14 38 424 45 389 6.77e-19 90.1
MsG0580024981.01.T01 MTR_4g029410 25.075 335 210 12 136 443 35 355 2.46e-14 75.9
MsG0580024981.01.T01 MTR_7g063440 26.225 408 238 11 61 441 14 385 1.09e-18 87.8
MsG0580024981.01.T01 MTR_7g063440 35.758 165 84 8 28 185 236 385 7.76e-15 76.3
MsG0580024981.01.T01 MTR_7g063440 26.225 408 238 11 61 441 106 477 1.31e-18 88.6
MsG0580024981.01.T01 MTR_7g063440 35.758 165 84 8 28 185 328 477 1.13e-14 76.3
MsG0580024981.01.T01 MTR_3g069030 25.701 428 232 15 49 441 83 459 3.85e-18 87.0
MsG0580024981.01.T01 MTR_3g069030 36.810 163 87 6 28 185 308 459 5.97e-13 70.9
MsG0580024981.01.T01 MTR_3g109650 24.444 405 203 14 65 417 75 428 1.01e-17 85.9
MsG0580024981.01.T01 MTR_8g094410 37.162 148 88 3 68 215 2 144 1.05e-17 83.2
MsG0580024981.01.T01 MTR_8g094410 25.490 255 129 7 175 423 2 201 1.31e-15 77.4
MsG0580024981.01.T01 MTR_8g094410 26.404 178 115 3 270 442 2 168 1.46e-11 65.1
MsG0580024981.01.T01 MTR_8g094410 29.310 174 115 3 31 204 21 186 3.09e-11 64.3
MsG0580024981.01.T01 MTR_7g016640 27.425 299 146 9 52 328 162 411 2.39e-17 84.3
MsG0580024981.01.T01 MTR_7g016640 27.049 366 208 18 66 390 65 412 3.36e-14 74.7
MsG0580024981.01.T01 MTR_7g016640 29.798 198 113 7 246 435 41 220 2.99e-11 65.5
MsG0580024981.01.T01 MTR_2g079610 27.302 315 171 7 135 442 128 391 2.43e-17 84.7
MsG0580024981.01.T01 MTR_5g038220 26.494 385 218 14 84 433 16 370 2.90e-17 83.6
MsG0580024981.01.T01 MTR_7g451760 35.185 162 102 2 55 216 86 244 5.33e-17 81.3
MsG0580024981.01.T01 MTR_7g047560 35.185 162 102 2 55 216 86 244 5.33e-17 81.3
MsG0580024981.01.T01 MTR_5g089900 23.724 392 220 13 64 434 326 659 6.04e-17 84.3
MsG0580024981.01.T01 MTR_1g042800 26.331 357 219 12 123 443 204 552 1.03e-16 83.6
MsG0580024981.01.T01 MTR_1g042800 23.650 389 233 16 55 403 250 614 5.36e-14 75.1
MsG0580024981.01.T01 MTR_7g016640 27.174 276 133 8 52 308 162 388 2.33e-16 80.9
MsG0580024981.01.T01 MTR_7g016640 26.531 343 194 17 68 369 67 392 3.15e-12 68.6
MsG0580024981.01.T01 MTR_7g016640 29.798 198 113 7 246 435 41 220 2.80e-11 65.5
MsG0580024981.01.T01 MTR_1g006695 23.404 376 209 9 60 402 9 338 5.28e-15 77.0
MsG0580024981.01.T01 MTR_3g064560 22.704 392 211 12 64 428 305 631 1.85e-14 76.3
MsG0580024981.01.T01 MTR_3g064560 24.014 279 172 6 158 407 292 559 6.08e-14 74.7
MsG0580024981.01.T01 MTR_0095s0070 25.083 303 156 10 141 432 33 275 1.38e-13 71.2
MsG0580024981.01.T01 MTR_0095s0070 25.424 295 154 11 26 312 28 264 2.88e-13 70.5
MsG0580024981.01.T01 MTR_0095s0070 28.846 156 105 4 292 442 28 182 1.12e-12 68.6
MsG0580024981.01.T01 MTR_0095s0070 26.943 193 122 5 256 441 52 232 4.11e-12 67.0
MsG0580024981.01.T01 MTR_3g113250 24.735 283 158 5 159 429 45 284 6.34e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024981.01.T01 AT5G48330 60.000 435 153 7 19 443 31 454 1.92e-177 504
MsG0580024981.01.T01 AT5G48330 59.908 434 154 7 19 443 31 453 3.98e-177 503
MsG0580024981.01.T01 AT3G02510 28.375 363 209 9 86 420 9 348 8.36e-28 114
MsG0580024981.01.T01 AT3G02510 34.507 142 90 2 63 203 196 335 3.80e-17 83.6
MsG0580024981.01.T01 AT3G02510 26.621 293 141 9 65 335 152 392 5.86e-17 82.8
MsG0580024981.01.T01 AT5G63860 26.667 405 225 14 28 423 36 377 2.16e-27 114
MsG0580024981.01.T01 AT5G63860 27.362 307 199 8 28 321 89 384 8.11e-22 97.8
MsG0580024981.01.T01 AT5G63860 22.423 388 245 8 58 442 10 344 3.17e-21 95.9
MsG0580024981.01.T01 AT5G63860 25.843 356 194 11 95 443 1 293 1.82e-18 87.8
MsG0580024981.01.T01 AT5G16040 27.317 410 217 10 26 420 5 348 8.28e-27 111
MsG0580024981.01.T01 AT5G16040 26.059 307 178 5 137 442 6 264 2.14e-17 84.3
MsG0580024981.01.T01 AT3G02510 27.635 351 179 8 84 420 1 290 1.50e-22 98.6
MsG0580024981.01.T01 AT3G02510 34.507 142 90 2 63 203 138 277 2.40e-17 83.2
MsG0580024981.01.T01 AT3G02510 26.621 293 141 9 65 335 94 334 2.95e-17 83.2
MsG0580024981.01.T01 AT3G02510 26.250 320 161 8 138 442 1 260 2.87e-16 80.1
MsG0580024981.01.T01 AT3G02510 27.729 339 170 8 86 411 9 285 1.15e-21 95.5
MsG0580024981.01.T01 AT3G02510 25.272 368 196 9 26 379 5 307 3.81e-16 79.3
MsG0580024981.01.T01 AT3G02510 25.237 317 166 9 137 441 6 263 9.56e-13 69.3
MsG0580024981.01.T01 AT5G12350 24.872 390 217 12 64 434 309 641 4.75e-21 97.1
MsG0580024981.01.T01 AT5G12350 24.557 395 208 17 29 401 330 656 1.01e-11 67.8
MsG0580024981.01.T01 AT5G19420 25.000 392 214 14 64 434 313 645 1.81e-20 95.1
MsG0580024981.01.T01 AT5G19420 24.297 391 218 12 64 434 313 645 1.83e-20 95.1
MsG0580024981.01.T01 AT5G19420 25.000 392 214 14 64 434 347 679 1.98e-20 95.1
MsG0580024981.01.T01 AT1G76950 25.240 416 221 16 55 442 272 625 7.22e-20 93.2
MsG0580024981.01.T01 AT3G55580 26.859 417 246 13 49 441 102 483 7.57e-20 92.4
MsG0580024981.01.T01 AT3G55580 34.146 164 90 6 28 185 332 483 1.22e-12 70.1
MsG0580024981.01.T01 AT1G65920 24.427 393 210 11 64 433 293 621 1.53e-19 92.0
MsG0580024981.01.T01 AT1G65920 24.615 325 221 10 138 443 261 580 2.43e-12 69.7
MsG0580024981.01.T01 AT1G65920 24.810 395 206 12 64 433 247 575 1.57e-19 92.0
MsG0580024981.01.T01 AT1G65920 24.615 325 221 10 138 443 215 534 2.17e-12 69.7
MsG0580024981.01.T01 AT3G53830 26.777 422 242 15 46 441 87 467 4.94e-19 89.7
MsG0580024981.01.T01 AT3G53830 27.954 347 186 15 4 328 163 467 6.03e-11 64.7
MsG0580024981.01.T01 AT3G26100 24.934 381 242 9 70 416 50 420 7.27e-19 89.0
MsG0580024981.01.T01 AT3G26100 24.934 381 242 9 70 416 50 420 7.27e-19 89.0
MsG0580024981.01.T01 AT3G26100 24.934 381 242 9 70 416 50 420 7.27e-19 89.0
MsG0580024981.01.T01 AT3G26100 24.934 381 242 9 70 416 150 520 1.08e-18 89.0
MsG0580024981.01.T01 AT3G26100 24.934 381 242 9 70 416 150 520 1.08e-18 89.0
MsG0580024981.01.T01 AT3G26100 24.934 381 242 9 70 416 150 520 1.08e-18 89.0
MsG0580024981.01.T01 AT3G53830 30.100 299 161 11 158 441 230 495 2.16e-18 87.8
MsG0580024981.01.T01 AT3G53830 27.954 347 186 15 4 328 191 495 5.98e-11 64.7
MsG0580024981.01.T01 AT5G60870 24.945 457 252 16 44 443 20 442 2.51e-18 87.4
MsG0580024981.01.T01 AT5G60870 26.857 350 174 9 65 392 154 443 1.51e-17 85.1
MsG0580024981.01.T01 AT5G42140 25.441 397 226 14 55 434 268 611 3.35e-18 88.2
MsG0580024981.01.T01 AT5G42140 25.441 397 226 14 55 434 268 611 3.35e-18 88.2
MsG0580024981.01.T01 AT1G27060 26.667 390 228 10 28 417 17 348 3.90e-18 86.3
MsG0580024981.01.T01 AT3G03790 26.173 405 213 13 17 405 141 475 7.15e-18 87.0
MsG0580024981.01.T01 AT3G15430 25.061 411 244 8 43 444 38 393 8.44e-18 85.9
MsG0580024981.01.T01 AT3G15430 25.061 411 244 8 43 444 38 393 8.44e-18 85.9
MsG0580024981.01.T01 AT3G15430 25.061 411 244 8 43 444 38 393 8.44e-18 85.9
MsG0580024981.01.T01 AT3G15430 25.061 411 244 8 43 444 38 393 8.44e-18 85.9
MsG0580024981.01.T01 AT3G15430 25.061 411 244 8 43 444 38 393 8.44e-18 85.9
MsG0580024981.01.T01 AT3G15430 25.061 411 244 8 43 444 38 393 8.44e-18 85.9
MsG0580024981.01.T01 AT5G60870 26.801 347 185 9 65 392 154 450 1.07e-17 85.5
MsG0580024981.01.T01 AT5G60870 30.178 169 108 4 55 216 254 419 2.09e-14 75.5
MsG0580024981.01.T01 AT5G08710 26.222 450 252 16 19 442 36 431 1.44e-17 85.1
MsG0580024981.01.T01 AT5G16040 26.144 306 177 5 137 441 6 263 2.01e-17 83.6
MsG0580024981.01.T01 AT5G16040 25.538 372 194 11 26 381 5 309 1.28e-16 81.3
MsG0580024981.01.T01 AT3G03790 26.271 354 185 10 65 405 188 478 2.87e-17 85.1
MsG0580024981.01.T01 AT3G03790 28.082 292 156 10 16 296 192 440 4.78e-14 75.1
MsG0580024981.01.T01 AT3G03790 26.271 354 185 10 65 405 188 478 3.47e-17 85.1
MsG0580024981.01.T01 AT3G03790 28.082 292 156 10 16 296 192 440 5.62e-14 75.1
MsG0580024981.01.T01 AT5G60870 30.864 162 109 3 55 216 85 243 5.13e-17 81.3
MsG0580024981.01.T01 AT5G60870 33.571 140 84 3 53 185 134 271 2.31e-14 73.6
MsG0580024981.01.T01 AT3G23270 26.178 382 215 14 80 443 209 541 6.28e-17 84.0
MsG0580024981.01.T01 AT3G23270 24.171 422 229 18 48 441 235 593 1.46e-16 82.8
MsG0580024981.01.T01 AT3G23270 26.178 382 215 14 80 443 213 545 6.36e-17 84.0
MsG0580024981.01.T01 AT3G23270 24.171 422 229 18 48 441 239 597 1.39e-16 83.2
MsG0580024981.01.T01 AT4G14368 25.392 319 187 10 132 443 285 559 7.33e-17 84.0
MsG0580024981.01.T01 AT4G14368 25.063 395 209 17 55 424 261 593 1.39e-16 83.2
MsG0580024981.01.T01 AT4G14368 25.472 318 186 10 132 442 285 558 8.56e-17 83.6
MsG0580024981.01.T01 AT4G14368 25.127 394 208 17 55 423 261 592 4.02e-16 81.6
MsG0580024981.01.T01 AT4G14368 25.472 318 186 10 132 442 278 551 9.50e-17 83.6
MsG0580024981.01.T01 AT4G14368 25.127 394 208 17 55 423 254 585 4.54e-16 81.6
MsG0580024981.01.T01 AT4G14368 25.472 318 186 10 132 442 283 556 9.86e-17 83.6
MsG0580024981.01.T01 AT4G14368 25.127 394 208 17 55 423 259 590 4.35e-16 81.6
MsG0580024981.01.T01 AT3G02300 27.243 301 149 11 65 336 168 427 3.57e-16 80.9
MsG0580024981.01.T01 AT3G02300 24.242 363 222 11 66 390 64 411 1.21e-13 73.2
MsG0580024981.01.T01 AT3G02300 30.851 188 107 5 268 441 64 242 3.88e-12 68.6
MsG0580024981.01.T01 AT3G02300 27.243 301 149 11 65 336 179 438 3.57e-16 80.9
MsG0580024981.01.T01 AT3G02300 24.242 363 222 11 66 390 75 422 1.07e-13 73.2
MsG0580024981.01.T01 AT3G02300 35.172 145 80 4 268 407 75 210 3.94e-12 68.6
MsG0580024981.01.T01 AT5G60870 27.953 254 131 5 65 312 154 361 6.22e-16 79.7
MsG0580024981.01.T01 AT5G60870 31.818 132 87 3 55 186 254 382 6.29e-12 67.4
MsG0580024981.01.T01 AT5G11580 25.513 439 222 15 28 413 37 423 6.49e-16 80.5
MsG0580024981.01.T01 AT5G11580 26.448 397 204 14 61 416 14 363 3.16e-14 75.1
MsG0580024981.01.T01 AT1G19880 26.710 307 152 8 159 444 45 299 1.18e-14 76.6
MsG0580024981.01.T01 AT3G47660 28.028 289 178 12 46 312 253 533 4.83e-14 75.1
MsG0580024981.01.T01 AT3G47660 24.368 435 241 19 30 442 186 554 8.06e-14 74.3
MsG0580024981.01.T01 AT3G47660 28.028 289 178 12 46 312 186 466 4.91e-14 75.1
MsG0580024981.01.T01 AT3G47660 24.368 435 241 19 30 442 119 487 8.41e-14 74.3
MsG0580024981.01.T01 AT3G47660 27.419 310 191 13 46 329 367 668 8.69e-14 74.3
MsG0580024981.01.T01 AT3G47660 24.138 435 242 18 30 442 300 668 1.47e-13 73.6
MsG0580024981.01.T01 AT3G47660 27.419 310 191 13 46 329 331 632 9.28e-14 74.3
MsG0580024981.01.T01 AT3G47660 24.368 435 241 19 30 442 264 632 1.13e-13 73.9
MsG0580024981.01.T01 AT3G47660 27.419 310 191 13 46 329 328 629 9.43e-14 74.3
MsG0580024981.01.T01 AT3G47660 24.368 435 241 19 30 442 261 629 1.01e-13 73.9
MsG0580024981.01.T01 AT3G47660 27.419 310 191 13 46 329 328 629 9.43e-14 74.3
MsG0580024981.01.T01 AT3G47660 24.368 435 241 19 30 442 261 629 1.01e-13 73.9
MsG0580024981.01.T01 AT3G47660 27.419 310 191 13 46 329 331 632 1.08e-13 73.9
MsG0580024981.01.T01 AT3G47660 24.368 435 241 19 30 442 264 632 1.20e-13 73.9
MsG0580024981.01.T01 AT1G69710 26.246 301 190 9 136 407 247 544 2.18e-13 73.2
MsG0580024981.01.T01 AT1G69710 29.289 239 144 9 65 281 396 631 2.53e-11 66.6
MsG0580024981.01.T01 AT1G69710 26.246 301 190 9 136 407 260 557 2.64e-13 72.8
MsG0580024981.01.T01 AT1G69710 29.661 236 141 9 68 281 412 644 2.85e-11 66.2
MsG0580024981.01.T01 AT5G08710 25.959 339 173 13 87 407 54 332 8.06e-13 69.7
MsG0580024981.01.T01 AT5G08710 26.781 351 191 13 19 357 36 332 1.39e-12 68.9

Find 183 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACACATCTTTGAACTTAAA+AGG 0.155222 5:+12484521 None:intergenic
TGATGGCTCTGTTTGGGTTT+GGG 0.156700 5:-12486635 MsG0580024981.01.T01:CDS
CTGAAGCTGTTCTGCCTTCT+AGG 0.180347 5:-12486570 MsG0580024981.01.T01:CDS
TCTAACCCCTCCACTCTTCT+TGG 0.209669 5:+12486715 None:intergenic
CAAAATTTGAAAACCTTCTA+AGG 0.230502 5:+12484697 None:intergenic
CCACTTCACAAGGCGATCTT+TGG 0.235793 5:-12486804 MsG0580024981.01.T01:CDS
AGATGGAAGGATAGGGAATA+TGG 0.260984 5:-12485608 MsG0580024981.01.T01:CDS
AGACTAACATGCCAATAATA+TGG 0.268553 5:-12485462 MsG0580024981.01.T01:CDS
ATGATGGCTCTGTTTGGGTT+TGG 0.273871 5:-12486636 MsG0580024981.01.T01:CDS
GCCTTGATTGATGCGTTGGC+TGG 0.288036 5:-12484866 MsG0580024981.01.T01:CDS
CACAAGGCGATCTTTGGGCT+TGG 0.291957 5:-12486798 MsG0580024981.01.T01:CDS
CTGTGGATGGCCAGCTGTTT+GGG 0.297607 5:-12485645 MsG0580024981.01.T01:CDS
GGGGCGAGCTAGAGAAGATT+TGG 0.300080 5:-12485071 MsG0580024981.01.T01:CDS
AAGTCCAAGTTGTCCCCTTT+TGG 0.301219 5:+12486606 None:intergenic
ACAAGGCGATCTTTGGGCTT+GGG 0.310684 5:-12486797 MsG0580024981.01.T01:CDS
AGGCGAGGTTCCCATATTAT+TGG 0.321168 5:+12485451 None:intergenic
CAACAACATTTATTTACAAT+TGG 0.321991 5:+12484440 None:intergenic
CATAATCTGGTTCTTGTTGC+TGG 0.330642 5:-12484653 MsG0580024981.01.T01:CDS
GATGGTGCCCTCTTGAGTTC+TGG 0.335543 5:-12485115 MsG0580024981.01.T01:CDS
GAAACAGGTCTCGTTTGGTT+GGG 0.339280 5:-12485686 MsG0580024981.01.T01:intron
CCAACAACCACCGTTGGTAT+AGG 0.342749 5:-12486913 MsG0580024981.01.T01:CDS
AGCGGGGCTTGGCCACTCTT+TGG 0.346640 5:-12485005 MsG0580024981.01.T01:CDS
CACTTCACAAGGCGATCTTT+GGG 0.348125 5:-12486803 MsG0580024981.01.T01:CDS
GTCTGGGTTTGATCATAATC+TGG 0.355645 5:-12484666 MsG0580024981.01.T01:CDS
TCAGATAGTAATGTCACTTT+GGG 0.357204 5:-12484962 MsG0580024981.01.T01:CDS
CACTTGAACTGGAATCTAAT+GGG 0.360202 5:+12485563 None:intergenic
ACTGTGGATGGCCAGCTGTT+TGG 0.364447 5:-12485646 MsG0580024981.01.T01:CDS
AGCCCCGCTGCTACGGAAAC+AGG 0.364716 5:+12485019 None:intergenic
TTCAGCAGGGCGTGCACATT+CGG 0.368046 5:-12484825 MsG0580024981.01.T01:CDS
GAAATGTGGGTCTGGGGATC+TGG 0.369104 5:-12484782 MsG0580024981.01.T01:CDS
GCACTTGAACTGGAATCTAA+TGG 0.371003 5:+12485562 None:intergenic
TATTCTAATTGTTAAGAGTA+AGG 0.374164 5:-12484323 MsG0580024981.01.T01:three_prime_UTR
TCAGAAGGTAAAGAAGGAAT+TGG 0.376055 5:+12486868 None:intergenic
TAGAAACAACGAAGCCCAAC+TGG 0.377481 5:-12486773 MsG0580024981.01.T01:CDS
TTGGTGATGATGGCTCTGTT+TGG 0.382493 5:-12486642 MsG0580024981.01.T01:CDS
ACTCCTGTTTCCGTAGCAGC+GGG 0.387778 5:-12485022 MsG0580024981.01.T01:CDS
GGATGGCCAGCTGTTTGGGT+GGG 0.388469 5:-12485641 MsG0580024981.01.T01:CDS
GTTTCCGTAGCAGCGGGGCT+TGG 0.395218 5:-12485016 MsG0580024981.01.T01:CDS
GATGGCTCTGTTTGGGTTTG+GGG 0.399060 5:-12486634 MsG0580024981.01.T01:CDS
CTCTTTAAAGCTTAAACTAA+AGG 0.399840 5:-12484499 MsG0580024981.01.T01:three_prime_UTR
AGTAACGTGTATGGCCAATT+GGG 0.400946 5:-12485091 MsG0580024981.01.T01:CDS
CAAAAGGAGAAATGTGGGTC+TGG 0.402480 5:-12484790 MsG0580024981.01.T01:CDS
TCGTGTTGTGTTGGTGATGA+TGG 0.405730 5:-12486652 MsG0580024981.01.T01:CDS
TGGTGATGATGGCTCTGTTT+GGG 0.406746 5:-12486641 MsG0580024981.01.T01:CDS
TGATTGAAACAGGTCTCGTT+TGG 0.413513 5:-12485691 MsG0580024981.01.T01:intron
CGCCCTGCTGAAACTGAAAC+CGG 0.414741 5:+12484836 None:intergenic
TCTTTAAAGCTTAAACTAAA+GGG 0.414926 5:-12484498 MsG0580024981.01.T01:three_prime_UTR
GGTTCACTAAATTTAGTAAC+CGG 0.417729 5:-12484598 MsG0580024981.01.T01:three_prime_UTR
TCCTGCCTTGATTGATGCGT+TGG 0.421410 5:-12484870 MsG0580024981.01.T01:CDS
GATGGCCAGCTGTTTGGGTG+GGG 0.422149 5:-12485640 MsG0580024981.01.T01:CDS
AATAATATGGGAACCTCGCC+TGG 0.424364 5:-12485449 MsG0580024981.01.T01:CDS
GTTTGAAAATGCACTTGAAC+TGG 0.426915 5:+12485552 None:intergenic
TGCGTTGGCTGGGGAAAATC+CGG 0.427799 5:-12484855 MsG0580024981.01.T01:CDS
CTTCTCTAGCTCGCCCCAAT+TGG 0.427816 5:+12485077 None:intergenic
AAGTAACGTGTATGGCCAAT+TGG 0.428223 5:-12485092 MsG0580024981.01.T01:CDS
GGGCGAGCTAGAGAAGATTT+GGG 0.429340 5:-12485070 MsG0580024981.01.T01:CDS
ATCAGATAGTAATGTCACTT+TGG 0.429388 5:-12484963 MsG0580024981.01.T01:CDS
CCTTGATTGATGCGTTGGCT+GGG 0.431283 5:-12484865 MsG0580024981.01.T01:CDS
AATTGGATCAAGGGAGTGCT+TGG 0.433676 5:+12484457 None:intergenic
GGAGTGAACTTTATGTCAAC+AGG 0.436438 5:+12485040 None:intergenic
GAAAGTGCTTCAACCCTAGA+AGG 0.437657 5:+12486556 None:intergenic
AGTTCTCAGCTAGGACGGGC+AGG 0.440448 5:-12484905 MsG0580024981.01.T01:CDS
TGGATGGCCAGCTGTTTGGG+TGG 0.443368 5:-12485642 MsG0580024981.01.T01:CDS
GACTACAGATATTGCTTCAT+GGG 0.446195 5:-12484939 MsG0580024981.01.T01:CDS
ACACATCTTTGAACTTAAAA+GGG 0.447389 5:+12484522 None:intergenic
CATTTAATCATGAATAAAGA+TGG 0.448731 5:-12484369 MsG0580024981.01.T01:three_prime_UTR
TGAAGCTGTTCTGCCTTCTA+GGG 0.448975 5:-12486569 MsG0580024981.01.T01:CDS
AAACAGGTCTCGTTTGGTTG+GGG 0.450780 5:-12485685 MsG0580024981.01.T01:intron
TGAAACAGGTCTCGTTTGGT+TGG 0.450912 5:-12485687 MsG0580024981.01.T01:intron
ATTTATTTACAATTGGATCA+AGG 0.459687 5:+12484447 None:intergenic
CAAGGCGATCTTTGGGCTTG+GGG 0.460820 5:-12486796 MsG0580024981.01.T01:CDS
ATCAATCAAGGCAGGAAGAT+AGG 0.464337 5:+12484877 None:intergenic
CCTATACCAACGGTGGTTGT+TGG 0.466016 5:+12486913 None:intergenic
AATCCGGTTTCAGTTTCAGC+AGG 0.467662 5:-12484839 MsG0580024981.01.T01:CDS
ATGAGCACGGTGATGAGTTT+CGG 0.468069 5:-12486964 MsG0580024981.01.T01:CDS
ATCATCTTTACTACTTATCA+AGG 0.468134 5:+12484395 None:intergenic
GGAAAGCCCACGACCCAGTT+GGG 0.471539 5:+12486759 None:intergenic
TTAGAAAATGTGAAGGTTTG+TGG 0.475248 5:-12486697 MsG0580024981.01.T01:CDS
AAAAGGAGAAATGTGGGTCT+GGG 0.480674 5:-12484789 MsG0580024981.01.T01:CDS
AACGAAGCCCAACTGGGTCG+TGG 0.486773 5:-12486766 MsG0580024981.01.T01:CDS
TCGGTTGCTCTCACATCAAA+AGG 0.487958 5:-12484806 MsG0580024981.01.T01:CDS
ATTTAATCATGAATAAAGAT+GGG 0.493498 5:-12484368 MsG0580024981.01.T01:three_prime_UTR
GAAAACCTTCTAAGGAATCC+AGG 0.497690 5:+12484705 None:intergenic
GGACTACAGATATTGCTTCA+TGG 0.498556 5:-12484940 MsG0580024981.01.T01:CDS
GACTAACATGCCAATAATAT+GGG 0.499069 5:-12485461 MsG0580024981.01.T01:CDS
CCCAGCCAACGCATCAATCA+AGG 0.500231 5:+12484865 None:intergenic
TATTATGCAGATGGAAGGAT+AGG 0.501045 5:-12485616 MsG0580024981.01.T01:CDS
GGCGATCACAGAGAATATTC+CGG 0.501138 5:-12487032 MsG0580024981.01.T01:CDS
GTGGCCAAGCCCCGCTGCTA+CGG 0.501725 5:+12485012 None:intergenic
TCAACAAATGCCTTAGTGCT+AGG 0.503940 5:-12484619 MsG0580024981.01.T01:three_prime_UTR
TCTAAGGAATCCAGGTAAAA+CGG 0.504606 5:+12484713 None:intergenic
TTTATTTACAATTGGATCAA+GGG 0.505190 5:+12484448 None:intergenic
ATGGCTCTGTTTGGGTTTGG+GGG 0.506439 5:-12486633 MsG0580024981.01.T01:CDS
ATCAAGGCAGGAAGATAGGC+AGG 0.508105 5:+12484881 None:intergenic
GGTAAAGAAGGAATTGGAGT+TGG 0.508424 5:+12486874 None:intergenic
TTCTCCAGAAAACGTAGTTA+AGG 0.508526 5:-12486536 MsG0580024981.01.T01:intron
AACATAGGAAAGAGTGTACA+AGG 0.509568 5:-12484557 MsG0580024981.01.T01:three_prime_UTR
CTTGATTGATGCGTTGGCTG+GGG 0.510648 5:-12484864 MsG0580024981.01.T01:CDS
GATGGAAGGATAGGGAATAT+GGG 0.512559 5:-12485607 MsG0580024981.01.T01:CDS
CGGAAAGCCCACGACCCAGT+TGG 0.514415 5:+12486758 None:intergenic
ACAATATCAGAAGGTAAAGA+AGG 0.516505 5:+12486862 None:intergenic
TCACCGTGCTCATCCATCTC+CGG 0.521429 5:+12486974 None:intergenic
CGGTTGTTATCCACCGGAGA+TGG 0.522709 5:-12486987 MsG0580024981.01.T01:CDS
AAAGAAAGTCTTACAAGGAA+TGG 0.524779 5:-12485491 MsG0580024981.01.T01:CDS
ATGTCCAAAAGGGGACAACT+TGG 0.525312 5:-12486610 MsG0580024981.01.T01:CDS
CTCATTCCATGTTTCTCTAG+CGG 0.530612 5:+12486738 None:intergenic
AAAGAACTAAAGAGTGATCA+AGG 0.530943 5:+12485383 None:intergenic
TACTATCTGATTCATCAAGC+TGG 0.532238 5:+12484975 None:intergenic
GGTGTTGTTTCGTGTTGTGT+TGG 0.534055 5:-12486661 MsG0580024981.01.T01:CDS
AATAGCCCCACCCAAACAGC+TGG 0.534190 5:+12485635 None:intergenic
CACTCCTGTTTCCGTAGCAG+CGG 0.534340 5:-12485023 MsG0580024981.01.T01:CDS
CCAAAGATCGCCTTGTGAAG+TGG 0.541795 5:+12486804 None:intergenic
AGTTCTGGAAGTAACGTGTA+TGG 0.542194 5:-12485100 MsG0580024981.01.T01:CDS
GACGGAACCCACGGAGCACT+CGG 0.542264 5:-12486940 MsG0580024981.01.T01:CDS
AAAAGGGGACAACTTGGACT+TGG 0.548121 5:-12486604 MsG0580024981.01.T01:CDS
ACTGCGTGGCGTTCAAGTTG+TGG 0.548356 5:-12485419 MsG0580024981.01.T01:CDS
GGGTGGGGCTATTATGCAGA+TGG 0.551116 5:-12485625 MsG0580024981.01.T01:CDS
CACATCAAAAGGAGAAATGT+GGG 0.554457 5:-12484795 MsG0580024981.01.T01:CDS
CCCGTCCTAGCTGAGAACTC+TGG 0.559607 5:+12484909 None:intergenic
TGCGAGAGAGTGGTAGTGAC+CGG 0.560541 5:+12486828 None:intergenic
AGTAGAAAAGAAAAGAAATG+TGG 0.565409 5:-12487053 MsG0580024981.01.T01:exon
TGGTAAACCGAGTGCTCCGT+GGG 0.572538 5:+12486933 None:intergenic
CAATTAGAATAATTCTGAAG+TGG 0.574757 5:+12484335 None:intergenic
ATTTAGTGAACCTAGCACTA+AGG 0.575101 5:+12484609 None:intergenic
GTTCTCAGCTAGGACGGGCA+GGG 0.575236 5:-12484904 MsG0580024981.01.T01:CDS
CGCAGTTCTTCAACCAGGCG+AGG 0.575726 5:+12485436 None:intergenic
ACCAGAGTTCTCAGCTAGGA+CGG 0.577035 5:-12484910 MsG0580024981.01.T01:CDS
CCAGAGTTCTCAGCTAGGAC+GGG 0.578114 5:-12484909 MsG0580024981.01.T01:CDS
ACGAAGCCCAACTGGGTCGT+GGG 0.579776 5:-12486765 MsG0580024981.01.T01:CDS
TCACATCAAAAGGAGAAATG+TGG 0.579944 5:-12484796 MsG0580024981.01.T01:CDS
GAATATGGGGAATGATCACT+TGG 0.580284 5:-12485593 MsG0580024981.01.T01:CDS
GCTCTTGCATTAACTGTGGA+TGG 0.580684 5:-12485658 MsG0580024981.01.T01:CDS
TTGGTAAACCGAGTGCTCCG+TGG 0.581895 5:+12486932 None:intergenic
GCCAACGCATCAATCAAGGC+AGG 0.582821 5:+12484869 None:intergenic
CCGCCGCGGTTGTTATCCAC+CGG 0.586164 5:-12486993 MsG0580024981.01.T01:CDS
AGTCTTACAAGGAATGGCAG+AGG 0.587231 5:-12485485 MsG0580024981.01.T01:CDS
GGTTTACCAACAACCACCGT+TGG 0.588291 5:-12486919 MsG0580024981.01.T01:CDS
TTAAAGCTTAAACTAAAGGG+TGG 0.590686 5:-12484495 MsG0580024981.01.T01:three_prime_UTR
CGCCACGCAGTTCTTCAACC+AGG 0.592349 5:+12485431 None:intergenic
AACAGGTCTCGTTTGGTTGG+GGG 0.594975 5:-12485684 MsG0580024981.01.T01:intron
GTGGTAGTGACCGGCGTGGA+CGG 0.596464 5:+12486837 None:intergenic
CGTTACTTCCAGAACTCAAG+AGG 0.596715 5:+12485107 None:intergenic
ATGGAAGGATAGGGAATATG+GGG 0.598459 5:-12485606 MsG0580024981.01.T01:CDS
AACAGATAAGAAAATAACAT+AGG 0.605445 5:-12484572 MsG0580024981.01.T01:three_prime_UTR
AGTTTCGGCGACGGAACCCA+CGG 0.608836 5:-12486949 MsG0580024981.01.T01:CDS
AAAGGAGAAATGTGGGTCTG+GGG 0.610343 5:-12484788 MsG0580024981.01.T01:CDS
GAATGAGCCAAGAAGAGTGG+AGG 0.612574 5:-12486722 MsG0580024981.01.T01:CDS
ATGGAATGAGCCAAGAAGAG+TGG 0.613681 5:-12486725 MsG0580024981.01.T01:CDS
GGCTTTCCGCTAGAGAAACA+TGG 0.616376 5:-12486744 MsG0580024981.01.T01:CDS
GATATTGTTACCGTCCACGC+CGG 0.620563 5:-12486847 MsG0580024981.01.T01:CDS
GTGAAGTGGTTGCGAGAGAG+TGG 0.623822 5:+12486818 None:intergenic
TTTAATCATGAATAAAGATG+GGG 0.624732 5:-12484367 MsG0580024981.01.T01:three_prime_UTR
AATGAGCCAAGAAGAGTGGA+GGG 0.624889 5:-12486721 MsG0580024981.01.T01:CDS
GCTGAAAAGAAAGTCTTACA+AGG 0.625036 5:-12485496 MsG0580024981.01.T01:CDS
CCGTGCTCATCCATCTCCGG+TGG 0.625588 5:+12486977 None:intergenic
TGCGTGTGTTCCTATACCAA+CGG 0.630934 5:+12486903 None:intergenic
GTAACGTGTATGGCCAATTG+GGG 0.635104 5:-12485090 MsG0580024981.01.T01:CDS
ATCCGGTTTCAGTTTCAGCA+GGG 0.636572 5:-12484838 MsG0580024981.01.T01:CDS
ATTATGCAGATGGAAGGATA+GGG 0.638426 5:-12485615 MsG0580024981.01.T01:CDS
GGAGGGGTTAGAAAATGTGA+AGG 0.639727 5:-12486704 MsG0580024981.01.T01:CDS
GCTGGCATATTGCCAAAGAG+TGG 0.644997 5:+12484993 None:intergenic
GGGGCTATTATGCAGATGGA+AGG 0.650368 5:-12485621 MsG0580024981.01.T01:CDS
GCACGCTCTTGCATTAACTG+TGG 0.652360 5:-12485662 MsG0580024981.01.T01:CDS
TCTCTCGCAACCACTTCACA+AGG 0.655415 5:-12486814 MsG0580024981.01.T01:CDS
ACTACAGATATTGCTTCATG+GGG 0.658687 5:-12484938 MsG0580024981.01.T01:CDS
AGAAACAACGAAGCCCAACT+GGG 0.659931 5:-12486772 MsG0580024981.01.T01:CDS
CAAGTTGTGGACATTGCATG+TGG 0.663017 5:-12485406 MsG0580024981.01.T01:CDS
TGGAACCAGAGTTCTCAGCT+AGG 0.674318 5:-12484914 MsG0580024981.01.T01:CDS
ACGGTGATGAGTTTCGGCGA+CGG 0.675231 5:-12486958 MsG0580024981.01.T01:CDS
TGGACGGTAACAATATCAGA+AGG 0.675890 5:+12486853 None:intergenic
CTCCTGTTTCCGTAGCAGCG+GGG 0.681037 5:-12485021 MsG0580024981.01.T01:CDS
CAGATAGTAATGTCACTTTG+GGG 0.684131 5:-12484961 MsG0580024981.01.T01:CDS
CCACCGGAGATGGATGAGCA+CGG 0.687533 5:-12486977 MsG0580024981.01.T01:CDS
ACTTGAACTGGAATCTAATG+GGG 0.688668 5:+12485564 None:intergenic
GTTACTTCCAGAACTCAAGA+GGG 0.707147 5:+12485108 None:intergenic
ACATAGGAAAGAGTGTACAA+GGG 0.723463 5:-12484556 MsG0580024981.01.T01:three_prime_UTR
ATGAGCCAAGAAGAGTGGAG+GGG 0.735998 5:-12486720 MsG0580024981.01.T01:CDS
GAGAGTGGTAGTGACCGGCG+TGG 0.738365 5:+12486833 None:intergenic
CTACAGATATTGCTTCATGG+GGG 0.740225 5:-12484937 MsG0580024981.01.T01:CDS
TCTCCGGTGGATAACAACCG+CGG 0.747489 5:+12486990 None:intergenic
CGCCTGGTTGAAGAACTGCG+TGG 0.750941 5:-12485433 MsG0580024981.01.T01:CDS
CCGGTGGATAACAACCGCGG+CGG 0.765384 5:+12486993 None:intergenic
GTGTGTTCCTATACCAACGG+TGG 0.765520 5:+12486906 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAATCATGAATAAAGAT+GGG - Chr5:12486998-12487017 MsG0580024981.01.T01:CDS 15.0%
!!! ATATGTAATAATTTGCTAAA+AGG + Chr5:12486186-12486205 None:intergenic 15.0%
!!! TCAATTTTCTCAAATTATTA+CGG + Chr5:12485527-12485546 None:intergenic 15.0%
!!! TTAGTTCTTTTTCTAAATTT+AGG - Chr5:12485233-12485252 MsG0580024981.01.T01:intron 15.0%
!! AACAGATAAGAAAATAACAT+AGG - Chr5:12486794-12486813 MsG0580024981.01.T01:CDS 20.0%
!! ATTTATTTACAATTGGATCA+AGG + Chr5:12486922-12486941 None:intergenic 20.0%
!! CAACAACATTTATTTACAAT+TGG + Chr5:12486929-12486948 None:intergenic 20.0%
!! CATTTAATCATGAATAAAGA+TGG - Chr5:12486997-12487016 MsG0580024981.01.T01:CDS 20.0%
!! TATTCTAATTGTTAAGAGTA+AGG - Chr5:12487043-12487062 MsG0580024981.01.T01:exon 20.0%
!! TTAGTTCAAGAGTAAATTAT+CGG - Chr5:12485117-12485136 MsG0580024981.01.T01:CDS 20.0%
!! TTTAATCATGAATAAAGATG+GGG - Chr5:12486999-12487018 MsG0580024981.01.T01:CDS 20.0%
!! TTTATTTACAATTGGATCAA+GGG + Chr5:12486921-12486940 None:intergenic 20.0%
!! TTTGGTATATGAAATTGTAA+GGG - Chr5:12485140-12485159 MsG0580024981.01.T01:intron 20.0%
!!! AATGTAGATTATGTTACTTA+CGG + Chr5:12486010-12486029 None:intergenic 20.0%
!!! ATTGCATAAGTTATGTTTTT+AGG - Chr5:12484906-12484925 MsG0580024981.01.T01:CDS 20.0%
!!! TATTTTCTTATCTGTTATTC+CGG + Chr5:12486790-12486809 None:intergenic 20.0%
!!! TCTTTAAAGCTTAAACTAAA+GGG - Chr5:12486868-12486887 MsG0580024981.01.T01:CDS 20.0%
! ACACATCTTTGAACTTAAAA+GGG + Chr5:12486847-12486866 None:intergenic 25.0%
! AGTAGAAAAGAAAAGAAATG+TGG - Chr5:12484313-12484332 MsG0580024981.01.T01:three_prime_UTR 25.0%
! ATCATCTTTACTACTTATCA+AGG + Chr5:12486974-12486993 None:intergenic 25.0%
! CAAAATTTGAAAACCTTCTA+AGG + Chr5:12486672-12486691 None:intergenic 25.0%
! CCATCTTTAATACAAAGTAT+CGG - Chr5:12485596-12485615 MsG0580024981.01.T01:CDS 25.0%
! GATATAGAGACTAAATTGAA+TGG - Chr5:12485364-12485383 MsG0580024981.01.T01:intron 25.0%
! GTAAAAGAGCTTATTTGAAT+AGG + Chr5:12485491-12485510 None:intergenic 25.0%
! GTTTGGTATATGAAATTGTA+AGG - Chr5:12485139-12485158 MsG0580024981.01.T01:intron 25.0%
! TCAATGTTTACGTGATTTAT+TGG - Chr5:12485310-12485329 MsG0580024981.01.T01:intron 25.0%
! TTAAATGTAATCTCATGTGT+CGG - Chr5:12485552-12485571 MsG0580024981.01.T01:CDS 25.0%
! TTAGTCCCTTAAATTAAAGA+AGG + Chr5:12485390-12485409 None:intergenic 25.0%
!! AATGGCCTTCTTTAATTTAA+GGG - Chr5:12485382-12485401 MsG0580024981.01.T01:CDS 25.0%
!! ATTGTTTCTTTGATTGAAAC+AGG - Chr5:12485665-12485684 MsG0580024981.01.T01:CDS 25.0%
!! CAATTAGAATAATTCTGAAG+TGG + Chr5:12487034-12487053 None:intergenic 25.0%
!! CTACATTGCATAATTTTTCA+GGG - Chr5:12486023-12486042 MsG0580024981.01.T01:intron 25.0%
!! TCTACATTGCATAATTTTTC+AGG - Chr5:12486022-12486041 MsG0580024981.01.T01:intron 25.0%
!!! ATTTAGGATCACAATTTTGA+AGG - Chr5:12485249-12485268 MsG0580024981.01.T01:intron 25.0%
!!! CTCTTTAAAGCTTAAACTAA+AGG - Chr5:12486867-12486886 MsG0580024981.01.T01:CDS 25.0%
AAAGAAAGTCTTACAAGGAA+TGG - Chr5:12485875-12485894 MsG0580024981.01.T01:intron 30.0%
AAAGAACTAAAGAGTGATCA+AGG + Chr5:12485986-12486005 None:intergenic 30.0%
ACAATATCAGAAGGTAAAGA+AGG + Chr5:12484507-12484526 None:intergenic 30.0%
AGACTAACATGCCAATAATA+TGG - Chr5:12485904-12485923 MsG0580024981.01.T01:intron 30.0%
ATAACTTATGCAATGCATGT+AGG + Chr5:12484900-12484919 None:intergenic 30.0%
CCGATACTTTGTATTAAAGA+TGG + Chr5:12485599-12485618 None:intergenic 30.0%
CTTAATTAAGCTCTCTTACA+TGG - Chr5:12484861-12484880 MsG0580024981.01.T01:CDS 30.0%
GACACATCTTTGAACTTAAA+AGG + Chr5:12486848-12486867 None:intergenic 30.0%
GACTAACATGCCAATAATAT+GGG - Chr5:12485905-12485924 MsG0580024981.01.T01:intron 30.0%
GGTTCACTAAATTTAGTAAC+CGG - Chr5:12486768-12486787 MsG0580024981.01.T01:CDS 30.0%
TTAAAGCTTAAACTAAAGGG+TGG - Chr5:12486871-12486890 MsG0580024981.01.T01:CDS 30.0%
TTAGAAAATGTGAAGGTTTG+TGG - Chr5:12484669-12484688 MsG0580024981.01.T01:CDS 30.0%
TTCCAATTTCCTTATGTTCA+GGG - Chr5:12486102-12486121 MsG0580024981.01.T01:intron 30.0%
TTTCCAATTTCCTTATGTTC+AGG - Chr5:12486101-12486120 MsG0580024981.01.T01:intron 30.0%
! AGAAGGTTTTCAAATTTTGC+AGG - Chr5:12486673-12486692 MsG0580024981.01.T01:CDS 30.0%
! ATCAGATAGTAATGTCACTT+TGG - Chr5:12486403-12486422 MsG0580024981.01.T01:intron 30.0%
! GAATGGCCTTCTTTAATTTA+AGG - Chr5:12485381-12485400 MsG0580024981.01.T01:CDS 30.0%
! TCAAGAGTAAATTATCGGTT+TGG - Chr5:12485122-12485141 MsG0580024981.01.T01:intron 30.0%
!! TCAGATAGTAATGTCACTTT+GGG - Chr5:12486404-12486423 MsG0580024981.01.T01:intron 30.0%
!!! ACGTGATTTATTGGTTTTGA+TGG - Chr5:12485319-12485338 MsG0580024981.01.T01:intron 30.0%
!!! ATGTTGTTGTTACTTTTGTC+TGG - Chr5:12486940-12486959 MsG0580024981.01.T01:CDS 30.0%
!!! TTGCTATTTTGTGAATCCAA+AGG - Chr5:12485415-12485434 MsG0580024981.01.T01:CDS 30.0%
ACTACAGATATTGCTTCATG+GGG - Chr5:12486428-12486447 MsG0580024981.01.T01:intron 35.0%
ACTTGAACTGGAATCTAATG+GGG + Chr5:12485805-12485824 None:intergenic 35.0%
ATTATGCAGATGGAAGGATA+GGG - Chr5:12485751-12485770 MsG0580024981.01.T01:intron 35.0%
ATTTAGTGAACCTAGCACTA+AGG + Chr5:12486760-12486779 None:intergenic 35.0%
CACATCAAAAGGAGAAATGT+GGG - Chr5:12486571-12486590 MsG0580024981.01.T01:CDS 35.0%
CACTTGAACTGGAATCTAAT+GGG + Chr5:12485806-12485825 None:intergenic 35.0%
CTGACAATGTTGATATTGCT+AGG + Chr5:12484996-12485015 None:intergenic 35.0%
GACTACAGATATTGCTTCAT+GGG - Chr5:12486427-12486446 MsG0580024981.01.T01:intron 35.0%
GCATAGCTTATTCAAACACA+TGG - Chr5:12485623-12485642 MsG0580024981.01.T01:CDS 35.0%
GCTGAAAAGAAAGTCTTACA+AGG - Chr5:12485870-12485889 MsG0580024981.01.T01:intron 35.0%
GTTTGAAAATGCACTTGAAC+TGG + Chr5:12485817-12485836 None:intergenic 35.0%
TACTATCTGATTCATCAAGC+TGG + Chr5:12486394-12486413 None:intergenic 35.0%
TATTATGCAGATGGAAGGAT+AGG - Chr5:12485750-12485769 MsG0580024981.01.T01:intron 35.0%
TCACATCAAAAGGAGAAATG+TGG - Chr5:12486570-12486589 MsG0580024981.01.T01:CDS 35.0%
TCAGAAGGTAAAGAAGGAAT+TGG + Chr5:12484501-12484520 None:intergenic 35.0%
TCTAAGGAATCCAGGTAAAA+CGG + Chr5:12486656-12486675 None:intergenic 35.0%
TCTGGTAAAAATGGTAGACT+TGG - Chr5:12486602-12486621 MsG0580024981.01.T01:CDS 35.0%
TTCTCCAGAAAACGTAGTTA+AGG - Chr5:12484830-12484849 MsG0580024981.01.T01:CDS 35.0%
! AACATAGGAAAGAGTGTACA+AGG - Chr5:12486809-12486828 MsG0580024981.01.T01:CDS 35.0%
! ACATAGGAAAGAGTGTACAA+GGG - Chr5:12486810-12486829 MsG0580024981.01.T01:CDS 35.0%
! AGGTTTTCAAATTTTGCAGG+CGG - Chr5:12486676-12486695 MsG0580024981.01.T01:CDS 35.0%
! AGTACCTTAACTACGTTTTC+TGG + Chr5:12484837-12484856 None:intergenic 35.0%
! TTTTACCTGGATTCCTTAGA+AGG - Chr5:12486656-12486675 MsG0580024981.01.T01:CDS 35.0%
!! CAGATAGTAATGTCACTTTG+GGG - Chr5:12486405-12486424 MsG0580024981.01.T01:intron 35.0%
AAAAGGAGAAATGTGGGTCT+GGG - Chr5:12486577-12486596 MsG0580024981.01.T01:CDS 40.0%
AAGTAACGTGTATGGCCAAT+TGG - Chr5:12486274-12486293 MsG0580024981.01.T01:intron 40.0%
AGATGGAAGGATAGGGAATA+TGG - Chr5:12485758-12485777 MsG0580024981.01.T01:intron 40.0%
AGTAACGTGTATGGCCAATT+GGG - Chr5:12486275-12486294 MsG0580024981.01.T01:intron 40.0%
ATCAATCAAGGCAGGAAGAT+AGG + Chr5:12486492-12486511 None:intergenic 40.0%
ATGGAAGGATAGGGAATATG+GGG - Chr5:12485760-12485779 MsG0580024981.01.T01:intron 40.0%
CAACTTTGTCCCTGAACATA+AGG + Chr5:12486114-12486133 None:intergenic 40.0%
CAATGTTGATATTGCTAGGC+TGG + Chr5:12484992-12485011 None:intergenic 40.0%
CGTCGAGCAATAAAATCCTT+TGG + Chr5:12485434-12485453 None:intergenic 40.0%
CTACAGATATTGCTTCATGG+GGG - Chr5:12486429-12486448 MsG0580024981.01.T01:intron 40.0%
CTCATTCCATGTTTCTCTAG+CGG + Chr5:12484631-12484650 None:intergenic 40.0%
GAATATGGGGAATGATCACT+TGG - Chr5:12485773-12485792 MsG0580024981.01.T01:intron 40.0%
GATGGAAGGATAGGGAATAT+GGG - Chr5:12485759-12485778 MsG0580024981.01.T01:intron 40.0%
GCACTTGAACTGGAATCTAA+TGG + Chr5:12485807-12485826 None:intergenic 40.0%
GGACTACAGATATTGCTTCA+TGG - Chr5:12486426-12486445 MsG0580024981.01.T01:intron 40.0%
GGAGTGAACTTTATGTCAAC+AGG + Chr5:12486329-12486348 None:intergenic 40.0%
GGTAAAGAAGGAATTGGAGT+TGG + Chr5:12484495-12484514 None:intergenic 40.0%
GTCCCTGAACATAAGGAAAT+TGG + Chr5:12486107-12486126 None:intergenic 40.0%
GTCTGGGTTTGATCATAATC+TGG - Chr5:12486700-12486719 MsG0580024981.01.T01:CDS 40.0%
GTTACTTCCAGAACTCAAGA+GGG + Chr5:12486261-12486280 None:intergenic 40.0%
TCAACAAATGCCTTAGTGCT+AGG - Chr5:12486747-12486766 MsG0580024981.01.T01:CDS 40.0%
TGATTGAAACAGGTCTCGTT+TGG - Chr5:12485675-12485694 MsG0580024981.01.T01:CDS 40.0%
TGGACGGTAACAATATCAGA+AGG + Chr5:12484516-12484535 None:intergenic 40.0%
! CAGGGAATCATCAATTTTGC+AGG - Chr5:12486041-12486060 MsG0580024981.01.T01:intron 40.0%
! CTTTCTTTTCAGCAACTTCG+AGG + Chr5:12485863-12485882 None:intergenic 40.0%
! GAAAACCTTCTAAGGAATCC+AGG + Chr5:12486664-12486683 None:intergenic 40.0%
!! AGTTCTGGAAGTAACGTGTA+TGG - Chr5:12486266-12486285 MsG0580024981.01.T01:intron 40.0%
!! CATAATCTGGTTCTTGTTGC+TGG - Chr5:12486713-12486732 MsG0580024981.01.T01:CDS 40.0%
!!! CGGTTTTTGGTTTTAGGTTC+CGG + Chr5:12484356-12484375 None:intergenic 40.0%
AAAAGGGGACAACTTGGACT+TGG - Chr5:12484762-12484781 MsG0580024981.01.T01:CDS 45.0%
AAACAGGTCTCGTTTGGTTG+GGG - Chr5:12485681-12485700 MsG0580024981.01.T01:CDS 45.0%
AAAGGAGAAATGTGGGTCTG+GGG - Chr5:12486578-12486597 MsG0580024981.01.T01:CDS 45.0%
AATAATATGGGAACCTCGCC+TGG - Chr5:12485917-12485936 MsG0580024981.01.T01:intron 45.0%
AATCCGGTTTCAGTTTCAGC+AGG - Chr5:12486527-12486546 MsG0580024981.01.T01:intron 45.0%
AATGAGCCAAGAAGAGTGGA+GGG - Chr5:12484645-12484664 MsG0580024981.01.T01:exon 45.0%
AGAAACAACGAAGCCCAACT+GGG - Chr5:12484594-12484613 MsG0580024981.01.T01:three_prime_UTR 45.0%
AGGCGAGGTTCCCATATTAT+TGG + Chr5:12485918-12485937 None:intergenic 45.0%
AGTCTTACAAGGAATGGCAG+AGG - Chr5:12485881-12485900 MsG0580024981.01.T01:intron 45.0%
ATCCGGTTTCAGTTTCAGCA+GGG - Chr5:12486528-12486547 MsG0580024981.01.T01:intron 45.0%
ATGAGCACGGTGATGAGTTT+CGG - Chr5:12484402-12484421 MsG0580024981.01.T01:three_prime_UTR 45.0%
ATGGAATGAGCCAAGAAGAG+TGG - Chr5:12484641-12484660 MsG0580024981.01.T01:exon 45.0%
ATGTCCAAAAGGGGACAACT+TGG - Chr5:12484756-12484775 MsG0580024981.01.T01:CDS 45.0%
CAAAAGGAGAAATGTGGGTC+TGG - Chr5:12486576-12486595 MsG0580024981.01.T01:CDS 45.0%
CAAGTTGTGGACATTGCATG+TGG - Chr5:12485960-12485979 MsG0580024981.01.T01:intron 45.0%
CACTTCACAAGGCGATCTTT+GGG - Chr5:12484563-12484582 MsG0580024981.01.T01:three_prime_UTR 45.0%
CGTTACTTCCAGAACTCAAG+AGG + Chr5:12486262-12486281 None:intergenic 45.0%
GAAACAGGTCTCGTTTGGTT+GGG - Chr5:12485680-12485699 MsG0580024981.01.T01:CDS 45.0%
GCTCTTGCATTAACTGTGGA+TGG - Chr5:12485708-12485727 MsG0580024981.01.T01:intron 45.0%
GGAGGGGTTAGAAAATGTGA+AGG - Chr5:12484662-12484681 MsG0580024981.01.T01:CDS 45.0%
GGCGATCACAGAGAATATTC+CGG - Chr5:12484334-12484353 MsG0580024981.01.T01:three_prime_UTR 45.0%
GTAACGTGTATGGCCAATTG+GGG - Chr5:12486276-12486295 MsG0580024981.01.T01:intron 45.0%
GTCTGGGGATCTGGTAAAAA+TGG - Chr5:12486593-12486612 MsG0580024981.01.T01:CDS 45.0%
TAGAAACAACGAAGCCCAAC+TGG - Chr5:12484593-12484612 MsG0580024981.01.T01:three_prime_UTR 45.0%
TCGGTTGCTCTCACATCAAA+AGG - Chr5:12486560-12486579 MsG0580024981.01.T01:CDS 45.0%
TGAAACAGGTCTCGTTTGGT+TGG - Chr5:12485679-12485698 MsG0580024981.01.T01:CDS 45.0%
TGAAGCTGTTCTGCCTTCTA+GGG - Chr5:12484797-12484816 MsG0580024981.01.T01:CDS 45.0%
TGCGTGTGTTCCTATACCAA+CGG + Chr5:12484466-12484485 None:intergenic 45.0%
! AAATTTTGCAGGCGGTGTCT+GGG - Chr5:12486684-12486703 MsG0580024981.01.T01:CDS 45.0%
! AAGTCCAAGTTGTCCCCTTT+TGG + Chr5:12484763-12484782 None:intergenic 45.0%
! ATGATGGCTCTGTTTGGGTT+TGG - Chr5:12484730-12484749 MsG0580024981.01.T01:CDS 45.0%
! GTTTGTGGTGCTTTTGCTTC+TGG - Chr5:12484684-12484703 MsG0580024981.01.T01:CDS 45.0%
! TGATGGCTCTGTTTGGGTTT+GGG - Chr5:12484731-12484750 MsG0580024981.01.T01:CDS 45.0%
!! AATTGGATCAAGGGAGTGCT+TGG + Chr5:12486912-12486931 None:intergenic 45.0%
!! GAAAGTGCTTCAACCCTAGA+AGG + Chr5:12484813-12484832 None:intergenic 45.0%
!! GGTGTTGTTTCGTGTTGTGT+TGG - Chr5:12484705-12484724 MsG0580024981.01.T01:CDS 45.0%
!! TCGTGTTGTGTTGGTGATGA+TGG - Chr5:12484714-12484733 MsG0580024981.01.T01:CDS 45.0%
!! TGGTGATGATGGCTCTGTTT+GGG - Chr5:12484725-12484744 MsG0580024981.01.T01:CDS 45.0%
!! TTGGTGATGATGGCTCTGTT+TGG - Chr5:12484724-12484743 MsG0580024981.01.T01:CDS 45.0%
AACAGGTCTCGTTTGGTTGG+GGG - Chr5:12485682-12485701 MsG0580024981.01.T01:CDS 50.0%
AACTCTCGAGTGCCCTTATC+AGG - Chr5:12486227-12486246 MsG0580024981.01.T01:intron 50.0%
ACAAGGCGATCTTTGGGCTT+GGG - Chr5:12484569-12484588 MsG0580024981.01.T01:three_prime_UTR 50.0%
ACCAGAGTTCTCAGCTAGGA+CGG - Chr5:12486456-12486475 MsG0580024981.01.T01:intron 50.0%
ATCAAGGCAGGAAGATAGGC+AGG + Chr5:12486488-12486507 None:intergenic 50.0%
ATGAGCCAAGAAGAGTGGAG+GGG - Chr5:12484646-12484665 MsG0580024981.01.T01:exon 50.0%
CAGATATTGCTTCATGGGGG+TGG - Chr5:12486432-12486451 MsG0580024981.01.T01:intron 50.0%
CCAAAGATCGCCTTGTGAAG+TGG + Chr5:12484565-12484584 None:intergenic 50.0%
CCAACAACCACCGTTGGTAT+AGG - Chr5:12484453-12484472 MsG0580024981.01.T01:three_prime_UTR 50.0%
CCACTTCACAAGGCGATCTT+TGG - Chr5:12484562-12484581 MsG0580024981.01.T01:three_prime_UTR 50.0%
CCTAAAACCAAAAACCGCCG+CGG - Chr5:12484359-12484378 MsG0580024981.01.T01:three_prime_UTR 50.0%
CCTATACCAACGGTGGTTGT+TGG + Chr5:12484456-12484475 None:intergenic 50.0%
CGTCGTTGTGTGTGAGTTTC+AGG + Chr5:12484940-12484959 None:intergenic 50.0%
CTGAAGCTGTTCTGCCTTCT+AGG - Chr5:12484796-12484815 MsG0580024981.01.T01:CDS 50.0%
GAAACTCACACACAACGACG+AGG - Chr5:12484940-12484959 MsG0580024981.01.T01:CDS 50.0%
GAATGAGCCAAGAAGAGTGG+AGG - Chr5:12484644-12484663 MsG0580024981.01.T01:exon 50.0%
GATATTGTTACCGTCCACGC+CGG - Chr5:12484519-12484538 MsG0580024981.01.T01:three_prime_UTR 50.0%
GCACGCTCTTGCATTAACTG+TGG - Chr5:12485704-12485723 MsG0580024981.01.T01:intron 50.0%
GCTGGCATATTGCCAAAGAG+TGG + Chr5:12486376-12486395 None:intergenic 50.0%
GGCTTTCCGCTAGAGAAACA+TGG - Chr5:12484622-12484641 MsG0580024981.01.T01:three_prime_UTR 50.0%
GGGCGAGCTAGAGAAGATTT+GGG - Chr5:12486296-12486315 MsG0580024981.01.T01:intron 50.0%
GGGGCTATTATGCAGATGGA+AGG - Chr5:12485745-12485764 MsG0580024981.01.T01:intron 50.0%
GGTTTACCAACAACCACCGT+TGG - Chr5:12484447-12484466 MsG0580024981.01.T01:three_prime_UTR 50.0%
GGTTTGGGGGATGTCCAAAA+GGG - Chr5:12484746-12484765 MsG0580024981.01.T01:CDS 50.0%
GTGTGTTCCTATACCAACGG+TGG + Chr5:12484463-12484482 None:intergenic 50.0%
GTTTGGGGGATGTCCAAAAG+GGG - Chr5:12484747-12484766 MsG0580024981.01.T01:CDS 50.0%
TCCTGCCTTGATTGATGCGT+TGG - Chr5:12486496-12486515 MsG0580024981.01.T01:intron 50.0%
TCTAACCCCTCCACTCTTCT+TGG + Chr5:12484654-12484673 None:intergenic 50.0%
TCTCTCGCAACCACTTCACA+AGG - Chr5:12484552-12484571 MsG0580024981.01.T01:three_prime_UTR 50.0%
TGGAACCAGAGTTCTCAGCT+AGG - Chr5:12486452-12486471 MsG0580024981.01.T01:intron 50.0%
! ACGAGGTCCATTTTGAACCG+GGG - Chr5:12484957-12484976 MsG0580024981.01.T01:CDS 50.0%
! AGGGCACCATCACCTGATAA+GGG + Chr5:12486242-12486261 None:intergenic 50.0%
! ATAACAACCGCGGCGGTTTT+TGG + Chr5:12484369-12484388 None:intergenic 50.0%
! ATGGCTCTGTTTGGGTTTGG+GGG - Chr5:12484733-12484752 MsG0580024981.01.T01:CDS 50.0%
! CAAATTTTGCAGGCGGTGTC+TGG - Chr5:12486683-12486702 MsG0580024981.01.T01:CDS 50.0%
! CGACGAGGTCCATTTTGAAC+CGG - Chr5:12484955-12484974 MsG0580024981.01.T01:CDS 50.0%
! GACGAGGTCCATTTTGAACC+GGG - Chr5:12484956-12484975 MsG0580024981.01.T01:CDS 50.0%
! GATGGCTCTGTTTGGGTTTG+GGG - Chr5:12484732-12484751 MsG0580024981.01.T01:CDS 50.0%
! TCCATTTTGAACCGGGGACA+GGG - Chr5:12484963-12484982 MsG0580024981.01.T01:CDS 50.0%
!! CCTTGATTGATGCGTTGGCT+GGG - Chr5:12486501-12486520 MsG0580024981.01.T01:intron 50.0%
!! CGAAGATGAGCCGTTTTACC+TGG - Chr5:12486643-12486662 MsG0580024981.01.T01:CDS 50.0%
!! CTTGATTGATGCGTTGGCTG+GGG - Chr5:12486502-12486521 MsG0580024981.01.T01:intron 50.0%
AATAGCCCCACCCAAACAGC+TGG + Chr5:12485734-12485753 None:intergenic 55.0%
ACCCTGTCCCCGGTTCAAAA+TGG + Chr5:12484967-12484986 None:intergenic 55.0%
ACGGTGATGAGTTTCGGCGA+CGG - Chr5:12484408-12484427 MsG0580024981.01.T01:three_prime_UTR 55.0%
ACTCCTGTTTCCGTAGCAGC+GGG - Chr5:12486344-12486363 MsG0580024981.01.T01:intron 55.0%
ACTGTGGATGGCCAGCTGTT+TGG - Chr5:12485720-12485739 MsG0580024981.01.T01:intron 55.0%
CAAGGCGATCTTTGGGCTTG+GGG - Chr5:12484570-12484589 MsG0580024981.01.T01:three_prime_UTR 55.0%
CACAAGGCGATCTTTGGGCT+TGG - Chr5:12484568-12484587 MsG0580024981.01.T01:three_prime_UTR 55.0%
CACTCCTGTTTCCGTAGCAG+CGG - Chr5:12486343-12486362 MsG0580024981.01.T01:intron 55.0%
CCAGAGTTCTCAGCTAGGAC+GGG - Chr5:12486457-12486476 MsG0580024981.01.T01:intron 55.0%
CCCAGCCAACGCATCAATCA+AGG + Chr5:12486504-12486523 None:intergenic 55.0%
CGAGTGCCCTTATCAGGTGA+TGG - Chr5:12486233-12486252 MsG0580024981.01.T01:intron 55.0%
CGCCCTGCTGAAACTGAAAC+CGG + Chr5:12486533-12486552 None:intergenic 55.0%
CGGTTGTTATCCACCGGAGA+TGG - Chr5:12484379-12484398 MsG0580024981.01.T01:three_prime_UTR 55.0%
CTGTGGATGGCCAGCTGTTT+GGG - Chr5:12485721-12485740 MsG0580024981.01.T01:intron 55.0%
GAAATGTGGGTCTGGGGATC+TGG - Chr5:12486584-12486603 MsG0580024981.01.T01:CDS 55.0%
GATGGTGCCCTCTTGAGTTC+TGG - Chr5:12486251-12486270 MsG0580024981.01.T01:intron 55.0%
GCCAACGCATCAATCAAGGC+AGG + Chr5:12486500-12486519 None:intergenic 55.0%
GGGGCGAGCTAGAGAAGATT+TGG - Chr5:12486295-12486314 MsG0580024981.01.T01:intron 55.0%
GGGTGGGGCTATTATGCAGA+TGG - Chr5:12485741-12485760 MsG0580024981.01.T01:intron 55.0%
GGGTTTGGGGGATGTCCAAA+AGG - Chr5:12484745-12484764 MsG0580024981.01.T01:CDS 55.0%
GTGAAGTGGTTGCGAGAGAG+TGG + Chr5:12484551-12484570 None:intergenic 55.0%
TCACCGTGCTCATCCATCTC+CGG + Chr5:12484395-12484414 None:intergenic 55.0%
TCTCCGGTGGATAACAACCG+CGG + Chr5:12484379-12484398 None:intergenic 55.0%
TGGTAAACCGAGTGCTCCGT+GGG + Chr5:12484436-12484455 None:intergenic 55.0%
TTCAGCAGGGCGTGCACATT+CGG - Chr5:12486541-12486560 MsG0580024981.01.T01:CDS 55.0%
TTGGTAAACCGAGTGCTCCG+TGG + Chr5:12484437-12484456 None:intergenic 55.0%
! CTTCTCTAGCTCGCCCCAAT+TGG + Chr5:12486292-12486311 None:intergenic 55.0%
! GCCTTGATTGATGCGTTGGC+TGG - Chr5:12486500-12486519 MsG0580024981.01.T01:intron 55.0%
! GTCCATTTTGAACCGGGGAC+AGG - Chr5:12484962-12484981 MsG0580024981.01.T01:CDS 55.0%
! TGCGAGAGAGTGGTAGTGAC+CGG + Chr5:12484541-12484560 None:intergenic 55.0%
!! ACTGCGTGGCGTTCAAGTTG+TGG - Chr5:12485947-12485966 MsG0580024981.01.T01:intron 55.0%
!! GAGGGCACCATCACCTGATA+AGG + Chr5:12486243-12486262 None:intergenic 55.0%
!! TGCGTTGGCTGGGGAAAATC+CGG - Chr5:12486511-12486530 MsG0580024981.01.T01:intron 55.0%
!!! CCGCGGCGGTTTTTGGTTTT+AGG + Chr5:12484362-12484381 None:intergenic 55.0%
AACGAAGCCCAACTGGGTCG+TGG - Chr5:12484600-12484619 MsG0580024981.01.T01:three_prime_UTR 60.0%
ACGAAGCCCAACTGGGTCGT+GGG - Chr5:12484601-12484620 MsG0580024981.01.T01:three_prime_UTR 60.0%
AGTTCTCAGCTAGGACGGGC+AGG - Chr5:12486461-12486480 MsG0580024981.01.T01:intron 60.0%
AGTTTCGGCGACGGAACCCA+CGG - Chr5:12484417-12484436 MsG0580024981.01.T01:three_prime_UTR 60.0%
CCACCGGAGATGGATGAGCA+CGG - Chr5:12484389-12484408 MsG0580024981.01.T01:three_prime_UTR 60.0%
CCCGTCCTAGCTGAGAACTC+TGG + Chr5:12486460-12486479 None:intergenic 60.0%
CGCAGTTCTTCAACCAGGCG+AGG + Chr5:12485933-12485952 None:intergenic 60.0%
CGCCACGCAGTTCTTCAACC+AGG + Chr5:12485938-12485957 None:intergenic 60.0%
CGCCTGGTTGAAGAACTGCG+TGG - Chr5:12485933-12485952 MsG0580024981.01.T01:intron 60.0%
CTCCTGTTTCCGTAGCAGCG+GGG - Chr5:12486345-12486364 MsG0580024981.01.T01:intron 60.0%
GATGGCCAGCTGTTTGGGTG+GGG - Chr5:12485726-12485745 MsG0580024981.01.T01:intron 60.0%
GGAAAGCCCACGACCCAGTT+GGG + Chr5:12484610-12484629 None:intergenic 60.0%
GGATGGCCAGCTGTTTGGGT+GGG - Chr5:12485725-12485744 MsG0580024981.01.T01:intron 60.0%
GTTCTCAGCTAGGACGGGCA+GGG - Chr5:12486462-12486481 MsG0580024981.01.T01:intron 60.0%
TGGATGGCCAGCTGTTTGGG+TGG - Chr5:12485724-12485743 MsG0580024981.01.T01:intron 60.0%
AGCCCCGCTGCTACGGAAAC+AGG + Chr5:12486350-12486369 None:intergenic 65.0%
AGCGGGGCTTGGCCACTCTT+TGG - Chr5:12486361-12486380 MsG0580024981.01.T01:intron 65.0%
CCGCCGCGGTTGTTATCCAC+CGG - Chr5:12484373-12484392 MsG0580024981.01.T01:three_prime_UTR 65.0%
CCGGTGGATAACAACCGCGG+CGG + Chr5:12484376-12484395 None:intergenic 65.0%
CCGTGCTCATCCATCTCCGG+TGG + Chr5:12484392-12484411 None:intergenic 65.0%
CGGAAAGCCCACGACCCAGT+TGG + Chr5:12484611-12484630 None:intergenic 65.0%
GTTTCCGTAGCAGCGGGGCT+TGG - Chr5:12486350-12486369 MsG0580024981.01.T01:intron 65.0%
TAGGCTGGACACCCTGTCCC+CGG + Chr5:12484977-12484996 None:intergenic 65.0%
! GACGGAACCCACGGAGCACT+CGG - Chr5:12484426-12484445 MsG0580024981.01.T01:three_prime_UTR 65.0%
! GAGAGTGGTAGTGACCGGCG+TGG + Chr5:12484536-12484555 None:intergenic 65.0%
! GTGGTAGTGACCGGCGTGGA+CGG + Chr5:12484532-12484551 None:intergenic 65.0%
GTGGCCAAGCCCCGCTGCTA+CGG + Chr5:12486357-12486376 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 12484311 12487077 12484311 ID=MsG0580024981.01;Name=MsG0580024981.01
Chr5 mRNA 12484311 12487077 12484311 ID=MsG0580024981.01.T01;Parent=MsG0580024981.01;Name=MsG0580024981.01.T01;_AED=0.26;_eAED=0.26;_QI=19|1|1|1|1|1|3|338|444
Chr5 exon 12484311 12485139 12484311 ID=MsG0580024981.01.T01:exon:19915;Parent=MsG0580024981.01.T01
Chr5 exon 12485380 12485701 12485380 ID=MsG0580024981.01.T01:exon:19914;Parent=MsG0580024981.01.T01
Chr5 exon 12486537 12487077 12486537 ID=MsG0580024981.01.T01:exon:19913;Parent=MsG0580024981.01.T01
Chr5 five_prime_UTR 12487059 12487077 12487059 ID=MsG0580024981.01.T01:five_prime_utr;Parent=MsG0580024981.01.T01
Chr5 CDS 12486537 12487058 12486537 ID=MsG0580024981.01.T01:cds;Parent=MsG0580024981.01.T01
Chr5 CDS 12485380 12485701 12485380 ID=MsG0580024981.01.T01:cds;Parent=MsG0580024981.01.T01
Chr5 CDS 12484649 12485139 12484649 ID=MsG0580024981.01.T01:cds;Parent=MsG0580024981.01.T01
Chr5 three_prime_UTR 12484311 12484648 12484311 ID=MsG0580024981.01.T01:three_prime_utr;Parent=MsG0580024981.01.T01
Gene Sequence

>MsG0580024981.01.T01

ATGTGGCGATCACAGAGAATATTCCGGAACCTAAAACCAAAAACCGCCGCGGTTGTTATCCACCGGAGATGGATGAGCACGGTGATGAGTTTCGGCGACGGAACCCACGGAGCACTCGGTTTACCAACAACCACCGTTGGTATAGGAACACACGCATACGAACCAACTCCAATTCCTTCTTTACCTTCTGATATTGTTACCGTCCACGCCGGTCACTACCACTCTCTCGCAACCACTTCACAAGGCGATCTTTGGGCTTGGGGTAGAAACAACGAAGCCCAACTGGGTCGTGGGCTTTCCGCTAGAGAAACATGGAATGAGCCAAGAAGAGTGGAGGGGTTAGAAAATGTGAAGGTTTGTGGTGCTTTTGCTTCTGGTGTTGTTTCGTGTTGTGTTGGTGATGATGGCTCTGTTTGGGTTTGGGGGATGTCCAAAAGGGGACAACTTGGACTTGGAAAACATGTTACTGAAGCTGTTCTGCCTTCTAGGGTTGAAGCACTTTCTCCAGAAAACGTAGTTAAGGTCTCGTTTGGTTGGGGGCACGCTCTTGCATTAACTGTGGATGGCCAGCTGTTTGGGTGGGGCTATTATGCAGATGGAAGGATAGGGAATATGGGGAATGATCACTTGGAGTCATCCCCATTAGATTCCAGTTCAAGTGCATTTTCAAACAACACACAAATCACGAGTTCAGACCTCGAAGTTGCTGAAAAGAAAGTCTTACAAGGAATGGCAGAGGAGACTAACATGCCAATAATATGGGAACCTCGCCTGGTTGAAGAACTGCGTGGCGTTCAAGTTGTGGACATTGCATGTGGCCTTGATCACTCTTTAGTTCTTTGCCGTGATGGTGCCCTCTTGAGTTCTGGAAGTAACGTGTATGGCCAATTGGGGCGAGCTAGAGAAGATTTGGGATTTTTTCCTGTTGACATAAAGTTCACTCCTGTTTCCGTAGCAGCGGGGCTTGGCCACTCTTTGGCAATATGCCAGCTTGATGAATCAGATAGTAATGTCACTTTGGGGACTACAGATATTGCTTCATGGGGGTGGAACCAGAGTTCTCAGCTAGGACGGGCAGGGCCTGCCTATCTTCCTGCCTTGATTGATGCGTTGGCTGGGGAAAATCCGGTTTCAGTTTCAGCAGGGCGTGCACATTCGGTTGCTCTCACATCAAAAGGAGAAATGTGGGTCTGGGGATCTGGTAAAAATGGTAGACTTGGATTGTCAAGTTCTGTTGACGAAGATGAGCCGTTTTACCTGGATTCCTTAGAAGGTTTTCAAATTTTGCAGGCGGTGTCTGGGTTTGATCATAATCTGGTTCTTGTTGCTGGCTGA

Protein sequence

>MsG0580024981.01.T01

MWRSQRIFRNLKPKTAAVVIHRRWMSTVMSFGDGTHGALGLPTTTVGIGTHAYEPTPIPSLPSDIVTVHAGHYHSLATTSQGDLWAWGRNNEAQLGRGLSARETWNEPRRVEGLENVKVCGAFASGVVSCCVGDDGSVWVWGMSKRGQLGLGKHVTEAVLPSRVEALSPENVVKVSFGWGHALALTVDGQLFGWGYYADGRIGNMGNDHLESSPLDSSSSAFSNNTQITSSDLEVAEKKVLQGMAEETNMPIIWEPRLVEELRGVQVVDIACGLDHSLVLCRDGALLSSGSNVYGQLGRAREDLGFFPVDIKFTPVSVAAGLGHSLAICQLDESDSNVTLGTTDIASWGWNQSSQLGRAGPAYLPALIDALAGENPVSVSAGRAHSVALTSKGEMWVWGSGKNGRLGLSSSVDEDEPFYLDSLEGFQILQAVSGFDHNLVLVAG*