Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022796.01.T01 | XP_003608509.1 | 99.685 | 317 | 1 | 0 | 1 | 317 | 1 | 317 | 0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022796.01.T01 | O22466 | 88.959 | 317 | 35 | 0 | 1 | 317 | 1 | 317 | 0 | 605 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022796.01.T01 | G7JE05 | 99.685 | 317 | 1 | 0 | 1 | 317 | 1 | 317 | 0.0 | 661 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048298.01 | MsG0480022796.01 | 0.836681 | 8.116353e-57 | 1.030300e-53 |
| MsG0080048855.01 | MsG0480022796.01 | 0.825490 | 4.557321e-54 | 4.159909e-51 |
| MsG0080048996.01 | MsG0480022796.01 | 0.816942 | 4.263817e-52 | 3.063485e-49 |
| MsG0180000142.01 | MsG0480022796.01 | 0.811138 | 8.134230e-51 | 4.995471e-48 |
| MsG0180000155.01 | MsG0480022796.01 | 0.864368 | 1.279036e-64 | 4.005803e-61 |
| MsG0180000314.01 | MsG0480022796.01 | 0.800352 | 1.500364e-48 | 6.971074e-46 |
| MsG0180001102.01 | MsG0480022796.01 | 0.801591 | 8.374928e-49 | 4.014926e-46 |
| MsG0180003656.01 | MsG0480022796.01 | 0.845300 | 4.426906e-59 | 7.344784e-56 |
| MsG0180003696.01 | MsG0480022796.01 | 0.847116 | 1.417522e-59 | 2.493875e-56 |
| MsG0180003786.01 | MsG0480022796.01 | 0.869388 | 3.213746e-66 | 1.204081e-62 |
| MsG0180003920.01 | MsG0480022796.01 | 0.850142 | 2.055381e-60 | 3.987195e-57 |
| MsG0180003943.01 | MsG0480022796.01 | 0.832821 | 7.593495e-56 | 8.584662e-53 |
| MsG0180004099.01 | MsG0480022796.01 | 0.821977 | 3.030069e-53 | 2.502915e-50 |
| MsG0180004711.01 | MsG0480022796.01 | 0.819167 | 1.338691e-52 | 1.022396e-49 |
| MsG0180004975.01 | MsG0480022796.01 | 0.801676 | 8.048682e-49 | 3.866784e-46 |
| MsG0180005575.01 | MsG0480022796.01 | 0.826706 | 2.341801e-54 | 2.213009e-51 |
| MsG0180005845.01 | MsG0480022796.01 | 0.831666 | 1.466355e-55 | 1.602121e-52 |
| MsG0180005919.01 | MsG0480022796.01 | 0.851201 | 1.035150e-60 | 2.079228e-57 |
| MsG0180006000.01 | MsG0480022796.01 | 0.897305 | 1.599180e-76 | 1.795575e-72 |
| MsG0180006070.01 | MsG0480022796.01 | 0.827918 | 1.199766e-54 | 1.174539e-51 |
| MsG0280006311.01 | MsG0480022796.01 | 0.830221 | 3.317304e-55 | 3.473430e-52 |
| MsG0280011014.01 | MsG0480022796.01 | 0.838534 | 2.716515e-57 | 3.649121e-54 |
| MsG0280011282.01 | MsG0480022796.01 | 0.836641 | 8.309121e-57 | 1.053409e-53 |
| MsG0280011340.01 | MsG0480022796.01 | 0.805949 | 1.042594e-49 | 5.588843e-47 |
| MsG0280011388.01 | MsG0480022796.01 | 0.811153 | 8.071378e-51 | 4.958759e-48 |
| MsG0280011416.01 | MsG0480022796.01 | 0.818046 | 2.404092e-52 | 1.780136e-49 |
| MsG0380012471.01 | MsG0480022796.01 | 0.828518 | 8.598145e-55 | 8.566422e-52 |
| MsG0380013178.01 | MsG0480022796.01 | 0.836089 | 1.147666e-56 | 1.431288e-53 |
| MsG0380014289.01 | MsG0480022796.01 | 0.811057 | 8.469788e-51 | 5.190586e-48 |
| MsG0380014647.01 | MsG0480022796.01 | 0.853025 | 3.137373e-61 | 6.684905e-58 |
| MsG0380014703.01 | MsG0480022796.01 | 0.807925 | 3.983978e-50 | 2.247245e-47 |
| MsG0480018894.01 | MsG0480022796.01 | 0.815701 | 8.077803e-52 | 5.609629e-49 |
| MsG0480018919.01 | MsG0480022796.01 | 0.817118 | 3.892988e-52 | 2.810225e-49 |
| MsG0480019710.01 | MsG0480022796.01 | 0.813469 | 2.519227e-51 | 1.646633e-48 |
| MsG0480019922.01 | MsG0480022796.01 | 0.818327 | 2.076884e-52 | 1.549868e-49 |
| MsG0480020402.01 | MsG0480022796.01 | 0.831248 | 1.859045e-55 | 2.005840e-52 |
| MsG0480020495.01 | MsG0480022796.01 | 0.817100 | 3.928562e-52 | 2.834529e-49 |
| MsG0480020699.01 | MsG0480022796.01 | 0.805409 | 1.353786e-49 | 7.156900e-47 |
| MsG0480020847.01 | MsG0480022796.01 | 0.821555 | 3.794577e-53 | 3.097237e-50 |
| MsG0480020909.01 | MsG0480022796.01 | 0.828098 | 1.085787e-54 | 1.068614e-51 |
| MsG0480021322.01 | MsG0480022796.01 | 0.808768 | 2.633349e-50 | 1.518634e-47 |
| MsG0480021491.01 | MsG0480022796.01 | 0.810973 | 8.830323e-51 | 5.399949e-48 |
| MsG0480021984.01 | MsG0480022796.01 | 0.809209 | 2.119097e-50 | 1.236635e-47 |
| MsG0480022164.01 | MsG0480022796.01 | 0.869171 | 3.779998e-66 | 1.404978e-62 |
| MsG0480022313.01 | MsG0480022796.01 | 0.822127 | 2.797258e-53 | 2.320586e-50 |
| MsG0480022549.01 | MsG0480022796.01 | 0.862458 | 4.996031e-64 | 1.464241e-60 |
| MsG0480022755.01 | MsG0480022796.01 | 0.820053 | 8.405928e-53 | 6.581026e-50 |
| MsG0480022796.01 | MsG0480022965.01 | 0.855333 | 6.767667e-62 | 1.557175e-58 |
| MsG0480022796.01 | MsG0480022998.01 | 0.815861 | 7.441907e-52 | 5.190438e-49 |
| MsG0480022796.01 | MsG0480023202.01 | 0.841686 | 4.087150e-58 | 6.051524e-55 |
| MsG0480022796.01 | MsG0480023341.01 | 0.824799 | 6.637006e-54 | 5.940831e-51 |
| MsG0480022796.01 | MsG0480023458.01 | 0.800778 | 1.228568e-48 | 5.769918e-46 |
| MsG0480022796.01 | MsG0480023463.01 | 0.827526 | 1.490064e-54 | 1.442132e-51 |
| MsG0480022796.01 | MsG0480023657.01 | 0.808911 | 2.453589e-50 | 1.420377e-47 |
| MsG0480022796.01 | MsG0480023895.01 | 0.825850 | 3.743676e-54 | 3.452882e-51 |
| MsG0480022796.01 | MsG0580024038.01 | 0.800818 | 1.205598e-48 | 5.667827e-46 |
| MsG0480022796.01 | MsG0580024165.01 | 0.815217 | 1.035448e-51 | 7.095110e-49 |
| MsG0480022796.01 | MsG0580024358.01 | 0.811215 | 7.826887e-51 | 4.816418e-48 |
| MsG0480022796.01 | MsG0580024489.01 | 0.822420 | 2.392291e-53 | 2.001404e-50 |
| MsG0480022796.01 | MsG0580024758.01 | 0.828247 | 9.993542e-55 | 9.877934e-52 |
| MsG0480022796.01 | MsG0580024961.01 | 0.840946 | 6.401361e-58 | 9.262663e-55 |
| MsG0480022796.01 | MsG0580024981.01 | 0.813296 | 2.750439e-51 | 1.789188e-48 |
| MsG0480022796.01 | MsG0580026002.01 | 0.817698 | 2.881865e-52 | 2.113706e-49 |
| MsG0480022796.01 | MsG0580026145.01 | 0.813479 | 2.506884e-51 | 1.638986e-48 |
| MsG0480022796.01 | MsG0580026535.01 | 0.807979 | 3.878498e-50 | 2.190977e-47 |
| MsG0480022796.01 | MsG0580026593.01 | 0.804626 | 1.974021e-49 | 1.022724e-46 |
| MsG0480022796.01 | MsG0580027925.01 | 0.801286 | 9.674688e-49 | 4.602631e-46 |
| MsG0480022796.01 | MsG0580028775.01 | 0.800509 | 1.393828e-48 | 6.501735e-46 |
| MsG0480022796.01 | MsG0580029640.01 | 0.807250 | 5.541016e-50 | 3.071243e-47 |
| MsG0480022796.01 | MsG0580030080.01 | 0.860031 | 2.742771e-63 | 7.393823e-60 |
| MsG0480022796.01 | MsG0680030615.01 | 0.807636 | 4.588410e-50 | 2.568823e-47 |
| MsG0480022796.01 | MsG0680030918.01 | 0.813325 | 2.710790e-51 | 1.764812e-48 |
| MsG0480022796.01 | MsG0680031506.01 | 0.821330 | 4.276819e-53 | 3.469036e-50 |
| MsG0480022796.01 | MsG0680031628.01 | 0.813911 | 2.014012e-51 | 1.332156e-48 |
| MsG0480022796.01 | MsG0680032935.01 | 0.843661 | 1.221666e-58 | 1.924987e-55 |
| MsG0480022796.01 | MsG0680034853.01 | 0.851932 | 6.431827e-61 | 1.322233e-57 |
| MsG0480022796.01 | MsG0680035346.01 | 0.841981 | 3.416083e-58 | 5.105575e-55 |
| MsG0480022796.01 | MsG0680035475.01 | 0.840339 | 9.231128e-58 | 1.310765e-54 |
| MsG0480022796.01 | MsG0680035876.01 | 0.807128 | 5.880000e-50 | 3.248637e-47 |
| MsG0480022796.01 | MsG0780035979.01 | 0.818070 | 2.374012e-52 | 1.759047e-49 |
| MsG0480022796.01 | MsG0780036147.01 | 0.800053 | 1.725808e-48 | 7.957755e-46 |
| MsG0480022796.01 | MsG0780036477.01 | 0.853411 | 2.432417e-61 | 5.251167e-58 |
| MsG0480022796.01 | MsG0780036752.01 | 0.828905 | 6.933125e-55 | 6.984903e-52 |
| MsG0480022796.01 | MsG0780036815.01 | 0.820959 | 5.206302e-53 | 4.179972e-50 |
| MsG0480022796.01 | MsG0780036816.01 | 0.838077 | 3.563191e-57 | 4.719925e-54 |
| MsG0480022796.01 | MsG0780037918.01 | 0.819497 | 1.125878e-52 | 8.678512e-50 |
| MsG0480022796.01 | MsG0780037942.01 | 0.827943 | 1.183140e-54 | 1.159151e-51 |
| MsG0480022796.01 | MsG0780038603.01 | 0.841104 | 5.815707e-58 | 8.456106e-55 |
| MsG0480022796.01 | MsG0780039137.01 | 0.809771 | 1.604396e-50 | 9.504150e-48 |
| MsG0480022796.01 | MsG0780039189.01 | 0.861577 | 9.303403e-64 | 2.644916e-60 |
| MsG0480022796.01 | MsG0780039866.01 | 0.848864 | 4.670504e-60 | 8.690791e-57 |
| MsG0480022796.01 | MsG0780040057.01 | 0.877247 | 7.323038e-69 | 3.656987e-65 |
| MsG0480022796.01 | MsG0780040162.01 | 0.839344 | 1.676463e-57 | 2.308517e-54 |
| MsG0480022796.01 | MsG0780040509.01 | 0.841279 | 5.230947e-58 | 7.647534e-55 |
| MsG0480022796.01 | MsG0780040529.01 | 0.828277 | 9.832102e-55 | 9.726814e-52 |
| MsG0480022796.01 | MsG0780040765.01 | 0.800387 | 1.476246e-48 | 6.864960e-46 |
| MsG0480022796.01 | MsG0780040841.01 | 0.808243 | 3.408816e-50 | 1.939188e-47 |
| MsG0480022796.01 | MsG0780040896.01 | 0.829362 | 5.371271e-55 | 5.485722e-52 |
| MsG0480022796.01 | MsG0780041063.01 | 0.814456 | 1.526751e-51 | 1.024947e-48 |
| MsG0480022796.01 | MsG0780041559.01 | 0.892136 | 2.095361e-74 | 1.890439e-70 |
| MsG0480022796.01 | MsG0780041579.01 | 0.813075 | 3.074903e-51 | 1.988206e-48 |
| MsG0480022796.01 | MsG0780041735.01 | 0.848891 | 4.591427e-60 | 8.550856e-57 |
| MsG0480022796.01 | MsG0780041739.01 | 0.846475 | 2.122088e-59 | 3.657372e-56 |
| MsG0480022796.01 | MsG0880041986.01 | 0.822593 | 2.180050e-53 | 1.832998e-50 |
| MsG0480022796.01 | MsG0880042380.01 | 0.860397 | 2.125755e-63 | 5.802474e-60 |
| MsG0480022796.01 | MsG0880042773.01 | 0.812803 | 3.527357e-51 | 2.264209e-48 |
| MsG0480022796.01 | MsG0880042779.01 | 0.865500 | 5.645222e-65 | 1.840749e-61 |
| MsG0480022796.01 | MsG0880043614.01 | 0.851569 | 8.147647e-61 | 1.656071e-57 |
| MsG0480022796.01 | MsG0880044415.01 | 0.814568 | 1.442171e-51 | 9.710944e-49 |
| MsG0480022796.01 | MsG0880044555.01 | 0.804130 | 2.504470e-49 | 1.281109e-46 |
| MsG0480022796.01 | MsG0880044782.01 | 0.839173 | 1.856020e-57 | 2.542191e-54 |
| MsG0480022796.01 | MsG0880045145.01 | 0.807857 | 4.117902e-50 | 2.318669e-47 |
| MsG0480022796.01 | MsG0880047647.01 | 0.811356 | 7.293377e-51 | 4.504639e-48 |
| MsG0380015350.01 | MsG0480022796.01 | 0.800906 | 1.156690e-48 | 5.450496e-46 |
| MsG0380015677.01 | MsG0480022796.01 | 0.808969 | 2.384537e-50 | 1.382574e-47 |
| MsG0380015831.01 | MsG0480022796.01 | 0.807759 | 4.320486e-50 | 2.426600e-47 |
| MsG0380016140.01 | MsG0480022796.01 | 0.835949 | 1.245351e-56 | 1.546344e-53 |
| MsG0380016240.01 | MsG0480022796.01 | 0.838074 | 3.568513e-57 | 4.726652e-54 |
| MsG0380016517.01 | MsG0480022796.01 | 0.801903 | 7.229933e-49 | 3.493645e-46 |
| MsG0380016703.01 | MsG0480022796.01 | 0.851052 | 1.141023e-60 | 2.280434e-57 |
| MsG0380016920.01 | MsG0480022796.01 | 0.850637 | 1.492711e-60 | 2.943064e-57 |
| MsG0380016970.01 | MsG0480022796.01 | 0.836229 | 1.057563e-56 | 1.324655e-53 |
| MsG0380017061.01 | MsG0480022796.01 | 0.869447 | 3.074991e-66 | 1.154589e-62 |
| MsG0380017372.01 | MsG0480022796.01 | 0.800488 | 1.407888e-48 | 6.563759e-46 |
| MsG0480018163.01 | MsG0480022796.01 | 0.824321 | 8.600093e-54 | 7.591511e-51 |
| MsG0480018206.01 | MsG0480022796.01 | 0.803123 | 4.050911e-49 | 2.019206e-46 |
| MsG0480018289.01 | MsG0480022796.01 | 0.811928 | 5.477940e-51 | 3.434974e-48 |
| MsG0480018397.01 | MsG0480022796.01 | 0.821448 | 4.016206e-53 | 3.268272e-50 |
| MsG0280006712.01 | MsG0480022796.01 | 0.845601 | 3.668055e-59 | 6.144767e-56 |
| MsG0280006720.01 | MsG0480022796.01 | 0.816393 | 5.660932e-52 | 4.006268e-49 |
| MsG0280006803.01 | MsG0480022796.01 | 0.814249 | 1.696166e-51 | 1.132289e-48 |
| MsG0280007222.01 | MsG0480022796.01 | 0.844536 | 7.113877e-59 | 1.152054e-55 |
| MsG0280007452.01 | MsG0480022796.01 | 0.849764 | 2.623123e-60 | 5.025805e-57 |
| MsG0280008037.01 | MsG0480022796.01 | 0.801163 | 1.024901e-48 | 4.860847e-46 |
| MsG0280008457.01 | MsG0480022796.01 | 0.801894 | 7.260145e-49 | 3.507533e-46 |
| MsG0280009739.01 | MsG0480022796.01 | 0.817434 | 3.304161e-52 | 2.406081e-49 |
| MsG0280009783.01 | MsG0480022796.01 | 0.814405 | 1.566591e-51 | 1.050284e-48 |
| MsG0280009794.01 | MsG0480022796.01 | 0.823193 | 1.580178e-53 | 1.351225e-50 |
| MsG0280010015.01 | MsG0480022796.01 | 0.847273 | 1.283535e-59 | 2.269307e-56 |
| MsG0280010176.01 | MsG0480022796.01 | 0.804864 | 1.760204e-49 | 9.176725e-47 |
| MsG0280010287.01 | MsG0480022796.01 | 0.814434 | 1.543656e-51 | 1.035710e-48 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022796.01.T01 | MTR_4g096880 | 99.685 | 317 | 1 | 0 | 1 | 317 | 1 | 317 | 0.0 | 661 |
| MsG0480022796.01.T01 | MTR_4g073080 | 49.832 | 297 | 132 | 5 | 21 | 316 | 17 | 297 | 4.53e-95 | 287 |
| MsG0480022796.01.T01 | MTR_2g039250 | 31.818 | 330 | 183 | 10 | 17 | 317 | 58 | 374 | 1.22e-40 | 148 |
| MsG0480022796.01.T01 | MTR_2g100090 | 28.395 | 324 | 187 | 9 | 17 | 308 | 17 | 327 | 1.11e-28 | 115 |
| MsG0480022796.01.T01 | MTR_8g080700 | 29.817 | 218 | 122 | 6 | 119 | 317 | 156 | 361 | 2.01e-20 | 91.7 |
| MsG0480022796.01.T01 | MTR_2g016160 | 24.378 | 201 | 123 | 4 | 105 | 305 | 54 | 225 | 6.74e-14 | 71.6 |
| MsG0480022796.01.T01 | MTR_5g024090 | 27.273 | 231 | 130 | 9 | 110 | 317 | 141 | 356 | 9.28e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022796.01.T01 | AT5G58230 | 87.382 | 317 | 40 | 0 | 1 | 317 | 1 | 317 | 0.0 | 577 |
| MsG0480022796.01.T01 | AT2G16780 | 48.607 | 323 | 136 | 7 | 2 | 317 | 5 | 304 | 3.06e-101 | 303 |
| MsG0480022796.01.T01 | AT4G35050 | 48.101 | 316 | 146 | 5 | 6 | 317 | 4 | 305 | 5.96e-101 | 303 |
| MsG0480022796.01.T01 | AT2G19520 | 32.344 | 337 | 178 | 11 | 17 | 317 | 64 | 386 | 1.25e-40 | 148 |
| MsG0480022796.01.T01 | AT4G29730 | 28.487 | 337 | 189 | 10 | 13 | 317 | 50 | 366 | 1.42e-35 | 134 |
| MsG0480022796.01.T01 | AT4G29730 | 28.487 | 337 | 189 | 10 | 13 | 317 | 50 | 366 | 1.42e-35 | 134 |
| MsG0480022796.01.T01 | AT4G29730 | 28.487 | 337 | 189 | 10 | 13 | 317 | 50 | 366 | 3.06e-35 | 133 |
| MsG0480022796.01.T01 | AT2G19540 | 32.870 | 216 | 120 | 6 | 119 | 317 | 153 | 360 | 2.68e-23 | 100 |
| MsG0480022796.01.T01 | AT1G29260 | 28.378 | 148 | 97 | 2 | 169 | 316 | 97 | 235 | 7.72e-12 | 65.5 |
Find 77 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGTTTGTGGGATATTAA+TGG | 0.257426 | 4:-76764106 | MsG0480022796.01.T01:CDS |
| CTGTGCGAGCATGAGGTAAT+TGG | 0.260060 | 4:+76764483 | None:intergenic |
| ACATCACATTTGAGAGAGTT+AGG | 0.277178 | 4:-76764748 | MsG0480022796.01.T01:five_prime_UTR |
| CGTCCTGAAGTTGGAGGGTT+TGG | 0.303486 | 4:-76764406 | MsG0480022796.01.T01:CDS |
| GCATCAAGAGACTTATTCTT+AGG | 0.319433 | 4:+76764079 | None:intergenic |
| CCATCAATTGGAGGCTTAGA+AGG | 0.322579 | 4:+76764238 | None:intergenic |
| CTTTCAATCCCTTCAATGAA+TGG | 0.340735 | 4:-76762147 | MsG0480022796.01.T01:CDS |
| CCTTCTAAGCCTCCAATTGA+TGG | 0.346065 | 4:-76764238 | MsG0480022796.01.T01:CDS |
| TTGAGGCATGAGTATTTGTT+TGG | 0.347301 | 4:-76763922 | MsG0480022796.01.T01:CDS |
| TCTATGGAGAATGTTACTTA+TGG | 0.350589 | 4:+76762041 | None:intergenic |
| TGTCCTCTTAACCTCAAATC+AGG | 0.355268 | 4:+76764205 | None:intergenic |
| TCAACGAAGAATACAAAATC+TGG | 0.373066 | 4:-76764663 | MsG0480022796.01.T01:CDS |
| AGTATTTGTTTGGTTCTGTT+GGG | 0.383674 | 4:-76763912 | MsG0480022796.01.T01:CDS |
| GTGAAGAAGTGAGGAAGTAG+TGG | 0.394173 | 4:-76764828 | MsG0480022796.01.T01:five_prime_UTR |
| CAACCAAACCCTCCAACTTC+AGG | 0.396221 | 4:+76764403 | None:intergenic |
| AAACAAGGACATTTGCTTAG+TGG | 0.397496 | 4:-76764145 | MsG0480022796.01.T01:CDS |
| GGACATAATACTGAAGGTTA+TGG | 0.401530 | 4:-76764187 | MsG0480022796.01.T01:CDS |
| CCGGCGGGTTCAGTGCGATC+TGG | 0.403346 | 4:+76764562 | None:intergenic |
| AACCCTGATTTGAGGTTAAG+AGG | 0.408019 | 4:-76764208 | MsG0480022796.01.T01:CDS |
| CTGAAGGTTATGGTTTGTCT+TGG | 0.425247 | 4:-76764177 | MsG0480022796.01.T01:CDS |
| GGGTTACAACTTCCATCAAT+TGG | 0.425575 | 4:+76764226 | None:intergenic |
| GAGTATTTGTTTGGTTCTGT+TGG | 0.442494 | 4:-76763913 | MsG0480022796.01.T01:CDS |
| GGAGGGTTTGGTTGTGCGAA+TGG | 0.452217 | 4:-76764394 | MsG0480022796.01.T01:CDS |
| TTGTGGGATCTGCGCAAGAT+TGG | 0.469154 | 4:-76762088 | MsG0480022796.01.T01:CDS |
| AGGAAGTAGTGGGATAGAGA+AGG | 0.469360 | 4:-76764817 | MsG0480022796.01.T01:five_prime_UTR |
| TGAGCAATGCAAGACTGAAC+AGG | 0.469797 | 4:+76763838 | None:intergenic |
| GGAAGTAGTGGGATAGAGAA+GGG | 0.472455 | 4:-76764816 | MsG0480022796.01.T01:five_prime_UTR |
| GAGGGTTTGGTTGTGCGAAT+GGG | 0.473972 | 4:-76764393 | MsG0480022796.01.T01:CDS |
| TGATGCTCAGATTTGTTTGT+GGG | 0.482057 | 4:-76764116 | MsG0480022796.01.T01:CDS |
| TGTGCGAGCATGAGGTAATT+GGG | 0.482873 | 4:+76764484 | None:intergenic |
| CATCACATTTGAGAGAGTTA+GGG | 0.484531 | 4:-76764747 | MsG0480022796.01.T01:five_prime_UTR |
| CGGACAAAACAGTGAAATTG+TGG | 0.487959 | 4:-76762105 | MsG0480022796.01.T01:CDS |
| GATGACGATCGTCCTGAAGT+TGG | 0.499636 | 4:-76764415 | MsG0480022796.01.T01:CDS |
| AAGATGTGGCTTGGCATTTG+AGG | 0.499952 | 4:-76763939 | MsG0480022796.01.T01:CDS |
| AGCAACTATCCATTCATTGA+AGG | 0.510302 | 4:+76762138 | None:intergenic |
| ATGATGCTCAGATTTGTTTG+TGG | 0.513746 | 4:-76764117 | MsG0480022796.01.T01:CDS |
| AATGAATGGATAGTTGCTAC+TGG | 0.517233 | 4:-76762133 | MsG0480022796.01.T01:CDS |
| ATGATCAGTATTTGCTTGTG+TGG | 0.519295 | 4:-76763888 | MsG0480022796.01.T01:CDS |
| TTACAACTTCCATCAATTGG+AGG | 0.527832 | 4:+76764229 | None:intergenic |
| GATAGTTGCTACTGGTTCTA+CGG | 0.527969 | 4:-76762125 | MsG0480022796.01.T01:CDS |
| AGGGGAAAAGTGAAGAAGTG+AGG | 0.536342 | 4:-76764837 | None:intergenic |
| TGAAGAAGTGAGGAAGTAGT+GGG | 0.539371 | 4:-76764827 | MsG0480022796.01.T01:five_prime_UTR |
| TCATCACTCACGCTCTCGAA+TGG | 0.541702 | 4:-76764609 | MsG0480022796.01.T01:CDS |
| GCAACTATCCATTCATTGAA+GGG | 0.546007 | 4:+76762139 | None:intergenic |
| TGATCAGTATTTGCTTGTGT+GGG | 0.548267 | 4:-76763887 | MsG0480022796.01.T01:CDS |
| GGACAAAACAGTGAAATTGT+GGG | 0.548577 | 4:-76762104 | MsG0480022796.01.T01:CDS |
| GGCCATCTCTCACCGTCGAA+TGG | 0.548676 | 4:-76764588 | MsG0480022796.01.T01:CDS |
| TACTAAGACGGTTAGTGCTG+AGG | 0.555717 | 4:-76764287 | MsG0480022796.01.T01:CDS |
| ATTCAACAGATTAATCATGA+TGG | 0.562715 | 4:-76764358 | MsG0480022796.01.T01:CDS |
| GAAGTAGTGGGATAGAGAAG+GGG | 0.568091 | 4:-76764815 | MsG0480022796.01.T01:five_prime_UTR |
| GACGATCGTCCTGAAGTTGG+AGG | 0.569228 | 4:-76764412 | MsG0480022796.01.T01:CDS |
| GTATTTGTTTGGTTCTGTTG+GGG | 0.571264 | 4:-76763911 | MsG0480022796.01.T01:CDS |
| CAATTACCTCATGCTCGCAC+AGG | 0.571545 | 4:-76764482 | MsG0480022796.01.T01:CDS |
| TTAGGTTCATGAAGGTGTTG+TGG | 0.572025 | 4:-76763962 | MsG0480022796.01.T01:intron |
| GTTGAACCTGTGCGAGCATG+AGG | 0.573425 | 4:+76764476 | None:intergenic |
| GTCCTCTTAACCTCAAATCA+GGG | 0.573483 | 4:+76764206 | None:intergenic |
| GAAGTTGTAACCCTGATTTG+AGG | 0.574752 | 4:-76764216 | MsG0480022796.01.T01:CDS |
| AGCCATTCGACGGTGAGAGA+TGG | 0.578728 | 4:+76764586 | None:intergenic |
| AAGTAGTGGGATAGAGAAGG+GGG | 0.585061 | 4:-76764814 | MsG0480022796.01.T01:five_prime_UTR |
| TTTCGGAAGTGTGGGTCCCG+AGG | 0.597109 | 4:+76764512 | None:intergenic |
| TCTTGGAGTAAGTTTAAACA+AGG | 0.601573 | 4:-76764160 | MsG0480022796.01.T01:CDS |
| CCAGATCGCACTGAACCCGC+CGG | 0.601917 | 4:-76764562 | MsG0480022796.01.T01:CDS |
| GATGACGAGATCGTAGAGGA+AGG | 0.612226 | 4:+76764627 | None:intergenic |
| ATGTTACTTATGGCAATCAA+AGG | 0.614738 | 4:+76762051 | None:intergenic |
| ACAGATTAATCATGATGGTG+AGG | 0.616848 | 4:-76764353 | MsG0480022796.01.T01:CDS |
| ACGATCGTCCTGAAGTTGGA+GGG | 0.619003 | 4:-76764411 | MsG0480022796.01.T01:CDS |
| TGAAGGTGTTGTGGAAGATG+TGG | 0.623313 | 4:-76763953 | MsG0480022796.01.T01:CDS |
| TTAAGAGGACATAATACTGA+AGG | 0.624264 | 4:-76764193 | MsG0480022796.01.T01:CDS |
| GCAATCACAAAACTATTCTG+AGG | 0.629163 | 4:+76764310 | None:intergenic |
| TGAACAGGCTTAGTAACAGA+TGG | 0.631412 | 4:+76763853 | None:intergenic |
| ATGACGAGATCGTAGAGGAA+GGG | 0.633340 | 4:+76764628 | None:intergenic |
| GCGATCTGGAAGCCATTCGA+CGG | 0.637412 | 4:+76764576 | None:intergenic |
| AAAGAAGACGAAGAAATGAG+AGG | 0.647955 | 4:-76764706 | MsG0480022796.01.T01:CDS |
| GTGTTGTGGAAGATGTGGCT+TGG | 0.652239 | 4:-76763948 | MsG0480022796.01.T01:CDS |
| TTGCATTGCTCATTCAAGCG+AGG | 0.660555 | 4:-76763827 | MsG0480022796.01.T01:intron |
| ATGGTGAGGTTAATAGAGCG+AGG | 0.684540 | 4:-76764339 | MsG0480022796.01.T01:CDS |
| GAGTGATGACGAGATCGTAG+AGG | 0.686206 | 4:+76764623 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATAATTGAAAATTAAACA+TGG | - | Chr4:76764350-76764369 | MsG0480022796.01.T01:CDS | 15.0% |
| !!! | TAGTTTTTTATGCTTTTTAT+AGG | + | Chr4:76764071-76764090 | None:intergenic | 15.0% |
| !!! | TTAATCTAGACAATTATTTT+TGG | - | Chr4:76763231-76763250 | MsG0480022796.01.T01:intron | 15.0% |
| !!! | TTTTACATTTGGTTTTTTTA+AGG | - | Chr4:76763129-76763148 | MsG0480022796.01.T01:intron | 15.0% |
| !!! | TTTTATCTATGTTTAAATCT+AGG | - | Chr4:76763083-76763102 | MsG0480022796.01.T01:intron | 15.0% |
| !!! | AAGGAAGTATAATTAGTTTA+GGG | - | Chr4:76763148-76763167 | MsG0480022796.01.T01:intron | 20.0% |
| !!! | ATAATAAGCTCTTTTACATT+TGG | - | Chr4:76763458-76763477 | MsG0480022796.01.T01:intron | 20.0% |
| !!! | CGCTTAATTTATTTTCATAT+TGG | + | Chr4:76763833-76763852 | None:intergenic | 20.0% |
| !!! | TAAGGAAGTATAATTAGTTT+AGG | - | Chr4:76763147-76763166 | MsG0480022796.01.T01:intron | 20.0% |
| !!! | TAATAAGCTCTTTTACATTT+GGG | - | Chr4:76763459-76763478 | MsG0480022796.01.T01:intron | 20.0% |
| !!! | TAATATCACTATGTTTTGAT+GGG | + | Chr4:76764284-76764303 | None:intergenic | 20.0% |
| !!! | TTATAAGCTCTTTTTACATT+TGG | - | Chr4:76763118-76763137 | MsG0480022796.01.T01:intron | 20.0% |
| !!! | TTTTCTTTATATAACGACAT+TGG | - | Chr4:76764687-76764706 | MsG0480022796.01.T01:CDS | 20.0% |
| ! | AAATCTTGAGATTAATGAGT+TGG | - | Chr4:76764098-76764117 | MsG0480022796.01.T01:CDS | 25.0% |
| ! | ACCTATAGTAGAAAAAATAG+TGG | - | Chr4:76763943-76763962 | MsG0480022796.01.T01:CDS | 25.0% |
| ! | AGTATAATTAGTTCATGGTT+TGG | - | Chr4:76763492-76763511 | MsG0480022796.01.T01:intron | 25.0% |
| ! | ATTATCCAAAATAAACTCCT+AGG | + | Chr4:76763443-76763462 | None:intergenic | 25.0% |
| ! | ATTCAACAGATTAATCATGA+TGG | - | Chr4:76762522-76762541 | MsG0480022796.01.T01:intron | 25.0% |
| ! | ATTTGTTTGTGGGATATTAA+TGG | - | Chr4:76762774-76762793 | MsG0480022796.01.T01:intron | 25.0% |
| ! | TGAAAATAAATTAAGCGTGA+CGG | - | Chr4:76763836-76763855 | MsG0480022796.01.T01:CDS | 25.0% |
| ! | TTAATCTAGACAATTGTTTG+TGG | - | Chr4:76763585-76763604 | MsG0480022796.01.T01:intron | 25.0% |
| !! | AAGGAAGTATAATTAGTTCA+TGG | - | Chr4:76763487-76763506 | MsG0480022796.01.T01:intron | 25.0% |
| !! | AGTATAATTAGTTTAGGGTT+TGG | - | Chr4:76763153-76763172 | MsG0480022796.01.T01:intron | 25.0% |
| !! | TAGAAAAAATAGTGGAAACT+AGG | - | Chr4:76763951-76763970 | MsG0480022796.01.T01:CDS | 25.0% |
| !! | TGAGTTGGATAGAAAAATAT+TGG | - | Chr4:76764113-76764132 | MsG0480022796.01.T01:CDS | 25.0% |
| !!! | CTAATATCACTATGTTTTGA+TGG | + | Chr4:76764285-76764304 | None:intergenic | 25.0% |
| !!! | TCCACTATTTTTTCTACTAT+AGG | + | Chr4:76763947-76763966 | None:intergenic | 25.0% |
| AACGAAAACATAAGTCGAAA+AGG | + | Chr4:76762855-76762874 | None:intergenic | 30.0% | |
| ATGTTAAGTGAACAGATACA+GGG | - | Chr4:76763688-76763707 | MsG0480022796.01.T01:intron | 30.0% | |
| ATTTGCATCACATAAAGCAT+CGG | + | Chr4:76763411-76763430 | None:intergenic | 30.0% | |
| TCAACGAAGAATACAAAATC+TGG | - | Chr4:76762217-76762236 | MsG0480022796.01.T01:intron | 30.0% | |
| TCTTGGAGTAAGTTTAAACA+AGG | - | Chr4:76762720-76762739 | MsG0480022796.01.T01:intron | 30.0% | |
| TTAAGAGGACATAATACTGA+AGG | - | Chr4:76762687-76762706 | MsG0480022796.01.T01:intron | 30.0% | |
| TTGAAAATCTGAGTAAAGAC+AGG | + | Chr4:76764497-76764516 | None:intergenic | 30.0% | |
| TTGTGTTGAAAGACTTCATT+CGG | - | Chr4:76764321-76764340 | MsG0480022796.01.T01:CDS | 30.0% | |
| ! | ATTTTGTGGAAATTAGTGTG+AGG | - | Chr4:76763624-76763643 | MsG0480022796.01.T01:intron | 30.0% |
| ! | ATTTTGTTAGGTTAACTGCT+TGG | - | Chr4:76764710-76764729 | MsG0480022796.01.T01:CDS | 30.0% |
| ! | TAACGACATTGGATTTTGTT+AGG | - | Chr4:76764698-76764717 | MsG0480022796.01.T01:CDS | 30.0% |
| ! | TGAAAGTAGCAACTATTTTG+TGG | - | Chr4:76763610-76763629 | MsG0480022796.01.T01:intron | 30.0% |
| ! | TGATGCTCATCAGATTTTTA+AGG | - | Chr4:76762818-76762837 | MsG0480022796.01.T01:intron | 30.0% |
| ! | TTTTGTGATTGCTACTAAGA+CGG | - | Chr4:76762581-76762600 | MsG0480022796.01.T01:intron | 30.0% |
| ! | TTTTGTGGAAATTAGTGTGA+GGG | - | Chr4:76763625-76763644 | MsG0480022796.01.T01:intron | 30.0% |
| !! | AGTATTTGTTTGGTTCTGTT+GGG | - | Chr4:76762968-76762987 | MsG0480022796.01.T01:intron | 30.0% |
| !! | AGTTGATGGGAAAATTTCAT+TGG | - | Chr4:76763794-76763813 | MsG0480022796.01.T01:intron | 30.0% |
| !! | CTTTTACATTTGGGTTTTCA+AGG | - | Chr4:76763468-76763487 | MsG0480022796.01.T01:intron | 30.0% |
| !! | TTGTTTTGTTAGGTTCATGA+AGG | - | Chr4:76762910-76762929 | MsG0480022796.01.T01:intron | 30.0% |
| !!! | AATGTGATGTTGTTTTTTCG+AGG | + | Chr4:76762122-76762141 | None:intergenic | 30.0% |
| !!! | ATGTGATGTTGTTTTTTCGA+GGG | + | Chr4:76762121-76762140 | None:intergenic | 30.0% |
| !!! | TGTGTGGTTTTTGTTTTGTT+AGG | - | Chr4:76762900-76762919 | MsG0480022796.01.T01:intron | 30.0% |
| AAACAAGGACATTTGCTTAG+TGG | - | Chr4:76762735-76762754 | MsG0480022796.01.T01:intron | 35.0% | |
| AAAGAAGACGAAGAAATGAG+AGG | - | Chr4:76762174-76762193 | MsG0480022796.01.T01:intron | 35.0% | |
| AAAGTCGAATTAGAGCACAA+CGG | + | Chr4:76764546-76764565 | None:intergenic | 35.0% | |
| AATGAATGGATAGTTGCTAC+TGG | - | Chr4:76764747-76764766 | MsG0480022796.01.T01:five_prime_UTR | 35.0% | |
| ACATCACATTTGAGAGAGTT+AGG | - | Chr4:76762132-76762151 | MsG0480022796.01.T01:CDS | 35.0% | |
| AGCAACTATCCATTCATTGA+AGG | + | Chr4:76764745-76764764 | None:intergenic | 35.0% | |
| ATAACATGCACCATTCAAAC+TGG | - | Chr4:76763362-76763381 | MsG0480022796.01.T01:intron | 35.0% | |
| ATGATCAGTATTTGCTTGTG+TGG | - | Chr4:76762992-76763011 | MsG0480022796.01.T01:intron | 35.0% | |
| CAACACAATGTTGAACCTTT+CGG | + | Chr4:76764309-76764328 | None:intergenic | 35.0% | |
| CATAGTGATATTAGACCGAA+AGG | - | Chr4:76764291-76764310 | MsG0480022796.01.T01:CDS | 35.0% | |
| CATCACATTTGAGAGAGTTA+GGG | - | Chr4:76762133-76762152 | MsG0480022796.01.T01:CDS | 35.0% | |
| CATCGTCAATATTTGAGAAC+TGG | - | Chr4:76764392-76764411 | MsG0480022796.01.T01:CDS | 35.0% | |
| CATGTTAAGTGAACAGATAC+AGG | - | Chr4:76763687-76763706 | MsG0480022796.01.T01:intron | 35.0% | |
| CGCACTAATTTCCACAAAAT+AGG | + | Chr4:76763271-76763290 | None:intergenic | 35.0% | |
| CGCATCACATAAAATACTTG+AGG | + | Chr4:76763761-76763780 | None:intergenic | 35.0% | |
| CTGTATCTGTTCACTTAACA+TGG | + | Chr4:76763689-76763708 | None:intergenic | 35.0% | |
| CTTTCAATCCCTTCAATGAA+TGG | - | Chr4:76764733-76764752 | MsG0480022796.01.T01:exon | 35.0% | |
| GAATTACTAGAGGTAGAAGA+AGG | - | Chr4:76764045-76764064 | MsG0480022796.01.T01:intron | 35.0% | |
| GCAACTATCCATTCATTGAA+GGG | + | Chr4:76764744-76764763 | None:intergenic | 35.0% | |
| GCAATCACAAAACTATTCTG+AGG | + | Chr4:76762573-76762592 | None:intergenic | 35.0% | |
| GCATCAAGAGACTTATTCTT+AGG | + | Chr4:76762804-76762823 | None:intergenic | 35.0% | |
| GCTTTATGTGATGCAAATGT+AGG | - | Chr4:76763413-76763432 | MsG0480022796.01.T01:intron | 35.0% | |
| GGACAAAACAGTGAAATTGT+GGG | - | Chr4:76764776-76764795 | MsG0480022796.01.T01:five_prime_UTR | 35.0% | |
| GGACATAATACTGAAGGTTA+TGG | - | Chr4:76762693-76762712 | MsG0480022796.01.T01:intron | 35.0% | |
| GTGGCTATATTTCACATATC+TGG | - | Chr4:76764441-76764460 | MsG0480022796.01.T01:CDS | 35.0% | |
| TATGTGATGCAAATGTAGGA+AGG | - | Chr4:76763417-76763436 | MsG0480022796.01.T01:intron | 35.0% | |
| TGAATCTGTCAAAATGAGCA+TGG | - | Chr4:76763300-76763319 | MsG0480022796.01.T01:intron | 35.0% | |
| TGATCAGTATTTGCTTGTGT+GGG | - | Chr4:76762993-76763012 | MsG0480022796.01.T01:intron | 35.0% | |
| TGTAGTACACTAGACAAGAT+AGG | - | Chr4:76763882-76763901 | MsG0480022796.01.T01:CDS | 35.0% | |
| TGTGTTGAAAGACTTCATTC+GGG | - | Chr4:76764322-76764341 | MsG0480022796.01.T01:CDS | 35.0% | |
| TTACAACTTCCATCAATTGG+AGG | + | Chr4:76762654-76762673 | None:intergenic | 35.0% | |
| TTCAAACTGGATGGTTGAAA+TGG | - | Chr4:76763375-76763394 | MsG0480022796.01.T01:intron | 35.0% | |
| TTGAGGCATGAGTATTTGTT+TGG | - | Chr4:76762958-76762977 | MsG0480022796.01.T01:intron | 35.0% | |
| TTTCAACCATCCAGTTTGAA+TGG | + | Chr4:76763375-76763394 | None:intergenic | 35.0% | |
| ! | AAATAGTGGAAACTAGGCTT+AGG | - | Chr4:76763957-76763976 | MsG0480022796.01.T01:CDS | 35.0% |
| ! | ACAGATTAATCATGATGGTG+AGG | - | Chr4:76762527-76762546 | MsG0480022796.01.T01:intron | 35.0% |
| ! | ATGATGCTCAGATTTGTTTG+TGG | - | Chr4:76762763-76762782 | MsG0480022796.01.T01:intron | 35.0% |
| ! | ATTTTGTGGAAATTAGTGCG+AGG | - | Chr4:76763271-76763290 | MsG0480022796.01.T01:intron | 35.0% |
| ! | GAAAGTAGCAACCTATTTTG+TGG | - | Chr4:76763257-76763276 | MsG0480022796.01.T01:intron | 35.0% |
| ! | TGATGCTCAGATTTGTTTGT+GGG | - | Chr4:76762764-76762783 | MsG0480022796.01.T01:intron | 35.0% |
| ! | TTTTGTGGAAATTAGTGCGA+GGG | - | Chr4:76763272-76763291 | MsG0480022796.01.T01:intron | 35.0% |
| !! | AAAGTACTGCTCAAGTTGAT+GGG | - | Chr4:76763781-76763800 | MsG0480022796.01.T01:intron | 35.0% |
| !! | GAGTATTTGTTTGGTTCTGT+TGG | - | Chr4:76762967-76762986 | MsG0480022796.01.T01:intron | 35.0% |
| !! | GTATTTGTTTGGTTCTGTTG+GGG | - | Chr4:76762969-76762988 | MsG0480022796.01.T01:intron | 35.0% |
| !! | TATGTTTTCGTTGTTTTCGC+TGG | - | Chr4:76762863-76762882 | MsG0480022796.01.T01:intron | 35.0% |
| !!! | AGTTCATGGTTTGGTTTTGT+GGG | - | Chr4:76763501-76763520 | MsG0480022796.01.T01:intron | 35.0% |
| !!! | ATCACTATGTTTTGATGGGT+TGG | + | Chr4:76764280-76764299 | None:intergenic | 35.0% |
| !!! | TAGTTCATGGTTTGGTTTTG+TGG | - | Chr4:76763500-76763519 | MsG0480022796.01.T01:intron | 35.0% |
| !!! | TCACTATGTTTTGATGGGTT+GGG | + | Chr4:76764279-76764298 | None:intergenic | 35.0% |
| !!! | TTAGGGTTTTGAAAGTGGAT+GGG | - | Chr4:76762150-76762169 | MsG0480022796.01.T01:CDS | 35.0% |
| AAACTAGGCTTAGGTGGTTT+GGG | - | Chr4:76763966-76763985 | MsG0480022796.01.T01:intron | 40.0% | |
| AAGGACAATAGATCAGATGG+AGG | - | Chr4:76764021-76764040 | MsG0480022796.01.T01:intron | 40.0% | |
| AGATGGAGGAGAATTACTAG+AGG | - | Chr4:76764035-76764054 | MsG0480022796.01.T01:intron | 40.0% | |
| CGGACAAAACAGTGAAATTG+TGG | - | Chr4:76764775-76764794 | MsG0480022796.01.T01:five_prime_UTR | 40.0% | |
| CGTAAGGACAATAGATCAGA+TGG | - | Chr4:76764018-76764037 | MsG0480022796.01.T01:intron | 40.0% | |
| CTGATCTATTGTCCTTACGA+CGG | + | Chr4:76764017-76764036 | None:intergenic | 40.0% | |
| GGGTTACAACTTCCATCAAT+TGG | + | Chr4:76762657-76762676 | None:intergenic | 40.0% | |
| GTCCTCTTAACCTCAAATCA+GGG | + | Chr4:76762677-76762696 | None:intergenic | 40.0% | |
| GTGTTGAAAGACTTCATTCG+GGG | - | Chr4:76764323-76764342 | MsG0480022796.01.T01:CDS | 40.0% | |
| TGAACAGGCTTAGTAACAGA+TGG | + | Chr4:76763030-76763049 | None:intergenic | 40.0% | |
| TGGAAATTAGTGTGAGGGAT+TGG | - | Chr4:76763630-76763649 | MsG0480022796.01.T01:intron | 40.0% | |
| TGGGTGGTTGAAATGGAATA+GGG | - | Chr4:76763735-76763754 | MsG0480022796.01.T01:intron | 40.0% | |
| TGTCAAAATGAGCATGGCAT+GGG | - | Chr4:76763659-76763678 | MsG0480022796.01.T01:intron | 40.0% | |
| TGTCCTCTTAACCTCAAATC+AGG | + | Chr4:76762678-76762697 | None:intergenic | 40.0% | |
| ! | AAATTAAGCGTGACGGAGAT+AGG | - | Chr4:76763843-76763862 | MsG0480022796.01.T01:CDS | 40.0% |
| ! | AACCCTGATTTGAGGTTAAG+AGG | - | Chr4:76762672-76762691 | MsG0480022796.01.T01:intron | 40.0% |
| ! | AATTAAGCGTGACGGAGATA+GGG | - | Chr4:76763844-76763863 | MsG0480022796.01.T01:CDS | 40.0% |
| ! | CTGAAGGTTATGGTTTGTCT+TGG | - | Chr4:76762703-76762722 | MsG0480022796.01.T01:intron | 40.0% |
| ! | GAAGGCCTAGGAGTTTATTT+TGG | - | Chr4:76763435-76763454 | MsG0480022796.01.T01:intron | 40.0% |
| ! | GAAGTTGTAACCCTGATTTG+AGG | - | Chr4:76762664-76762683 | MsG0480022796.01.T01:intron | 40.0% |
| ! | GAGGTAATTGGGTTCGTTTT+CGG | + | Chr4:76762388-76762407 | None:intergenic | 40.0% |
| ! | TTGGACGGAGTAATCTTTTC+CGG | + | Chr4:76762340-76762359 | None:intergenic | 40.0% |
| !! | GAAAGTACTGCTCAAGTTGA+TGG | - | Chr4:76763780-76763799 | MsG0480022796.01.T01:intron | 40.0% |
| !! | GATAGTTGCTACTGGTTCTA+CGG | - | Chr4:76764755-76764774 | MsG0480022796.01.T01:five_prime_UTR | 40.0% |
| !! | TTAGGTTCATGAAGGTGTTG+TGG | - | Chr4:76762918-76762937 | MsG0480022796.01.T01:intron | 40.0% |
| !!! | GAGAGTTAGGGTTTTGAAAG+TGG | - | Chr4:76762145-76762164 | MsG0480022796.01.T01:CDS | 40.0% |
| !!! | GGATTGTTGGTGATTTTGTG+TGG | - | Chr4:76762884-76762903 | MsG0480022796.01.T01:intron | 40.0% |
| !!! | GTTAGGGTTTTGAAAGTGGA+TGG | - | Chr4:76762149-76762168 | MsG0480022796.01.T01:CDS | 40.0% |
| !!! | TAGGGTTTTGAAAGTGGATG+GGG | - | Chr4:76762151-76762170 | MsG0480022796.01.T01:CDS | 40.0% |
| AAACACGCACCATTCAAGCT+GGG | - | Chr4:76763716-76763735 | MsG0480022796.01.T01:intron | 45.0% | |
| ACAACGTTTGAGAGAGAGCT+GGG | - | Chr4:76763915-76763934 | MsG0480022796.01.T01:CDS | 45.0% | |
| ACGTGCTAGGTGGAAAGATA+CGG | - | Chr4:76763333-76763352 | MsG0480022796.01.T01:intron | 45.0% | |
| ATGACGAGATCGTAGAGGAA+GGG | + | Chr4:76762255-76762274 | None:intergenic | 45.0% | |
| ATGCAAATGTAGGAAGGCCT+AGG | - | Chr4:76763423-76763442 | MsG0480022796.01.T01:intron | 45.0% | |
| ATGGTGAGGTTAATAGAGCG+AGG | - | Chr4:76762541-76762560 | MsG0480022796.01.T01:intron | 45.0% | |
| CATGCACCATTCAAACTGGA+TGG | - | Chr4:76763366-76763385 | MsG0480022796.01.T01:intron | 45.0% | |
| CCATCAATTGGAGGCTTAGA+AGG | + | Chr4:76762645-76762664 | None:intergenic | 45.0% | |
| CCTTCTAAGCCTCCAATTGA+TGG | - | Chr4:76762642-76762661 | MsG0480022796.01.T01:intron | 45.0% | |
| CTGGGTGGTTGAAATGGAAT+AGG | - | Chr4:76763734-76763753 | MsG0480022796.01.T01:intron | 45.0% | |
| CTGTCAAAATGAGCATGGCA+TGG | - | Chr4:76763658-76763677 | MsG0480022796.01.T01:intron | 45.0% | |
| GAAACTAGGCTTAGGTGGTT+TGG | - | Chr4:76763965-76763984 | MsG0480022796.01.T01:intron | 45.0% | |
| GACAGGAAATTCTATCAGCG+AGG | + | Chr4:76764480-76764499 | None:intergenic | 45.0% | |
| GTCAAAATGAGCATGGCATG+GGG | - | Chr4:76763660-76763679 | MsG0480022796.01.T01:intron | 45.0% | |
| TAAACACGCACCATTCAAGC+TGG | - | Chr4:76763715-76763734 | MsG0480022796.01.T01:intron | 45.0% | |
| TACTAAGACGGTTAGTGCTG+AGG | - | Chr4:76762593-76762612 | MsG0480022796.01.T01:intron | 45.0% | |
| TAGTGGAAACTAGGCTTAGG+TGG | - | Chr4:76763960-76763979 | MsG0480022796.01.T01:CDS | 45.0% | |
| TCCGTCCAAAAACTCATCCT+CGG | - | Chr4:76762351-76762370 | MsG0480022796.01.T01:intron | 45.0% | |
| TGAAAGACTTCATTCGGGGT+GGG | - | Chr4:76764327-76764346 | MsG0480022796.01.T01:CDS | 45.0% | |
| TGAGCAATGCAAGACTGAAC+AGG | + | Chr4:76763045-76763064 | None:intergenic | 45.0% | |
| TGGAAATTAGTGCGAGGGAT+TGG | - | Chr4:76763277-76763296 | MsG0480022796.01.T01:intron | 45.0% | |
| TGGATGGTTGAAATGGAGCA+GGG | - | Chr4:76763382-76763401 | MsG0480022796.01.T01:intron | 45.0% | |
| TGTCAAAATGAGCATGGCCT+GGG | - | Chr4:76763306-76763325 | MsG0480022796.01.T01:intron | 45.0% | |
| TGTGCGAGCATGAGGTAATT+GGG | + | Chr4:76762399-76762418 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | Chr4:76763728-76763747 | MsG0480022796.01.T01:intron | 45.0% | |
| TTGAAAGACTTCATTCGGGG+TGG | - | Chr4:76764326-76764345 | MsG0480022796.01.T01:CDS | 45.0% | |
| TTGCATTGCTCATTCAAGCG+AGG | - | Chr4:76763053-76763072 | MsG0480022796.01.T01:intron | 45.0% | |
| TTTCAACCACCCAGCTTGAA+TGG | + | Chr4:76763728-76763747 | None:intergenic | 45.0% | |
| ! | AAGATGTGGCTTGGCATTTG+AGG | - | Chr4:76762941-76762960 | MsG0480022796.01.T01:intron | 45.0% |
| ! | AAGTAGTGGGATAGAGAAGG+GGG | - | Chr4:76762066-76762085 | MsG0480022796.01.T01:CDS | 45.0% |
| ! | AGGAAGTAGTGGGATAGAGA+AGG | - | Chr4:76762063-76762082 | MsG0480022796.01.T01:CDS | 45.0% |
| ! | GAAGTAGTGGGATAGAGAAG+GGG | - | Chr4:76762065-76762084 | MsG0480022796.01.T01:CDS | 45.0% |
| ! | GGAAGTAGTGGGATAGAGAA+GGG | - | Chr4:76762064-76762083 | MsG0480022796.01.T01:CDS | 45.0% |
| !! | CGTTGTTTTCGCTGGATTGT+TGG | - | Chr4:76762871-76762890 | MsG0480022796.01.T01:intron | 45.0% |
| !! | GTAATGACGAGCGTCGTTTT+CGG | + | Chr4:76762445-76762464 | None:intergenic | 45.0% |
| !! | TGAAGGTGTTGTGGAAGATG+TGG | - | Chr4:76762927-76762946 | MsG0480022796.01.T01:intron | 45.0% |
| !! | TGCATCACATAAAGCATCGG+AGG | + | Chr4:76763408-76763427 | None:intergenic | 45.0% |
| ACAACTGCAGAGTGGAGTCA+TGG | + | Chr4:76764418-76764437 | None:intergenic | 50.0% | |
| ACGATCGTCCTGAAGTTGGA+GGG | - | Chr4:76762469-76762488 | MsG0480022796.01.T01:intron | 50.0% | |
| CAACCAAACCCTCCAACTTC+AGG | + | Chr4:76762480-76762499 | None:intergenic | 50.0% | |
| CAACGTTTGAGAGAGAGCTG+GGG | - | Chr4:76763916-76763935 | MsG0480022796.01.T01:CDS | 50.0% | |
| CAATTACCTCATGCTCGCAC+AGG | - | Chr4:76762398-76762417 | MsG0480022796.01.T01:intron | 50.0% | |
| CCGTCCAAAAACTCATCCTC+GGG | - | Chr4:76762352-76762371 | MsG0480022796.01.T01:intron | 50.0% | |
| CGGAGATAGGGATGTTGTGT+TGG | - | Chr4:76763856-76763875 | MsG0480022796.01.T01:CDS | 50.0% | |
| CTGGATGGTTGAAATGGAGC+AGG | - | Chr4:76763381-76763400 | MsG0480022796.01.T01:intron | 50.0% | |
| CTGTCAAAATGAGCATGGCC+TGG | - | Chr4:76763305-76763324 | MsG0480022796.01.T01:intron | 50.0% | |
| CTGTGCGAGCATGAGGTAAT+TGG | + | Chr4:76762400-76762419 | None:intergenic | 50.0% | |
| GACAACGTTTGAGAGAGAGC+TGG | - | Chr4:76763914-76763933 | MsG0480022796.01.T01:CDS | 50.0% | |
| GACATGTGCATTCCGTCGTA+AGG | - | Chr4:76764002-76764021 | MsG0480022796.01.T01:intron | 50.0% | |
| GATGACGAGATCGTAGAGGA+AGG | + | Chr4:76762256-76762275 | None:intergenic | 50.0% | |
| GATGACGATCGTCCTGAAGT+TGG | - | Chr4:76762465-76762484 | MsG0480022796.01.T01:intron | 50.0% | |
| GTCAAAATGAGCATGGCCTG+GGG | - | Chr4:76763307-76763326 | MsG0480022796.01.T01:intron | 50.0% | |
| GTGTTGTGGAAGATGTGGCT+TGG | - | Chr4:76762932-76762951 | MsG0480022796.01.T01:intron | 50.0% | |
| TCATCACTCACGCTCTCGAA+TGG | - | Chr4:76762271-76762290 | MsG0480022796.01.T01:intron | 50.0% | |
| TCCACTCTGCAGTTGTACAG+TGG | - | Chr4:76764422-76764441 | MsG0480022796.01.T01:CDS | 50.0% | |
| TTGTGGGATCTGCGCAAGAT+TGG | - | Chr4:76764792-76764811 | MsG0480022796.01.T01:five_prime_UTR | 50.0% | |
| ! | ACGGAGTAATCTTTTCCGGC+GGG | + | Chr4:76762336-76762355 | None:intergenic | 50.0% |
| ! | GACGGAGTAATCTTTTCCGG+CGG | + | Chr4:76762337-76762356 | None:intergenic | 50.0% |
| ! | GAGGGTTTGGTTGTGCGAAT+GGG | - | Chr4:76762487-76762506 | MsG0480022796.01.T01:intron | 50.0% |
| ! | GAGTGATGACGAGATCGTAG+AGG | + | Chr4:76762260-76762279 | None:intergenic | 50.0% |
| ! | TGGGTTCGTTTTCGGAAGTG+TGG | + | Chr4:76762380-76762399 | None:intergenic | 50.0% |
| !! | CCCGAGGATGAGTTTTTGGA+CGG | + | Chr4:76762355-76762374 | None:intergenic | 50.0% |
| !! | GGGTTCGTTTTCGGAAGTGT+GGG | + | Chr4:76762379-76762398 | None:intergenic | 50.0% |
| AGCCATTCGACGGTGAGAGA+TGG | + | Chr4:76762297-76762316 | None:intergenic | 55.0% | |
| CGTCCTGAAGTTGGAGGGTT+TGG | - | Chr4:76762474-76762493 | MsG0480022796.01.T01:intron | 55.0% | |
| GACGATCGTCCTGAAGTTGG+AGG | - | Chr4:76762468-76762487 | MsG0480022796.01.T01:intron | 55.0% | |
| GCCACTGTACAACTGCAGAG+TGG | + | Chr4:76764426-76764445 | None:intergenic | 55.0% | |
| GCGATCTGGAAGCCATTCGA+CGG | + | Chr4:76762307-76762326 | None:intergenic | 55.0% | |
| GTTGAACCTGTGCGAGCATG+AGG | + | Chr4:76762407-76762426 | None:intergenic | 55.0% | |
| ! | CGTTTTCGGAGTCGTCGAGA+GGG | + | Chr4:76762431-76762450 | None:intergenic | 55.0% |
| ! | GGAGGGTTTGGTTGTGCGAA+TGG | - | Chr4:76762486-76762505 | MsG0480022796.01.T01:intron | 55.0% |
| ! | GGGTCCCGAGGATGAGTTTT+TGG | + | Chr4:76762359-76762378 | None:intergenic | 55.0% |
| ! | TCGTTTTCGGAGTCGTCGAG+AGG | + | Chr4:76762432-76762451 | None:intergenic | 55.0% |
| CACGCACCATTCAAGCTGGG+TGG | - | Chr4:76763719-76763738 | MsG0480022796.01.T01:intron | 60.0% | |
| CCACCTAGCACGTTATCCCC+AGG | + | Chr4:76763326-76763345 | None:intergenic | 60.0% | |
| CCTGGGGATAACGTGCTAGG+TGG | - | Chr4:76763323-76763342 | MsG0480022796.01.T01:intron | 60.0% | |
| GGCCATCTCTCACCGTCGAA+TGG | - | Chr4:76762292-76762311 | MsG0480022796.01.T01:intron | 60.0% | |
| TGGCCTGGGGATAACGTGCT+AGG | - | Chr4:76763320-76763339 | MsG0480022796.01.T01:intron | 60.0% | |
| ! | TTTCGGAAGTGTGGGTCCCG+AGG | + | Chr4:76762371-76762390 | None:intergenic | 60.0% |
| CCAGATCGCACTGAACCCGC+CGG | - | Chr4:76762318-76762337 | MsG0480022796.01.T01:intron | 65.0% | |
| ! | CCGGCGGGTTCAGTGCGATC+TGG | + | Chr4:76762321-76762340 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 76762054 | 76764848 | 76762054 | ID=MsG0480022796.01;Name=MsG0480022796.01 |
| Chr4 | mRNA | 76762054 | 76764848 | 76762054 | ID=MsG0480022796.01.T01;Parent=MsG0480022796.01;Name=MsG0480022796.01.T01;_AED=0.38;_eAED=0.38;_QI=114|1|0.66|1|1|1|3|0|317 |
| Chr4 | exon | 76762054 | 76762182 | 76762054 | ID=MsG0480022796.01.T01:exon:10986;Parent=MsG0480022796.01.T01 |
| Chr4 | exon | 76763828 | 76763980 | 76763828 | ID=MsG0480022796.01.T01:exon:10985;Parent=MsG0480022796.01.T01 |
| Chr4 | exon | 76764063 | 76764848 | 76764063 | ID=MsG0480022796.01.T01:exon:10984;Parent=MsG0480022796.01.T01 |
| Chr4 | five_prime_UTR | 76764735 | 76764848 | 76764735 | ID=MsG0480022796.01.T01:five_prime_utr;Parent=MsG0480022796.01.T01 |
| Chr4 | CDS | 76764063 | 76764734 | 76764063 | ID=MsG0480022796.01.T01:cds;Parent=MsG0480022796.01.T01 |
| Chr4 | CDS | 76763828 | 76763980 | 76763828 | ID=MsG0480022796.01.T01:cds;Parent=MsG0480022796.01.T01 |
| Chr4 | CDS | 76762054 | 76762182 | 76762054 | ID=MsG0480022796.01.T01:cds;Parent=MsG0480022796.01.T01 |
| Gene Sequence |
| Protein sequence |
