AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006963.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006963.01.T01 MTR_2g017955 93.947 380 23 0 1 380 1 380 0.0 738
MsG0280006963.01.T01 MTR_2g017925 79.474 380 69 3 1 380 1 371 0.0 605
MsG0280006963.01.T01 MTR_2g017965 77.165 381 82 2 1 380 1 377 0.0 594
MsG0280006963.01.T01 MTR_2g017915 76.053 380 66 3 1 380 1 355 0.0 579
MsG0280006963.01.T01 MTR_2g017875 62.155 362 132 5 1 359 1 360 4.75e-148 423
MsG0280006963.01.T01 MTR_3g023220 58.217 359 143 5 1 359 1 352 1.39e-141 406
MsG0280006963.01.T01 MTR_8g087870 58.333 360 139 7 1 359 1 350 1.78e-137 396
MsG0280006963.01.T01 MTR_2g017925 74.319 257 57 3 124 380 21 268 2.07e-132 380
MsG0280006963.01.T01 MTR_8g087890 47.684 367 177 7 1 359 3 362 1.76e-109 325
MsG0280006963.01.T01 MTR_0565s0010 45.799 369 177 7 3 359 7 364 2.79e-106 317
MsG0280006963.01.T01 MTR_3g024510 45.380 368 188 8 2 359 5 369 2.50e-103 310
MsG0280006963.01.T01 MTR_3g005660 41.509 371 201 7 1 358 1 368 6.70e-90 275
MsG0280006963.01.T01 MTR_2g018015 61.207 232 86 2 1 228 1 232 1.69e-87 267
MsG0280006963.01.T01 MTR_3g005650 43.407 364 182 12 5 359 8 356 2.78e-86 266
MsG0280006963.01.T01 MTR_3g098270 41.399 343 181 10 33 361 34 370 8.12e-78 245
MsG0280006963.01.T01 MTR_2g017895 48.929 280 123 4 81 359 6 266 1.42e-77 240
MsG0280006963.01.T01 MTR_4g035353 36.986 365 214 10 5 359 4 362 1.05e-67 218
MsG0280006963.01.T01 MTR_2g033930 35.150 367 218 11 3 359 6 362 8.17e-61 200
MsG0280006963.01.T01 MTR_7g116570 36.533 323 194 7 25 338 26 346 3.77e-60 199
MsG0280006963.01.T01 MTR_5g078210 38.994 318 179 10 35 342 27 339 2.28e-59 196
MsG0280006963.01.T01 MTR_4g122200 35.326 368 210 13 5 359 15 367 9.01e-57 190
MsG0280006963.01.T01 MTR_2g033920 36.212 359 204 12 1 347 12 357 5.04e-56 188
MsG0280006963.01.T01 MTR_7g116520 31.967 366 230 9 8 362 11 368 9.95e-56 187
MsG0280006963.01.T01 MTR_1g079540 31.765 340 219 8 33 363 31 366 1.96e-53 181
MsG0280006963.01.T01 MTR_8g079050 33.241 361 209 14 1 336 1 354 5.09e-53 180
MsG0280006963.01.T01 MTR_7g116500 33.041 342 209 8 13 338 8 345 7.75e-53 179
MsG0280006963.01.T01 MTR_3g021460 35.000 360 205 11 8 359 11 349 1.41e-52 178
MsG0280006963.01.T01 MTR_2g084585 35.965 342 195 10 7 336 11 340 2.91e-52 177
MsG0280006963.01.T01 MTR_1g079530 32.312 359 228 8 9 362 9 357 7.25e-52 177
MsG0280006963.01.T01 MTR_2g461580 33.880 366 205 12 8 361 11 351 1.61e-51 176
MsG0280006963.01.T01 MTR_4g056280 35.777 341 194 10 10 334 7 338 6.01e-51 174
MsG0280006963.01.T01 MTR_1g024890 30.409 342 221 7 33 363 32 367 4.02e-50 172
MsG0280006963.01.T01 MTR_1g069175 30.295 373 245 8 1 362 1 369 8.57e-50 172
MsG0280006963.01.T01 MTR_4g108690 38.217 314 177 11 35 336 29 337 2.20e-49 171
MsG0280006963.01.T01 MTR_5g009100 31.858 339 215 10 35 362 48 381 1.71e-48 169
MsG0280006963.01.T01 MTR_7g116510 29.947 374 236 10 1 362 1 360 1.91e-48 168
MsG0280006963.01.T01 MTR_1g025720 31.742 356 219 11 3 343 7 353 2.36e-48 167
MsG0280006963.01.T01 MTR_3g435540 36.337 344 196 13 5 336 1 333 2.66e-48 167
MsG0280006963.01.T01 MTR_6g021530 32.456 342 208 8 31 353 26 363 5.89e-48 167
MsG0280006963.01.T01 MTR_1g025700 33.043 345 206 12 3 330 17 353 2.98e-47 165
MsG0280006963.01.T01 MTR_1g025760 32.558 344 210 11 4 331 48 385 5.82e-47 165
MsG0280006963.01.T01 MTR_7g008060 31.861 317 188 7 27 332 27 326 2.78e-46 162
MsG0280006963.01.T01 MTR_3g052580 30.548 383 237 13 1 368 1 369 5.80e-46 162
MsG0280006963.01.T01 MTR_5g022640 34.663 326 184 12 31 337 41 356 5.93e-46 161
MsG0280006963.01.T01 MTR_5g084750 31.609 348 204 12 7 336 9 340 6.81e-46 161
MsG0280006963.01.T01 MTR_3g082830 34.062 320 194 9 29 336 34 348 7.24e-46 161
MsG0280006963.01.T01 MTR_5g093090 31.214 346 209 11 31 358 26 360 1.25e-45 160
MsG0280006963.01.T01 MTR_5g022630 36.901 355 197 17 2 337 11 357 1.90e-45 160
MsG0280006963.01.T01 MTR_4g019880 29.477 363 239 9 10 362 13 368 2.14e-45 160
MsG0280006963.01.T01 MTR_5g084790 34.568 324 187 12 29 336 28 342 2.44e-45 159
MsG0280006963.01.T01 MTR_3g464730 32.286 350 212 11 1 336 1 339 2.71e-45 159
MsG0280006963.01.T01 MTR_4g056160 35.976 328 180 13 25 332 19 336 5.85e-45 158
MsG0280006963.01.T01 MTR_1g025780 32.258 341 209 11 4 329 9 342 2.30e-44 157
MsG0280006963.01.T01 MTR_3g052480 32.162 370 214 14 9 358 14 366 7.04e-44 156
MsG0280006963.01.T01 MTR_3g052580 30.790 367 225 13 7 358 6 358 1.52e-43 156
MsG0280006963.01.T01 MTR_2g033920 37.970 266 149 7 1 262 12 265 3.73e-43 152
MsG0280006963.01.T01 MTR_1g025680 36.050 319 173 13 31 330 32 338 3.16e-42 154
MsG0280006963.01.T01 MTR_5g078210 39.516 248 141 8 35 278 27 269 3.47e-42 150
MsG0280006963.01.T01 MTR_8g014910 34.294 347 202 14 6 336 7 343 6.44e-42 150
MsG0280006963.01.T01 MTR_3g052490 32.329 365 209 16 14 358 18 364 2.85e-41 149
MsG0280006963.01.T01 MTR_3g114120 34.177 316 182 11 31 330 45 350 6.77e-41 148
MsG0280006963.01.T01 MTR_0009s0250 30.864 324 194 10 30 340 30 336 1.12e-40 147
MsG0280006963.01.T01 MTR_8g075230 34.154 325 186 13 31 337 34 348 1.63e-40 147
MsG0280006963.01.T01 MTR_2g100620 32.923 325 188 11 31 336 29 342 1.71e-40 147
MsG0280006963.01.T01 MTR_2g044100 31.967 366 217 13 8 353 19 372 5.74e-40 146
MsG0280006963.01.T01 MTR_8g074560 30.636 346 213 13 4 329 1 339 1.36e-39 144
MsG0280006963.01.T01 MTR_3g114090 32.698 315 187 12 32 330 35 340 2.05e-39 144
MsG0280006963.01.T01 MTR_5g074270 31.173 324 202 10 28 336 28 345 3.21e-39 144
MsG0280006963.01.T01 MTR_8g074570 31.476 359 214 13 10 347 14 361 4.85e-39 143
MsG0280006963.01.T01 MTR_5g084770 29.532 342 218 10 10 336 6 339 2.44e-38 141
MsG0280006963.01.T01 MTR_0127s0040 34.855 241 146 6 126 359 1 237 2.45e-38 137
MsG0280006963.01.T01 MTR_8g022790 32.768 354 213 13 16 359 22 360 1.67e-37 139
MsG0280006963.01.T01 MTR_2g017945 68.478 92 29 0 289 380 88 179 6.09e-37 132
MsG0280006963.01.T01 MTR_8g031420 31.871 342 204 11 34 360 36 363 9.72e-37 137
MsG0280006963.01.T01 MTR_8g031390 32.092 349 202 12 9 336 8 342 1.35e-36 137
MsG0280006963.01.T01 MTR_8g022810 31.765 340 206 12 10 330 14 346 3.63e-36 135
MsG0280006963.01.T01 MTR_8g075200 30.178 338 211 12 8 329 16 344 4.78e-36 136
MsG0280006963.01.T01 MTR_1g025910 32.164 342 200 13 38 357 41 372 4.34e-35 132
MsG0280006963.01.T01 MTR_4g087985 29.305 331 210 10 28 338 31 357 4.96e-35 132
MsG0280006963.01.T01 MTR_8g075220 30.255 314 199 11 32 329 39 348 1.01e-34 131
MsG0280006963.01.T01 MTR_8g031430 32.075 371 214 14 12 360 11 365 1.14e-34 131
MsG0280006963.01.T01 MTR_5g093090 33.740 246 146 7 31 266 26 264 8.15e-34 127
MsG0280006963.01.T01 MTR_5g083040 29.560 318 202 8 29 329 28 340 2.20e-33 127
MsG0280006963.01.T01 MTR_8g031400 29.679 374 219 12 12 360 11 365 3.41e-32 124
MsG0280006963.01.T01 MTR_2g015080 28.571 322 204 10 29 329 34 350 6.98e-32 124
MsG0280006963.01.T01 MTR_8g031390 32.362 309 170 12 9 298 8 296 2.57e-30 118
MsG0280006963.01.T01 MTR_8g022810 34.956 226 135 7 10 229 14 233 2.63e-28 113
MsG0280006963.01.T01 MTR_1g079590 35.260 173 109 3 33 203 31 202 7.66e-27 106
MsG0280006963.01.T01 MTR_8g074580 26.044 407 236 14 9 358 19 417 5.10e-25 105
MsG0280006963.01.T01 MTR_1g030340 26.171 363 224 9 5 332 11 364 1.60e-24 103
MsG0280006963.01.T01 MTR_5g093090 34.759 187 107 6 31 207 26 207 2.77e-23 97.1
MsG0280006963.01.T01 MTR_4g036375 33.526 173 110 4 10 179 7 177 3.44e-23 96.3
MsG0280006963.01.T01 MTR_7g033150 26.525 377 222 11 3 338 5 367 1.02e-22 99.0
MsG0280006963.01.T01 MTR_1g030268 27.108 332 204 11 32 334 39 361 8.47e-22 96.3
MsG0280006963.01.T01 MTR_6g049220 45.872 109 55 3 18 122 15 123 1.24e-21 91.3
MsG0280006963.01.T01 MTR_6g007095 27.164 335 201 12 32 336 40 361 2.05e-21 96.7
MsG0280006963.01.T01 MTR_6g007095 27.517 298 181 12 60 336 394 677 8.03e-18 85.5
MsG0280006963.01.T01 MTR_1g060500 28.037 321 195 11 34 334 41 345 2.48e-21 94.4
MsG0280006963.01.T01 MTR_7g087190 26.027 365 224 12 5 332 13 368 1.19e-20 92.8
MsG0280006963.01.T01 MTR_7g116870 25.000 380 229 15 10 350 9 371 3.18e-20 91.7
MsG0280006963.01.T01 MTR_1g060490 28.076 317 192 13 34 334 38 334 5.35e-20 90.5
MsG0280006963.01.T01 MTR_8g089805 25.275 364 222 12 4 332 16 364 8.70e-20 90.5
MsG0280006963.01.T01 MTR_5g087690 27.019 359 223 13 25 362 40 380 9.70e-20 90.1
MsG0280006963.01.T01 MTR_1g030275 25.967 362 218 11 9 335 15 361 1.14e-19 90.1
MsG0280006963.01.T01 MTR_1g030230 25.967 362 226 10 5 334 4 355 2.04e-19 89.4
MsG0280006963.01.T01 MTR_6g007090 28.319 339 200 15 28 336 34 359 3.31e-19 88.6
MsG0280006963.01.T01 MTR_7g033155 25.316 395 227 13 1 341 4 384 3.71e-19 88.6
MsG0280006963.01.T01 MTR_1g092690 26.498 317 190 15 34 331 52 344 6.31e-19 87.4
MsG0280006963.01.T01 MTR_1g092750 27.217 327 183 13 34 334 41 338 6.36e-19 87.4
MsG0280006963.01.T01 MTR_6g007100 26.543 324 206 12 32 336 32 342 1.26e-18 86.7
MsG0280006963.01.T01 MTR_1g030220 25.967 362 213 13 7 330 15 359 2.59e-18 86.3
MsG0280006963.01.T01 MTR_2g015630 27.824 363 211 16 2 330 4 349 2.69e-18 85.9
MsG0280006963.01.T01 MTR_3g463960 26.140 329 199 13 34 330 45 361 1.55e-17 84.0
MsG0280006963.01.T01 MTR_3g463950 26.140 329 199 13 34 330 45 361 1.55e-17 84.0
MsG0280006963.01.T01 MTR_3g463970 26.140 329 199 13 34 330 45 361 1.55e-17 84.0
MsG0280006963.01.T01 MTR_3g463940 26.140 329 199 13 34 330 45 361 1.55e-17 84.0
MsG0280006963.01.T01 MTR_1g030268 28.452 239 149 8 32 257 39 268 1.88e-17 82.8
MsG0280006963.01.T01 MTR_2g015590 26.027 365 210 13 3 330 7 348 3.82e-17 82.4
MsG0280006963.01.T01 MTR_1g092760 24.923 325 192 14 34 334 40 336 4.26e-17 82.0
MsG0280006963.01.T01 MTR_2g079090 26.989 352 204 18 9 330 4 332 5.45e-17 82.0
MsG0280006963.01.T01 MTR_0029s0050 27.429 350 201 18 11 330 6 332 6.89e-17 81.6
MsG0280006963.01.T01 MTR_1g092740 23.824 319 203 13 34 334 39 335 1.47e-16 80.5
MsG0280006963.01.T01 MTR_7g104220 25.074 339 217 14 13 334 22 340 2.08e-16 80.1
MsG0280006963.01.T01 MTR_2g079080 26.989 352 204 18 9 330 4 332 2.35e-16 80.1
MsG0280006963.01.T01 MTR_0029s0100 27.143 350 202 18 11 330 6 332 2.71e-16 79.7
MsG0280006963.01.T01 MTR_3g463930 26.347 334 201 14 33 330 44 368 5.41e-16 79.3
MsG0280006963.01.T01 MTR_2g015590 28.016 257 158 8 3 249 7 246 5.96e-16 78.6
MsG0280006963.01.T01 MTR_2g015580 25.424 354 220 14 7 330 24 363 1.25e-15 78.2
MsG0280006963.01.T01 MTR_2g087292 38.333 120 69 3 1 116 1 119 2.26e-15 76.3
MsG0280006963.01.T01 MTR_4g104240 24.620 329 198 12 34 330 40 350 2.55e-15 77.0
MsG0280006963.01.T01 MTR_8g028160 22.701 348 213 13 34 341 37 368 5.10e-15 76.3
MsG0280006963.01.T01 MTR_7g033165 24.638 345 213 12 32 341 32 364 7.56e-15 75.9
MsG0280006963.01.T01 MTR_2g017935 42.735 117 42 2 176 292 29 120 1.46e-14 70.1
MsG0280006963.01.T01 MTR_7g033165 25.911 247 155 7 32 260 32 268 9.50e-14 71.6
MsG0280006963.01.T01 MTR_8g012540 25.965 285 184 10 9 277 6 279 1.45e-13 71.6
MsG0280006963.01.T01 MTR_7g113860 24.340 341 209 11 32 336 28 355 1.60e-13 71.6
MsG0280006963.01.T01 MTR_3g069780 25.767 326 201 14 34 330 31 344 4.43e-12 67.4
MsG0280006963.01.T01 MTR_3g438030 24.581 358 224 16 5 330 1 344 6.50e-12 66.6
MsG0280006963.01.T01 MTR_7g113860 22.807 342 213 10 32 336 34 361 1.08e-11 66.2
MsG0280006963.01.T01 MTR_2g015650 24.932 369 212 18 5 330 1 347 8.69e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006963.01.T01 AT1G29670 47.541 366 181 6 1 359 1 362 1.23e-113 336
MsG0280006963.01.T01 AT1G29670 47.541 366 181 6 1 359 69 430 2.28e-112 335
MsG0280006963.01.T01 AT1G29660 46.883 369 180 8 1 359 1 363 2.64e-109 325
MsG0280006963.01.T01 AT5G45670 44.959 367 183 7 4 358 1 360 3.97e-105 314
MsG0280006963.01.T01 AT4G18970 48.094 341 167 5 27 359 22 360 3.09e-104 311
MsG0280006963.01.T01 AT4G18970 48.094 341 167 5 27 359 22 360 5.36e-103 310
MsG0280006963.01.T01 AT1G33811 42.733 344 180 6 28 358 29 368 1.24e-94 288
MsG0280006963.01.T01 AT2G19010 44.231 364 182 8 1 360 2 348 2.43e-94 286
MsG0280006963.01.T01 AT2G19010 44.231 364 182 8 1 360 32 378 1.18e-93 285
MsG0280006963.01.T01 AT2G19050 45.223 314 161 5 30 340 28 333 6.02e-83 257
MsG0280006963.01.T01 AT1G71691 40.413 339 189 7 27 358 49 381 8.29e-82 255
MsG0280006963.01.T01 AT4G30140 43.030 330 175 5 30 358 30 347 5.44e-78 244
MsG0280006963.01.T01 AT5G08460 39.410 373 205 11 1 357 15 382 4.38e-77 243
MsG0280006963.01.T01 AT2G19060 40.055 362 191 8 6 358 4 348 1.00e-74 236
MsG0280006963.01.T01 AT2G19050 48.387 248 120 2 30 277 28 267 2.83e-73 230
MsG0280006963.01.T01 AT5G15720 39.888 356 182 12 26 359 18 363 2.98e-72 230
MsG0280006963.01.T01 AT1G71250 37.940 369 211 11 1 357 8 370 1.23e-70 226
MsG0280006963.01.T01 AT1G71691 43.028 251 139 4 27 277 49 295 3.46e-65 210
MsG0280006963.01.T01 AT3G50400 33.600 375 218 13 8 359 7 373 1.43e-55 187
MsG0280006963.01.T01 AT1G71691 34.965 286 173 7 80 358 1 280 1.75e-55 184
MsG0280006963.01.T01 AT5G15720 42.966 263 135 8 26 277 18 276 1.92e-55 185
MsG0280006963.01.T01 AT4G28780 33.431 341 208 11 1 329 1 334 6.62e-54 182
MsG0280006963.01.T01 AT2G23540 37.003 327 170 13 35 336 50 365 3.46e-52 178
MsG0280006963.01.T01 AT1G74460 37.798 336 178 14 20 336 10 333 5.12e-52 177
MsG0280006963.01.T01 AT5G37690 36.538 312 183 11 35 336 29 335 6.50e-52 177
MsG0280006963.01.T01 AT3G04290 31.653 357 214 8 33 380 29 364 4.76e-51 175
MsG0280006963.01.T01 AT2G04570 35.860 343 199 12 13 342 10 344 3.15e-50 172
MsG0280006963.01.T01 AT5G33370 31.519 349 218 9 28 363 25 365 1.87e-49 171
MsG0280006963.01.T01 AT5G41890 35.866 329 176 11 35 336 33 353 2.96e-48 168
MsG0280006963.01.T01 AT5G03820 33.526 346 212 11 5 336 4 345 3.72e-48 167
MsG0280006963.01.T01 AT4G16230 40.408 245 132 8 13 249 10 248 5.52e-48 163
MsG0280006963.01.T01 AT5G03820 33.526 346 212 11 5 336 32 373 8.00e-48 167
MsG0280006963.01.T01 AT5G22810 35.530 349 197 12 8 336 7 347 1.05e-47 166
MsG0280006963.01.T01 AT5G15720 36.140 285 157 9 92 359 56 332 1.72e-47 164
MsG0280006963.01.T01 AT5G37690 34.615 312 181 12 35 336 29 327 1.33e-46 162
MsG0280006963.01.T01 AT2G42990 33.837 331 200 11 29 346 24 348 1.83e-46 162
MsG0280006963.01.T01 AT1G59406 33.529 340 205 10 1 329 1 330 6.44e-46 161
MsG0280006963.01.T01 AT1G59030 33.529 340 205 10 1 329 1 330 6.44e-46 161
MsG0280006963.01.T01 AT1G58725 33.529 340 205 10 1 329 1 330 6.44e-46 161
MsG0280006963.01.T01 AT5G18430 32.362 343 209 11 3 332 4 336 9.58e-46 160
MsG0280006963.01.T01 AT4G10950 30.588 340 220 10 31 359 69 403 1.95e-45 161
MsG0280006963.01.T01 AT3G53100 34.568 324 197 8 24 336 20 339 1.97e-45 160
MsG0280006963.01.T01 AT1G75880 31.806 371 214 14 3 348 19 375 6.65e-45 159
MsG0280006963.01.T01 AT1G75880 32.609 368 214 14 3 348 19 374 7.29e-45 159
MsG0280006963.01.T01 AT5G63170 31.157 337 206 10 1 329 1 319 2.10e-43 154
MsG0280006963.01.T01 AT4G10950 30.588 340 216 11 31 359 69 399 3.15e-43 155
MsG0280006963.01.T01 AT4G26790 34.688 320 192 10 29 336 25 339 3.21e-43 154
MsG0280006963.01.T01 AT4G26790 34.688 320 192 10 29 336 25 339 3.21e-43 154
MsG0280006963.01.T01 AT3G14820 33.523 352 208 13 8 345 11 350 3.31e-43 154
MsG0280006963.01.T01 AT5G03810 33.232 328 191 11 27 336 24 341 5.15e-43 153
MsG0280006963.01.T01 AT1G75890 32.861 353 213 14 8 343 20 365 1.11e-42 153
MsG0280006963.01.T01 AT1G75890 32.861 353 213 14 8 343 49 394 1.56e-42 153
MsG0280006963.01.T01 AT5G42170 33.974 312 184 10 31 329 48 350 6.09e-42 151
MsG0280006963.01.T01 AT2G03980 30.149 335 209 7 22 341 32 356 1.07e-41 150
MsG0280006963.01.T01 AT2G03980 30.149 335 209 7 22 341 32 356 1.07e-41 150
MsG0280006963.01.T01 AT2G03980 30.149 335 209 7 22 341 32 356 1.07e-41 150
MsG0280006963.01.T01 AT2G03980 30.149 335 209 7 22 341 32 356 1.07e-41 150
MsG0280006963.01.T01 AT1G58520 32.710 321 193 10 18 329 17 323 1.23e-40 147
MsG0280006963.01.T01 AT1G58525 32.710 321 193 10 18 329 17 323 1.23e-40 147
MsG0280006963.01.T01 AT1G75890 31.593 364 216 13 8 343 20 378 1.53e-40 147
MsG0280006963.01.T01 AT5G55050 31.595 326 200 9 23 330 28 348 5.64e-40 146
MsG0280006963.01.T01 AT3G16370 33.438 320 193 12 31 336 28 341 1.69e-39 144
MsG0280006963.01.T01 AT1G20135 31.737 334 200 12 5 329 6 320 2.77e-39 143
MsG0280006963.01.T01 AT3G43570 31.611 329 184 12 8 329 7 301 3.26e-39 142
MsG0280006963.01.T01 AT5G33370 32.734 278 172 6 28 295 25 297 1.41e-38 141
MsG0280006963.01.T01 AT3G43550 33.818 275 166 8 8 277 7 270 2.57e-38 139
MsG0280006963.01.T01 AT1G53920 31.065 338 202 12 26 348 41 362 1.19e-37 140
MsG0280006963.01.T01 AT2G31540 30.685 365 217 15 4 347 1 350 1.63e-37 139
MsG0280006963.01.T01 AT1G73610 31.731 312 189 9 27 329 29 325 8.36e-37 137
MsG0280006963.01.T01 AT1G23500 31.858 339 203 12 3 329 4 326 1.32e-36 136
MsG0280006963.01.T01 AT1G58430 30.769 351 209 17 4 330 1 341 1.33e-36 136
MsG0280006963.01.T01 AT2G30220 31.646 316 191 13 32 330 32 339 1.48e-36 136
MsG0280006963.01.T01 AT1G71120 29.747 316 194 11 29 329 27 329 5.75e-36 135
MsG0280006963.01.T01 AT5G45950 28.440 327 214 11 13 329 21 337 5.05e-35 132
MsG0280006963.01.T01 AT1G20132 33.025 324 189 14 32 337 60 373 5.89e-35 132
MsG0280006963.01.T01 AT2G40250 28.528 326 204 10 31 336 34 350 9.29e-35 131
MsG0280006963.01.T01 AT2G24560 31.124 347 212 15 4 330 1 340 1.14e-34 131
MsG0280006963.01.T01 AT2G30310 30.094 319 192 13 32 330 33 340 1.48e-34 131
MsG0280006963.01.T01 AT1G20130 30.357 336 202 10 31 347 182 504 3.12e-34 132
MsG0280006963.01.T01 AT1G20130 30.357 336 202 10 31 347 202 524 4.98e-34 132
MsG0280006963.01.T01 AT1G75900 30.631 333 205 11 13 329 23 345 1.07e-33 129
MsG0280006963.01.T01 AT1G06990 29.483 329 200 11 29 337 33 349 1.67e-32 125
MsG0280006963.01.T01 AT5G45960 28.875 329 211 10 28 338 42 365 2.07e-32 125
MsG0280006963.01.T01 AT3G14225 30.659 349 217 11 28 359 32 372 3.73e-31 122
MsG0280006963.01.T01 AT5G40990 30.029 343 217 10 33 359 37 372 7.17e-31 121
MsG0280006963.01.T01 AT1G75930 30.473 338 209 13 4 329 1 324 8.55e-31 120
MsG0280006963.01.T01 AT1G20120 30.351 313 195 12 32 329 77 381 1.04e-30 121
MsG0280006963.01.T01 AT3G14225 30.199 351 220 11 28 359 32 376 1.16e-30 120
MsG0280006963.01.T01 AT2G24560 32.056 287 175 12 4 277 1 280 2.42e-30 119
MsG0280006963.01.T01 AT1G75920 30.383 339 208 13 4 329 1 324 1.77e-28 114
MsG0280006963.01.T01 AT1G53940 30.286 350 207 15 33 359 39 374 7.37e-28 113
MsG0280006963.01.T01 AT1G53990 28.232 379 233 14 4 359 1 363 2.03e-27 111
MsG0280006963.01.T01 AT1G75910 30.723 332 204 12 10 329 7 324 4.01e-27 110
MsG0280006963.01.T01 AT2G04020 31.064 235 148 5 11 240 21 246 1.42e-26 107
MsG0280006963.01.T01 AT5G03610 28.455 369 210 17 1 337 1 347 5.49e-26 107
MsG0280006963.01.T01 AT2G04020 27.083 336 198 10 11 341 21 314 1.98e-25 105
MsG0280006963.01.T01 AT1G75920 29.755 326 187 13 32 329 23 334 2.64e-24 102
MsG0280006963.01.T01 AT1G54020 27.635 351 210 15 34 366 34 358 3.25e-24 102
MsG0280006963.01.T01 AT1G53940 32.258 248 145 11 33 269 39 274 1.19e-23 100
MsG0280006963.01.T01 AT1G54010 27.467 375 232 16 11 365 11 365 1.78e-23 100
MsG0280006963.01.T01 AT3G14210 26.882 372 214 14 33 375 36 378 1.23e-22 98.6
MsG0280006963.01.T01 AT1G28610 27.123 365 210 17 1 330 4 347 1.38e-21 95.5
MsG0280006963.01.T01 AT1G31550 28.324 346 184 17 23 330 30 349 1.41e-21 95.5
MsG0280006963.01.T01 AT1G54000 25.781 384 241 17 3 366 7 366 1.60e-21 95.5
MsG0280006963.01.T01 AT5G14450 25.197 381 225 12 1 341 12 372 1.76e-21 95.5
MsG0280006963.01.T01 AT4G16220 46.610 118 57 4 1 116 1 114 2.85e-21 92.4
MsG0280006963.01.T01 AT1G28570 27.248 367 199 15 7 330 10 351 7.54e-21 93.6
MsG0280006963.01.T01 AT1G31550 28.571 350 181 19 23 330 30 352 1.01e-20 93.2
MsG0280006963.01.T01 AT1G28580 27.660 376 188 17 9 330 9 354 5.18e-20 91.3
MsG0280006963.01.T01 AT2G27360 27.855 359 207 15 4 330 13 351 1.12e-19 90.1
MsG0280006963.01.T01 AT3G09930 26.347 334 187 19 34 337 40 344 1.89e-19 89.0
MsG0280006963.01.T01 AT3G09930 26.347 334 187 19 34 337 40 344 1.89e-19 89.0
MsG0280006963.01.T01 AT3G05180 25.731 342 205 11 32 337 35 363 2.04e-19 89.4
MsG0280006963.01.T01 AT1G75920 29.021 286 176 12 57 329 25 296 4.34e-19 87.4
MsG0280006963.01.T01 AT1G54790 24.796 367 228 11 1 332 1 354 5.09e-19 88.2
MsG0280006963.01.T01 AT1G28660 26.431 367 213 18 1 330 5 351 1.93e-18 86.3
MsG0280006963.01.T01 AT3G26430 26.331 338 200 12 32 332 30 355 3.45e-18 85.5
MsG0280006963.01.T01 AT1G75920 27.596 337 189 13 4 329 1 293 7.50e-18 84.0
MsG0280006963.01.T01 AT4G01130 24.722 360 219 14 9 332 14 357 8.71e-18 84.3
MsG0280006963.01.T01 AT3G62280 26.524 328 194 14 32 332 35 342 3.04e-17 82.8
MsG0280006963.01.T01 AT3G27950 24.185 368 231 11 3 338 2 353 3.68e-17 82.4
MsG0280006963.01.T01 AT5G03600 24.847 326 201 16 30 337 46 345 7.81e-16 78.6
MsG0280006963.01.T01 AT5G03600 24.847 326 201 16 30 337 11 310 8.25e-16 78.2
MsG0280006963.01.T01 AT1G67830 25.575 348 209 12 20 332 22 354 7.11e-15 75.9
MsG0280006963.01.T01 AT1G54790 24.513 359 218 12 11 332 11 353 1.15e-14 75.1
MsG0280006963.01.T01 AT3G62280 27.308 260 156 11 32 277 35 275 2.00e-14 73.6
MsG0280006963.01.T01 AT1G54020 25.000 296 182 12 87 366 1 272 2.00e-14 73.6
MsG0280006963.01.T01 AT1G54020 25.000 296 182 12 87 366 1 272 2.00e-14 73.6
MsG0280006963.01.T01 AT1G54020 25.000 296 182 12 87 366 1 272 2.00e-14 73.6
MsG0280006963.01.T01 AT1G28600 31.285 179 97 9 12 173 7 176 5.20e-14 71.2
MsG0280006963.01.T01 AT1G56670 23.889 360 229 12 7 338 12 354 8.06e-14 72.8
MsG0280006963.01.T01 AT3G14210 26.778 239 145 8 158 375 21 250 1.75e-13 70.5
MsG0280006963.01.T01 AT5G45910 28.487 337 186 16 34 330 31 352 2.10e-13 71.2
MsG0280006963.01.T01 AT4G01130 26.891 238 149 9 9 235 14 237 2.60e-13 70.9
MsG0280006963.01.T01 AT3G48460 22.985 335 210 13 34 336 39 357 4.35e-13 70.5
MsG0280006963.01.T01 AT4G16233 34.400 125 71 6 241 357 6 127 4.78e-13 66.2
MsG0280006963.01.T01 AT1G54030 24.138 232 150 7 33 260 52 261 8.59e-13 68.9
MsG0280006963.01.T01 AT1G54020 26.106 226 141 9 157 366 8 223 1.83e-11 63.9
MsG0280006963.01.T01 AT1G54790 22.857 385 218 12 11 332 11 379 2.48e-11 65.1

Find 81 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCATTTGCAAACATTAA+TGG 0.140996 2:-8736690 MsG0280006963.01.T01:CDS
TTTGATGTGATTACATTTAT+AGG 0.141537 2:+8735635 None:intergenic
AATAATTACCATTTGAATTC+TGG 0.175547 2:+8735959 None:intergenic
TTGATTGCAGCTCAGCTTCT+TGG 0.213467 2:-8736729 MsG0280006963.01.T01:intron
CTTAGTGCCTCTAGTTAAAT+AGG 0.214657 2:-8735611 MsG0280006963.01.T01:exon
TGTGGCTTGTTGGATATAAT+TGG 0.215096 2:+8736353 None:intergenic
TAACAGGCTTTACATGAAAT+TGG 0.232077 2:-8736195 MsG0280006963.01.T01:intron
ACTGTTTATAAATATGAATT+TGG 0.232432 2:+8735999 None:intergenic
AGAGTTATCTTTGAATTTAC+AGG 0.246825 2:-8736293 MsG0280006963.01.T01:intron
ATGAAAGGCCATGCCATAAT+AGG 0.255257 2:-8735811 MsG0280006963.01.T01:CDS
GTTACCTGGGTTAGGCCTAT+TGG 0.264459 2:-8736157 MsG0280006963.01.T01:CDS
ACACATACTCTCCCCTATTA+TGG 0.313229 2:+8735798 None:intergenic
TTACCTGGGTTAGGCCTATT+GGG 0.313526 2:-8736156 MsG0280006963.01.T01:CDS
AAATGTAATTACAATCCTTA+TGG 0.317299 2:-8736923 MsG0280006963.01.T01:CDS
AACTATGCATCTGGCGCAGC+TGG 0.367607 2:-8736645 MsG0280006963.01.T01:CDS
ATAGGGGAGAGTATGTGTTT+TGG 0.376746 2:-8735793 MsG0280006963.01.T01:CDS
GGGCTATAAATGTGGCTTGT+TGG 0.378126 2:+8736343 None:intergenic
ACAAGAAACTATGAAGGAAT+TGG 0.384112 2:-8735660 MsG0280006963.01.T01:CDS
TGAAAGGCCATGCCATAATA+GGG 0.385623 2:-8735810 MsG0280006963.01.T01:CDS
TGTTGCAAAACAAGATTGAT+TGG 0.387307 2:-8735848 MsG0280006963.01.T01:CDS
TCGACCGTTGGTAAATCTTC+CGG 0.392186 2:+8736877 None:intergenic
GACTTTCCGATGGGACCAAC+CGG 0.394422 2:-8736896 MsG0280006963.01.T01:CDS
CAATTTATATGAAAGCTATC+TGG 0.395034 2:+8735557 None:intergenic
TTATGGCATGGCCTTTCATC+AGG 0.402123 2:+8735815 None:intergenic
GGAGACTCTTTATCTGATAG+TGG 0.414420 2:-8736974 MsG0280006963.01.T01:CDS
TGAATTCTGGTAATCAGATT+CGG 0.419464 2:+8735972 None:intergenic
GTGGCTTGTTGGATATAATT+GGG 0.419954 2:+8736354 None:intergenic
TGCTTGTATTATGTGCATAT+TGG 0.423781 2:-8736409 MsG0280006963.01.T01:CDS
ACAAGGTTCTTAATATCCAT+TGG 0.441001 2:+8735686 None:intergenic
CACTTGGAGTGCAGCCCAAT+AGG 0.447176 2:+8736142 None:intergenic
TCTCAAATTGTTAGCAGACT+TGG 0.452754 2:-8736466 MsG0280006963.01.T01:CDS
GGAACCTAGTCACTGCAATA+AGG 0.456230 2:-8735745 MsG0280006963.01.T01:CDS
GTCAATTGAAGTTCGACCGT+TGG 0.472588 2:+8736865 None:intergenic
TCTGATTACCAGAATTCAAA+TGG 0.483791 2:-8735967 MsG0280006963.01.T01:intron
CATAATACAAGCATTTGTTA+AGG 0.485419 2:+8736419 None:intergenic
GAGCCATTAATGTTTGCAAA+TGG 0.485984 2:+8736687 None:intergenic
ATCTTTACTCATGTAACAGA+TGG 0.487371 2:-8736117 MsG0280006963.01.T01:CDS
AAATATGTGTTACCTGGGTT+AGG 0.497677 2:-8736165 MsG0280006963.01.T01:CDS
AAAGGCGTGAACTATGCATC+TGG 0.501902 2:-8736654 MsG0280006963.01.T01:CDS
ATCGGAAAGTCGATTCCATA+AGG 0.505437 2:+8736908 None:intergenic
TATTGAGACAAGCATGGCTA+AGG 0.505818 2:-8736616 MsG0280006963.01.T01:intron
GGTTCCAAGCCTCAGTGGTA+TGG 0.506388 2:+8735762 None:intergenic
TTTAGTCTTCACTTATCCAA+TGG 0.506831 2:-8735702 MsG0280006963.01.T01:CDS
TATCTGCAACAATGTGTCAA+TGG 0.507430 2:-8737028 MsG0280006963.01.T01:CDS
ATCTGTTACATGAGTAAAGA+TGG 0.513617 2:+8736119 None:intergenic
TTCCAAGCTTAAATCTCTAG+TGG 0.527818 2:-8736052 MsG0280006963.01.T01:CDS
GCAAGAAAATATGTGTTACC+TGG 0.530877 2:-8736171 MsG0280006963.01.T01:CDS
CCATTAATGTTTGCAAATGG+TGG 0.532987 2:+8736690 None:intergenic
AATCTTCCGGTTGGTCCCAT+CGG 0.551140 2:+8736890 None:intergenic
AATTCCATACCACTGAGGCT+TGG 0.552193 2:-8735766 MsG0280006963.01.T01:CDS
TATTGTAACAGCATATGAGT+AGG 0.556373 2:+8735532 None:intergenic
ATTGTAACAGCATATGAGTA+GGG 0.559495 2:+8735533 None:intergenic
ATCCACTAGAGATTTAAGCT+TGG 0.559515 2:+8736050 None:intergenic
AGAGTTTCTGCATACTGCTG+AGG 0.561066 2:+8736322 None:intergenic
TATGGAATCGACTTTCCGAT+GGG 0.572364 2:-8736905 MsG0280006963.01.T01:CDS
TACTCTCCCCTATTATGGCA+TGG 0.572966 2:+8735803 None:intergenic
AAGACCTTATTGCAGTGACT+AGG 0.573479 2:+8735741 None:intergenic
ATCTATGATCAAGACATGGT+TGG 0.575942 2:-8737080 MsG0280006963.01.T01:CDS
CAAGAAAATATGTGTTACCT+GGG 0.577135 2:-8736170 MsG0280006963.01.T01:CDS
GAGTTTCTGCATACTGCTGA+GGG 0.577747 2:+8736323 None:intergenic
TTATGGAATCGACTTTCCGA+TGG 0.587602 2:-8736906 MsG0280006963.01.T01:CDS
TGTTGAACAAGAAACTATGA+AGG 0.589319 2:-8735666 MsG0280006963.01.T01:CDS
GAGGGTGTATTCCTGATGAA+AGG 0.592786 2:-8735826 MsG0280006963.01.T01:CDS
TCTTTACTCATGTAACAGAT+GGG 0.613164 2:-8736116 MsG0280006963.01.T01:CDS
TGGCTTGTTGGATATAATTG+GGG 0.614511 2:+8736355 None:intergenic
GCAAAACAAGATTGATTGGA+GGG 0.615989 2:-8735844 MsG0280006963.01.T01:CDS
ACATGAGTAAAGATGGCACT+TGG 0.617060 2:+8736126 None:intergenic
TCATAGTTTCTTGTTCAACA+AGG 0.617726 2:+8735669 None:intergenic
ACTTGAACCTATTTAACTAG+AGG 0.628948 2:+8735604 None:intergenic
TGCAAAACAAGATTGATTGG+AGG 0.634424 2:-8735845 MsG0280006963.01.T01:CDS
AATGGCTCTGACATACTCAA+AGG 0.634741 2:-8736672 MsG0280006963.01.T01:CDS
AACAGATGGGTCTTGTGTTG+AGG 0.636336 2:-8736103 MsG0280006963.01.T01:CDS
GAAAGGCCATGCCATAATAG+GGG 0.638032 2:-8735809 MsG0280006963.01.T01:CDS
CCGTTGGTAAATCTTCCGGT+TGG 0.639272 2:+8736881 None:intergenic
ACTGCTGAGGGCTATAAATG+TGG 0.652295 2:+8736335 None:intergenic
AATTCGTATTGAGACAAGCA+TGG 0.663192 2:-8736622 MsG0280006963.01.T01:CDS
GACTAGGTTCCAAGCCTCAG+TGG 0.693512 2:+8735757 None:intergenic
TGGAATCTATGATCAAGACA+TGG 0.694114 2:-8737084 MsG0280006963.01.T01:CDS
CAGCCCAATAGGCCTAACCC+AGG 0.713718 2:+8736153 None:intergenic
GGATGAATTCCATACCACTG+AGG 0.721325 2:-8735771 MsG0280006963.01.T01:CDS
CCAACCGGAAGATTTACCAA+CGG 0.775116 2:-8736881 MsG0280006963.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTGTTTATAAATATGAATT+TGG + Chr2:8736600-8736619 None:intergenic 15.0%
!! AAATAATTTCGTATTGTTAC+AGG - Chr2:8736057-8736076 MsG0280006963.01.T01:CDS 20.0%
!! AAATGTAATTACAATCCTTA+TGG - Chr2:8735673-8735692 MsG0280006963.01.T01:CDS 20.0%
!! AATAATTACCATTTGAATTC+TGG + Chr2:8736640-8736659 None:intergenic 20.0%
!! AATAATTTCGTATTGTTACA+GGG - Chr2:8736058-8736077 MsG0280006963.01.T01:CDS 20.0%
!! CATAATATGGATAAGTTAAA+AGG + Chr2:8735771-8735790 None:intergenic 20.0%
!! TTTGATGTGATTACATTTAT+AGG + Chr2:8736964-8736983 None:intergenic 20.0%
! AGAGTTATCTTTGAATTTAC+AGG - Chr2:8736303-8736322 MsG0280006963.01.T01:CDS 25.0%
! CAATTTATATGAAAGCTATC+TGG + Chr2:8737042-8737061 None:intergenic 25.0%
! GAACAATCAAAGAAATGAAA+AGG + Chr2:8736031-8736050 None:intergenic 25.0%
! TGAGATGAATCAAAAGTTTA+AGG + Chr2:8735832-8735851 None:intergenic 25.0%
! TGGAATTAAAAATGAATGCA+AGG + Chr2:8736529-8736548 None:intergenic 25.0%
! TTTGCTTTCACATTTATTGA+TGG - Chr2:8736352-8736371 MsG0280006963.01.T01:CDS 25.0%
!! ATTGTAATTACATTTTGCAG+AGG + Chr2:8735668-8735687 None:intergenic 25.0%
!! CATAATACAAGCATTTGTTA+AGG + Chr2:8736180-8736199 None:intergenic 25.0%
!!! ATTTTACTGTGTTTGATTTC+AGG - Chr2:8736703-8736722 MsG0280006963.01.T01:CDS 25.0%
!!! TGGTTTATAATAGAAGCATT+TGG - Chr2:8736372-8736391 MsG0280006963.01.T01:CDS 25.0%
AAGCATTTGGTATATGTAAC+AGG - Chr2:8736385-8736404 MsG0280006963.01.T01:CDS 30.0%
ACAAGAAACTATGAAGGAAT+TGG - Chr2:8736936-8736955 MsG0280006963.01.T01:CDS 30.0%
ACAAGGTTCTTAATATCCAT+TGG + Chr2:8736913-8736932 None:intergenic 30.0%
ACACTTCATGGTTCATAATA+TGG + Chr2:8735784-8735803 None:intergenic 30.0%
ACTTGAACCTATTTAACTAG+AGG + Chr2:8736995-8737014 None:intergenic 30.0%
ATCTGTTACATGAGTAAAGA+TGG + Chr2:8736480-8736499 None:intergenic 30.0%
ATCTTTACTCATGTAACAGA+TGG - Chr2:8736479-8736498 MsG0280006963.01.T01:CDS 30.0%
ATTGTAACAGCATATGAGTA+GGG + Chr2:8737066-8737085 None:intergenic 30.0%
CAAGAAAATATGTGTTACCT+GGG - Chr2:8736426-8736445 MsG0280006963.01.T01:CDS 30.0%
GAACAAAGAAAAACACTTCA+TGG + Chr2:8735796-8735815 None:intergenic 30.0%
TAACAGGCTTTACATGAAAT+TGG - Chr2:8736401-8736420 MsG0280006963.01.T01:CDS 30.0%
TATTGTAACAGCATATGAGT+AGG + Chr2:8737067-8737086 None:intergenic 30.0%
TCATAGTTTCTTGTTCAACA+AGG + Chr2:8736930-8736949 None:intergenic 30.0%
TCTCCAAAGATAAAAAGACA+AGG + Chr2:8735607-8735626 None:intergenic 30.0%
TCTGATTACCAGAATTCAAA+TGG - Chr2:8736629-8736648 MsG0280006963.01.T01:CDS 30.0%
TCTTTACTCATGTAACAGAT+GGG - Chr2:8736480-8736499 MsG0280006963.01.T01:CDS 30.0%
TGAATTCTGGTAATCAGATT+CGG + Chr2:8736627-8736646 None:intergenic 30.0%
TGCTTGTATTATGTGCATAT+TGG - Chr2:8736187-8736206 MsG0280006963.01.T01:CDS 30.0%
TGTTGAACAAGAAACTATGA+AGG - Chr2:8736930-8736949 MsG0280006963.01.T01:CDS 30.0%
TGTTGCAAAACAAGATTGAT+TGG - Chr2:8736748-8736767 MsG0280006963.01.T01:intron 30.0%
! TAATTACATTTTGCAGAGGT+AGG + Chr2:8735664-8735683 None:intergenic 30.0%
! TTTAGTCTTCACTTATCCAA+TGG - Chr2:8736894-8736913 MsG0280006963.01.T01:CDS 30.0%
!!! ATCAATCTTGTTTTGCAACA+AGG + Chr2:8736748-8736767 None:intergenic 30.0%
!!! GTGTTTGATTTCAGGTTTTT+TGG - Chr2:8736711-8736730 MsG0280006963.01.T01:CDS 30.0%
AAATATGTGTTACCTGGGTT+AGG - Chr2:8736431-8736450 MsG0280006963.01.T01:CDS 35.0%
AATTCGTATTGAGACAAGCA+TGG - Chr2:8735974-8735993 MsG0280006963.01.T01:CDS 35.0%
AGTGAAACACAAAGTTCAAG+TGG + Chr2:8736332-8736351 None:intergenic 35.0%
ATCCACTAGAGATTTAAGCT+TGG + Chr2:8736549-8736568 None:intergenic 35.0%
ATCTATGATCAAGACATGGT+TGG - Chr2:8735516-8735535 MsG0280006963.01.T01:three_prime_UTR 35.0%
CCACCATTTGCAAACATTAA+TGG - Chr2:8735906-8735925 MsG0280006963.01.T01:intron 35.0%
CCATTAATGTTTGCAAATGG+TGG + Chr2:8735909-8735928 None:intergenic 35.0%
CTTAGTGCCTCTAGTTAAAT+AGG - Chr2:8736985-8737004 MsG0280006963.01.T01:CDS 35.0%
GAGCCATTAATGTTTGCAAA+TGG + Chr2:8735912-8735931 None:intergenic 35.0%
GCAAAACAAGATTGATTGGA+GGG - Chr2:8736752-8736771 MsG0280006963.01.T01:intron 35.0%
GCAAGAAAATATGTGTTACC+TGG - Chr2:8736425-8736444 MsG0280006963.01.T01:CDS 35.0%
TATCTGCAACAATGTGTCAA+TGG - Chr2:8735568-8735587 MsG0280006963.01.T01:three_prime_UTR 35.0%
TCTCAAATTGTTAGCAGACT+TGG - Chr2:8736130-8736149 MsG0280006963.01.T01:CDS 35.0%
TGCAAAACAAGATTGATTGG+AGG - Chr2:8736751-8736770 MsG0280006963.01.T01:intron 35.0%
TGGAATCTATGATCAAGACA+TGG - Chr2:8735512-8735531 MsG0280006963.01.T01:three_prime_UTR 35.0%
TTCCAAGCTTAAATCTCTAG+TGG - Chr2:8736544-8736563 MsG0280006963.01.T01:intron 35.0%
! AGATAAAAAGACAAGGCACT+TGG + Chr2:8735600-8735619 None:intergenic 35.0%
! GATAAAAAGACAAGGCACTT+GGG + Chr2:8735599-8735618 None:intergenic 35.0%
! GTGCCTTGTCTTTTTATCTT+TGG - Chr2:8735601-8735620 MsG0280006963.01.T01:exon 35.0%
!! GTGGCTTGTTGGATATAATT+GGG + Chr2:8736245-8736264 None:intergenic 35.0%
!! TGGCTTGTTGGATATAATTG+GGG + Chr2:8736244-8736263 None:intergenic 35.0%
!! TGTGGCTTGTTGGATATAAT+TGG + Chr2:8736246-8736265 None:intergenic 35.0%
AAGACCTTATTGCAGTGACT+AGG + Chr2:8736858-8736877 None:intergenic 40.0%
ACACATACTCTCCCCTATTA+TGG + Chr2:8736801-8736820 None:intergenic 40.0%
ACATGAGTAAAGATGGCACT+TGG + Chr2:8736473-8736492 None:intergenic 40.0%
ATGAAAGGCCATGCCATAAT+AGG - Chr2:8736785-8736804 MsG0280006963.01.T01:intron 40.0%
GGAGACTCTTTATCTGATAG+TGG - Chr2:8735622-8735641 MsG0280006963.01.T01:CDS 40.0%
TATTGAGACAAGCATGGCTA+AGG - Chr2:8735980-8735999 MsG0280006963.01.T01:CDS 40.0%
TGAAAGGCCATGCCATAATA+GGG - Chr2:8736786-8736805 MsG0280006963.01.T01:intron 40.0%
! ATCGGAAAGTCGATTCCATA+AGG + Chr2:8735691-8735710 None:intergenic 40.0%
! TACATTTTGCAGAGGTAGGA+AGG + Chr2:8735660-8735679 None:intergenic 40.0%
! TATGGAATCGACTTTCCGAT+GGG - Chr2:8735691-8735710 MsG0280006963.01.T01:CDS 40.0%
! TTATGGAATCGACTTTCCGA+TGG - Chr2:8735690-8735709 MsG0280006963.01.T01:CDS 40.0%
!! AATGGCTCTGACATACTCAA+AGG - Chr2:8735924-8735943 MsG0280006963.01.T01:intron 40.0%
!! ATAGGGGAGAGTATGTGTTT+TGG - Chr2:8736803-8736822 MsG0280006963.01.T01:intron 40.0%
!! CAGGGTTTTGTCATCAGTTT+AGG - Chr2:8736076-8736095 MsG0280006963.01.T01:CDS 40.0%
!! TAGGGGAGAGTATGTGTTTT+GGG - Chr2:8736804-8736823 MsG0280006963.01.T01:intron 40.0%
AATTCCATACCACTGAGGCT+TGG - Chr2:8736830-8736849 MsG0280006963.01.T01:intron 45.0%
ACTGCTGAGGGCTATAAATG+TGG + Chr2:8736264-8736283 None:intergenic 45.0%
AGAGTTTCTGCATACTGCTG+AGG + Chr2:8736277-8736296 None:intergenic 45.0%
CCAACCGGAAGATTTACCAA+CGG - Chr2:8735715-8735734 MsG0280006963.01.T01:CDS 45.0%
GAAAGGCCATGCCATAATAG+GGG - Chr2:8736787-8736806 MsG0280006963.01.T01:intron 45.0%
GAGTTTCTGCATACTGCTGA+GGG + Chr2:8736276-8736295 None:intergenic 45.0%
GGAACCTAGTCACTGCAATA+AGG - Chr2:8736851-8736870 MsG0280006963.01.T01:intron 45.0%
GGATGAATTCCATACCACTG+AGG - Chr2:8736825-8736844 MsG0280006963.01.T01:intron 45.0%
GTCAATTGAAGTTCGACCGT+TGG + Chr2:8735734-8735753 None:intergenic 45.0%
TACTCTCCCCTATTATGGCA+TGG + Chr2:8736796-8736815 None:intergenic 45.0%
TTATGGCATGGCCTTTCATC+AGG + Chr2:8736784-8736803 None:intergenic 45.0%
TTGATTGCAGCTCAGCTTCT+TGG - Chr2:8735867-8735886 MsG0280006963.01.T01:CDS 45.0%
! AAAGGCGTGAACTATGCATC+TGG - Chr2:8735942-8735961 MsG0280006963.01.T01:intron 45.0%
! AACAGATGGGTCTTGTGTTG+AGG - Chr2:8736493-8736512 MsG0280006963.01.T01:CDS 45.0%
! GAGGGTGTATTCCTGATGAA+AGG - Chr2:8736770-8736789 MsG0280006963.01.T01:intron 45.0%
! GGGCTATAAATGTGGCTTGT+TGG + Chr2:8736256-8736275 None:intergenic 45.0%
! TCGACCGTTGGTAAATCTTC+CGG + Chr2:8735722-8735741 None:intergenic 45.0%
! TTACCTGGGTTAGGCCTATT+GGG - Chr2:8736440-8736459 MsG0280006963.01.T01:CDS 45.0%
! AATCTTCCGGTTGGTCCCAT+CGG + Chr2:8735709-8735728 None:intergenic 50.0%
! CCGTTGGTAAATCTTCCGGT+TGG + Chr2:8735718-8735737 None:intergenic 50.0%
! GTTACCTGGGTTAGGCCTAT+TGG - Chr2:8736439-8736458 MsG0280006963.01.T01:CDS 50.0%
AACTATGCATCTGGCGCAGC+TGG - Chr2:8735951-8735970 MsG0280006963.01.T01:intron 55.0%
CACTTGGAGTGCAGCCCAAT+AGG + Chr2:8736457-8736476 None:intergenic 55.0%
GACTAGGTTCCAAGCCTCAG+TGG + Chr2:8736842-8736861 None:intergenic 55.0%
GACTTTCCGATGGGACCAAC+CGG - Chr2:8735700-8735719 MsG0280006963.01.T01:CDS 55.0%
GGTTCCAAGCCTCAGTGGTA+TGG + Chr2:8736837-8736856 None:intergenic 55.0%
CAGCCCAATAGGCCTAACCC+AGG + Chr2:8736446-8736465 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 8735511 8737107 8735511 ID=MsG0280006963.01;Name=MsG0280006963.01
Chr2 mRNA 8735511 8737107 8735511 ID=MsG0280006963.01.T01;Parent=MsG0280006963.01;Name=MsG0280006963.01.T01;_AED=0.48;_eAED=0.48;_QI=0|1|0.8|1|1|1|5|105|380
Chr2 exon 8735511 8735893 8735511 ID=MsG0280006963.01.T01:exon:2523;Parent=MsG0280006963.01.T01
Chr2 exon 8735968 8736211 8735968 ID=MsG0280006963.01.T01:exon:2522;Parent=MsG0280006963.01.T01
Chr2 exon 8736294 8736539 8736294 ID=MsG0280006963.01.T01:exon:2521;Parent=MsG0280006963.01.T01
Chr2 exon 8736617 8736741 8736617 ID=MsG0280006963.01.T01:exon:2520;Parent=MsG0280006963.01.T01
Chr2 exon 8736858 8737107 8736858 ID=MsG0280006963.01.T01:exon:2519;Parent=MsG0280006963.01.T01
Chr2 CDS 8736858 8737107 8736858 ID=MsG0280006963.01.T01:cds;Parent=MsG0280006963.01.T01
Chr2 CDS 8736617 8736741 8736617 ID=MsG0280006963.01.T01:cds;Parent=MsG0280006963.01.T01
Chr2 CDS 8736294 8736539 8736294 ID=MsG0280006963.01.T01:cds;Parent=MsG0280006963.01.T01
Chr2 CDS 8735968 8736211 8735968 ID=MsG0280006963.01.T01:cds;Parent=MsG0280006963.01.T01
Chr2 CDS 8735616 8735893 8735616 ID=MsG0280006963.01.T01:cds;Parent=MsG0280006963.01.T01
Chr2 three_prime_UTR 8735511 8735615 8735511 ID=MsG0280006963.01.T01:three_prime_utr;Parent=MsG0280006963.01.T01
Gene Sequence

>MsG0280006963.01.T01

ATGGAATCTATGATCAAGACATGGTTGGTAGTTCTTATTGTTTTCTTGTCTGCAAACTATCTGCAACAATGTGTCAATGGAAAATCCCAAGTGCCTTGTCTTTTTATCTTTGGAGACTCTTTATCTGATAGTGGAAACAACAATAACCTTCCTACCTCTGCAAAATGTAATTACAATCCTTATGGAATCGACTTTCCGATGGGACCAACCGGAAGATTTACCAACGGTCGAACTTCAATTGACATAATAACTCAGCTTCTTGGCTTTGAGAACTTCATTCCACCATTTGCAAACATTAATGGCTCTGACATACTCAAAGGCGTGAACTATGCATCTGGCGCAGCTGGAATTCGTATTGAGACAAGCATGGCTAAGGGTTTTGTCATCAGTTTAGGATTACAGTTAAAAAATCACAAAGTTATAGTTTCTCAAATTGTTAGCAGACTTGGAAGTCTTAACAAAGCTCAAGAATACCTTAACAAATGCTTGTATTATGTGCATATTGGTAGTAATGATTACATAAACAATTATTTTCTTCCCCAATTATATCCAACAAGCCACATTTATAGCCCTCAGCAGTATGCAGAAACTCTAATTGAAGAGTTATCTTTGAATTTACAGGCTTTACATGAAATTGGAGCAAGAAAATATGTGTTACCTGGGTTAGGCCTATTGGGCTGCACTCCAAGTGCCATCTTTACTCATGTAACAGATGGGTCTTGTGTTGAGGAGCAAAATGACCTTGCATTCATTTTTAATTCCAAGCTTAAATCTCTAGTGGATCATTTCAATAATAAGTTCTCTGCTGATTCCAAATTCATATTTATAAACAGTACATCCGAATCTGATTACCAGAATTCAAATGGTTTTTTGGTTGCAAATGCTCCTTGTTGCAAAACAAGATTGATTGGAGGGTGTATTCCTGATGAAAGGCCATGCCATAATAGGGGAGAGTATGTGTTTTGGGATGAATTCCATACCACTGAGGCTTGGAACCTAGTCACTGCAATAAGGTCTTATAATTCATATAATAATTTAGTCTTCACTTATCCAATGGATATTAAGAACCTTGTTGAACAAGAAACTATGAAGGAATTGGAGCCTATAAATGTAATCACATCAAAGCTTAGTGCCTCTAGTTAA

Protein sequence

>MsG0280006963.01.T01

MESMIKTWLVVLIVFLSANYLQQCVNGKSQVPCLFIFGDSLSDSGNNNNLPTSAKCNYNPYGIDFPMGPTGRFTNGRTSIDIITQLLGFENFIPPFANINGSDILKGVNYASGAAGIRIETSMAKGFVISLGLQLKNHKVIVSQIVSRLGSLNKAQEYLNKCLYYVHIGSNDYINNYFLPQLYPTSHIYSPQQYAETLIEELSLNLQALHEIGARKYVLPGLGLLGCTPSAIFTHVTDGSCVEEQNDLAFIFNSKLKSLVDHFNNKFSADSKFIFINSTSESDYQNSNGFLVANAPCCKTRLIGGCIPDERPCHNRGEYVFWDEFHTTEAWNLVTAIRSYNSYNNLVFTYPMDIKNLVEQETMKELEPINVITSKLSASS*