AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011739.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011739.01.T01 MTR_3g010010 91.686 433 6 2 1 404 1 432 0.0 808
MsG0380011739.01.T01 MTR_3g010010 91.686 433 6 2 1 404 43 474 0.0 808
MsG0380011739.01.T01 MTR_2g028050 69.476 439 105 1 1 410 1 439 0.0 614
MsG0380011739.01.T01 MTR_7g022190 60.697 402 128 2 35 407 28 428 0.0 520
MsG0380011739.01.T01 MTR_3g074070 52.972 387 152 2 49 406 59 444 6.53e-148 431
MsG0380011739.01.T01 MTR_3g074070 53.109 386 151 2 50 406 88 472 4.30e-147 429
MsG0380011739.01.T01 MTR_3g074070 52.835 388 152 3 49 406 59 445 9.18e-147 427
MsG0380011739.01.T01 MTR_3g010110 74.913 287 57 5 1 276 1 283 8.74e-142 409
MsG0380011739.01.T01 MTR_3g074070 57.980 307 128 1 100 406 25 330 9.77e-133 387
MsG0380011739.01.T01 MTR_3g074070 56.643 286 123 1 121 406 1 285 1.86e-120 355
MsG0380011739.01.T01 MTR_3g010000 100.000 81 0 0 402 482 70 150 8.39e-53 175
MsG0380011739.01.T01 MTR_4g119620 23.037 191 132 5 223 404 56 240 7.77e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011739.01.T01 AT1G55680 72.248 436 83 3 1 404 1 430 0.0 632
MsG0380011739.01.T01 AT3G13340 74.194 403 75 1 37 410 36 438 0.0 630
MsG0380011739.01.T01 AT3G13340 74.194 403 75 1 37 410 36 438 0.0 630
MsG0380011739.01.T01 AT3G13340 74.194 403 75 1 37 410 36 438 0.0 630
MsG0380011739.01.T01 AT5G56190 66.667 444 110 5 1 411 1 439 0.0 611
MsG0380011739.01.T01 AT5G56190 66.667 444 110 5 1 411 1 439 0.0 611
MsG0380011739.01.T01 AT5G56190 67.436 433 105 4 10 411 6 433 0.0 611
MsG0380011739.01.T01 AT5G56190 66.667 444 110 5 1 411 1 439 0.0 611
MsG0380011739.01.T01 AT5G56190 67.436 433 105 4 10 411 6 433 0.0 611
MsG0380011739.01.T01 AT5G56190 66.667 444 110 5 1 411 1 439 0.0 611
MsG0380011739.01.T01 AT5G56190 67.436 433 105 4 10 411 27 454 0.0 610
MsG0380011739.01.T01 AT1G78070 50.115 433 186 2 8 410 8 440 1.92e-153 444
MsG0380011739.01.T01 AT1G36070 49.750 400 169 2 45 412 11 410 8.87e-146 424
MsG0380011739.01.T01 AT1G36070 49.136 405 174 2 40 412 7 411 1.88e-145 423
MsG0380011739.01.T01 AT1G36070 50.513 390 161 2 55 412 4 393 2.63e-145 422
MsG0380011739.01.T01 AT1G78070 58.497 306 127 0 105 410 26 331 3.11e-137 399
MsG0380011739.01.T01 AT1G78070 58.689 305 126 0 106 410 26 330 3.78e-137 399
MsG0380011739.01.T01 AT1G36070 53.767 292 135 0 121 412 1 292 4.35e-121 356
MsG0380011739.01.T01 AT1G36070 53.767 292 135 0 121 412 1 292 4.35e-121 356
MsG0380011739.01.T01 AT1G55670 93.902 82 5 0 401 482 79 160 1.92e-50 169

Find 129 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGACTATTGCTCCATTATC+TGG 0.125977 3:-4331181 MsG0380011739.01.T01:CDS
TCTGGTTGCTGGAGGATTTC+AGG 0.127364 3:-4332900 MsG0380011739.01.T01:CDS
TCTCAAATTCATGTAAAATT+TGG 0.150895 3:+4335948 None:intergenic
TCTGAAGTACTCAATGTTTC+TGG 0.174983 3:-4333191 MsG0380011739.01.T01:CDS
GCTTATGCAGTTGAGGAATT+TGG 0.208654 3:-4333294 MsG0380011739.01.T01:intron
GAACAAGAAATTGATTTCTT+TGG 0.221456 3:-4330917 MsG0380011739.01.T01:CDS
GTGAAAATATCATGAAATTA+AGG 0.234170 3:-4335971 MsG0380011739.01.T01:five_prime_UTR
TTGATATGATAGGTTCTAAT+TGG 0.246108 3:-4335226 MsG0380011739.01.T01:intron
CCCTGACCTGTCCCCTGAAT+GGG 0.249837 3:+4334748 None:intergenic
GGTTATGATCCAAGTTTCTT+TGG 0.281064 3:-4328448 MsG0380011739.01.T01:CDS
ATGAAAAGGGATTCGGTATC+TGG 0.289000 3:+4330869 None:intergenic
TGCAGTTGAGGAATTTGGTT+TGG 0.296738 3:-4333289 MsG0380011739.01.T01:intron
GATTTCTTTGGTGAGATATC+AGG 0.300013 3:-4330905 MsG0380011739.01.T01:CDS
GAGTCAACCAACATACTTTC+AGG 0.305096 3:+4331329 None:intergenic
AGGACAAAACCTGTCGGATT+TGG 0.308920 3:-4331093 MsG0380011739.01.T01:CDS
CTGGTTGCTGGAGGATTTCA+GGG 0.323770 3:-4332899 MsG0380011739.01.T01:CDS
TTGATAATAATTTATAGATC+TGG 0.324350 3:+4336017 None:intergenic
TTGCTCAGGTAAGCCTTGTT+TGG 0.325198 3:+4328630 None:intergenic
TCCCTGACCTGTCCCCTGAA+TGG 0.330861 3:+4334747 None:intergenic
TATTGTTGCTTACTATATCT+TGG 0.334380 3:-4328485 MsG0380011739.01.T01:CDS
GTTAAAACCAACAGGATCAT+TGG 0.338510 3:+4328543 None:intergenic
TAATCTAAGTGCCCAGATAA+TGG 0.343332 3:+4331169 None:intergenic
TTCTTCCGATGGCAAGTATA+TGG 0.344733 3:-4330999 MsG0380011739.01.T01:CDS
AACCCCTCCAATAGACTTCC+AGG 0.350840 3:+4332965 None:intergenic
TGGAATCAGAAACTTTGATA+TGG 0.354680 3:-4331654 MsG0380011739.01.T01:CDS
TGCAGTAAAAGATAATCTTC+TGG 0.365063 3:-4332918 MsG0380011739.01.T01:CDS
AAAGATAATCTTCTGGTTGC+TGG 0.366888 3:-4332911 MsG0380011739.01.T01:CDS
ATGTTGGTTGACTCTCAAAA+TGG 0.369339 3:-4331320 MsG0380011739.01.T01:CDS
GGACAAAACCTGTCGGATTT+GGG 0.377449 3:-4331092 MsG0380011739.01.T01:CDS
CAAGGCTTACCTGAGCAAAA+TGG 0.416510 3:-4328625 MsG0380011739.01.T01:CDS
TTGAGAAATTATAATTCTAC+AGG 0.417545 3:-4335931 MsG0380011739.01.T01:intron
CAAGTCAGTGGCAGTGTTGA+AGG 0.422513 3:-4331053 MsG0380011739.01.T01:CDS
CCCCATTCAGGGGACAGGTC+AGG 0.425032 3:-4334749 MsG0380011739.01.T01:CDS
CATTCACTGGCCAGGGAAAA+CGG 0.432055 3:+4331606 None:intergenic
GCAGTTGAGGAATTTGGTTT+GGG 0.432688 3:-4333288 MsG0380011739.01.T01:intron
GGTAAGCTACTTCTGATTGT+TGG 0.440890 3:-4331359 MsG0380011739.01.T01:CDS
GAAACATCCTGGAAGTCTAT+TGG 0.441146 3:-4332972 MsG0380011739.01.T01:CDS
CTTCAACACTGCCACTGACT+TGG 0.442971 3:+4331054 None:intergenic
AAGACATCCAGGGGATTCCT+TGG 0.444253 3:-4334844 MsG0380011739.01.T01:CDS
AAGAAGAGGACAAGACATCC+AGG 0.448707 3:-4334855 MsG0380011739.01.T01:CDS
GGGGTTTGGGATCGTACTTA+TGG 0.456853 3:-4330845 MsG0380011739.01.T01:intron
AGCTGACACCAGGTCGATCT+AGG 0.458539 3:+4331876 None:intergenic
GATCCCAAACCCCAATGAAA+AGG 0.464205 3:+4330855 None:intergenic
CGGAAGAATGCCGGATTGAA+CGG 0.464795 3:+4331014 None:intergenic
ATTATTCATTCGCATCATCA+TGG 0.467805 3:-4331150 MsG0380011739.01.T01:CDS
TCAACAAGGTTAAAACCAAC+AGG 0.475786 3:+4328535 None:intergenic
GAGGATGAAATTGATATTGA+TGG 0.475862 3:-4335133 MsG0380011739.01.T01:CDS
GAGAAAGGTATCGGCAAACT+AGG 0.482881 3:-4334802 MsG0380011739.01.T01:CDS
GTAGCAAAGGTTACCCCATC+GGG 0.483017 3:+4331124 None:intergenic
ATCCCAAACCCCAATGAAAA+GGG 0.484751 3:+4330856 None:intergenic
ATCAGAAGTAGCTTACCATC+TGG 0.484849 3:+4331365 None:intergenic
AACCCCAATGAAAAGGGATT+CGG 0.487207 3:+4330862 None:intergenic
AGTTTGCCGATACCTTTCTC+TGG 0.487413 3:+4334805 None:intergenic
GAGACTCACATTCACTGGCC+AGG 0.487504 3:+4331598 None:intergenic
CTTAAATCCAATGATCCTGT+TGG 0.489692 3:-4328550 MsG0380011739.01.T01:CDS
GATGGGGTAACCTTTGCTAC+TGG 0.493849 3:-4331121 MsG0380011739.01.T01:CDS
AAATATCAACCAAAGAAACT+TGG 0.505006 3:+4328439 None:intergenic
GGCTATCCCAAGGAATCCCC+TGG 0.505261 3:+4334837 None:intergenic
CCCATTCAGGGGACAGGTCA+GGG 0.514571 3:-4334748 MsG0380011739.01.T01:CDS
GGTGAATCTATTAATAGAGA+GGG 0.515268 3:-4335112 MsG0380011739.01.T01:CDS
GTGAATCTATTAATAGAGAG+GGG 0.517319 3:-4335111 MsG0380011739.01.T01:CDS
ACCTTTCTCTGGTGATGCTA+AGG 0.517839 3:+4334816 None:intergenic
AGACTATTGCTCCATTATCT+GGG 0.519813 3:-4331180 MsG0380011739.01.T01:CDS
ACAGCATCAAATAATGATTG+TGG 0.525146 3:-4331674 MsG0380011739.01.T01:CDS
AGCTGGTGACAAACGTGCTA+AGG 0.525842 3:-4328587 MsG0380011739.01.T01:CDS
GTCATAAATCTCAATGGCAT+TGG 0.527036 3:+4331817 None:intergenic
TAAGGGTTATTCACCTCTGA+TGG 0.529726 3:+4333158 None:intergenic
CCTGACCTGTCCCCTGAATG+GGG 0.532977 3:+4334749 None:intergenic
TCCAAGAGACTCACATTCAC+TGG 0.540290 3:+4331593 None:intergenic
GTCCTGGTTTCCAGTAGCAA+AGG 0.540720 3:+4331111 None:intergenic
AGACATCCAGGGGATTCCTT+GGG 0.540725 3:-4334843 MsG0380011739.01.T01:CDS
TCGGAGCCATCCGTTCAATC+CGG 0.541521 3:-4331024 MsG0380011739.01.T01:CDS
TCAGGGTGAACTTATTTGCA+AGG 0.543023 3:-4332882 MsG0380011739.01.T01:intron
CCGCATGTCCCAAATCCGAC+AGG 0.548918 3:+4331084 None:intergenic
ACTTGCCATCGGAAGAATGC+CGG 0.550082 3:+4331005 None:intergenic
TCAATCCGGCATTCTTCCGA+TGG 0.550539 3:-4331010 MsG0380011739.01.T01:CDS
GCCTTAGCATCACCAGAGAA+AGG 0.557742 3:-4334817 MsG0380011739.01.T01:CDS
GAGTACTTCAGAACTTGTGC+AGG 0.558524 3:+4333202 None:intergenic
ATCTTGGCTACTTCTAGCAA+TGG 0.561786 3:-4328469 MsG0380011739.01.T01:CDS
AACCTTTGCTACTGGAAACC+AGG 0.567978 3:-4331113 MsG0380011739.01.T01:CDS
TATACATGCACAAAATCTGC+AGG 0.568505 3:+4330965 None:intergenic
AGACTCACATTCACTGGCCA+GGG 0.568609 3:+4331599 None:intergenic
ACATCCTGGAAGTCTATTGG+AGG 0.572776 3:-4332969 MsG0380011739.01.T01:CDS
AGGTGAGTCATAAATCTCAA+TGG 0.572927 3:+4331811 None:intergenic
CACAGTTCTCAGTGACACAC+TGG 0.574143 3:-4333235 MsG0380011739.01.T01:CDS
CATCATCATGGAATCCCGAT+GGG 0.574164 3:-4331138 MsG0380011739.01.T01:CDS
AGTAGCAAAGGTTACCCCAT+CGG 0.575325 3:+4331123 None:intergenic
TTCAGGGGACAGGTCAGGGA+AGG 0.578143 3:-4334744 MsG0380011739.01.T01:intron
GCATCACCAGAGAAAGGTAT+CGG 0.579593 3:-4334811 MsG0380011739.01.T01:CDS
GATAATCTTCTGGTTGCTGG+AGG 0.580685 3:-4332908 MsG0380011739.01.T01:CDS
GCAGTGTTGAAGGGAAATCT+CGG 0.584746 3:-4331043 MsG0380011739.01.T01:CDS
AGAATGCCGGATTGAACGGA+TGG 0.586242 3:+4331018 None:intergenic
AAGTCAGTGGCAGTGTTGAA+GGG 0.588027 3:-4331052 MsG0380011739.01.T01:CDS
AATATTCAGCATCACCACCT+TGG 0.588906 3:+4335185 None:intergenic
CATGTATATGACGTGAAAAG+TGG 0.589414 3:-4330950 MsG0380011739.01.T01:CDS
TCACTGAGAACTGTGACATA+AGG 0.591263 3:+4333243 None:intergenic
TGGTGAATCTATTAATAGAG+AGG 0.592341 3:-4335113 MsG0380011739.01.T01:CDS
CTTGAGCAAAAGCTGACACC+AGG 0.594740 3:+4331866 None:intergenic
CATACTTCTCTCAGTCCAGA+TGG 0.594886 3:-4331380 MsG0380011739.01.T01:CDS
TGGACACGTTGCACCATCAG+AGG 0.597064 3:-4333171 MsG0380011739.01.T01:intron
ACAGCTGCTCAAGCAAGAAG+AGG 0.600613 3:-4334869 MsG0380011739.01.T01:CDS
AGAGAAAATGTAGCCAAACA+AGG 0.605177 3:-4328643 MsG0380011739.01.T01:CDS
CATCCTGGAAGTCTATTGGA+GGG 0.605352 3:-4332968 MsG0380011739.01.T01:CDS
GCATCATCATGGAATCCCGA+TGG 0.607878 3:-4331139 MsG0380011739.01.T01:CDS
GGTTGACTCTCAAAATGGAA+AGG 0.608076 3:-4331315 MsG0380011739.01.T01:intron
GAAAATATGTCTCATCGCCA+AGG 0.610938 3:-4335202 MsG0380011739.01.T01:exon
TTGAGATTTATGACTCACCT+AGG 0.613462 3:-4331808 MsG0380011739.01.T01:intron
TGCGGATGAATATGAAATGG+AGG 0.616643 3:-4335161 MsG0380011739.01.T01:CDS
CTGACCTGTCCCCTGAATGG+GGG 0.619493 3:+4334750 None:intergenic
AGAAGAGGACAAGACATCCA+GGG 0.624570 3:-4334854 MsG0380011739.01.T01:CDS
TGTAGATGAATATGATTACT+CGG 0.633196 3:-4335071 MsG0380011739.01.T01:intron
ATCCTGGAAGTCTATTGGAG+GGG 0.633313 3:-4332967 MsG0380011739.01.T01:CDS
ATATTCATCTACATCAGACT+CGG 0.638509 3:+4335081 None:intergenic
ATATGAAATGGAGGATGTAG+AGG 0.641938 3:-4335152 MsG0380011739.01.T01:CDS
CCTGTCGGATTTGGGACATG+CGG 0.645322 3:-4331084 MsG0380011739.01.T01:CDS
AGACAATCCTGAAAGTATGT+TGG 0.648208 3:-4331336 MsG0380011739.01.T01:CDS
TGAATCTATTAATAGAGAGG+GGG 0.652726 3:-4335110 MsG0380011739.01.T01:CDS
TATAGCCATATACTTGCCAT+CGG 0.653031 3:+4330994 None:intergenic
GGTGTGACACACTTTGAAGC+TGG 0.654419 3:-4328604 MsG0380011739.01.T01:CDS
GCGGAATTTATCCAAGTCAG+TGG 0.655008 3:-4331065 MsG0380011739.01.T01:CDS
GAATCTATTAATAGAGAGGG+GGG 0.659743 3:-4335109 MsG0380011739.01.T01:CDS
CCCAAGCCAAAACATCAACA+AGG 0.663918 3:+4328521 None:intergenic
GAAGAGGACAAGACATCCAG+GGG 0.669643 3:-4334853 MsG0380011739.01.T01:CDS
ATGCAGCACCTAGATCGACC+TGG 0.674184 3:-4331884 MsG0380011739.01.T01:intron
ATGTATATGACGTGAAAAGT+GGG 0.674883 3:-4330949 MsG0380011739.01.T01:CDS
ATCATCATGGAATCCCGATG+GGG 0.681047 3:-4331137 MsG0380011739.01.T01:CDS
GAAACCAGGACAAAACCTGT+CGG 0.683580 3:-4331099 MsG0380011739.01.T01:CDS
GTGATGCTAAGGCTATCCCA+AGG 0.695903 3:+4334827 None:intergenic
AATATGTCTCATCGCCAAGG+TGG 0.738255 3:-4335199 MsG0380011739.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAACTATAAAAAAAC+AGG + Chr3:4332511-4332530 None:intergenic 10.0%
!! ATATAAATAATGTAATCTAT+TGG - Chr3:4334046-4334065 MsG0380011739.01.T01:intron 10.0%
!! CATTAAAAAAAAAAAAAAAG+AGG + Chr3:4331192-4331211 None:intergenic 10.0%
!!! ATATTTTTAATAATGGATAT+TGG - Chr3:4332751-4332770 MsG0380011739.01.T01:intron 10.0%
!!! TCATTTTATACTTATATATT+TGG + Chr3:4335095-4335114 None:intergenic 10.0%
!! AATATCATCAAATATTATCA+TGG + Chr3:4334536-4334555 None:intergenic 15.0%
!! ATAAATAAGATTTATGTTCT+GGG - Chr3:4332198-4332217 MsG0380011739.01.T01:intron 15.0%
!! ATTAATTGTTGATATGAATT+TGG + Chr3:4335338-4335357 None:intergenic 15.0%
!! CAAAATAATAAATTCATGAT+TGG + Chr3:4328988-4329007 None:intergenic 15.0%
!! CAAACCAAAAAAAAAAAATA+TGG - Chr3:4335576-4335595 MsG0380011739.01.T01:intron 15.0%
!! TAACTATGGTTTATTTATAT+CGG + Chr3:4329863-4329882 None:intergenic 15.0%
!! TATAAATAAGATTTATGTTC+TGG - Chr3:4332197-4332216 MsG0380011739.01.T01:intron 15.0%
!! TATAAGTATAAAATGACATT+TGG - Chr3:4335099-4335118 MsG0380011739.01.T01:CDS 15.0%
!! TATCAAAATAATTAAAGAGA+AGG + Chr3:4332734-4332753 None:intergenic 15.0%
!! TATTATTATCTATATCAAAC+AGG - Chr3:4330692-4330711 MsG0380011739.01.T01:intron 15.0%
!! TGATATAGATAATAATAAAC+AGG + Chr3:4330689-4330708 None:intergenic 15.0%
!! TTGATAAAAATTGAAAATTG+TGG - Chr3:4334356-4334375 MsG0380011739.01.T01:intron 15.0%
!!! ATATTTTGTTGATAAGTTTA+TGG + Chr3:4334484-4334503 None:intergenic 15.0%
!!! CAATCATGAATTTATTATTT+TGG - Chr3:4328986-4329005 MsG0380011739.01.T01:intron 15.0%
!!! TATAATTGTAGTAACAATTT+TGG - Chr3:4334323-4334342 MsG0380011739.01.T01:intron 15.0%
!!! TTCCATATTTTATTTTCAAA+GGG - Chr3:4328914-4328933 MsG0380011739.01.T01:intron 15.0%
!!! TTGATAATAATTTATAGATC+TGG + Chr3:4328491-4328510 None:intergenic 15.0%
!!! TTTCCATATTTTATTTTCAA+AGG - Chr3:4328913-4328932 MsG0380011739.01.T01:intron 15.0%
!!! TTTTTTTTAATGTATGTCTT+GGG + Chr3:4334180-4334199 None:intergenic 15.0%
!!! TTTTTTTTTAATGTATGTCT+TGG + Chr3:4334181-4334200 None:intergenic 15.0%
!! AAAACATAAAACAAATCCTA+TGG + Chr3:4332556-4332575 None:intergenic 20.0%
!! AAACATAAAACAAATCCTAT+GGG + Chr3:4332555-4332574 None:intergenic 20.0%
!! AGAATATAAATAGAAAGCAA+AGG + Chr3:4333077-4333096 None:intergenic 20.0%
!! ATAACTACAATATTACTCAT+AGG + Chr3:4329587-4329606 None:intergenic 20.0%
!! ATACAAAGAAATTTAAGTAG+TGG + Chr3:4334973-4334992 None:intergenic 20.0%
!! CTAAAATTGTTCATTTAAGA+GGG + Chr3:4332966-4332985 None:intergenic 20.0%
!! CTTAAAATTGTGAGATATTT+AGG + Chr3:4332255-4332274 None:intergenic 20.0%
!! GATAAATGTTGTTATACTAT+AGG + Chr3:4334749-4334768 None:intergenic 20.0%
!! GTGAAAATATCATGAAATTA+AGG - Chr3:4328534-4328553 MsG0380011739.01.T01:CDS 20.0%
!! TAAAATTGTTCATTTAAGAG+GGG + Chr3:4332965-4332984 None:intergenic 20.0%
!! TAACTACAATATTACTCATA+GGG + Chr3:4329586-4329605 None:intergenic 20.0%
!! TATGAGTAATATTGTAGTTA+TGG - Chr3:4329586-4329605 MsG0380011739.01.T01:intron 20.0%
!! TCTCAAATTCATGTAAAATT+TGG + Chr3:4328560-4328579 None:intergenic 20.0%
!! TGAGTATGTTTAAATATCAA+AGG + Chr3:4334802-4334821 None:intergenic 20.0%
!! TGATGAATTATTTACTTAGA+AGG + Chr3:4329535-4329554 None:intergenic 20.0%
!! TGATTTCATTTGTGTTAATT+TGG - Chr3:4328710-4328729 MsG0380011739.01.T01:intron 20.0%
!! TTAACTAATAAAATCGTGAT+TGG + Chr3:4328953-4328972 None:intergenic 20.0%
!! TTGAGAAATTATAATTCTAC+AGG - Chr3:4328574-4328593 MsG0380011739.01.T01:CDS 20.0%
!!! AAATGAACAATTTTAGCATT+AGG - Chr3:4332970-4332989 MsG0380011739.01.T01:CDS 20.0%
!!! TCCATATTTTATTTTCAAAG+GGG - Chr3:4328915-4328934 MsG0380011739.01.T01:intron 20.0%
!!! TCTGAAATATCAAAAAGAAA+AGG + Chr3:4329800-4329819 None:intergenic 20.0%
!!! TTTCATTTGTGTTAATTTTG+AGG - Chr3:4328713-4328732 MsG0380011739.01.T01:intron 20.0%
!!! TTTTCAGGTAATATTGTAAA+AGG - Chr3:4331860-4331879 MsG0380011739.01.T01:CDS 20.0%
!!! TTTTCATCTTTTGATATGAT+AGG - Chr3:4329269-4329288 MsG0380011739.01.T01:intron 20.0%
!!! TTTTTCATTCATGTTATCTA+TGG - Chr3:4332418-4332437 MsG0380011739.01.T01:intron 20.0%
!!! TTTTTTAGAGATAGAAGAAA+GGG + Chr3:4334776-4334795 None:intergenic 20.0%
!!! TTTTTTTAATGTATGTCTTG+GGG + Chr3:4334179-4334198 None:intergenic 20.0%
!!! TTTTTTTAGAGATAGAAGAA+AGG + Chr3:4334777-4334796 None:intergenic 20.0%
! AAATATAATCGCTATGACAT+AGG - Chr3:4330380-4330399 MsG0380011739.01.T01:intron 25.0%
! AACATAAAACAAATCCTATG+GGG + Chr3:4332554-4332573 None:intergenic 25.0%
! AACTTCTTTAATCATGTCAT+TGG - Chr3:4329824-4329843 MsG0380011739.01.T01:intron 25.0%
! AATAATAAACAGGTAAGCAT+AGG + Chr3:4330679-4330698 None:intergenic 25.0%
! AATATAATCGCTATGACATA+GGG - Chr3:4330381-4330400 MsG0380011739.01.T01:intron 25.0%
! AATCAAGGTATGAGTAATTA+TGG + Chr3:4333710-4333729 None:intergenic 25.0%
! AATCCAAATTTATTAAGCCA+TGG - Chr3:4335261-4335280 MsG0380011739.01.T01:intron 25.0%
! AGTAGATAAGAAAAACATAG+AGG + Chr3:4330196-4330215 None:intergenic 25.0%
! ATAATACTAAGTATATCTCC+TGG + Chr3:4330337-4330356 None:intergenic 25.0%
! ATACATTTCTAACTGTTAGA+AGG + Chr3:4334242-4334261 None:intergenic 25.0%
! ATCCAAATTTATTAAGCCAT+GGG - Chr3:4335262-4335281 MsG0380011739.01.T01:intron 25.0%
! ATGTTTATATCATAGTCATC+TGG + Chr3:4330654-4330673 None:intergenic 25.0%
! ATTCAAAGCAAAACAAAAAG+TGG - Chr3:4334126-4334145 MsG0380011739.01.T01:intron 25.0%
! ATTGATTATTTGACCGAAAA+GGG + Chr3:4333228-4333247 None:intergenic 25.0%
! CAAAAAAAAAACTTTAACCG+TGG - Chr3:4334651-4334670 MsG0380011739.01.T01:intron 25.0%
! CTCAATTTGTAGTTGTATTA+GGG - Chr3:4333858-4333877 MsG0380011739.01.T01:intron 25.0%
! GAAAAGAAATAGAAAATCAG+AGG + Chr3:4329254-4329273 None:intergenic 25.0%
! GCAATTAAATCATTGAATCA+AGG + Chr3:4333725-4333744 None:intergenic 25.0%
! GCTAAAATTGTTCATTTAAG+AGG + Chr3:4332967-4332986 None:intergenic 25.0%
! GTATAATTTAGTTGTCCAAA+AGG - Chr3:4334989-4335008 MsG0380011739.01.T01:intron 25.0%
! GTGTGTTAAATCAATAATCA+CGG + Chr3:4332779-4332798 None:intergenic 25.0%
! TCATATAGTATGAAAAGATG+TGG + Chr3:4335492-4335511 None:intergenic 25.0%
! TGAATTATTTACTTAGAAGG+AGG + Chr3:4329532-4329551 None:intergenic 25.0%
! TGTAATAGTTGTTTACAGAA+AGG + Chr3:4335143-4335162 None:intergenic 25.0%
! TGTAGATGAATATGATTACT+CGG - Chr3:4329434-4329453 MsG0380011739.01.T01:intron 25.0%
! TGTTAAGAATATGATGTACA+TGG - Chr3:4329498-4329517 MsG0380011739.01.T01:intron 25.0%
! TTAAAGCAATAGAGAGTAAA+AGG + Chr3:4334942-4334961 None:intergenic 25.0%
! TTAAATCAGCTTATTACTGT+CGG - Chr3:4330940-4330959 MsG0380011739.01.T01:CDS 25.0%
! TTAATACAACCGAGAAATTA+GGG + Chr3:4328879-4328898 None:intergenic 25.0%
! TTACTATGATGAGTGAATTA+TGG + Chr3:4335548-4335567 None:intergenic 25.0%
! TTATGCTCAATTAAAACAGA+TGG + Chr3:4330005-4330024 None:intergenic 25.0%
! TTCAGTAACAAAGAAAGTAA+TGG + Chr3:4332601-4332620 None:intergenic 25.0%
! TTCTTAAAACCCTAATTTCT+CGG - Chr3:4328867-4328886 MsG0380011739.01.T01:intron 25.0%
! TTTAAAAAGTGAGATATCAC+TGG - Chr3:4330101-4330120 MsG0380011739.01.T01:intron 25.0%
! TTTCATCTATGTAAAGATAC+TGG - Chr3:4331895-4331914 MsG0380011739.01.T01:intron 25.0%
!! AATTCTACAGGTTATTCTTT+TGG - Chr3:4328586-4328605 MsG0380011739.01.T01:CDS 25.0%
!! AATTCTGCATATGCATATTT+TGG - Chr3:4332462-4332481 MsG0380011739.01.T01:intron 25.0%
!! ATCAACAATTCTTCATTTTC+AGG - Chr3:4330779-4330798 MsG0380011739.01.T01:intron 25.0%
!! ATGAGCATTGCTTTAATAAT+TGG - Chr3:4332311-4332330 MsG0380011739.01.T01:intron 25.0%
!! GAACAAGAAATTGATTTCTT+TGG - Chr3:4333588-4333607 MsG0380011739.01.T01:intron 25.0%
!! GATACTCATTTTATGAGTTT+AGG - Chr3:4330736-4330755 MsG0380011739.01.T01:intron 25.0%
!! TATTGTTGCTTACTATATCT+TGG - Chr3:4336020-4336039 MsG0380011739.01.T01:five_prime_UTR 25.0%
!! TCCCCTTTGAAAATAAAATA+TGG + Chr3:4328919-4328938 None:intergenic 25.0%
!! TTGATATGATAGGTTCTAAT+TGG - Chr3:4329279-4329298 MsG0380011739.01.T01:intron 25.0%
!! TTTTAACCTTGTTGATGTTT+TGG - Chr3:4335978-4335997 MsG0380011739.01.T01:five_prime_UTR 25.0%
!!! AAGATTTTGACGTTGATTAA+AGG + Chr3:4331926-4331945 None:intergenic 25.0%
!!! ACGATTTTTAGCATTTTCTT+AGG + Chr3:4330257-4330276 None:intergenic 25.0%
!!! AGATTTTGACGTTGATTAAA+GGG + Chr3:4331925-4331944 None:intergenic 25.0%
!!! AGTCATCATTTTTGTAAAAG+AGG + Chr3:4332003-4332022 None:intergenic 25.0%
!!! ATAATCTCTACTTTGTTTTG+TGG - Chr3:4331675-4331694 MsG0380011739.01.T01:CDS 25.0%
!!! ATAGTCAATACGTCATTTTT+TGG - Chr3:4330452-4330471 MsG0380011739.01.T01:intron 25.0%
!!! ATATCTCACTTTTTAAAGCA+AGG + Chr3:4330098-4330117 None:intergenic 25.0%
!!! GCATTTTTTTAAATCTGTTG+TGG - Chr3:4331703-4331722 MsG0380011739.01.T01:intron 25.0%
!!! GCTGCCATATTTTTTTTTTT+TGG + Chr3:4335583-4335602 None:intergenic 25.0%
!!! TAATGCAGTTATTTCTATCT+TGG - Chr3:4334003-4334022 MsG0380011739.01.T01:intron 25.0%
!!! TATGCAAGTAAAAGCATTAA+GGG + Chr3:4331367-4331386 None:intergenic 25.0%
!!! TTTTTTTGAAAGAATCACCA+CGG + Chr3:4334639-4334658 None:intergenic 25.0%
AAAAAACAGGTAGAGTCTAA+TGG + Chr3:4332498-4332517 None:intergenic 30.0%
AAAAACAGGTAGAGTCTAAT+GGG + Chr3:4332497-4332516 None:intergenic 30.0%
AACCCATGGCTTAATAAATT+TGG + Chr3:4335267-4335286 None:intergenic 30.0%
ACAAACACACACAAAACTAT+TGG - Chr3:4329192-4329211 MsG0380011739.01.T01:intron 30.0%
ACAGCATCAAATAATGATTG+TGG - Chr3:4332831-4332850 MsG0380011739.01.T01:intron 30.0%
ACATAAAACAAATCCTATGG+GGG + Chr3:4332553-4332572 None:intergenic 30.0%
ACCTTCCTAAAAACAATGAA+AGG + Chr3:4335822-4335841 None:intergenic 30.0%
AGAAGGAAAACTAAATACCT+AGG + Chr3:4332717-4332736 None:intergenic 30.0%
AGCATTGCTTTAATAATTGG+TGG - Chr3:4332314-4332333 MsG0380011739.01.T01:intron 30.0%
AGGTGAGTAAACTAAATTAG+AGG + Chr3:4330176-4330195 None:intergenic 30.0%
AGTAGGTAGGTATATGAAAT+AGG + Chr3:4335522-4335541 None:intergenic 30.0%
ATATAATCGCTATGACATAG+GGG - Chr3:4330382-4330401 MsG0380011739.01.T01:intron 30.0%
ATATTCATCTACATCAGACT+CGG + Chr3:4329427-4329446 None:intergenic 30.0%
ATGTATATGACGTGAAAAGT+GGG - Chr3:4333556-4333575 MsG0380011739.01.T01:intron 30.0%
ATTATTCATTCGCATCATCA+TGG - Chr3:4333355-4333374 MsG0380011739.01.T01:intron 30.0%
CAAAAGGTTATCACAAGAAA+TGG - Chr3:4335005-4335024 MsG0380011739.01.T01:intron 30.0%
CAGATTCCTTTCATGAAATT+GGG + Chr3:4329964-4329983 None:intergenic 30.0%
CATTATGTTCAAATGTTTCG+CGG + Chr3:4331764-4331783 None:intergenic 30.0%
CCCTAACAAACAATAATATC+CGG + Chr3:4329117-4329136 None:intergenic 30.0%
CCTAATACAACTACAAATTG+AGG + Chr3:4333860-4333879 None:intergenic 30.0%
CCTCAATTTGTAGTTGTATT+AGG - Chr3:4333857-4333876 MsG0380011739.01.T01:intron 30.0%
CTGTTAGAAGGAACAAAATT+AGG + Chr3:4334230-4334249 None:intergenic 30.0%
CTGTTTGAATCCTAAATTCT+GGG - Chr3:4328741-4328760 MsG0380011739.01.T01:intron 30.0%
CTTAATACAACCGAGAAATT+AGG + Chr3:4328880-4328899 None:intergenic 30.0%
GAAAGAGAAAGTTATCACAA+AGG + Chr3:4334906-4334925 None:intergenic 30.0%
GACAGTAAAATACTTGATTG+CGG - Chr3:4330979-4330998 MsG0380011739.01.T01:CDS 30.0%
GAGGATGAAATTGATATTGA+TGG - Chr3:4329372-4329391 MsG0380011739.01.T01:intron 30.0%
GAGTAATATTGTAGTTATGG+TGG - Chr3:4329589-4329608 MsG0380011739.01.T01:intron 30.0%
GATTGATTATTTGACCGAAA+AGG + Chr3:4333229-4333248 None:intergenic 30.0%
GGATGTTAAATGATCGTTAA+TGG + Chr3:4334691-4334710 None:intergenic 30.0%
GGTGAATCTATTAATAGAGA+GGG - Chr3:4329393-4329412 MsG0380011739.01.T01:intron 30.0%
GTGAATCTATTAATAGAGAG+GGG - Chr3:4329394-4329413 MsG0380011739.01.T01:intron 30.0%
TAAATACAACCCAGAAATCA+GGG + Chr3:4328614-4328633 None:intergenic 30.0%
TAAATTACAGCCCAGAATTT+AGG + Chr3:4328754-4328773 None:intergenic 30.0%
TAAATTCTGGGCTGTAATTT+AGG - Chr3:4328753-4328772 MsG0380011739.01.T01:intron 30.0%
TAGCCAAAATCTTTATTGCA+TGG - Chr3:4335425-4335444 MsG0380011739.01.T01:intron 30.0%
TATAGTATGAAAAGATGTGG+TGG + Chr3:4335489-4335508 None:intergenic 30.0%
TCCGGATATTATTGTTTGTT+AGG - Chr3:4329113-4329132 MsG0380011739.01.T01:intron 30.0%
TCTGTTTGAATCCTAAATTC+TGG - Chr3:4328740-4328759 MsG0380011739.01.T01:intron 30.0%
TGAATCTATTAATAGAGAGG+GGG - Chr3:4329395-4329414 MsG0380011739.01.T01:intron 30.0%
TGAGAAGTAGCTAAAAACTA+AGG + Chr3:4332380-4332399 None:intergenic 30.0%
TGCAGTAAAAGATAATCTTC+TGG - Chr3:4331587-4331606 MsG0380011739.01.T01:intron 30.0%
TGGAATCAGAAACTTTGATA+TGG - Chr3:4332851-4332870 MsG0380011739.01.T01:intron 30.0%
TGGATGTTTAAATATCACCA+CGG + Chr3:4334671-4334690 None:intergenic 30.0%
TGGTGAATCTATTAATAGAG+AGG - Chr3:4329392-4329411 MsG0380011739.01.T01:intron 30.0%
TGTATGATGTTTATCTTGCT+TGG - Chr3:4329044-4329063 MsG0380011739.01.T01:intron 30.0%
TGTCGGAAAAATTTATCTTG+TGG - Chr3:4330957-4330976 MsG0380011739.01.T01:CDS 30.0%
TGTGGTGAATTATGTAACTA+TGG + Chr3:4329877-4329896 None:intergenic 30.0%
TTAAGCTAATCACAAGTGAA+GGG + Chr3:4335792-4335811 None:intergenic 30.0%
TTAATGTTTGAGTGGATCAA+AGG - Chr3:4334094-4334113 MsG0380011739.01.T01:intron 30.0%
TTGAAATTGTATAGACCACA+TGG - Chr3:4332279-4332298 MsG0380011739.01.T01:intron 30.0%
TTTAACTACTACACTTGCAT+TGG - Chr3:4330064-4330083 MsG0380011739.01.T01:intron 30.0%
! AGCTTTGTAGGTATATTTGA+GGG + Chr3:4330559-4330578 None:intergenic 30.0%
! ATCTACTCTGGTTTCTATAA+TGG - Chr3:4330817-4330836 MsG0380011739.01.T01:intron 30.0%
! ATTTTTACCCTTTCACTTTG+CGG + Chr3:4335363-4335382 None:intergenic 30.0%
! CATTTCTTGTGATAACCTTT+TGG + Chr3:4335007-4335026 None:intergenic 30.0%
! CCGGATATTATTGTTTGTTA+GGG - Chr3:4329114-4329133 MsG0380011739.01.T01:intron 30.0%
! CTGTTGGTTAAAAACTTATC+CGG - Chr3:4329095-4329114 MsG0380011739.01.T01:intron 30.0%
! CTTGAAAATCTCTTTTTGCT+TGG + Chr3:4335745-4335764 None:intergenic 30.0%
! GAACCATGCAATAAAGATTT+TGG + Chr3:4335431-4335450 None:intergenic 30.0%
! GTAGTAACAATTTTGGACTT+TGG - Chr3:4334330-4334349 MsG0380011739.01.T01:intron 30.0%
! TCTATCTTGGAAACTCATTT+TGG - Chr3:4334016-4334035 MsG0380011739.01.T01:intron 30.0%
! TTGTCTTGTTAATGTTTGAG+TGG - Chr3:4334086-4334105 MsG0380011739.01.T01:intron 30.0%
! TTTTAATGCTTATGCAGTTG+AGG - Chr3:4331204-4331223 MsG0380011739.01.T01:intron 30.0%
! TTTTATTGTCAGAAACATCC+TGG - Chr3:4331522-4331541 MsG0380011739.01.T01:intron 30.0%
! TTTTGCGGATGAATATGAAA+TGG - Chr3:4329341-4329360 MsG0380011739.01.T01:intron 30.0%
!! AAGTAATGGATGTATATCAG+CGG + Chr3:4332587-4332606 None:intergenic 30.0%
!! AGTTTTGTGTTTTTGAATGG+TGG + Chr3:4335644-4335663 None:intergenic 30.0%
!! ATCATTTTTGTAAAAGAGGC+TGG + Chr3:4331999-4332018 None:intergenic 30.0%
!! CTATGCAAGTAAAAGCATTA+AGG + Chr3:4331368-4331387 None:intergenic 30.0%
!! CTGGTTTCTATAATGGATTA+AGG - Chr3:4330824-4330843 MsG0380011739.01.T01:intron 30.0%
!! GTGAGTTTTGTGTTTTTGAA+TGG + Chr3:4335647-4335666 None:intergenic 30.0%
!! TAATGCATGAGTTGATATCA+TGG + Chr3:4335617-4335636 None:intergenic 30.0%
!! TATTGGTCTTATTAGCTCAT+TGG - Chr3:4334063-4334082 MsG0380011739.01.T01:intron 30.0%
!! TGGTAATGAGTAACTTTTTC+AGG - Chr3:4331845-4331864 MsG0380011739.01.T01:CDS 30.0%
!!! TAGTTTTTAGCTACTTCTCA+AGG - Chr3:4332380-4332399 MsG0380011739.01.T01:intron 30.0%
!!! TTGTTGCTAATGGTTTGTTT+TGG + Chr3:4335395-4335414 None:intergenic 30.0%
AAAACTAAGGCTCGAATTGA+AGG + Chr3:4332367-4332386 None:intergenic 35.0%
AAATTGTGCAGTCTGTTCAT+AGG - Chr3:4331092-4331111 MsG0380011739.01.T01:CDS 35.0%
ACAGAAAGGAAAATGTTGCT+TGG + Chr3:4335129-4335148 None:intergenic 35.0%
ACAGCAAACAAAGTGAAGTA+GGG + Chr3:4332144-4332163 None:intergenic 35.0%
AGACTATTGCTCCATTATCT+GGG - Chr3:4333325-4333344 MsG0380011739.01.T01:intron 35.0%
AGAGAAAATGTAGCCAAACA+AGG - Chr3:4335862-4335881 MsG0380011739.01.T01:intron 35.0%
AGAGAAAGTTATCACAAAGG+TGG + Chr3:4334903-4334922 None:intergenic 35.0%
AGGAAAAAATGTCGCAATCA+AGG + Chr3:4330237-4330256 None:intergenic 35.0%
AGGAAACATTGCTTACACTT+AGG - Chr3:4332990-4333009 MsG0380011739.01.T01:intron 35.0%
AGGTGAGTCATAAATCTCAA+TGG + Chr3:4332697-4332716 None:intergenic 35.0%
ATAGAAACCAGAGTAGATAC+AGG + Chr3:4330815-4330834 None:intergenic 35.0%
ATATGAAATGGAGGATGTAG+AGG - Chr3:4329353-4329372 MsG0380011739.01.T01:intron 35.0%
ATGAAAATATCCCCCATTCA+GGG - Chr3:4329745-4329764 MsG0380011739.01.T01:intron 35.0%
ATGAGGCTGTTAATATCATG+TGG + Chr3:4332053-4332072 None:intergenic 35.0%
ATTAATCACCGCAAAGTGAA+AGG - Chr3:4335352-4335371 MsG0380011739.01.T01:intron 35.0%
ATTGACTATGTATACCCCAA+TGG + Chr3:4330441-4330460 None:intergenic 35.0%
CAAACAGGATTGTAAAAGCA+CGG - Chr3:4330707-4330726 MsG0380011739.01.T01:intron 35.0%
CAAATATGTGACTAAACCCA+TGG + Chr3:4335281-4335300 None:intergenic 35.0%
CATGTATATGACGTGAAAAG+TGG - Chr3:4333555-4333574 MsG0380011739.01.T01:intron 35.0%
CTAAATACAACCCAGAAATC+AGG + Chr3:4328615-4328634 None:intergenic 35.0%
CTTAAATCCAATGATCCTGT+TGG - Chr3:4335955-4335974 MsG0380011739.01.T01:five_prime_UTR 35.0%
CTTAAGCTAATCACAAGTGA+AGG + Chr3:4335793-4335812 None:intergenic 35.0%
CTTTGTAGGTATATTTGAGG+GGG + Chr3:4330557-4330576 None:intergenic 35.0%
GAATCTATTAATAGAGAGGG+GGG - Chr3:4329396-4329415 MsG0380011739.01.T01:intron 35.0%
GATTTCTTTGGTGAGATATC+AGG - Chr3:4333600-4333619 MsG0380011739.01.T01:intron 35.0%
GCAGATTCCTTTCATGAAAT+TGG + Chr3:4329965-4329984 None:intergenic 35.0%
GCTCATTAAATAGTTCCATG+TGG + Chr3:4332297-4332316 None:intergenic 35.0%
GCTTTGTAGGTATATTTGAG+GGG + Chr3:4330558-4330577 None:intergenic 35.0%
GGTTATGATCCAAGTTTCTT+TGG - Chr3:4336057-4336076 MsG0380011739.01.T01:five_prime_UTR 35.0%
GTCATAAATCTCAATGGCAT+TGG + Chr3:4332691-4332710 None:intergenic 35.0%
GTGGTGCAACATGATTTAAA+GGG + Chr3:4331391-4331410 None:intergenic 35.0%
GTTAAAACCAACAGGATCAT+TGG + Chr3:4335965-4335984 None:intergenic 35.0%
GTTTATATCAGTGTGTGTGT+GGG - Chr3:4333884-4333903 MsG0380011739.01.T01:intron 35.0%
TAATCTAAGTGCCCAGATAA+TGG + Chr3:4333339-4333358 None:intergenic 35.0%
TACAAATTGAGGACATTTGC+AGG + Chr3:4333849-4333868 None:intergenic 35.0%
TAGGACATTTAACTGCACAA+TGG - Chr3:4330853-4330872 MsG0380011739.01.T01:CDS 35.0%
TATACATGCACAAAATCTGC+AGG + Chr3:4333543-4333562 None:intergenic 35.0%
TATAGCCATATACTTGCCAT+CGG + Chr3:4333514-4333533 None:intergenic 35.0%
TATGAAAATATCCCCCATTC+AGG - Chr3:4329744-4329763 MsG0380011739.01.T01:intron 35.0%
TCAACAAGGTTAAAACCAAC+AGG + Chr3:4335973-4335992 None:intergenic 35.0%
TCACCACGGTTAAAGTTAAA+CGG + Chr3:4334625-4334644 None:intergenic 35.0%
TCCAATTTCGATGCTATATG+AGG + Chr3:4332070-4332089 None:intergenic 35.0%
TGAATTATGGAAGAGTAGGT+AGG + Chr3:4335535-4335554 None:intergenic 35.0%
TGAGTGAATTATGGAAGAGT+AGG + Chr3:4335539-4335558 None:intergenic 35.0%
TGGACACACTGTTTGAAAAA+AGG + Chr3:4335075-4335094 None:intergenic 35.0%
TGTTCATTTAAGAGGGGATA+GGG + Chr3:4332959-4332978 None:intergenic 35.0%
TGTTTATATCAGTGTGTGTG+TGG - Chr3:4333883-4333902 MsG0380011739.01.T01:intron 35.0%
TTAATCACCGCAAAGTGAAA+GGG - Chr3:4335353-4335372 MsG0380011739.01.T01:intron 35.0%
TTGAGATTTATGACTCACCT+AGG - Chr3:4332697-4332716 MsG0380011739.01.T01:intron 35.0%
TTGATTTAACACACCTTTCC+TGG - Chr3:4332785-4332804 MsG0380011739.01.T01:intron 35.0%
TTGTTCATTTAAGAGGGGAT+AGG + Chr3:4332960-4332979 None:intergenic 35.0%
! AAAGATAATCTTCTGGTTGC+TGG - Chr3:4331594-4331613 MsG0380011739.01.T01:intron 35.0%
! AGACAATCCTGAAAGTATGT+TGG - Chr3:4333169-4333188 MsG0380011739.01.T01:intron 35.0%
! ATACCGAATCCCTTTTCATT+GGG - Chr3:4333640-4333659 MsG0380011739.01.T01:intron 35.0%
! ATCGAAATTGGATGATGATG+TGG - Chr3:4332078-4332097 MsG0380011739.01.T01:intron 35.0%
! ATGTTGGTTGACTCTCAAAA+TGG - Chr3:4333185-4333204 MsG0380011739.01.T01:CDS 35.0%
! ATTTTTGTAAAAGAGGCTGG+CGG + Chr3:4331996-4332015 None:intergenic 35.0%
! CGGATAAGTTTTTAACCAAC+AGG + Chr3:4329097-4329116 None:intergenic 35.0%
! CTGATTTCTGGGTTGTATTT+AGG - Chr3:4328613-4328632 MsG0380011739.01.T01:CDS 35.0%
! GAGCTTTGTAGGTATATTTG+AGG + Chr3:4330560-4330579 None:intergenic 35.0%
! GTTTGGCTACATTTTCTCTT+TGG + Chr3:4335861-4335880 None:intergenic 35.0%
! TCACAATTCTTTTCAGTGTG+TGG + Chr3:4330630-4330649 None:intergenic 35.0%
! TCTGAAGTACTCAATGTTTC+TGG - Chr3:4331314-4331333 MsG0380011739.01.T01:intron 35.0%
! TGTGGTGGAAAAGAAAGATA+AGG + Chr3:4335474-4335493 None:intergenic 35.0%
!! AAGGATTGGTTTGCAACTAA+GGG + Chr3:4330304-4330323 None:intergenic 35.0%
!! ATGAGTTGATATCATGGATG+AGG + Chr3:4335611-4335630 None:intergenic 35.0%
!! TAAGGATTGGTTTGCAACTA+AGG + Chr3:4330305-4330324 None:intergenic 35.0%
!! TAATGGATTAAGGATGCACT+AGG - Chr3:4330834-4330853 MsG0380011739.01.T01:intron 35.0%
!! TGGTGATGCTGAATATTTTG+CGG - Chr3:4329326-4329345 MsG0380011739.01.T01:intron 35.0%
!!! AAAGATTTTGGCTAGTGACT+TGG + Chr3:4335419-4335438 None:intergenic 35.0%
!!! ACTGGCCTTTCATTGTTTTT+AGG - Chr3:4335814-4335833 MsG0380011739.01.T01:intron 35.0%
!!! GCCTTTCATTGTTTTTAGGA+AGG - Chr3:4335818-4335837 MsG0380011739.01.T01:intron 35.0%
!!! GTCAATACGTCATTTTTTGG+TGG - Chr3:4330455-4330474 MsG0380011739.01.T01:intron 35.0%
AACCCCAATGAAAAGGGATT+CGG + Chr3:4333646-4333665 None:intergenic 40.0%
AATATTCAGCATCACCACCT+TGG + Chr3:4329323-4329342 None:intergenic 40.0%
AATGGATGTATATCAGCGGA+TGG + Chr3:4332583-4332602 None:intergenic 40.0%
AATTGTTAGCGAGAACTGTG+AGG - Chr3:4331031-4331050 MsG0380011739.01.T01:CDS 40.0%
ACCACGGTTAAAGTTAAACG+GGG + Chr3:4334623-4334642 None:intergenic 40.0%
ACCTGCTTTACATATCCTCT+AGG - Chr3:4333793-4333812 MsG0380011739.01.T01:intron 40.0%
ATCAGAAGTAGCTTACCATC+TGG + Chr3:4333143-4333162 None:intergenic 40.0%
ATCCCAAACCCCAATGAAAA+GGG + Chr3:4333652-4333671 None:intergenic 40.0%
ATCTTGGCTACTTCTAGCAA+TGG - Chr3:4336036-4336055 MsG0380011739.01.T01:five_prime_UTR 40.0%
CACAGCAAACAAAGTGAAGT+AGG + Chr3:4332145-4332164 None:intergenic 40.0%
CACCACGGTTAAAGTTAAAC+GGG + Chr3:4334624-4334643 None:intergenic 40.0%
CAGACTATTGCTCCATTATC+TGG - Chr3:4333324-4333343 MsG0380011739.01.T01:intron 40.0%
CAGAGACTTAGGACTTTACA+GGG + Chr3:4331960-4331979 None:intergenic 40.0%
CAGCAAACAAAGTGAAGTAG+GGG + Chr3:4332143-4332162 None:intergenic 40.0%
CCTGCTTTACATATCCTCTA+GGG - Chr3:4333794-4333813 MsG0380011739.01.T01:intron 40.0%
CTGCTTTACATATCCTCTAG+GGG - Chr3:4333795-4333814 MsG0380011739.01.T01:intron 40.0%
CTTCATGCTCTTCATTTCTC+TGG - Chr3:4334710-4334729 MsG0380011739.01.T01:intron 40.0%
GAAAATATGTCTCATCGCCA+AGG - Chr3:4329303-4329322 MsG0380011739.01.T01:intron 40.0%
GAAACATCCTGGAAGTCTAT+TGG - Chr3:4331533-4331552 MsG0380011739.01.T01:intron 40.0%
GAGTCAACCAACATACTTTC+AGG + Chr3:4333179-4333198 None:intergenic 40.0%
GCTGTTAATATCATGTGGCA+TGG + Chr3:4332048-4332067 None:intergenic 40.0%
GCTTATGCAGTTGAGGAATT+TGG - Chr3:4331211-4331230 MsG0380011739.01.T01:intron 40.0%
GGAAACGAGGTATAGTAAGT+AGG - Chr3:4333905-4333924 MsG0380011739.01.T01:intron 40.0%
GGTAAGCTACTTCTGATTGT+TGG - Chr3:4333146-4333165 MsG0380011739.01.T01:intron 40.0%
GGTGGAAAAGAAAGATAAGG+TGG + Chr3:4335471-4335490 None:intergenic 40.0%
GGTGGTGCAACATGATTTAA+AGG + Chr3:4331392-4331411 None:intergenic 40.0%
GTAAGTAGGCTAGAAGTTGA+TGG - Chr3:4333919-4333938 MsG0380011739.01.T01:intron 40.0%
TAAGGGTTATTCACCTCTGA+TGG + Chr3:4331350-4331369 None:intergenic 40.0%
TACACTTAGGCTGTACTGTA+TGG - Chr3:4333003-4333022 MsG0380011739.01.T01:intron 40.0%
TATGGTAGCCTTCTCGAATA+TGG - Chr3:4333678-4333697 MsG0380011739.01.T01:intron 40.0%
TCACTGAGAACTGTGACATA+AGG + Chr3:4331265-4331284 None:intergenic 40.0%
TCAGGGTGAACTTATTTGCA+AGG - Chr3:4331623-4331642 MsG0380011739.01.T01:CDS 40.0%
TCCGCCACTAAATACTTTGA+GGG - Chr3:4330578-4330597 MsG0380011739.01.T01:intron 40.0%
TCGATTATTGTTGCAGACAG+TGG - Chr3:4329217-4329236 MsG0380011739.01.T01:intron 40.0%
TGAAAATATCCCCCATTCAG+GGG - Chr3:4329746-4329765 MsG0380011739.01.T01:intron 40.0%
TGCAGTTGAGGAATTTGGTT+TGG - Chr3:4331216-4331235 MsG0380011739.01.T01:intron 40.0%
TGCGGATGAATATGAAATGG+AGG - Chr3:4329344-4329363 MsG0380011739.01.T01:intron 40.0%
TGCTGCAGCATAGCATAAAA+AGG + Chr3:4333107-4333126 None:intergenic 40.0%
TGTGAATCTTGAGTAGTACC+TGG - Chr3:4331116-4331135 MsG0380011739.01.T01:CDS 40.0%
TTCAGTGTGTGGTATGAGTT+CGG + Chr3:4330619-4330638 None:intergenic 40.0%
TTCTTCCGATGGCAAGTATA+TGG - Chr3:4333506-4333525 MsG0380011739.01.T01:intron 40.0%
! AATCCCTTTTCATTGGGGTT+TGG - Chr3:4333646-4333665 MsG0380011739.01.T01:intron 40.0%
! ACCCTCAAAGTATTTAGTGG+CGG + Chr3:4330582-4330601 None:intergenic 40.0%
! ACTTTTGTTGACCTTGTGAG+AGG + Chr3:4335709-4335728 None:intergenic 40.0%
! ATCCCTTTTCATTGGGGTTT+GGG - Chr3:4333647-4333666 MsG0380011739.01.T01:intron 40.0%
! ATGAAAAGGGATTCGGTATC+TGG + Chr3:4333639-4333658 None:intergenic 40.0%
! CAGAGAAATGAAGAGCATGA+AGG + Chr3:4334712-4334731 None:intergenic 40.0%
! CTACTTCACTTTGTTTGCTG+TGG - Chr3:4332143-4332162 MsG0380011739.01.T01:intron 40.0%
! CTTTTGTTGACCTTGTGAGA+GGG + Chr3:4335708-4335727 None:intergenic 40.0%
! GATACCGAATCCCTTTTCAT+TGG - Chr3:4333639-4333658 MsG0380011739.01.T01:intron 40.0%
! GATTGTAAAAGCACGGACAA+AGG - Chr3:4330714-4330733 MsG0380011739.01.T01:intron 40.0%
! GCAACCCTCAAAGTATTTAG+TGG + Chr3:4330585-4330604 None:intergenic 40.0%
! GCAGTTGAGGAATTTGGTTT+GGG - Chr3:4331217-4331236 MsG0380011739.01.T01:intron 40.0%
! GCCTCATATAGCATCGAAAT+TGG - Chr3:4332066-4332085 MsG0380011739.01.T01:intron 40.0%
! GGTTGACTCTCAAAATGGAA+AGG - Chr3:4333190-4333209 MsG0380011739.01.T01:CDS 40.0%
! TACCGAATCCCTTTTCATTG+GGG - Chr3:4333641-4333660 MsG0380011739.01.T01:intron 40.0%
! TTTACATATCCTCTAGGGGT+AGG - Chr3:4333799-4333818 MsG0380011739.01.T01:intron 40.0%
!! AGGATTGGTTTGCAACTAAG+GGG + Chr3:4330303-4330322 None:intergenic 40.0%
!! CTTGTGATTAGCTTAAGCAC+TGG - Chr3:4335796-4335815 MsG0380011739.01.T01:intron 40.0%
!! GACTCTTGTTGTTTCTGATG+TGG - Chr3:4334448-4334467 MsG0380011739.01.T01:intron 40.0%
!! TTGTTGTTTCTGATGTGGCA+AGG - Chr3:4334453-4334472 MsG0380011739.01.T01:intron 40.0%
!!! ACCTTGTTGATGTTTTGGCT+TGG - Chr3:4335983-4336002 MsG0380011739.01.T01:five_prime_UTR 40.0%
!!! CCTTGTTGATGTTTTGGCTT+GGG - Chr3:4335984-4336003 MsG0380011739.01.T01:five_prime_UTR 40.0%
!!! CTTGTTGATGTTTTGGCTTG+GGG - Chr3:4335985-4336004 MsG0380011739.01.T01:five_prime_UTR 40.0%
!!! CTTTTGGAACCCTGATTTCT+GGG - Chr3:4328602-4328621 MsG0380011739.01.T01:CDS 40.0%
!!! TCTTTTGGAACCCTGATTTC+TGG - Chr3:4328601-4328620 MsG0380011739.01.T01:CDS 40.0%
AAAGCAAAGGAGTCACAGTG+GGG + Chr3:4333064-4333083 None:intergenic 45.0%
AACCTTTGCTACTGGAAACC+AGG - Chr3:4333392-4333411 MsG0380011739.01.T01:intron 45.0%
AAGAAGAGGACAAGACATCC+AGG - Chr3:4329650-4329669 MsG0380011739.01.T01:intron 45.0%
AAGGTTTCAACCCTCTCACA+AGG - Chr3:4335695-4335714 MsG0380011739.01.T01:intron 45.0%
AAGTATATCTCCTGGCGTAG+TGG + Chr3:4330329-4330348 None:intergenic 45.0%
AATATGTCTCATCGCCAAGG+TGG - Chr3:4329306-4329325 MsG0380011739.01.T01:intron 45.0%
ACATCCTGGAAGTCTATTGG+AGG - Chr3:4331536-4331555 MsG0380011739.01.T01:intron 45.0%
AGAAAGCAAAGGAGTCACAG+TGG + Chr3:4333066-4333085 None:intergenic 45.0%
AGAAGAGGACAAGACATCCA+GGG - Chr3:4329651-4329670 MsG0380011739.01.T01:intron 45.0%
AGGACAAAACCTGTCGGATT+TGG - Chr3:4333412-4333431 MsG0380011739.01.T01:intron 45.0%
AGTAGCAAAGGTTACCCCAT+CGG + Chr3:4333385-4333404 None:intergenic 45.0%
AGTAGTACCTGGCATGTCAT+AGG - Chr3:4331127-4331146 MsG0380011739.01.T01:CDS 45.0%
AGTTTGCCGATACCTTTCTC+TGG + Chr3:4329703-4329722 None:intergenic 45.0%
ATAACCAAGATCCGCCATTG+GGG - Chr3:4330424-4330443 MsG0380011739.01.T01:intron 45.0%
ATACATCAACCTACCCCTAG+AGG + Chr3:4333811-4333830 None:intergenic 45.0%
ATCATCATGGAATCCCGATG+GGG - Chr3:4333368-4333387 MsG0380011739.01.T01:intron 45.0%
ATCCTGGAAGTCTATTGGAG+GGG - Chr3:4331538-4331557 MsG0380011739.01.T01:intron 45.0%
ATTCATAGAGAACCGTGGAC+CGG - Chr3:4329897-4329916 MsG0380011739.01.T01:intron 45.0%
CAAACAAAGTGAAGTAGGGG+TGG + Chr3:4332140-4332159 None:intergenic 45.0%
CAAGGCTTACCTGAGCAAAA+TGG - Chr3:4335880-4335899 MsG0380011739.01.T01:intron 45.0%
CATAACCAAGATCCGCCATT+GGG - Chr3:4330423-4330442 MsG0380011739.01.T01:intron 45.0%
CATACTTCTCTCAGTCCAGA+TGG - Chr3:4333125-4333144 MsG0380011739.01.T01:intron 45.0%
CATCATCATGGAATCCCGAT+GGG - Chr3:4333367-4333386 MsG0380011739.01.T01:intron 45.0%
CATCCTGGAAGTCTATTGGA+GGG - Chr3:4331537-4331556 MsG0380011739.01.T01:intron 45.0%
CCACAATTCATAGAGAACCG+TGG - Chr3:4329892-4329911 MsG0380011739.01.T01:intron 45.0%
CCACGGTTAAAGTTAAACGG+GGG + Chr3:4334622-4334641 None:intergenic 45.0%
CCACGGTTCTCTATGAATTG+TGG + Chr3:4329895-4329914 None:intergenic 45.0%
CCCAAGCCAAAACATCAACA+AGG + Chr3:4335987-4336006 None:intergenic 45.0%
CCCTAGAGGATATGTAAAGC+AGG + Chr3:4333797-4333816 None:intergenic 45.0%
CTCCGCCACTAAATACTTTG+AGG - Chr3:4330577-4330596 MsG0380011739.01.T01:intron 45.0%
GAAACCAGGACAAAACCTGT+CGG - Chr3:4333406-4333425 MsG0380011739.01.T01:intron 45.0%
GAAAGCAAAGGAGTCACAGT+GGG + Chr3:4333065-4333084 None:intergenic 45.0%
GAAAGTTGTAGCAACGCTCT+AGG + Chr3:4332343-4332362 None:intergenic 45.0%
GACTATGTATACCCCAATGG+CGG + Chr3:4330438-4330457 None:intergenic 45.0%
GAGTACTTCAGAACTTGTGC+AGG + Chr3:4331306-4331325 None:intergenic 45.0%
GATCCCAAACCCCAATGAAA+AGG + Chr3:4333653-4333672 None:intergenic 45.0%
GATTGCGGCTTCAAATCAAC+AGG - Chr3:4330994-4331013 MsG0380011739.01.T01:CDS 45.0%
GCAGACATGTGACTTACATG+TGG - Chr3:4331825-4331844 MsG0380011739.01.T01:CDS 45.0%
GCAGAGACTTAGGACTTTAC+AGG + Chr3:4331961-4331980 None:intergenic 45.0%
GCGGAATTTATCCAAGTCAG+TGG - Chr3:4333440-4333459 MsG0380011739.01.T01:intron 45.0%
GGACAAAACCTGTCGGATTT+GGG - Chr3:4333413-4333432 MsG0380011739.01.T01:intron 45.0%
GGTATGAGTAATTATGGCGC+CGG + Chr3:4333704-4333723 None:intergenic 45.0%
GGTTCGCCCAATTTCATGAA+AGG - Chr3:4329955-4329974 MsG0380011739.01.T01:intron 45.0%
GTAGCACGAGGTCTAAATGA+TGG - Chr3:4331420-4331439 MsG0380011739.01.T01:intron 45.0%
GTTTGAGTGGATCAAAGGCA+GGG - Chr3:4334099-4334118 MsG0380011739.01.T01:intron 45.0%
TAATCGCTATGACATAGGGG+TGG - Chr3:4330385-4330404 MsG0380011739.01.T01:intron 45.0%
TAGAACAAAGCTCCGGTGTA+CGG + Chr3:4330149-4330168 None:intergenic 45.0%
TATCATGTGGCATGGCAAGA+TGG + Chr3:4332040-4332059 None:intergenic 45.0%
TCAGTGTGTGGTATGAGTTC+GGG + Chr3:4330618-4330637 None:intergenic 45.0%
TCATAACCAAGATCCGCCAT+TGG - Chr3:4330422-4330441 MsG0380011739.01.T01:intron 45.0%
TCCAAGAGACTCACATTCAC+TGG + Chr3:4332915-4332934 None:intergenic 45.0%
TCGCAATCAAGGCTTGAACT+CGG + Chr3:4330226-4330245 None:intergenic 45.0%
TGTTTGAGTGGATCAAAGGC+AGG - Chr3:4334098-4334117 MsG0380011739.01.T01:intron 45.0%
TTCAAAGCCTATGACATGCC+AGG + Chr3:4331137-4331156 None:intergenic 45.0%
TTGTGAGAGGGTTGAAACCT+TGG + Chr3:4335696-4335715 None:intergenic 45.0%
! AAGTCAGTGGCAGTGTTGAA+GGG - Chr3:4333453-4333472 MsG0380011739.01.T01:intron 45.0%
! ACACCTTTCCTGGTTTGTAG+TGG - Chr3:4332795-4332814 MsG0380011739.01.T01:intron 45.0%
! ACCTTTCTCTGGTGATGCTA+AGG + Chr3:4329692-4329711 None:intergenic 45.0%
! AGGAGTGTAGAACAAAGCTC+CGG + Chr3:4330156-4330175 None:intergenic 45.0%
! ATTTAGTGGCGGAGCTTTGT+AGG + Chr3:4330571-4330590 None:intergenic 45.0%
! GATAATCTTCTGGTTGCTGG+AGG - Chr3:4331597-4331616 MsG0380011739.01.T01:intron 45.0%
! GCAGTGTTGAAGGGAAATCT+CGG - Chr3:4333462-4333481 MsG0380011739.01.T01:intron 45.0%
! GCATCACCAGAGAAAGGTAT+CGG - Chr3:4329694-4329713 MsG0380011739.01.T01:intron 45.0%
! GTAGTACTCTACGCCCTTTT+CGG - Chr3:4333212-4333231 MsG0380011739.01.T01:CDS 45.0%
! TGTGTCACACCATTTTGCTC+AGG + Chr3:4335892-4335911 None:intergenic 45.0%
! TGTTTCTGATGTGGCAAGGT+TGG - Chr3:4334457-4334476 MsG0380011739.01.T01:intron 45.0%
!! AAATCCGACAGGTTTTGTCC+TGG + Chr3:4333413-4333432 None:intergenic 45.0%
!! AACAGATGGTTTTGCCTCTC+TGG + Chr3:4329991-4330010 None:intergenic 45.0%
!! ACTTTGTTTGCTGTGGTGCT+TGG - Chr3:4332150-4332169 MsG0380011739.01.T01:intron 45.0%
!! CAAAGCATTTCCGTTTTCCC+TGG - Chr3:4332889-4332908 MsG0380011739.01.T01:CDS 45.0%
!! GAGAAAGGTATCGGCAAACT+AGG - Chr3:4329703-4329722 MsG0380011739.01.T01:intron 45.0%
!! GTGACTTGGCTTGTTGCTAA+TGG + Chr3:4335405-4335424 None:intergenic 45.0%
!! GTTGATGGTGCAAACAGAGT+TGG - Chr3:4333934-4333953 MsG0380011739.01.T01:intron 45.0%
!! TTGCTCAGGTAAGCCTTGTT+TGG + Chr3:4335878-4335897 None:intergenic 45.0%
!!! GTTTTGGCTTGGGGTTCTTT+AGG - Chr3:4335994-4336013 MsG0380011739.01.T01:five_prime_UTR 45.0%
!! AAAAATAAAAAAATCATATT+AGG + Chr3:4333298-4333317 None:intergenic 5.0%
!! ATTAAAAAAAAAAAAAAAGA+GGG + Chr3:4331191-4331210 None:intergenic 5.0%
!! TTATTTATTATTTACATATT+TGG - Chr3:4330531-4330550 MsG0380011739.01.T01:intron 5.0%
!!! AATTTTATATTTTCTTTTAT+TGG + Chr3:4335214-4335233 None:intergenic 5.0%
!!! TATTTTGATATTTTTAATAA+TGG - Chr3:4332744-4332763 MsG0380011739.01.T01:intron 5.0%
AACCCCTCCAATAGACTTCC+AGG + Chr3:4331543-4331562 None:intergenic 50.0%
AAGACATCCAGGGGATTCCT+TGG - Chr3:4329661-4329680 MsG0380011739.01.T01:intron 50.0%
AAGGAATCTGCGTACCAGAG+AGG - Chr3:4329974-4329993 MsG0380011739.01.T01:intron 50.0%
AAGTGAAGTAGGGGTGGCAA+TGG + Chr3:4332134-4332153 None:intergenic 50.0%
ACAGCTGCTCAAGCAAGAAG+AGG - Chr3:4329636-4329655 MsG0380011739.01.T01:intron 50.0%
ACTTGCCATCGGAAGAATGC+CGG + Chr3:4333503-4333522 None:intergenic 50.0%
AGAATGCCGGATTGAACGGA+TGG + Chr3:4333490-4333509 None:intergenic 50.0%
AGACATCCAGGGGATTCCTT+GGG - Chr3:4329662-4329681 MsG0380011739.01.T01:intron 50.0%
AGACTCACATTCACTGGCCA+GGG + Chr3:4332909-4332928 None:intergenic 50.0%
AGCTGGTGACAAACGTGCTA+AGG - Chr3:4335918-4335937 MsG0380011739.01.T01:intron 50.0%
ATCTCCTGGCGTAGTGGTTA+AGG + Chr3:4330323-4330342 None:intergenic 50.0%
CAATCCTTAACCACTACGCC+AGG - Chr3:4330316-4330335 MsG0380011739.01.T01:intron 50.0%
CACAGTTCTCAGTGACACAC+TGG - Chr3:4331270-4331289 MsG0380011739.01.T01:intron 50.0%
CATTCACTGGCCAGGGAAAA+CGG + Chr3:4332902-4332921 None:intergenic 50.0%
CCATCAAGCTTGTCCTTCCA+AGG - Chr3:4335676-4335695 MsG0380011739.01.T01:intron 50.0%
CCTTGGAAGGACAAGCTTGA+TGG + Chr3:4335679-4335698 None:intergenic 50.0%
CGGAAGAATGCCGGATTGAA+CGG + Chr3:4333494-4333513 None:intergenic 50.0%
CTATGACATAGGGGTGGTCA+TGG - Chr3:4330391-4330410 MsG0380011739.01.T01:intron 50.0%
CTGGCGTAGTGGTTAAGGAT+TGG + Chr3:4330318-4330337 None:intergenic 50.0%
CTGGTTGCTGGAGGATTTCA+GGG - Chr3:4331606-4331625 MsG0380011739.01.T01:intron 50.0%
CTTGAGCAAAAGCTGACACC+AGG + Chr3:4332642-4332661 None:intergenic 50.0%
GAACTGCACCACTACAAACC+AGG + Chr3:4332806-4332825 None:intergenic 50.0%
GAAGAGGACAAGACATCCAG+GGG - Chr3:4329652-4329671 MsG0380011739.01.T01:intron 50.0%
GAGAGGGTTGAAACCTTGGA+AGG + Chr3:4335692-4335711 None:intergenic 50.0%
GATGGGGTAACCTTTGCTAC+TGG - Chr3:4333384-4333403 MsG0380011739.01.T01:intron 50.0%
GCACCACTACAAACCAGGAA+AGG + Chr3:4332801-4332820 None:intergenic 50.0%
GCATCATCATGGAATCCCGA+TGG - Chr3:4333366-4333385 MsG0380011739.01.T01:intron 50.0%
GCCAGTGAATGTGAGTCTCT+TGG - Chr3:4332911-4332930 MsG0380011739.01.T01:CDS 50.0%
GCCTTAGCATCACCAGAGAA+AGG - Chr3:4329688-4329707 MsG0380011739.01.T01:intron 50.0%
GCGAGGTGCAATACACTTGT+GGG + Chr3:4330127-4330146 None:intergenic 50.0%
GCGGATCTTGGTTATGACAG+GGG + Chr3:4330419-4330438 None:intergenic 50.0%
GCTATACATGTGTCCCCCAT+AGG - Chr3:4332537-4332556 MsG0380011739.01.T01:intron 50.0%
GCTGTAGCCTGTATCTACTC+TGG - Chr3:4330805-4330824 MsG0380011739.01.T01:intron 50.0%
GCTTAATGCAGCGATCCTGT+TGG - Chr3:4329079-4329098 MsG0380011739.01.T01:intron 50.0%
GGCGGATCTTGGTTATGACA+GGG + Chr3:4330420-4330439 None:intergenic 50.0%
GGGAGCAAATGCAGAGACTT+AGG + Chr3:4331971-4331990 None:intergenic 50.0%
GTAGCAAAGGTTACCCCATC+GGG + Chr3:4333384-4333403 None:intergenic 50.0%
GTAGCCTTCTCGAATATGGC+CGG - Chr3:4333682-4333701 MsG0380011739.01.T01:intron 50.0%
GTCCTGGTTTCCAGTAGCAA+AGG + Chr3:4333397-4333416 None:intergenic 50.0%
GTGATGCTAAGGCTATCCCA+AGG + Chr3:4329681-4329700 None:intergenic 50.0%
GTGGTATGAGTTCGGGTATG+TGG + Chr3:4330611-4330630 None:intergenic 50.0%
TCAATCCGGCATTCTTCCGA+TGG - Chr3:4333495-4333514 MsG0380011739.01.T01:intron 50.0%
TCTGGTTGCTGGAGGATTTC+AGG - Chr3:4331605-4331624 MsG0380011739.01.T01:intron 50.0%
TGGGGTGGGAATAGATAACG+AGG + Chr3:4333046-4333065 None:intergenic 50.0%
TGTAAAAGAGGCTGGCGGTA+GGG + Chr3:4331991-4332010 None:intergenic 50.0%
TTAGACCTCGTGCTACGTGA+TGG + Chr3:4331416-4331435 None:intergenic 50.0%
TTGTAAAAGAGGCTGGCGGT+AGG + Chr3:4331992-4332011 None:intergenic 50.0%
! CAAGTCAGTGGCAGTGTTGA+AGG - Chr3:4333452-4333471 MsG0380011739.01.T01:intron 50.0%
! CCCCCGTTTAACTTTAACCG+TGG - Chr3:4334619-4334638 MsG0380011739.01.T01:intron 50.0%
! CTTCAACACTGCCACTGACT+TGG + Chr3:4333454-4333473 None:intergenic 50.0%
! GGGGTTTGGGATCGTACTTA+TGG - Chr3:4333660-4333679 MsG0380011739.01.T01:intron 50.0%
! TGGATGATGATGTGGCGTTG+AGG - Chr3:4332086-4332105 MsG0380011739.01.T01:intron 50.0%
! TGGCGGATCTTGGTTATGAC+AGG + Chr3:4330421-4330440 None:intergenic 50.0%
!! CTGGTGTCAGCTTTTGCTCA+AGG - Chr3:4332640-4332659 MsG0380011739.01.T01:intron 50.0%
!! GGTGTGACACACTTTGAAGC+TGG - Chr3:4335901-4335920 MsG0380011739.01.T01:intron 50.0%
!! TATACCCCAATGGCGGATCT+TGG + Chr3:4330431-4330450 None:intergenic 50.0%
AGCTGACACCAGGTCGATCT+AGG + Chr3:4332632-4332651 None:intergenic 55.0%
ATATCCCCCATTCAGGGGAC+AGG - Chr3:4329751-4329770 MsG0380011739.01.T01:intron 55.0%
ATGCAGCACCTAGATCGACC+TGG - Chr3:4332621-4332640 MsG0380011739.01.T01:intron 55.0%
CAAAGGAGTCACAGTGGGGT+GGG + Chr3:4333060-4333079 None:intergenic 55.0%
CAGTGTGTGTGTGGGAAACG+AGG - Chr3:4333892-4333911 MsG0380011739.01.T01:intron 55.0%
GAGACTCACATTCACTGGCC+AGG + Chr3:4332910-4332929 None:intergenic 55.0%
GGCGAGGTGCAATACACTTG+TGG + Chr3:4330128-4330147 None:intergenic 55.0%
TAGGGGTGGCAATGGAGGAT+GGG + Chr3:4332126-4332145 None:intergenic 55.0%
TATTGCACCTCGCCGTACAC+CGG - Chr3:4330134-4330153 MsG0380011739.01.T01:intron 55.0%
TCGGAGCCATCCGTTCAATC+CGG - Chr3:4333481-4333500 MsG0380011739.01.T01:intron 55.0%
TGAAGTAGGGGTGGCAATGG+AGG + Chr3:4332131-4332150 None:intergenic 55.0%
TGGACACGTTGCACCATCAG+AGG - Chr3:4331334-4331353 MsG0380011739.01.T01:CDS 55.0%
! CCTGTCGGATTTGGGACATG+CGG - Chr3:4333421-4333440 MsG0380011739.01.T01:intron 55.0%
! CTCGCGGCTCTTTTGCAGAT+TGG - Chr3:4329934-4329953 MsG0380011739.01.T01:intron 55.0%
AGCACTCGCTAACCGGTCCA+CGG + Chr3:4329912-4329931 None:intergenic 60.0%
CACCACCATCACGTAGCACG+AGG - Chr3:4331408-4331427 MsG0380011739.01.T01:intron 60.0%
CCCATTCAGGGGACAGGTCA+GGG - Chr3:4329757-4329776 MsG0380011739.01.T01:intron 60.0%
CCCTGACCTGTCCCCTGAAT+GGG + Chr3:4329760-4329779 None:intergenic 60.0%
CCGCATGTCCCAAATCCGAC+AGG + Chr3:4333424-4333443 None:intergenic 60.0%
CCTGACCTGTCCCCTGAATG+GGG + Chr3:4329759-4329778 None:intergenic 60.0%
CTGACCTGTCCCCTGAATGG+GGG + Chr3:4329758-4329777 None:intergenic 60.0%
GACCTCGTGCTACGTGATGG+TGG + Chr3:4331413-4331432 None:intergenic 60.0%
GCAAAGGAGTCACAGTGGGG+TGG + Chr3:4333061-4333080 None:intergenic 60.0%
GGCTATCCCAAGGAATCCCC+TGG + Chr3:4329671-4329690 None:intergenic 60.0%
GTAGGGGTGGCAATGGAGGA+TGG + Chr3:4332127-4332146 None:intergenic 60.0%
TCCCTGACCTGTCCCCTGAA+TGG + Chr3:4329761-4329780 None:intergenic 60.0%
TTCAGGGGACAGGTCAGGGA+AGG - Chr3:4329761-4329780 MsG0380011739.01.T01:intron 60.0%
!! CTCGTGCTACGTGATGGTGG+TGG + Chr3:4331410-4331429 None:intergenic 60.0%
CAAAGCTCCGGTGTACGGCG+AGG + Chr3:4330144-4330163 None:intergenic 65.0%
CCCCATTCAGGGGACAGGTC+AGG - Chr3:4329756-4329775 MsG0380011739.01.T01:intron 65.0%
GCGAGCCAGCACTCGCTAAC+CGG + Chr3:4329919-4329938 None:intergenic 65.0%
GTGGACCGGTTAGCGAGTGC+TGG - Chr3:4329911-4329930 MsG0380011739.01.T01:intron 65.0%
!! GGCGCCGGCCATATTCGAGA+AGG + Chr3:4333689-4333708 None:intergenic 65.0%
!! GGTTAGCGAGTGCTGGCTCG+CGG - Chr3:4329918-4329937 MsG0380011739.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 4328444 4336083 4328444 ID=MsG0380011739.01;Name=MsG0380011739.01
Chr3 mRNA 4328444 4336083 4328444 ID=MsG0380011739.01.T01;Parent=MsG0380011739.01;Name=MsG0380011739.01.T01;_AED=0.39;_eAED=0.39;_QI=170|0.77|0.8|1|0.88|0.8|10|0|482
Chr3 exon 4328444 4328691 4328444 ID=MsG0380011739.01.T01:exon:2169;Parent=MsG0380011739.01.T01
Chr3 exon 4330846 4331200 4330846 ID=MsG0380011739.01.T01:exon:2168;Parent=MsG0380011739.01.T01
Chr3 exon 4331316 4331402 4331316 ID=MsG0380011739.01.T01:exon:2167;Parent=MsG0380011739.01.T01
Chr3 exon 4331607 4331712 4331607 ID=MsG0380011739.01.T01:exon:2166;Parent=MsG0380011739.01.T01
Chr3 exon 4331809 4331900 4331809 ID=MsG0380011739.01.T01:exon:2165;Parent=MsG0380011739.01.T01
Chr3 exon 4332883 4332993 4332883 ID=MsG0380011739.01.T01:exon:2164;Parent=MsG0380011739.01.T01
Chr3 exon 4333172 4333306 4333172 ID=MsG0380011739.01.T01:exon:2163;Parent=MsG0380011739.01.T01
Chr3 exon 4334745 4334912 4334745 ID=MsG0380011739.01.T01:exon:2162;Parent=MsG0380011739.01.T01
Chr3 exon 4335072 4335236 4335072 ID=MsG0380011739.01.T01:exon:2161;Parent=MsG0380011739.01.T01
Chr3 exon 4335932 4336083 4335932 ID=MsG0380011739.01.T01:exon:2160;Parent=MsG0380011739.01.T01
Chr3 five_prime_UTR 4335932 4336083 4335932 ID=MsG0380011739.01.T01:five_prime_utr;Parent=MsG0380011739.01.T01
Chr3 five_prime_UTR 4335219 4335236 4335219 ID=MsG0380011739.01.T01:five_prime_utr;Parent=MsG0380011739.01.T01
Chr3 CDS 4335072 4335218 4335072 ID=MsG0380011739.01.T01:cds;Parent=MsG0380011739.01.T01
Chr3 CDS 4334745 4334912 4334745 ID=MsG0380011739.01.T01:cds;Parent=MsG0380011739.01.T01
Chr3 CDS 4333172 4333306 4333172 ID=MsG0380011739.01.T01:cds;Parent=MsG0380011739.01.T01
Chr3 CDS 4332883 4332993 4332883 ID=MsG0380011739.01.T01:cds;Parent=MsG0380011739.01.T01
Chr3 CDS 4331809 4331900 4331809 ID=MsG0380011739.01.T01:cds;Parent=MsG0380011739.01.T01
Chr3 CDS 4331607 4331712 4331607 ID=MsG0380011739.01.T01:cds;Parent=MsG0380011739.01.T01
Chr3 CDS 4331316 4331402 4331316 ID=MsG0380011739.01.T01:cds;Parent=MsG0380011739.01.T01
Chr3 CDS 4330846 4331200 4330846 ID=MsG0380011739.01.T01:cds;Parent=MsG0380011739.01.T01
Chr3 CDS 4328444 4328691 4328444 ID=MsG0380011739.01.T01:cds;Parent=MsG0380011739.01.T01
Gene Sequence

>MsG0380011739.01.T01

ATGTCTCATCGCCAAGGTGGTGATGCTGAATATTTTGCGGATGAATATGAAATGGAGGATGTAGAGGATGAAATTGATATTGATGGTGAATCTATTAATAGAGAGGGGGGCGATGCCGAGTCTGATGTAGATGAATATGATTACTCGAGTAGTAAAGCTGTAGACACTACAGCTGCTCAAGCAAGAAGAGGACAAGACATCCAGGGGATTCCTTGGGATAGCCTTAGCATCACCAGAGAAAGGTATCGGCAAACTAGGCTCGATCAATACAAGAATTATGAAAATATCCCCCATTCAGGGGACAGGTCAGGGAAGTTGAGGAATTTGGTTTGGGCTACATCAAAGCATGATGTATACCTTATGTCACAGTTCTCAGTGACACACTGGTCTTCTTTGACCTGCACAAGTTCTGAAGTACTCAATGTTTCTGGACACGTTGCACCATCAGAGAAACATCCTGGAAGTCTATTGGAGGGGTTCACACACACTCAAGTTAGCACACTTGCAGTAAAAGATAATCTTCTGGTTGCTGGAGGATTTCAGGGTGAACTTATTTGCAAGCACCTAGATCGACCTGGTGTCAGCTTTTGCTCAAGGACTACTTATGATGATAATGCTATCACCAATGCCATTGAGATTTATGACTCACCTAGTGGTGCAGTTCATTTCACAGCATCAAATAATGATTGTGGAATCAGAAACTTTGATATGGAGAAATTTCAACTTTCAAAGCATTTCCGTTTTCCCTGGCCAGTGAATCATACTTCTCTCAGTCCAGATGGTAAGCTACTTCTGATTGTTGGAGACAATCCTGAAAGTATGTTGGTTGACTCTCAAAATGGAAAGACTATTGCTCCATTATCTGGGCACTTAGATTATTCATTCGCATCATCATGGAATCCCGATGGGGTAACCTTTGCTACTGGAAACCAGGACAAAACCTGTCGGATTTGGGACATGCGGAATTTATCCAAGTCAGTGGCAGTGTTGAAGGGAAATCTCGGAGCCATCCGTTCAATCCGGCATTCTTCCGATGGCAAGTATATGGCTATAGCAGAGCCTGCAGATTTTGTGCATGTATATGACGTGAAAAGTGGGTATGAGAAAGAACAAGAAATTGATTTCTTTGGTGAGATATCAGGCATATCTTTCAGTCCAGATACCGAATCCCTTTTCATTGGGGTTTGGGATCGTACTTATGGAAGGTTTGTGTTTTTCAACTTCCAAAGAGAAAATGTAGCCAAACAAGGCTTACCTGAGCAAAATGGTGTGACACACTTTGAAGCTGGTGACAAACGTGCTAAGGAATATGTTAGCTTGCTTAAATCCAATGATCCTGTTGGTTTTAACCTTGTTGATGTTTTGGCTTGGGGTTCTTTAGGTCATATTGTTGCTTACTATATCTTGGCTACTTCTAGCAATGGTTATGATCCAAGTTTCTTTGGTTGA

Protein sequence

>MsG0380011739.01.T01

MSHRQGGDAEYFADEYEMEDVEDEIDIDGESINREGGDAESDVDEYDYSSSKAVDTTAAQARRGQDIQGIPWDSLSITRERYRQTRLDQYKNYENIPHSGDRSGKLRNLVWATSKHDVYLMSQFSVTHWSSLTCTSSEVLNVSGHVAPSEKHPGSLLEGFTHTQVSTLAVKDNLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAIEIYDSPSGAVHFTASNNDCGIRNFDMEKFQLSKHFRFPWPVNHTSLSPDGKLLLIVGDNPESMLVDSQNGKTIAPLSGHLDYSFASSWNPDGVTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRHSSDGKYMAIAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDKRAKEYVSLLKSNDPVGFNLVDVLAWGSLGHIVAYYILATSSNGYDPSFFG*