AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021339.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021339.01.T01 MTR_4g072870 87.912 91 11 0 1 91 1 91 4.91e-58 173
MsG0480021339.01.T01 MTR_4g072260 87.097 93 12 0 1 93 1 93 1.71e-57 172
MsG0480021339.01.T01 MTR_4g072220 86.022 93 13 0 1 93 1 93 5.14e-56 168
MsG0480021339.01.T01 MTR_4g072890 84.615 91 14 0 1 91 1 91 1.10e-54 164
MsG0480021339.01.T01 MTR_4g072240 80.220 91 18 0 1 91 1 91 1.80e-53 161
MsG0480021339.01.T01 MTR_4g072300 79.121 91 19 0 1 91 1 91 4.38e-52 158
MsG0480021339.01.T01 MTR_4g072370 74.725 91 20 1 1 91 1 88 3.23e-47 145
MsG0480021339.01.T01 MTR_4g072310 68.817 93 29 0 1 93 1 93 9.49e-47 144
MsG0480021339.01.T01 MTR_3g110038 74.194 93 23 1 1 93 1 92 1.28e-46 144
MsG0480021339.01.T01 MTR_4g072880 71.429 91 26 0 1 91 1 91 5.31e-46 142
MsG0480021339.01.T01 MTR_4g072580 73.626 91 18 1 1 91 1 85 1.32e-45 141
MsG0480021339.01.T01 MTR_3g084240 69.892 93 27 1 1 93 1 92 8.09e-45 140
MsG0480021339.01.T01 MTR_3g084150 68.817 93 28 1 1 93 1 92 1.28e-44 139
MsG0480021339.01.T01 MTR_3g084170 69.892 93 27 1 1 93 1 92 2.74e-44 138
MsG0480021339.01.T01 MTR_4g072500 67.742 93 29 1 1 93 1 92 2.95e-44 138
MsG0480021339.01.T01 MTR_4g072330 69.231 91 25 1 1 91 1 88 5.14e-44 137
MsG0480021339.01.T01 MTR_3g084180 67.742 93 29 1 1 93 1 92 6.30e-44 137
MsG0480021339.01.T01 MTR_4g072830 71.429 91 23 1 1 91 1 88 1.07e-43 137
MsG0480021339.01.T01 MTR_3g110032 67.742 93 30 0 1 93 1 93 2.98e-43 135
MsG0480021339.01.T01 MTR_8g461410 66.667 93 30 1 1 93 1 92 3.60e-43 135
MsG0480021339.01.T01 MTR_4g072270 66.667 93 31 0 1 93 1 93 4.52e-43 135
MsG0480021339.01.T01 MTR_3g117630 67.778 90 29 0 4 93 3 92 4.85e-43 135
MsG0480021339.01.T01 MTR_4g072230 67.742 93 28 1 1 93 1 91 5.92e-43 135
MsG0480021339.01.T01 MTR_4g072640 67.391 92 29 1 1 92 1 91 6.81e-43 135
MsG0480021339.01.T01 MTR_4g050700 67.742 93 30 0 1 93 1 93 6.94e-43 135
MsG0480021339.01.T01 MTR_2g012410 67.742 93 30 0 1 93 1 93 6.94e-43 135
MsG0480021339.01.T01 MTR_4g072530 67.033 91 29 1 1 91 1 90 1.03e-42 134
MsG0480021339.01.T01 MTR_4g072740 69.231 91 22 1 1 91 1 85 1.19e-42 134
MsG0480021339.01.T01 MTR_4g072470 70.330 91 21 1 1 91 1 85 1.55e-42 134
MsG0480021339.01.T01 MTR_4g072250 68.132 91 28 1 1 91 1 90 3.06e-42 133
MsG0480021339.01.T01 MTR_3g084220 66.667 93 30 1 1 93 1 92 8.12e-42 132
MsG0480021339.01.T01 MTR_3g084250 67.742 93 29 1 1 93 1 92 1.26e-41 132
MsG0480021339.01.T01 MTR_4g072820 72.222 90 19 2 1 90 1 84 2.27e-41 130
MsG0480021339.01.T01 MTR_4g072860 64.516 93 33 0 1 93 1 93 2.83e-41 130
MsG0480021339.01.T01 MTR_3g110042 68.889 90 27 1 1 90 1 89 3.10e-41 130
MsG0480021339.01.T01 MTR_4g072570 64.516 93 32 1 1 93 1 92 7.36e-41 130
MsG0480021339.01.T01 MTR_4g072630 67.033 91 25 1 1 91 1 86 8.58e-41 129
MsG0480021339.01.T01 MTR_4g072600 68.132 91 23 1 1 91 1 85 1.23e-40 129
MsG0480021339.01.T01 MTR_4g072730 63.736 91 32 1 1 91 1 90 1.68e-40 129
MsG0480021339.01.T01 MTR_4g072490 65.934 91 25 1 1 91 1 85 1.80e-40 129
MsG0480021339.01.T01 MTR_4g072480 63.441 93 33 1 1 93 1 92 2.69e-40 128
MsG0480021339.01.T01 MTR_3g084260 65.934 91 31 0 1 91 1 91 3.84e-40 128
MsG0480021339.01.T01 MTR_4g072850 71.277 94 26 1 1 93 1 94 4.62e-40 128
MsG0480021339.01.T01 MTR_4g072650 70.330 91 20 2 1 91 1 84 1.03e-39 127
MsG0480021339.01.T01 MTR_4g072610 65.934 91 24 1 1 91 1 84 1.79e-39 126
MsG0480021339.01.T01 MTR_4g072620 61.290 93 35 1 1 93 1 92 4.35e-39 125
MsG0480021339.01.T01 MTR_4g072680 61.290 93 35 1 1 93 1 92 7.05e-39 125
MsG0480021339.01.T01 MTR_3g084190 70.968 93 26 1 1 93 1 92 2.63e-38 123
MsG0480021339.01.T01 MTR_4g072460 60.215 93 36 1 1 93 1 92 9.59e-38 122
MsG0480021339.01.T01 MTR_4g072540 63.736 91 28 1 1 91 1 86 1.06e-37 121
MsG0480021339.01.T01 MTR_8g461420 68.817 93 28 1 1 93 1 92 1.87e-37 121
MsG0480021339.01.T01 MTR_4g072380 65.909 88 25 1 1 88 1 83 4.06e-37 120
MsG0480021339.01.T01 MTR_3g084160 67.742 93 29 1 1 93 1 92 6.53e-37 120
MsG0480021339.01.T01 MTR_4g072660 61.290 93 30 1 1 93 1 87 7.76e-37 119
MsG0480021339.01.T01 MTR_4g072280 74.667 75 19 0 1 75 1 75 8.35e-37 119
MsG0480021339.01.T01 MTR_3g084230 67.742 93 29 1 1 93 1 92 9.28e-37 119
MsG0480021339.01.T01 MTR_4g072940 67.391 92 29 1 3 93 33 124 1.47e-36 120
MsG0480021339.01.T01 MTR_3g084210 67.742 93 29 1 1 93 1 92 1.66e-36 119
MsG0480021339.01.T01 MTR_4g072670 61.538 91 30 1 1 91 1 86 2.75e-36 118
MsG0480021339.01.T01 MTR_4g072510 62.637 91 29 1 1 91 1 86 3.46e-36 117
MsG0480021339.01.T01 MTR_4g072465 60.870 92 29 2 1 91 1 86 5.67e-36 117
MsG0480021339.01.T01 MTR_4g072720 61.538 91 30 1 1 91 1 86 1.20e-35 116
MsG0480021339.01.T01 MTR_3g110045 67.033 91 29 1 3 93 62 151 3.99e-35 117
MsG0480021339.01.T01 MTR_4g072590 73.134 67 18 0 25 91 19 85 3.63e-34 112
MsG0480021339.01.T01 MTR_5g008350 67.500 80 20 1 1 80 1 74 3.64e-34 112
MsG0480021339.01.T01 MTR_4g072690 68.132 91 23 1 1 91 1 85 5.76e-34 112
MsG0480021339.01.T01 MTR_5g008370 64.634 82 25 1 10 91 13 90 7.62e-34 114
MsG0480021339.01.T01 MTR_5g008360 64.474 76 27 0 18 93 8 83 1.43e-33 111
MsG0480021339.01.T01 MTR_3g084200 69.863 73 21 1 1 73 1 72 3.63e-33 110
MsG0480021339.01.T01 MTR_4g072550 65.753 73 25 0 21 93 31 103 4.05e-32 108
MsG0480021339.01.T01 MTR_4g072910 67.164 67 22 0 25 91 34 100 2.14e-31 106
MsG0480021339.01.T01 MTR_4g072450 64.835 91 26 1 1 91 1 85 2.78e-31 105
MsG0480021339.01.T01 MTR_4g072980 53.261 92 41 2 1 90 1 92 6.06e-31 105
MsG0480021339.01.T01 MTR_4g072770 66.667 66 22 0 26 91 15 80 2.30e-30 103
MsG0480021339.01.T01 MTR_4g072290 54.839 93 28 1 1 93 1 79 2.99e-30 102
MsG0480021339.01.T01 MTR_4g072560 65.672 67 22 1 25 90 31 97 3.55e-30 103
MsG0480021339.01.T01 MTR_3g117640 65.672 67 22 1 25 90 33 99 3.88e-30 103
MsG0480021339.01.T01 MTR_4g072750 65.333 75 23 2 1 73 1 74 1.47e-29 101
MsG0480021339.01.T01 MTR_4g072930 51.765 85 37 1 11 91 26 110 1.01e-27 97.4
MsG0480021339.01.T01 MTR_3g110035 65.152 66 23 0 28 93 73 138 1.64e-25 92.4
MsG0480021339.01.T01 MTR_3g113310 48.913 92 40 3 5 90 15 105 3.94e-25 90.5
MsG0480021339.01.T01 MTR_3g117610 58.462 65 26 1 24 88 43 106 1.45e-23 87.0
MsG0480021339.01.T01 MTR_4g072190 49.383 81 37 2 10 90 23 99 1.20e-22 84.3
MsG0480021339.01.T01 MTR_6g077850 53.731 67 31 0 25 91 33 99 1.89e-22 83.6
MsG0480021339.01.T01 MTR_8g076040 48.864 88 40 3 5 88 16 102 4.11e-22 82.8
MsG0480021339.01.T01 MTR_5g021820 47.778 90 42 4 5 90 15 103 4.66e-22 82.8
MsG0480021339.01.T01 MTR_8g461400 48.387 93 21 2 1 93 1 66 7.31e-22 81.3
MsG0480021339.01.T01 MTR_4g072840 52.222 90 12 3 1 90 1 59 5.79e-20 76.3
MsG0480021339.01.T01 MTR_2g043960 50.617 81 38 2 4 83 53 132 9.77e-19 75.9
MsG0480021339.01.T01 MTR_4g124750 47.674 86 43 2 4 88 46 130 1.49e-18 75.1
MsG0480021339.01.T01 MTR_4g005310 50.725 69 33 1 19 86 55 123 4.39e-18 73.9
MsG0480021339.01.T01 MTR_1g094750 41.860 86 45 2 11 92 31 115 2.54e-16 68.6
MsG0480021339.01.T01 MTR_4g025830 45.833 72 35 2 23 91 76 146 4.93e-16 68.9
MsG0480021339.01.T01 MTR_0388s0020 37.931 87 49 3 8 91 58 142 8.50e-16 68.2
MsG0480021339.01.T01 MTR_1g009150 46.154 78 37 2 10 83 51 127 1.56e-15 68.2
MsG0480021339.01.T01 MTR_4g072160 43.662 71 39 1 16 86 27 96 3.19e-15 66.2
MsG0480021339.01.T01 MTR_3g109160 45.570 79 42 1 5 83 48 125 3.47e-15 67.0
MsG0480021339.01.T01 MTR_3g092220 44.156 77 38 3 9 83 18 91 7.69e-15 64.7
MsG0480021339.01.T01 MTR_1g024085 50.847 59 28 1 25 83 36 93 1.84e-14 64.7
MsG0480021339.01.T01 MTR_7g118010 47.619 63 30 2 26 86 23 84 2.89e-14 63.2
MsG0480021339.01.T01 MTR_4g005320 50.000 58 28 1 26 83 70 126 3.33e-14 64.3
MsG0480021339.01.T01 MTR_1g061570 51.786 56 26 1 25 80 18 72 9.17e-14 62.4
MsG0480021339.01.T01 MTR_3g097120 41.772 79 37 2 22 92 5 82 1.17e-13 61.6
MsG0480021339.01.T01 MTR_7g101740 45.312 64 34 1 25 88 39 101 1.63e-13 61.2
MsG0480021339.01.T01 MTR_8g026730 46.667 60 29 2 26 83 27 85 2.51e-13 60.8
MsG0480021339.01.T01 MTR_1g063950 41.935 62 35 1 25 86 47 107 3.10e-13 60.8
MsG0480021339.01.T01 MTR_8g461210 45.763 59 31 1 25 83 34 91 7.25e-13 59.7
MsG0480021339.01.T01 MTR_7g104950 38.158 76 41 2 15 90 44 113 3.27e-12 58.5
MsG0480021339.01.T01 MTR_1g059770 39.062 64 38 1 27 90 50 112 4.57e-12 58.2
MsG0480021339.01.T01 MTR_7g405740 45.000 60 32 1 27 86 68 126 8.30e-12 58.2
MsG0480021339.01.T01 MTR_3g105900 63.889 36 13 0 25 60 1171 1206 1.47e-11 59.3
MsG0480021339.01.T01 MTR_2g066830 43.396 53 29 1 26 78 58 109 1.55e-11 57.0
MsG0480021339.01.T01 MTR_7g104940 36.842 76 42 2 15 90 44 113 3.15e-11 55.8
MsG0480021339.01.T01 MTR_8g096440 39.241 79 45 2 7 85 28 103 3.51e-11 55.8
MsG0480021339.01.T01 MTR_3g098970 33.333 69 45 1 25 93 52 119 4.64e-11 55.8
MsG0480021339.01.T01 MTR_4g021810 41.772 79 40 3 10 83 6 83 4.90e-11 54.7
MsG0480021339.01.T01 MTR_2g095430 44.828 58 27 2 25 78 44 100 5.09e-11 55.5
MsG0480021339.01.T01 MTR_8g094980 38.272 81 36 2 25 92 2 81 5.18e-11 54.7
MsG0480021339.01.T01 MTR_8g101520 42.424 66 37 1 27 92 51 115 7.24e-11 55.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021339.01.T01 AT4G38840 62.353 85 31 1 8 91 15 99 1.43e-33 112
MsG0480021339.01.T01 AT2G21210 55.789 95 38 2 1 91 1 95 2.60e-33 111
MsG0480021339.01.T01 AT2G21210 55.789 95 38 2 1 91 68 162 1.18e-32 111
MsG0480021339.01.T01 AT5G18080 62.821 78 26 2 14 90 14 89 4.37e-31 105
MsG0480021339.01.T01 AT5G18020 60.000 75 29 1 17 90 15 89 8.68e-31 104
MsG0480021339.01.T01 AT5G18030 69.231 65 19 1 27 90 23 87 1.17e-30 103
MsG0480021339.01.T01 AT5G18010 61.333 75 28 1 17 90 15 89 2.09e-30 103
MsG0480021339.01.T01 AT4G38825 60.811 74 28 1 18 90 15 88 3.16e-30 103
MsG0480021339.01.T01 AT5G18060 67.692 65 20 1 27 90 25 89 3.32e-30 103
MsG0480021339.01.T01 AT5G18050 66.154 65 21 1 27 90 25 89 6.76e-30 102
MsG0480021339.01.T01 AT2G21200 61.111 72 27 1 20 90 15 86 3.34e-29 100
MsG0480021339.01.T01 AT4G34770 59.524 84 29 2 10 91 22 102 7.54e-29 100
MsG0480021339.01.T01 AT3G03840 62.162 74 26 1 19 90 20 93 7.68e-29 99.8
MsG0480021339.01.T01 AT3G03820 61.333 75 26 1 19 90 20 94 6.05e-28 97.4
MsG0480021339.01.T01 AT4G38850 54.651 86 26 2 8 90 13 88 7.62e-28 97.1
MsG0480021339.01.T01 AT4G34800 50.562 89 36 2 1 86 1 84 2.30e-27 95.9
MsG0480021339.01.T01 AT3G03850 63.636 66 22 1 27 90 26 91 7.95e-27 94.7
MsG0480021339.01.T01 AT4G34810 59.155 71 24 2 25 90 47 117 1.08e-26 95.1
MsG0480021339.01.T01 AT3G03830 62.687 67 22 1 27 90 25 91 2.14e-26 93.6
MsG0480021339.01.T01 AT4G13790 46.667 90 40 2 3 90 8 91 2.25e-25 90.9
MsG0480021339.01.T01 AT4G34790 60.000 65 24 1 26 88 39 103 8.21e-25 90.1
MsG0480021339.01.T01 AT4G38860 55.224 67 30 0 24 90 38 104 7.09e-24 87.4
MsG0480021339.01.T01 AT1G75580 48.936 94 39 3 5 90 15 107 1.07e-23 87.0
MsG0480021339.01.T01 AT4G34780 57.143 70 27 2 25 91 27 96 5.38e-23 85.5
MsG0480021339.01.T01 AT2G21220 46.429 84 41 2 10 90 21 103 4.10e-22 83.2
MsG0480021339.01.T01 AT4G34760 53.731 67 30 1 24 90 41 106 5.77e-22 82.8
MsG0480021339.01.T01 AT1G19830 52.778 72 33 1 19 90 41 111 1.67e-21 82.0
MsG0480021339.01.T01 AT4G36110 48.193 83 40 2 8 88 20 101 1.13e-20 79.3
MsG0480021339.01.T01 AT2G16580 45.455 88 40 2 8 88 19 105 2.02e-19 76.3
MsG0480021339.01.T01 AT3G43120 57.627 59 24 1 25 83 78 135 5.83e-19 76.6
MsG0480021339.01.T01 AT2G18010 41.489 94 44 2 5 88 17 109 1.41e-18 74.3
MsG0480021339.01.T01 AT5G20810 54.545 66 29 1 18 83 71 135 4.42e-18 74.3
MsG0480021339.01.T01 AT5G20810 54.545 66 29 1 18 83 71 135 8.54e-18 74.3
MsG0480021339.01.T01 AT5G66260 45.783 83 43 2 10 91 17 98 5.38e-17 69.7
MsG0480021339.01.T01 AT3G20220 50.769 65 30 2 26 89 47 110 8.55e-17 69.7
MsG0480021339.01.T01 AT3G51200 42.169 83 43 3 10 91 26 104 2.04e-15 65.9
MsG0480021339.01.T01 AT1G75590 47.222 72 33 2 12 83 32 98 5.88e-15 66.2
MsG0480021339.01.T01 AT2G37030 44.444 63 34 1 25 87 48 109 2.52e-14 63.5
MsG0480021339.01.T01 AT5G10990 49.153 59 29 1 25 83 40 97 5.81e-14 63.2
MsG0480021339.01.T01 AT5G53590 41.096 73 37 2 25 92 45 116 8.07e-14 62.8
MsG0480021339.01.T01 AT2G45210 39.726 73 40 2 22 91 75 146 1.10e-13 62.8
MsG0480021339.01.T01 AT1G19840 50.847 59 28 1 25 83 40 97 1.42e-13 62.4
MsG0480021339.01.T01 AT3G53250 42.857 63 32 1 25 87 51 109 2.09e-13 61.2
MsG0480021339.01.T01 AT3G53250 42.857 63 32 1 25 87 82 140 2.80e-13 61.6
MsG0480021339.01.T01 AT4G12410 44.928 69 34 2 26 91 76 143 2.88e-13 61.6
MsG0480021339.01.T01 AT3G60690 42.647 68 35 2 26 90 88 154 2.94e-13 62.0
MsG0480021339.01.T01 AT4G31320 53.448 58 26 1 21 78 75 131 3.76e-13 62.0
MsG0480021339.01.T01 AT2G46690 43.284 67 34 2 20 83 18 83 7.45e-13 59.7
MsG0480021339.01.T01 AT4G09530 44.444 63 32 2 27 86 29 91 9.90e-13 58.9
MsG0480021339.01.T01 AT4G34750 44.068 59 32 1 25 83 36 93 1.67e-12 59.7
MsG0480021339.01.T01 AT4G34750 44.068 59 32 1 25 83 36 93 1.67e-12 59.7
MsG0480021339.01.T01 AT2G24400 51.724 58 27 1 26 83 64 120 1.72e-12 60.1
MsG0480021339.01.T01 AT4G00880 50.820 61 27 2 25 83 27 86 2.03e-12 58.9
MsG0480021339.01.T01 AT3G61900 45.161 62 30 2 25 83 29 89 2.55e-12 58.9
MsG0480021339.01.T01 AT3G12830 41.558 77 37 3 2 78 33 101 5.48e-12 57.8
MsG0480021339.01.T01 AT4G22620 40.580 69 37 2 26 91 79 146 1.30e-11 57.4
MsG0480021339.01.T01 AT1G56150 45.283 53 28 1 26 78 38 89 9.31e-11 54.3

Find 26 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGTAGATCCTTGACTTT+TGG 0.217878 4:-56884963 None:intergenic
AATCAAGCAGAAGAAGAATT+TGG 0.271748 4:+56885094 MsG0480021339.01.T01:CDS
GGCTGGCTCAAATATGATAC+TGG 0.405573 4:-56885052 None:intergenic
GCTATCTCGCAGTCTATGTT+GGG 0.411455 4:+56885005 MsG0480021339.01.T01:CDS
TAGACTGCGAGATAGCCTTT+TGG 0.419843 4:-56884998 None:intergenic
GGCTATCTCGCAGTCTATGT+TGG 0.430815 4:+56885004 MsG0480021339.01.T01:CDS
TGATGCCCTTCTGATAATAC+CGG 0.494694 4:-56884936 None:intergenic
GTAATTCTTGAAACGATGGC+TGG 0.519820 4:-56885069 None:intergenic
AAGGGATTTGAAATCCCAAA+AGG 0.535913 4:+56884983 MsG0480021339.01.T01:CDS
TTTGGATATGATCATCCAAT+GGG 0.541874 4:+56885112 MsG0480021339.01.T01:CDS
TAAGAAAGCATCTTCACCAC+AGG 0.546132 4:-56885149 None:intergenic
AGAATGGGTTTCCGCATAGC+CGG 0.550842 4:+56884917 None:intergenic
ATTTGGATATGATCATCCAA+TGG 0.556875 4:+56885111 MsG0480021339.01.T01:CDS
GCATAGCCGGTATTATCAGA+AGG 0.557519 4:+56884930 MsG0480021339.01.T01:CDS
TTTAGTAATTCTTGAAACGA+TGG 0.570741 4:-56885073 None:intergenic
TCTATGTTGGGGATAGAATG+AGG 0.610108 4:+56885017 MsG0480021339.01.T01:CDS
CATAGCCGGTATTATCAGAA+GGG 0.617875 4:+56884931 MsG0480021339.01.T01:CDS
GGAATTGTAAGACCACCCAT+TGG 0.622173 4:-56885127 None:intergenic
CAAAAGTCAAGGATCTACGA+AGG 0.622177 4:+56884964 MsG0480021339.01.T01:CDS
AAAAGTCAAGGATCTACGAA+GGG 0.626592 4:+56884965 MsG0480021339.01.T01:CDS
GGATATGATCATCCAATGGG+TGG 0.655640 4:+56885115 MsG0480021339.01.T01:CDS
TTCTGATAATACCGGCTATG+CGG 0.657282 4:-56884928 None:intergenic
CTATCTCGCAGTCTATGTTG+GGG 0.659496 4:+56885006 MsG0480021339.01.T01:CDS
AAGAAAGCATCTTCACCACA+GGG 0.704444 4:-56885148 None:intergenic
ATGTTGGGGATAGAATGAGG+CGG 0.757349 4:+56885020 MsG0480021339.01.T01:CDS
GGTGGTCTTACAATTCCCTG+TGG 0.782085 4:+56885133 MsG0480021339.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TTTAGTAATTCTTGAAACGA+TGG - Chr4:56885076-56885095 None:intergenic 25.0%
AATCAAGCAGAAGAAGAATT+TGG + Chr4:56885094-56885113 MsG0480021339.01.T01:CDS 30.0%
ATTTGGATATGATCATCCAA+TGG + Chr4:56885111-56885130 MsG0480021339.01.T01:CDS 30.0%
TTTGGATATGATCATCCAAT+GGG + Chr4:56885112-56885131 MsG0480021339.01.T01:CDS 30.0%
AAAAGTCAAGGATCTACGAA+GGG + Chr4:56884965-56884984 MsG0480021339.01.T01:CDS 35.0%
! AAGGGATTTGAAATCCCAAA+AGG + Chr4:56884983-56885002 MsG0480021339.01.T01:CDS 35.0%
! GCATCATTTTCCAAAAGTCA+AGG + Chr4:56884953-56884972 MsG0480021339.01.T01:CDS 35.0%
CAAAAGTCAAGGATCTACGA+AGG + Chr4:56884964-56884983 MsG0480021339.01.T01:CDS 40.0%
CATAGCCGGTATTATCAGAA+GGG + Chr4:56884931-56884950 MsG0480021339.01.T01:CDS 40.0%
GTAATTCTTGAAACGATGGC+TGG - Chr4:56885072-56885091 None:intergenic 40.0%
TCTATGTTGGGGATAGAATG+AGG + Chr4:56885017-56885036 MsG0480021339.01.T01:CDS 40.0%
TGATGCCCTTCTGATAATAC+CGG - Chr4:56884939-56884958 None:intergenic 40.0%
! CTTCGTAGATCCTTGACTTT+TGG - Chr4:56884966-56884985 None:intergenic 40.0%
! TTCTGATAATACCGGCTATG+CGG - Chr4:56884931-56884950 None:intergenic 40.0%
!! AAGAAAGCATCTTCACCACA+GGG - Chr4:56885151-56885170 None:intergenic 40.0%
!! TAAGAAAGCATCTTCACCAC+AGG - Chr4:56885152-56885171 None:intergenic 40.0%
ATGTTGGGGATAGAATGAGG+CGG + Chr4:56885020-56885039 MsG0480021339.01.T01:CDS 45.0%
CTATCTCGCAGTCTATGTTG+GGG + Chr4:56885006-56885025 MsG0480021339.01.T01:CDS 45.0%
GCATAGCCGGTATTATCAGA+AGG + Chr4:56884930-56884949 MsG0480021339.01.T01:CDS 45.0%
GCTATCTCGCAGTCTATGTT+GGG + Chr4:56885005-56885024 MsG0480021339.01.T01:CDS 45.0%
GGAATTGTAAGACCACCCAT+TGG - Chr4:56885130-56885149 None:intergenic 45.0%
GGATATGATCATCCAATGGG+TGG + Chr4:56885115-56885134 MsG0480021339.01.T01:CDS 45.0%
! AGACTGCGAGATAGCCTTTT+GGG - Chr4:56885000-56885019 None:intergenic 45.0%
! GGCTGGCTCAAATATGATAC+TGG - Chr4:56885055-56885074 None:intergenic 45.0%
! TAGACTGCGAGATAGCCTTT+TGG - Chr4:56885001-56885020 None:intergenic 45.0%
GGCTATCTCGCAGTCTATGT+TGG + Chr4:56885004-56885023 MsG0480021339.01.T01:CDS 50.0%
! GGTGGTCTTACAATTCCCTG+TGG + Chr4:56885133-56885152 MsG0480021339.01.T01:CDS 50.0%
Chromosome Type Strat End Strand Name
Chr4 gene 56884920 56885201 56884920 ID=MsG0480021339.01;Name=MsG0480021339.01
Chr4 mRNA 56884920 56885201 56884920 ID=MsG0480021339.01.T01;Parent=MsG0480021339.01;Name=MsG0480021339.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|93
Chr4 exon 56884920 56885201 56884920 ID=MsG0480021339.01.T01:exon:7119;Parent=MsG0480021339.01.T01
Chr4 CDS 56884920 56885201 56884920 ID=MsG0480021339.01.T01:cds;Parent=MsG0480021339.01.T01
Gene Sequence

>MsG0480021339.01.T01

ATGGGTTTCCGCATAGCCGGTATTATCAGAAGGGCATCATTTTCCAAAAGTCAAGGATCTACGAAGGGATTTGAAATCCCAAAAGGCTATCTCGCAGTCTATGTTGGGGATAGAATGAGGCGGTTCGTGATTCCAGTATCATATTTGAGCCAGCCATCGTTTCAAGAATTACTAAATCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTTACAATTCCCTGTGGTGAAGATGCTTTCTTACAACTCACTTCTCGCTTAAGTGAGTTGTAA

Protein sequence

>MsG0480021339.01.T01

MGFRIAGIIRRASFSKSQGSTKGFEIPKGYLAVYVGDRMRRFVIPVSYLSQPSFQELLNQAEEEFGYDHPMGGLTIPCGEDAFLQLTSRLSEL*