AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012527.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012527.01.T01 MTR_3g026400 65.686 102 19 1 42 143 8 93 4.25e-33 122
MsG0380012527.01.T01 MTR_6g078380 44.186 86 32 2 58 143 54 123 1.97e-14 70.1
MsG0380012527.01.T01 MTR_4g083000 34.483 116 53 5 40 150 24 121 1.45e-13 67.4
MsG0380012527.01.T01 MTR_6g078450 40.698 86 35 2 58 143 54 123 3.98e-13 66.2
MsG0380012527.01.T01 MTR_6g078450 40.698 86 35 2 58 143 54 123 4.28e-13 66.2
MsG0380012527.01.T01 MTR_3g028720 40.698 86 35 1 58 143 56 125 2.83e-12 63.9
MsG0380012527.01.T01 MTR_3g028720 40.698 86 35 1 58 143 56 125 3.25e-12 63.5
MsG0380012527.01.T01 MTR_3g028720 40.698 86 35 1 58 143 56 125 3.33e-12 63.5
MsG0380012527.01.T01 MTR_3g028720 40.698 86 35 1 58 143 56 125 3.37e-12 63.5
MsG0380012527.01.T02 MTR_3g026400 79.283 251 22 2 4 224 123 373 3.93e-142 402
MsG0380012527.01.T02 MTR_3g026400 78.571 252 24 2 4 225 92 343 8.10e-139 398
MsG0380012527.01.T02 MTR_3g026400 78.571 252 24 2 4 225 123 374 1.05e-138 399
MsG0380012527.01.T02 MTR_3g026620 67.871 249 50 2 4 222 124 372 2.37e-110 327
MsG0380012527.01.T02 MTR_2g098540 52.209 249 85 5 8 223 79 326 1.87e-82 254
MsG0380012527.01.T02 MTR_2g098540 51.953 256 86 6 8 230 123 374 4.81e-82 254
MsG0380012527.01.T02 MTR_4g066240 52.340 235 80 5 9 211 129 363 7.13e-81 248
MsG0380012527.01.T02 MTR_4g067040 50.196 255 90 6 9 230 127 377 1.83e-80 246
MsG0380012527.01.T02 MTR_4g066630 52.479 242 81 5 9 217 132 372 2.63e-80 246
MsG0380012527.01.T02 MTR_4g067040 50.196 255 90 6 9 230 127 377 3.93e-80 246
MsG0380012527.01.T02 MTR_4g066240 52.340 235 80 5 9 211 129 363 5.04e-80 249
MsG0380012527.01.T02 MTR_4g066240 52.340 235 80 5 9 211 129 363 5.40e-80 249
MsG0380012527.01.T02 MTR_2g098520 52.282 241 83 4 9 217 127 367 1.17e-79 248
MsG0380012527.01.T02 MTR_3g026280 50.877 228 81 3 8 204 114 341 1.46e-79 247
MsG0380012527.01.T02 MTR_2g098790 50.980 255 88 7 9 230 131 381 1.73e-79 248
MsG0380012527.01.T02 MTR_4g066630 52.479 242 81 5 9 217 132 372 2.59e-79 245
MsG0380012527.01.T02 MTR_4g066630 52.479 242 81 5 9 217 132 372 3.96e-79 245
MsG0380012527.01.T02 MTR_4g066590 50.196 255 90 6 9 230 126 376 6.85e-79 246
MsG0380012527.01.T02 MTR_6g078450 48.996 249 93 5 9 224 129 376 1.11e-78 244
MsG0380012527.01.T02 MTR_6g078380 52.766 235 79 5 9 212 129 362 1.36e-78 245
MsG0380012527.01.T02 MTR_4g066630 52.479 242 81 5 9 217 132 372 2.96e-78 244
MsG0380012527.01.T02 MTR_4g066210 53.043 230 76 3 9 207 136 364 4.58e-78 244
MsG0380012527.01.T02 MTR_6g078450 48.996 249 93 5 9 224 129 376 9.88e-78 243
MsG0380012527.01.T02 MTR_4g066580 50.826 242 85 5 9 217 132 372 1.38e-77 240
MsG0380012527.01.T02 MTR_4g066340 51.948 231 79 4 9 208 56 285 2.49e-77 240
MsG0380012527.01.T02 MTR_3g028720 51.240 242 84 5 9 217 131 371 3.46e-77 238
MsG0380012527.01.T02 MTR_3g028720 51.240 242 84 5 9 217 131 371 7.90e-77 238
MsG0380012527.01.T02 MTR_6g078330 50.413 242 88 4 1 211 18 258 8.14e-77 238
MsG0380012527.01.T02 MTR_4g066580 50.826 242 85 5 9 217 132 372 1.59e-76 240
MsG0380012527.01.T02 MTR_3g028720 51.240 242 84 5 9 217 131 371 1.96e-76 238
MsG0380012527.01.T02 MTR_4g023000 47.036 253 101 3 8 230 116 365 3.80e-76 238
MsG0380012527.01.T02 MTR_6g078330 51.502 233 81 4 10 211 131 362 4.83e-76 235
MsG0380012527.01.T02 MTR_4g066640 48.988 247 92 4 9 223 132 376 8.17e-76 234
MsG0380012527.01.T02 MTR_3g028720 51.240 242 84 5 9 217 131 371 1.46e-75 238
MsG0380012527.01.T02 MTR_6g078330 51.502 233 81 4 10 211 27 258 1.59e-75 234
MsG0380012527.01.T02 MTR_6g078330 51.502 233 81 4 10 211 131 362 1.97e-74 234
MsG0380012527.01.T02 MTR_0110s0040 50.877 228 82 2 4 201 128 355 4.56e-74 230
MsG0380012527.01.T02 MTR_4g066640 48.988 247 92 4 9 223 132 376 4.66e-74 233
MsG0380012527.01.T02 MTR_0110s0030 50.877 228 82 2 4 201 128 355 4.71e-73 231
MsG0380012527.01.T02 MTR_0110s0040 50.877 228 82 2 4 201 128 355 8.04e-73 230
MsG0380012527.01.T02 MTR_7g068900 45.344 247 102 5 6 219 42 288 1.24e-72 229
MsG0380012527.01.T02 MTR_4g083000 46.154 234 95 3 4 206 19 252 2.11e-72 226
MsG0380012527.01.T02 MTR_4g083000 46.154 234 95 3 4 206 113 346 1.12e-71 227
MsG0380012527.01.T02 MTR_4g016920 42.629 251 111 4 6 223 21 271 1.11e-70 219
MsG0380012527.01.T02 MTR_7g068910 44.622 251 106 5 6 223 118 368 7.59e-70 223
MsG0380012527.01.T02 MTR_7g068910 44.622 251 106 5 6 223 128 378 9.51e-70 223
MsG0380012527.01.T02 MTR_5g044000 44.841 252 105 4 4 221 131 382 1.12e-69 222
MsG0380012527.01.T02 MTR_4g016920 42.629 251 111 4 6 223 21 271 1.70e-69 219
MsG0380012527.01.T02 MTR_4g016920 42.629 251 111 4 6 223 114 364 1.37e-68 219
MsG0380012527.01.T02 MTR_5g071520 45.802 262 100 4 9 230 132 391 4.43e-66 213
MsG0380012527.01.T02 MTR_1g088630 45.575 226 113 4 7 222 113 338 5.43e-65 206
MsG0380012527.01.T02 MTR_1g088630 45.575 226 113 4 7 222 81 306 5.99e-64 206
MsG0380012527.01.T02 MTR_4g081530 43.882 237 100 4 4 208 109 344 3.49e-62 202
MsG0380012527.01.T02 MTR_4g066330 42.231 251 90 3 10 230 135 360 1.65e-61 200
MsG0380012527.01.T02 MTR_2g079580 42.035 226 101 1 9 204 123 348 4.40e-60 194
MsG0380012527.01.T02 MTR_4g066280 40.873 252 94 3 9 230 134 360 2.77e-59 194
MsG0380012527.01.T02 MTR_5g068740 43.946 223 93 3 7 197 113 335 2.78e-59 195
MsG0380012527.01.T02 MTR_2g079580 42.035 226 101 1 9 204 123 348 5.04e-59 195
MsG0380012527.01.T02 MTR_0110s0020 60.993 141 55 0 4 144 128 268 6.96e-59 189
MsG0380012527.01.T02 MTR_2g079550 41.778 225 101 1 9 203 121 345 8.03e-58 191
MsG0380012527.01.T02 MTR_4g131810 43.612 227 96 3 9 203 120 346 1.70e-57 191
MsG0380012527.01.T02 MTR_2g022760 42.478 226 100 1 9 204 25 250 2.66e-57 187
MsG0380012527.01.T02 MTR_1g088610 40.400 250 115 5 7 222 113 362 1.28e-56 191
MsG0380012527.01.T02 MTR_2g022760 42.478 226 100 1 9 204 128 353 2.36e-56 187
MsG0380012527.01.T02 MTR_3g033810 37.945 253 116 4 11 233 114 355 5.19e-56 186
MsG0380012527.01.T02 MTR_2g022710 42.667 225 99 2 9 203 25 249 5.90e-56 184
MsG0380012527.01.T02 MTR_2g022710 42.667 225 99 2 9 203 126 350 6.61e-56 184
MsG0380012527.01.T02 MTR_2g022710 42.667 225 99 2 9 203 126 350 8.64e-56 184
MsG0380012527.01.T02 MTR_2g022710 42.667 225 99 2 9 203 126 350 9.14e-56 184
MsG0380012527.01.T02 MTR_2g022710 42.667 225 99 2 9 203 126 350 1.40e-55 184
MsG0380012527.01.T02 MTR_2g022710 42.667 225 99 2 9 203 126 350 2.00e-55 184
MsG0380012527.01.T02 MTR_2g022710 42.667 225 99 2 9 203 126 350 6.39e-55 184
MsG0380012527.01.T02 MTR_3g033790 40.639 219 91 3 11 199 112 321 8.87e-55 182
MsG0380012527.01.T02 MTR_4g131800 41.778 225 101 1 9 203 607 831 9.33e-55 189
MsG0380012527.01.T02 MTR_1g088630 50.617 162 72 3 7 164 113 270 2.48e-52 171
MsG0380012527.01.T02 MTR_4g015460 42.035 226 78 4 10 206 135 336 9.47e-52 175
MsG0380012527.01.T02 MTR_4g015420 42.291 227 76 5 9 205 157 358 1.50e-51 175
MsG0380012527.01.T02 MTR_7g033860 38.153 249 114 6 8 223 140 381 9.73e-49 167
MsG0380012527.01.T02 MTR_2g043200 39.044 251 92 5 9 223 157 382 2.36e-48 166
MsG0380012527.01.T02 MTR_0108s0030 36.992 246 118 3 8 221 95 335 6.27e-48 164
MsG0380012527.01.T02 MTR_7g051610 38.800 250 114 3 8 225 160 402 3.99e-42 150
MsG0380012527.01.T02 MTR_7g051510 36.694 248 122 3 8 225 160 402 4.44e-39 142
MsG0380012527.01.T02 MTR_7g051650 40.708 226 99 5 8 203 160 380 1.02e-38 141
MsG0380012527.01.T02 MTR_7g051650 40.708 226 99 5 8 203 156 376 1.04e-38 140
MsG0380012527.01.T02 MTR_7g056747 40.086 232 93 5 8 203 39 260 3.25e-38 137
MsG0380012527.01.T02 MTR_8g038650 49.153 59 29 1 155 213 101 158 6.84e-12 62.0
MsG0380012527.01.T02 MTR_4g122980 26.991 226 154 6 8 229 214 432 1.43e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012527.01.T01 AT5G42260 40.816 98 28 3 58 148 49 123 3.13e-13 66.6
MsG0380012527.01.T01 AT1G26560 38.298 94 39 4 58 150 50 125 5.06e-13 66.2
MsG0380012527.01.T01 AT3G18080 41.053 95 37 4 58 151 57 133 6.70e-13 65.9
MsG0380012527.01.T01 AT5G54570 35.398 113 53 3 42 150 28 124 1.12e-12 65.1
MsG0380012527.01.T01 AT1G02850 36.792 106 44 2 43 144 25 111 1.15e-12 65.1
MsG0380012527.01.T01 AT5G54570 35.398 113 53 3 42 150 28 124 1.20e-12 65.1
MsG0380012527.01.T01 AT1G02850 36.792 106 44 2 43 144 25 111 1.27e-12 64.7
MsG0380012527.01.T01 AT1G02850 36.792 106 44 2 43 144 25 111 3.64e-12 63.5
MsG0380012527.01.T01 AT1G02850 36.792 106 44 2 43 144 25 111 4.91e-12 63.2
MsG0380012527.01.T01 AT1G02850 36.792 106 44 2 43 144 25 111 4.96e-12 63.2
MsG0380012527.01.T02 AT2G44480 52.889 225 76 2 9 203 26 250 7.03e-81 248
MsG0380012527.01.T02 AT2G44480 52.889 225 76 2 9 203 128 352 4.23e-80 249
MsG0380012527.01.T02 AT2G44480 52.889 225 76 2 9 203 159 383 1.07e-79 249
MsG0380012527.01.T02 AT2G44480 52.995 217 71 3 9 195 159 374 4.40e-74 230
MsG0380012527.01.T02 AT2G44450 46.154 247 102 3 8 223 123 369 3.29e-72 228
MsG0380012527.01.T02 AT3G18080 45.528 246 102 3 4 217 124 369 5.62e-71 225
MsG0380012527.01.T02 AT2G25630 44.758 248 105 4 8 223 122 369 6.63e-71 224
MsG0380012527.01.T02 AT5G42260 45.565 248 103 4 8 223 123 370 1.16e-70 224
MsG0380012527.01.T02 AT5G26000 46.825 252 100 5 10 227 130 381 4.72e-70 221
MsG0380012527.01.T02 AT5G44640 44.758 248 105 4 8 223 123 370 9.17e-70 222
MsG0380012527.01.T02 AT5G26000 46.825 252 100 5 10 227 130 381 2.14e-69 222
MsG0380012527.01.T02 AT5G25980 46.552 232 94 2 10 211 142 373 5.17e-69 219
MsG0380012527.01.T02 AT5G25980 46.552 232 94 2 10 211 142 373 5.17e-69 219
MsG0380012527.01.T02 AT5G25980 46.552 232 94 2 10 211 142 373 2.73e-68 219
MsG0380012527.01.T02 AT1G02850 45.532 235 119 4 7 235 112 343 5.63e-68 216
MsG0380012527.01.T02 AT3G60130 46.862 239 93 5 8 212 70 308 6.54e-68 216
MsG0380012527.01.T02 AT3G60130 46.862 239 93 5 8 212 70 308 9.42e-68 216
MsG0380012527.01.T02 AT1G26560 44.872 234 98 3 4 206 117 350 1.34e-67 217
MsG0380012527.01.T02 AT3G60130 46.862 239 93 5 8 212 122 360 3.15e-67 216
MsG0380012527.01.T02 AT1G47600 43.478 253 105 5 9 230 135 380 3.07e-66 213
MsG0380012527.01.T02 AT1G47600 43.478 253 105 5 9 230 135 380 3.53e-66 213
MsG0380012527.01.T02 AT1G51470 43.529 255 106 5 9 232 135 382 5.64e-66 213
MsG0380012527.01.T02 AT2G32860 45.059 253 105 4 1 219 179 431 3.85e-65 213
MsG0380012527.01.T02 AT5G54570 44.726 237 98 4 4 208 19 254 6.09e-65 208
MsG0380012527.01.T02 AT3G03640 44.681 235 97 2 10 211 128 362 7.37e-65 210
MsG0380012527.01.T02 AT5G54570 44.726 237 98 4 4 208 116 351 8.34e-65 208
MsG0380012527.01.T02 AT2G32860 43.629 259 113 3 1 226 179 437 1.29e-64 211
MsG0380012527.01.T02 AT1G02850 41.221 262 118 5 7 235 112 370 1.54e-64 208
MsG0380012527.01.T02 AT5G54570 44.726 237 98 4 4 208 116 351 4.62e-64 208
MsG0380012527.01.T02 AT5G24550 39.147 258 125 3 10 235 125 382 4.15e-63 206
MsG0380012527.01.T02 AT1G60270 41.339 254 116 3 8 228 23 276 5.85e-63 198
MsG0380012527.01.T02 AT1G45191 40.840 262 114 3 5 236 111 361 1.14e-62 201
MsG0380012527.01.T02 AT1G66280 43.348 233 100 3 1 202 120 351 1.40e-62 204
MsG0380012527.01.T02 AT1G75940 41.975 243 106 3 10 217 130 372 1.48e-62 204
MsG0380012527.01.T02 AT3G18070 41.667 252 109 5 4 221 115 362 1.78e-62 200
MsG0380012527.01.T02 AT3G60120 46.460 226 90 4 10 204 107 332 1.98e-62 204
MsG0380012527.01.T02 AT4G22100 42.000 250 112 3 7 223 106 355 3.16e-62 202
MsG0380012527.01.T02 AT1G45191 44.889 225 94 2 5 199 111 335 5.82e-62 199
MsG0380012527.01.T02 AT1G66270 43.348 233 100 3 1 202 120 351 5.93e-62 202
MsG0380012527.01.T02 AT1G45191 41.221 262 113 4 5 236 111 361 6.43e-62 202
MsG0380012527.01.T02 AT1G60270 41.339 254 116 3 8 228 110 363 9.26e-62 198
MsG0380012527.01.T02 AT2G44470 43.590 234 100 3 1 202 113 346 1.55e-61 198
MsG0380012527.01.T02 AT1G45191 44.889 225 94 2 5 199 111 335 1.99e-61 201
MsG0380012527.01.T02 AT1G45191 44.889 225 94 2 5 199 111 335 2.96e-61 200
MsG0380012527.01.T02 AT2G44470 43.590 234 100 3 1 202 113 346 4.11e-61 198
MsG0380012527.01.T02 AT3G18070 41.667 252 109 5 4 221 115 362 4.46e-61 199
MsG0380012527.01.T02 AT1G45191 44.889 225 94 2 5 199 123 347 4.66e-61 200
MsG0380012527.01.T02 AT1G02850 38.246 285 117 5 7 235 112 393 5.16e-61 197
MsG0380012527.01.T02 AT3G09260 42.918 233 102 3 1 202 119 351 5.32e-61 200
MsG0380012527.01.T02 AT3G18070 41.270 252 104 5 4 221 115 356 7.35e-61 199
MsG0380012527.01.T02 AT1G61820 43.363 226 97 3 9 203 122 347 9.20e-61 199
MsG0380012527.01.T02 AT1G60090 41.434 251 114 3 7 224 108 358 1.19e-60 199
MsG0380012527.01.T02 AT3G21370 39.062 256 111 3 10 233 126 368 2.15e-60 198
MsG0380012527.01.T02 AT1G60090 44.344 221 93 2 7 197 108 328 2.36e-60 197
MsG0380012527.01.T02 AT1G02850 38.246 285 117 5 7 235 112 393 2.82e-60 198
MsG0380012527.01.T02 AT1G02850 38.246 285 117 5 7 235 112 393 3.24e-60 197
MsG0380012527.01.T02 AT1G52400 40.833 240 110 2 10 217 132 371 5.07e-60 196
MsG0380012527.01.T02 AT2G44470 43.590 234 100 3 1 202 113 346 8.64e-60 198
MsG0380012527.01.T02 AT3G60140 42.308 234 103 3 1 202 110 343 1.87e-59 194
MsG0380012527.01.T02 AT2G44450 44.954 218 89 3 37 223 1 218 2.01e-59 191
MsG0380012527.01.T02 AT1G52400 40.833 240 110 2 10 217 132 371 2.32e-59 196
MsG0380012527.01.T02 AT1G52400 40.833 240 110 2 10 217 132 371 2.32e-59 196
MsG0380012527.01.T02 AT2G44490 42.128 235 105 3 1 204 99 333 5.02e-59 195
MsG0380012527.01.T02 AT1G66270 42.918 233 99 4 1 202 120 349 6.59e-59 194
MsG0380012527.01.T02 AT4G27830 42.731 227 97 5 7 201 22 247 9.43e-59 191
MsG0380012527.01.T02 AT3G60140 42.308 234 103 3 1 202 110 343 1.17e-58 195
MsG0380012527.01.T02 AT4G27830 42.731 227 97 5 7 201 110 335 4.28e-58 192
MsG0380012527.01.T02 AT5G48375 45.249 221 74 3 12 202 118 321 2.91e-57 188
MsG0380012527.01.T02 AT5G24540 44.196 224 93 3 10 201 125 348 1.47e-56 186
MsG0380012527.01.T02 AT5G28510 39.764 254 116 4 1 217 123 376 1.59e-56 188
MsG0380012527.01.T02 AT4G27820 41.631 233 103 4 7 207 22 253 2.15e-56 185
MsG0380012527.01.T02 AT4G27820 41.631 233 103 4 7 207 22 253 2.15e-56 185
MsG0380012527.01.T02 AT1G61810 42.035 226 100 3 9 203 125 350 5.30e-56 184
MsG0380012527.01.T02 AT4G21760 43.111 225 98 2 9 203 145 369 6.29e-56 187
MsG0380012527.01.T02 AT4G21760 43.111 225 98 2 9 203 145 369 6.99e-56 187
MsG0380012527.01.T02 AT1G61810 42.035 226 100 3 9 203 25 250 7.26e-56 184
MsG0380012527.01.T02 AT4G27820 41.631 233 103 4 7 207 107 338 9.84e-56 186
MsG0380012527.01.T02 AT5G24540 44.000 225 94 3 10 202 125 349 1.17e-55 186
MsG0380012527.01.T02 AT1G61810 42.035 226 100 3 9 203 125 350 4.20e-55 185
MsG0380012527.01.T02 AT1G61810 42.035 226 100 3 9 203 125 350 4.74e-55 184
MsG0380012527.01.T02 AT1G61820 43.415 205 85 3 30 203 4 208 1.88e-54 179
MsG0380012527.01.T02 AT2G44460 42.241 232 103 2 1 201 113 344 7.05e-53 179
MsG0380012527.01.T02 AT3G62750 37.450 251 114 5 7 222 107 349 5.70e-52 172
MsG0380012527.01.T02 AT3G62750 37.450 251 114 5 7 222 107 349 5.70e-52 172
MsG0380012527.01.T02 AT3G62750 37.450 251 114 5 7 222 22 264 1.81e-51 172
MsG0380012527.01.T02 AT3G62750 37.450 251 114 5 7 222 22 264 1.81e-51 172
MsG0380012527.01.T02 AT1G51490 42.731 227 97 6 9 207 110 331 2.86e-51 172
MsG0380012527.01.T02 AT3G62750 37.450 251 114 5 7 222 133 375 5.90e-51 171
MsG0380012527.01.T02 AT3G62750 37.450 251 114 5 7 222 133 375 1.06e-50 171
MsG0380012527.01.T02 AT3G62750 37.450 251 114 5 7 222 107 349 1.11e-50 172
MsG0380012527.01.T02 AT5G36890 35.878 262 125 6 4 233 101 351 1.36e-50 172
MsG0380012527.01.T02 AT3G62750 37.450 251 114 5 7 222 133 375 1.41e-50 172
MsG0380012527.01.T02 AT5G36890 35.878 262 125 6 4 233 101 351 1.47e-50 172
MsG0380012527.01.T02 AT1G61810 49.032 155 74 1 9 158 125 279 7.83e-48 160
MsG0380012527.01.T02 AT3G62740 38.667 225 105 4 7 201 108 329 2.09e-47 162
MsG0380012527.01.T02 AT3G62740 38.667 225 105 4 7 201 108 329 7.91e-47 162
MsG0380012527.01.T02 AT3G18070 41.237 194 78 4 62 221 94 285 1.58e-43 150
MsG0380012527.01.T02 AT2G44460 41.709 199 85 2 35 202 1 199 3.43e-43 151
MsG0380012527.01.T02 AT3G18070 41.237 194 78 4 62 221 94 285 7.90e-43 150
MsG0380012527.01.T02 AT2G44480 46.207 145 48 2 89 203 2 146 2.89e-36 130
MsG0380012527.01.T02 AT3G18070 40.000 175 69 4 81 221 1 173 6.48e-36 127
MsG0380012527.01.T02 AT3G18070 40.000 175 69 4 81 221 1 173 2.90e-35 127
MsG0380012527.01.T02 AT5G16580 37.811 201 87 5 62 228 27 223 1.47e-29 112
MsG0380012527.01.T02 AT3G06510 29.437 231 142 9 8 229 191 409 6.65e-12 65.1

Find 77 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGAAAATATCAGGTAAT+TGG 0.229768 3:-19198684 MsG0380012527.01.T01:intron
CCAGTGTACATTACTGAAAA+TGG 0.258317 3:-19196817 MsG0380012527.01.T01:intron
CTCAAGGTGGTGAAAGAAAT+TGG 0.260524 3:-19199932 MsG0380012527.01.T01:CDS
TTGGTTGAGCAGATAAGATT+TGG 0.275910 3:-19200118 MsG0380012527.01.T01:CDS
ATGGGAGGGGACCAAGTATA+TGG 0.281964 3:-19200455 MsG0380012527.01.T01:CDS
TCATGATTTCTCTTTGGAAT+TGG 0.285761 3:-19201352 MsG0380012527.01.T01:CDS
CAATAGTGTTGCTGATAAAA+AGG 0.286184 3:-19198009 MsG0380012527.01.T01:three_prime_UTR
AAGAGAAATCATGAGGAAAA+AGG 0.293143 3:+19201361 None:intergenic
TCAGCAACACTATTGGAATA+TGG 0.298995 3:+19198017 None:intergenic
AGATGTCACTACTTCATCTT+TGG 0.306241 3:-19201518 MsG0380012527.01.T01:five_prime_UTR
CCATTGATGGTGTATGAATA+AGG 0.315978 3:+19198843 None:intergenic
AATTAAATTTCTCTCTATCT+TGG 0.322934 3:-19200137 MsG0380012527.01.T01:CDS
GAAGGAGCTTCAGATATAGA+TGG 0.339718 3:-19200474 MsG0380012527.01.T01:CDS
GCTTCAAGACATTTGGAGAT+AGG 0.339805 3:-19198893 MsG0380012527.01.T01:three_prime_UTR
GATATCTTTGTTATCTTACT+TGG 0.343555 3:+19199866 None:intergenic
TACACCATCAATGGATATAA+TGG 0.360639 3:-19198834 MsG0380012527.01.T01:three_prime_UTR
GGAATTGGCTTCTGCTTACC+AGG 0.391887 3:-19201337 MsG0380012527.01.T01:intron
AGTATACAAGAGAAAATATC+AGG 0.393019 3:-19198691 MsG0380012527.01.T01:intron
GTTATAGAATTTCACTCCTA+AGG 0.398406 3:+19199364 None:intergenic
GTCAATATGCTTCATTCAAT+AGG 0.402198 3:-19201386 MsG0380012527.01.T01:exon
TGGAGATAGGGTTAAGCATT+GGG 0.413839 3:-19198880 MsG0380012527.01.T01:three_prime_UTR
CTTCAAGACATTTGGAGATA+GGG 0.430530 3:-19198892 MsG0380012527.01.T01:three_prime_UTR
TGGTTGAGCAGATAAGATTT+GGG 0.433770 3:-19200117 MsG0380012527.01.T01:CDS
GCCACCATTATATCCATTGA+TGG 0.437848 3:+19198830 None:intergenic
TTGAAGAATGGTGTATCTAT+TGG 0.446784 3:-19197246 MsG0380012527.01.T01:three_prime_UTR
GGTGGTGAAAGAAATTGGTT+TGG 0.457204 3:-19199927 MsG0380012527.01.T01:CDS
TTTGCAGCCATGGGAGCTAT+AGG 0.460190 3:-19201486 MsG0380012527.01.T01:five_prime_UTR
CCTTATTCATACACCATCAA+TGG 0.460986 3:-19198843 MsG0380012527.01.T01:three_prime_UTR
TTGGAGATAGGGTTAAGCAT+TGG 0.464172 3:-19198881 MsG0380012527.01.T01:three_prime_UTR
ACAAGATCATGAATTCCCTT+TGG 0.467164 3:+19196869 None:intergenic
GTGAATGTGTCCCATATACT+TGG 0.475650 3:+19200444 None:intergenic
AACATCCAGGTCTTGTATCA+TGG 0.489191 3:+19200568 None:intergenic
GGTAGATGCTCTAAATATGT+TGG 0.494224 3:-19198795 MsG0380012527.01.T01:three_prime_UTR
ATATCTTTGTTATCTTACTT+GGG 0.497039 3:+19199867 None:intergenic
TTATAGAATTTCACTCCTAA+GGG 0.499133 3:+19199365 None:intergenic
AAGTTATGAGCAACAATGTA+GGG 0.502836 3:+19198741 None:intergenic
TGGGAGGGGACCAAGTATAT+GGG 0.502889 3:-19200454 MsG0380012527.01.T01:CDS
ATTAATGAGATCCTTGCAAA+TGG 0.508823 3:-19199335 MsG0380012527.01.T01:intron
TATGTTGGAAATTGTACTAC+TGG 0.509696 3:-19198780 MsG0380012527.01.T01:three_prime_UTR
TTATGCAGACTGATTTGACT+TGG 0.511582 3:-19196904 MsG0380012527.01.T01:intron
TCATGCTTACCTTCTCCAGC+AGG 0.511957 3:+19200538 None:intergenic
CAAGTTATGAGCAACAATGT+AGG 0.512417 3:+19198740 None:intergenic
TGGATGTTATGTTATCCTGC+TGG 0.520767 3:-19200553 MsG0380012527.01.T01:CDS
GATATCACAATTTGCAGCCA+TGG 0.521223 3:-19201496 MsG0380012527.01.T01:five_prime_UTR
AAGGAGCTTCAGATATAGAT+GGG 0.521400 3:-19200473 MsG0380012527.01.T01:CDS
TGGTGTATCTATTGGTCCCT+CGG 0.524206 3:-19197238 MsG0380012527.01.T01:intron
TCTAATGATATCATATGCAG+AGG 0.538128 3:-19199405 MsG0380012527.01.T01:intron
AGCTTCAGATATAGATGGGA+GGG 0.538873 3:-19200469 MsG0380012527.01.T01:CDS
TGGCTCTATGTCTATCCAAA+GGG 0.545375 3:-19196884 MsG0380012527.01.T01:three_prime_UTR
ATATCACAATTTGCAGCCAT+GGG 0.552542 3:-19201495 MsG0380012527.01.T01:five_prime_UTR
TTCCAGTGACAACAGCCAAA+AGG 0.552690 3:+19201432 None:intergenic
TTGTATCATGGTCATTTGCA+AGG 0.555504 3:+19200580 None:intergenic
TTCAAAGAAGTGATTCACTA+AGG 0.558400 3:+19198040 None:intergenic
ACATATTTAGAGCATCTACC+AGG 0.559499 3:+19198798 None:intergenic
TTGATCACAGCATTGAAGAA+TGG 0.563467 3:-19197258 MsG0380012527.01.T01:intron
TTATGTTATCCTGCTGGAGA+AGG 0.565181 3:-19200547 MsG0380012527.01.T01:CDS
GATATCATATGCAGAGGGCA+AGG 0.565708 3:-19199399 MsG0380012527.01.T01:intron
GAATATTCTTGACCATGAGA+TGG 0.567125 3:+19199889 None:intergenic
GGAAGGACCTATAGCTCCCA+TGG 0.567501 3:+19201479 None:intergenic
CTCCTACATTACCACTGCTA+TGG 0.568763 3:+19200093 None:intergenic
ATATCATATGCAGAGGGCAA+GGG 0.568782 3:-19199398 MsG0380012527.01.T01:intron
TTGGCTCTATGTCTATCCAA+AGG 0.570642 3:-19196885 MsG0380012527.01.T01:three_prime_UTR
CAATTTCTTTCACCACCTTG+AGG 0.574734 3:+19199933 None:intergenic
ACATTCACTAAACAAAATCC+AGG 0.587307 3:-19200429 MsG0380012527.01.T01:CDS
TATCATATGCAGAGGGCAAG+GGG 0.588157 3:-19199397 MsG0380012527.01.T01:intron
CATACAGATTCTCCATCTCA+TGG 0.592212 3:-19199901 MsG0380012527.01.T01:CDS
GCTTCAGATATAGATGGGAG+GGG 0.594992 3:-19200468 MsG0380012527.01.T01:CDS
AGCAGGATAACATAACATCC+AGG 0.598700 3:+19200555 None:intergenic
CTTGAAGCAAAAGTCAGCAT+AGG 0.616391 3:+19198908 None:intergenic
ACCATCAATGGATATAATGG+TGG 0.645165 3:-19198831 MsG0380012527.01.T01:three_prime_UTR
AATTCCAAAGAGAAATCATG+AGG 0.657160 3:+19201354 None:intergenic
GAGCTTCAGATATAGATGGG+AGG 0.659453 3:-19200470 MsG0380012527.01.T01:CDS
CTAATGATATCATATGCAGA+GGG 0.659771 3:-19199404 MsG0380012527.01.T01:intron
AATGACCATGATACAAGACC+TGG 0.671346 3:-19200573 MsG0380012527.01.T01:CDS
AAGATTTGGGACCATAGCAG+TGG 0.678867 3:-19200104 MsG0380012527.01.T01:intron
ATCATATGCAGAGGGCAAGG+GGG 0.702617 3:-19199396 MsG0380012527.01.T01:intron
TTTGTAGGAAGACCTCAAGG+TGG 0.734404 3:-19199945 MsG0380012527.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAATGAAAAATAAATA+GGG + Chr3:19196781-19196800 None:intergenic 10.0%
!! AAATCTAAAAAAAAATAAGT+TGG - Chr3:19196480-19196499 MsG0380012527.01.T01:intron 10.0%
!! AATATCAATAAATAAATTGT+TGG - Chr3:19201472-19201491 MsG0380012527.01.T01:five_prime_UTR 10.0%
!!! AAAAATTGTTTTATTTGTAA+AGG + Chr3:19198094-19198113 None:intergenic 10.0%
!!! CTATACAAAATATTATATTT+TGG + Chr3:19200179-19200198 None:intergenic 10.0%
!! AAAATAAATATACTATGTAG+TGG + Chr3:19195876-19195895 None:intergenic 15.0%
!! AATGAAATAAAAAAGTTAGT+AGG - Chr3:19198123-19198142 MsG0380012527.01.T01:intron 15.0%
!! ACAAAAATCAAAATAATAGA+GGG - Chr3:19197637-19197656 MsG0380012527.01.T01:intron 15.0%
!! AGATTACAATATATTTATTG+TGG + Chr3:19200140-19200159 None:intergenic 15.0%
!! AGTAAACAATAATAATAGTT+AGG - Chr3:19200782-19200801 MsG0380012527.01.T01:intron 15.0%
!! ATATTTAATCAAGAGTTTAA+TGG - Chr3:19200642-19200661 MsG0380012527.01.T01:intron 15.0%
!! ATCATAATATAATTAGACAA+AGG + Chr3:19200686-19200705 None:intergenic 15.0%
!! ATCTATATAAAGCAAAAAAA+TGG + Chr3:19195647-19195666 None:intergenic 15.0%
!! ATTACTTATAAATAGTTTAC+CGG - Chr3:19196815-19196834 MsG0380012527.01.T01:intron 15.0%
!! CAAATCAATGAAAAATAAAT+AGG + Chr3:19196782-19196801 None:intergenic 15.0%
!! GCCATTTAAAAAATAAAATT+CGG + Chr3:19199412-19199431 None:intergenic 15.0%
!! TATTAAATAATTGATGTATC+AGG - Chr3:19198621-19198640 MsG0380012527.01.T01:intron 15.0%
!! TCTATATAAAGCAAAAAAAT+GGG + Chr3:19195646-19195665 None:intergenic 15.0%
!!! ACCGAATTTTATTTTTTAAA+TGG - Chr3:19199408-19199427 MsG0380012527.01.T01:intron 15.0%
!!! AGTATATTTATTTTGTTACA+TGG - Chr3:19195882-19195901 MsG0380012527.01.T01:three_prime_UTR 15.0%
!!! ATAAACTTCAATTATTTTGT+AGG - Chr3:19197221-19197240 MsG0380012527.01.T01:intron 15.0%
!!! ATTAATTTAATGGATAAAAC+AGG - Chr3:19198237-19198256 MsG0380012527.01.T01:intron 15.0%
!!! CAATTTTTGAAATTTATGTT+TGG - Chr3:19199084-19199103 MsG0380012527.01.T01:intron 15.0%
!!! CTATTTATTTTTCATTGATT+TGG - Chr3:19196780-19196799 MsG0380012527.01.T01:intron 15.0%
!!! TCATAAAATTTGTTAAAAAG+TGG - Chr3:19197700-19197719 MsG0380012527.01.T01:intron 15.0%
!!! TTGTTTTATGAATATTTTTC+AGG - Chr3:19200478-19200497 MsG0380012527.01.T01:CDS 15.0%
!!! TTTTTTTTTAAGAAGCTAAA+AGG - Chr3:19196282-19196301 MsG0380012527.01.T01:intron 15.0%
!! AACAAAGATATCATAATTTG+GGG + Chr3:19199650-19199669 None:intergenic 20.0%
!! AATTAAATTTCTCTCTATCT+TGG - Chr3:19197044-19197063 MsG0380012527.01.T01:intron 20.0%
!! ACAAATTATTCTTTACAGTA+TGG - Chr3:19196083-19196102 MsG0380012527.01.T01:intron 20.0%
!! ACGATGCATTATAATATAAT+CGG + Chr3:19198166-19198185 None:intergenic 20.0%
!! ATTAAGAGAAAAAAGTTATG+TGG - Chr3:19198927-19198946 MsG0380012527.01.T01:intron 20.0%
!! ATTCACAACAAATATTTACT+CGG - Chr3:19200737-19200756 MsG0380012527.01.T01:intron 20.0%
!! CAAATTATGATATCTTTGTT+GGG - Chr3:19199650-19199669 MsG0380012527.01.T01:intron 20.0%
!! CAAATTATTCTTTACAGTAT+GGG - Chr3:19196084-19196103 MsG0380012527.01.T01:intron 20.0%
!! CAACAAAGATATCATAATTT+GGG + Chr3:19199651-19199670 None:intergenic 20.0%
!! CAATATTAATTATTGGAATG+TGG + Chr3:19198852-19198871 None:intergenic 20.0%
!! CACAAAAATCAAAATAATAG+AGG - Chr3:19197636-19197655 MsG0380012527.01.T01:intron 20.0%
!! CATAAACATTTGATATATGT+AGG + Chr3:19196905-19196924 None:intergenic 20.0%
!! TAATACATATTCCAACATAA+GGG - Chr3:19195961-19195980 MsG0380012527.01.T01:three_prime_UTR 20.0%
!! TATATATTGCACAAACAAAT+GGG - Chr3:19198545-19198564 MsG0380012527.01.T01:intron 20.0%
!! TCGTCAACAATATTAATTAT+TGG + Chr3:19198859-19198878 None:intergenic 20.0%
!! TTAATACATATTCCAACATA+AGG - Chr3:19195960-19195979 MsG0380012527.01.T01:three_prime_UTR 20.0%
!! TTACCAAATGTAATATTAGT+TGG + Chr3:19199000-19199019 None:intergenic 20.0%
!! TTACTTGAATATTTGTTTCA+AGG + Chr3:19196543-19196562 None:intergenic 20.0%
!! TTGTTTATAAATGTGATCAA+AGG - Chr3:19198698-19198717 MsG0380012527.01.T01:three_prime_UTR 20.0%
!! TTTCAAATATCATCTTAACT+AGG + Chr3:19198817-19198836 None:intergenic 20.0%
!!! AAAAATAGATCTAACGTTTT+TGG - Chr3:19196046-19196065 MsG0380012527.01.T01:intron 20.0%
!!! AAAGATATCCTTTTTTTTAG+GGG - Chr3:19197329-19197348 MsG0380012527.01.T01:intron 20.0%
!!! AACAATATCATACAATGTTT+TGG - Chr3:19200216-19200235 MsG0380012527.01.T01:intron 20.0%
!!! AATTTTGAGTACTTGTTTAT+AGG - Chr3:19199538-19199557 MsG0380012527.01.T01:intron 20.0%
!!! ACAAAGATATCCTTTTTTTT+AGG - Chr3:19197327-19197346 MsG0380012527.01.T01:intron 20.0%
!!! ACAATATCATACAATGTTTT+GGG - Chr3:19200217-19200236 MsG0380012527.01.T01:intron 20.0%
!!! ATAATTTTACAAAGGGAAAA+AGG - Chr3:19197607-19197626 MsG0380012527.01.T01:intron 20.0%
!!! ATATCTTTGTTATCTTACTT+GGG + Chr3:19197317-19197336 None:intergenic 20.0%
!!! CAAAGATATCCTTTTTTTTA+GGG - Chr3:19197328-19197347 MsG0380012527.01.T01:intron 20.0%
!!! CAATTTAAATTTTCGATCTA+TGG + Chr3:19200054-19200073 None:intergenic 20.0%
!!! GACAATCATAATTTTACAAA+GGG - Chr3:19197600-19197619 MsG0380012527.01.T01:intron 20.0%
!!! TATTATGAGGTAATTTTTGT+TGG - Chr3:19196948-19196967 MsG0380012527.01.T01:intron 20.0%
! AAGAGAAAATATCAGGTAAT+TGG - Chr3:19198497-19198516 MsG0380012527.01.T01:intron 25.0%
! AATAAGTTGTTTATCGAAAC+AGG - Chr3:19201068-19201087 MsG0380012527.01.T01:intron 25.0%
! ACAAAATAAGAAGTGAGTAA+TGG + Chr3:19195941-19195960 None:intergenic 25.0%
! ACATTGGAATTTGAAAAACA+GGG + Chr3:19201366-19201385 None:intergenic 25.0%
! AGCTCATCAAAAAGAAAAAT+TGG - Chr3:19199113-19199132 MsG0380012527.01.T01:intron 25.0%
! AGTATACAAGAGAAAATATC+AGG - Chr3:19198490-19198509 MsG0380012527.01.T01:intron 25.0%
! ATACTACATTTGTGAAGAAT+CGG + Chr3:19200017-19200036 None:intergenic 25.0%
! ATATATTGCACAAACAAATG+GGG - Chr3:19198546-19198565 MsG0380012527.01.T01:intron 25.0%
! ATATTCACAGCTTAATCATT+TGG - Chr3:19201567-19201586 MsG0380012527.01.T01:five_prime_UTR 25.0%
! ATTAGCACAACAAAAAGAAA+TGG + Chr3:19196677-19196696 None:intergenic 25.0%
! CAGAACTGATTAAAAAATCA+TGG - Chr3:19195620-19195639 MsG0380012527.01.T01:three_prime_UTR 25.0%
! CATAAAAAATCTACTTGAGT+TGG - Chr3:19199288-19199307 MsG0380012527.01.T01:intron 25.0%
! CATAATGAATTGATTGAACA+TGG - Chr3:19201105-19201124 MsG0380012527.01.T01:intron 25.0%
! CCAAATTATGATATCTTTGT+TGG - Chr3:19199649-19199668 MsG0380012527.01.T01:intron 25.0%
! CCAACAAAGATATCATAATT+TGG + Chr3:19199652-19199671 None:intergenic 25.0%
! CGATCAATCATTATCAATTA+TGG - Chr3:19198876-19198895 MsG0380012527.01.T01:three_prime_UTR 25.0%
! CGATGCATTATAATATAATC+GGG + Chr3:19198165-19198184 None:intergenic 25.0%
! CTAGAGAAAAAAATAGAGAA+GGG + Chr3:19195726-19195745 None:intergenic 25.0%
! CTATATATTGCACAAACAAA+TGG - Chr3:19198544-19198563 MsG0380012527.01.T01:intron 25.0%
! GAAAAAAAAAATCATACCGA+GGG + Chr3:19199962-19199981 None:intergenic 25.0%
! GATGCATTATAATATAATCG+GGG + Chr3:19198164-19198183 None:intergenic 25.0%
! GTAAAGGAATTAAGTTACTA+GGG + Chr3:19198078-19198097 None:intergenic 25.0%
! GTTTAAAAGTAGAGTAAAGT+GGG + Chr3:19199335-19199354 None:intergenic 25.0%
! TACATTAAAGATTGCAACAT+AGG + Chr3:19196258-19196277 None:intergenic 25.0%
! TACCAATATGTAATGCTTAA+TGG - Chr3:19201429-19201448 MsG0380012527.01.T01:five_prime_UTR 25.0%
! TATATTTATTGTGGCTTCAT+AGG + Chr3:19200131-19200150 None:intergenic 25.0%
! TGACCAACTAATATTACATT+TGG - Chr3:19198994-19199013 MsG0380012527.01.T01:intron 25.0%
! TGATCAAGTGAAAAATGTAA+TGG + Chr3:19199910-19199929 None:intergenic 25.0%
! TGTAAAGGAATTAAGTTACT+AGG + Chr3:19198079-19198098 None:intergenic 25.0%
! TTAGTGACAAGAGATATTTA+AGG + Chr3:19197475-19197494 None:intergenic 25.0%
! TTATAGAATTTCACTCCTAA+GGG + Chr3:19197819-19197838 None:intergenic 25.0%
! TTTAAAAGTAGAGTAAAGTG+GGG + Chr3:19199334-19199353 None:intergenic 25.0%
!! AAAGATTCCTATGATTTTCT+TGG - Chr3:19199716-19199735 MsG0380012527.01.T01:intron 25.0%
!! ACGATTTGGAATAATTTATG+TGG - Chr3:19201231-19201250 MsG0380012527.01.T01:intron 25.0%
!! ATTTAATGGATAAAACAGGA+AGG - Chr3:19198241-19198260 MsG0380012527.01.T01:intron 25.0%
!! GATATCTTTGTTATCTTACT+TGG + Chr3:19197318-19197337 None:intergenic 25.0%
!! GGACAATCATAATTTTACAA+AGG - Chr3:19197599-19197618 MsG0380012527.01.T01:intron 25.0%
!! TGATTTTTATCATCGATACA+AGG - Chr3:19197112-19197131 MsG0380012527.01.T01:intron 25.0%
!! TTACTATTTGAACTTGTTCA+TGG - Chr3:19196006-19196025 MsG0380012527.01.T01:three_prime_UTR 25.0%
!! TTGTATATGCTATAAGTTGA+TGG + Chr3:19200951-19200970 None:intergenic 25.0%
!!! AAGGACAAATTCATTTTTGT+TGG + Chr3:19197456-19197475 None:intergenic 25.0%
!!! ACTTTACTCTACTTTTAAAC+GGG - Chr3:19199335-19199354 MsG0380012527.01.T01:intron 25.0%
!!! AGATTCTAGTTTTGTGAATT+TGG + Chr3:19199687-19199706 None:intergenic 25.0%
!!! AGGACAAATTCATTTTTGTT+GGG + Chr3:19197455-19197474 None:intergenic 25.0%
!!! ATATTTTAAAGCCGTTTTGT+TGG + Chr3:19196417-19196436 None:intergenic 25.0%
!!! ATTCTAGTTTTGTGAATTTG+GGG + Chr3:19199685-19199704 None:intergenic 25.0%
!!! CACTTTACTCTACTTTTAAA+CGG - Chr3:19199334-19199353 MsG0380012527.01.T01:intron 25.0%
!!! GATTCTAGTTTTGTGAATTT+GGG + Chr3:19199686-19199705 None:intergenic 25.0%
!!! TATATTAACTTGTTCATGTG+AGG + Chr3:19198207-19198226 None:intergenic 25.0%
!!! TTTTGTTGTGCTAATTTTTC+AGG - Chr3:19196682-19196701 MsG0380012527.01.T01:three_prime_UTR 25.0%
AAAGTAAATACATGTGCATG+TGG - Chr3:19196371-19196390 MsG0380012527.01.T01:intron 30.0%
AAGAGAAATCATGAGGAAAA+AGG + Chr3:19195823-19195842 None:intergenic 30.0%
AAGTTATGAGCAACAATGTA+GGG + Chr3:19198443-19198462 None:intergenic 30.0%
AATATTAGTTGGTCACATGA+AGG + Chr3:19198989-19199008 None:intergenic 30.0%
AATTCCAAAGAGAAATCATG+AGG + Chr3:19195830-19195849 None:intergenic 30.0%
ACATTCACTAAACAAAATCC+AGG - Chr3:19196752-19196771 MsG0380012527.01.T01:intron 30.0%
ACTCATACTTTATTCCTTCA+AGG + Chr3:19200596-19200615 None:intergenic 30.0%
AGAAAAAAATAGAGAAGGGA+AGG + Chr3:19195722-19195741 None:intergenic 30.0%
AGCTCTTGAAGATGAATATA+AGG - Chr3:19198020-19198039 MsG0380012527.01.T01:three_prime_UTR 30.0%
AGTAAATACTAAGGTGACAT+TGG + Chr3:19201382-19201401 None:intergenic 30.0%
ATATTCTCACAACTACAAAG+TGG + Chr3:19198960-19198979 None:intergenic 30.0%
ATTAATGAGATCCTTGCAAA+TGG - Chr3:19197846-19197865 MsG0380012527.01.T01:intron 30.0%
ATTCACACCAAGAAAATCAT+AGG + Chr3:19199726-19199745 None:intergenic 30.0%
CAATGAAAGAGAGTTACAAA+GGG + Chr3:19197988-19198007 None:intergenic 30.0%
CCAAAAAGTTGTTTACCAAA+TGG + Chr3:19197581-19197600 None:intergenic 30.0%
CGTTTAAAAGTAGAGTAAAG+TGG + Chr3:19199336-19199355 None:intergenic 30.0%
CTAATGATATCATATGCAGA+GGG - Chr3:19197777-19197796 MsG0380012527.01.T01:intron 30.0%
CTTTGTAACTCTCTTTCATT+GGG - Chr3:19197987-19198006 MsG0380012527.01.T01:three_prime_UTR 30.0%
GAAAAATAAATAGGGTAACC+TGG + Chr3:19196773-19196792 None:intergenic 30.0%
GACATTGGAATTTGAAAAAC+AGG + Chr3:19201367-19201386 None:intergenic 30.0%
GATCTAAACTTCATTCTTAG+TGG + Chr3:19196521-19196540 None:intergenic 30.0%
GCTAGAGAAAAAAATAGAGA+AGG + Chr3:19195727-19195746 None:intergenic 30.0%
GCTCTTGAAGATGAATATAA+GGG - Chr3:19198021-19198040 MsG0380012527.01.T01:three_prime_UTR 30.0%
GGAAAAAAAAAATCATACCG+AGG + Chr3:19199963-19199982 None:intergenic 30.0%
GTAAGCAAAAATGATTCTCA+AGG + Chr3:19197947-19197966 None:intergenic 30.0%
GTCAATATGCTTCATTCAAT+AGG - Chr3:19195795-19195814 MsG0380012527.01.T01:three_prime_UTR 30.0%
GTTATAGAATTTCACTCCTA+AGG + Chr3:19197820-19197839 None:intergenic 30.0%
TAACAAACAAGCCAACAAAA+CGG - Chr3:19196403-19196422 MsG0380012527.01.T01:intron 30.0%
TACACCATCAATGGATATAA+TGG - Chr3:19198347-19198366 MsG0380012527.01.T01:intron 30.0%
TATGTTGGAAATTGTACTAC+TGG - Chr3:19198401-19198420 MsG0380012527.01.T01:intron 30.0%
TATTCTCACAACTACAAAGT+GGG + Chr3:19198959-19198978 None:intergenic 30.0%
TCTAATGATATCATATGCAG+AGG - Chr3:19197776-19197795 MsG0380012527.01.T01:intron 30.0%
TCTATATCATAACAAATCGC+TGG - Chr3:19200095-19200114 MsG0380012527.01.T01:intron 30.0%
TGCCATTAAGCATTACATAT+TGG + Chr3:19201434-19201453 None:intergenic 30.0%
TGGTCAAATAAGTGATATCA+AGG - Chr3:19201535-19201554 MsG0380012527.01.T01:five_prime_UTR 30.0%
TTCAAAGAAGTGATTCACTA+AGG + Chr3:19199144-19199163 None:intergenic 30.0%
TTCGATCTATGGTGAAAAAT+TGG + Chr3:19200043-19200062 None:intergenic 30.0%
TTGAAGAATGGTGTATCTAT+TGG - Chr3:19199935-19199954 MsG0380012527.01.T01:CDS 30.0%
TTGATTCTCTAGCAACTTAA+GGG - Chr3:19201505-19201524 MsG0380012527.01.T01:five_prime_UTR 30.0%
TTTGATTCTCTAGCAACTTA+AGG - Chr3:19201504-19201523 MsG0380012527.01.T01:five_prime_UTR 30.0%
! AAGTTTTGCTTGATTACCTT+AGG + Chr3:19200253-19200272 None:intergenic 30.0%
! AGAGATTTTTACCATTTGCA+AGG + Chr3:19197860-19197879 None:intergenic 30.0%
! AGGTAATCAAGCAAAACTTT+TGG - Chr3:19200254-19200273 MsG0380012527.01.T01:intron 30.0%
! ATGCAACTCTTTTCCTATTT+GGG - Chr3:19196922-19196941 MsG0380012527.01.T01:intron 30.0%
! CAATAGTGTTGCTGATAAAA+AGG - Chr3:19199172-19199191 MsG0380012527.01.T01:three_prime_UTR 30.0%
! CCATTTGGTAAACAACTTTT+TGG - Chr3:19197578-19197597 MsG0380012527.01.T01:intron 30.0%
! CTTTTTATCAGCAACACTAT+TGG + Chr3:19199174-19199193 None:intergenic 30.0%
! GAACATGGTAGTTAATGTTT+TGG - Chr3:19201120-19201139 MsG0380012527.01.T01:intron 30.0%
! TATGCAACTCTTTTCCTATT+TGG - Chr3:19196921-19196940 MsG0380012527.01.T01:intron 30.0%
! TTTTCCTCATGATTTCTCTT+TGG - Chr3:19195823-19195842 MsG0380012527.01.T01:three_prime_UTR 30.0%
! TTTTTATAGTCAGTAGAAGC+TGG - Chr3:19200428-19200447 MsG0380012527.01.T01:CDS 30.0%
!! AATCATTTTTGCTTACATGG+TGG - Chr3:19197951-19197970 MsG0380012527.01.T01:intron 30.0%
!! AATTCTACCGTCCATTTTTA+AGG + Chr3:19199363-19199382 None:intergenic 30.0%
!! CTTTACTCTACTTTTAAACG+GGG - Chr3:19199336-19199355 MsG0380012527.01.T01:intron 30.0%
!! GAGAATCATTTTTGCTTACA+TGG - Chr3:19197948-19197967 MsG0380012527.01.T01:intron 30.0%
!! TCATGATTTCTCTTTGGAAT+TGG - Chr3:19195829-19195848 MsG0380012527.01.T01:three_prime_UTR 30.0%
!! TTTGGGTTATTTCTTACCTA+AGG - Chr3:19200234-19200253 MsG0380012527.01.T01:intron 30.0%
!!! TAGTCCATTTCGACATTTTT+TGG + Chr3:19199782-19199801 None:intergenic 30.0%
!!! TATCCTTTTTTTTAGGGGAA+AGG - Chr3:19197334-19197353 MsG0380012527.01.T01:intron 30.0%
!!! TTTTTTCTCTAGCTACCTTT+TGG - Chr3:19195734-19195753 MsG0380012527.01.T01:three_prime_UTR 30.0%
AAAAAGTTAGTAGGTGTTCG+AGG - Chr3:19198132-19198151 MsG0380012527.01.T01:intron 35.0%
AACATAGCCACAACTTAAGA+AGG + Chr3:19196191-19196210 None:intergenic 35.0%
AAGGAGCTTCAGATATAGAT+GGG - Chr3:19196708-19196727 MsG0380012527.01.T01:intron 35.0%
ACAAGATCATGAATTCCCTT+TGG + Chr3:19200315-19200334 None:intergenic 35.0%
ACATAGCCACAACTTAAGAA+GGG + Chr3:19196190-19196209 None:intergenic 35.0%
ACCATCAATGGATATAATGG+TGG - Chr3:19198350-19198369 MsG0380012527.01.T01:intron 35.0%
ACTGCTTTGTGCATAATATG+TGG + Chr3:19199756-19199775 None:intergenic 35.0%
AGATGTCACTACTTCATCTT+TGG - Chr3:19195663-19195682 MsG0380012527.01.T01:three_prime_UTR 35.0%
AGGAACGCAAGTAAATACTA+AGG + Chr3:19201391-19201410 None:intergenic 35.0%
ATATCACAATTTGCAGCCAT+GGG - Chr3:19195686-19195705 MsG0380012527.01.T01:three_prime_UTR 35.0%
ATTCATCTTCAAGAGCTTGT+GGG + Chr3:19198017-19198036 None:intergenic 35.0%
CAAGTTATGAGCAACAATGT+AGG + Chr3:19198444-19198463 None:intergenic 35.0%
CATACTTTATTCCTTCAAGG+AGG + Chr3:19200593-19200612 None:intergenic 35.0%
CCAATGAAAGAGAGTTACAA+AGG + Chr3:19197989-19198008 None:intergenic 35.0%
CCAGTGTACATTACTGAAAA+TGG - Chr3:19200364-19200383 MsG0380012527.01.T01:intron 35.0%
CCTCATAATACAACCCAAAT+AGG + Chr3:19196938-19196957 None:intergenic 35.0%
CCTTATTCATACACCATCAA+TGG - Chr3:19198338-19198357 MsG0380012527.01.T01:intron 35.0%
CCTTTGTAACTCTCTTTCAT+TGG - Chr3:19197986-19198005 MsG0380012527.01.T01:three_prime_UTR 35.0%
CTAAACTTCATTCTTAGTGG+TGG + Chr3:19196518-19196537 None:intergenic 35.0%
CTTCAAGACATTTGGAGATA+GGG - Chr3:19198289-19198308 MsG0380012527.01.T01:intron 35.0%
CTTCCTTTCCCCTAAAAAAA+AGG + Chr3:19197340-19197359 None:intergenic 35.0%
GAATATTCTTGACCATGAGA+TGG + Chr3:19197295-19197314 None:intergenic 35.0%
GAGTAACTCATATAAGCTCT+CGG - Chr3:19196438-19196457 MsG0380012527.01.T01:intron 35.0%
GGATAGTGACCATATGTAAT+GGG + Chr3:19199629-19199648 None:intergenic 35.0%
TAGCTCGTAAAGATGGTATT+AGG - Chr3:19200538-19200557 MsG0380012527.01.T01:CDS 35.0%
TATCACCATCCTCAATACAT+AGG + Chr3:19201411-19201430 None:intergenic 35.0%
TATTCATCTTCAAGAGCTTG+TGG + Chr3:19198018-19198037 None:intergenic 35.0%
TCAGCAACACTATTGGAATA+TGG + Chr3:19199167-19199186 None:intergenic 35.0%
TGATTCTCTAGCAACTTAAG+GGG - Chr3:19201506-19201525 MsG0380012527.01.T01:five_prime_UTR 35.0%
TGCACCAAAAAATGTCGAAA+TGG - Chr3:19199775-19199794 MsG0380012527.01.T01:intron 35.0%
TGGTTGAGCAGATAAGATTT+GGG - Chr3:19197064-19197083 MsG0380012527.01.T01:intron 35.0%
TTAAACGGGGTCCTTAAAAA+TGG - Chr3:19199349-19199368 MsG0380012527.01.T01:intron 35.0%
TTCACAGCTTAATCATTTGG+AGG - Chr3:19201570-19201589 MsG0380012527.01.T01:five_prime_UTR 35.0%
TTGGTTGAGCAGATAAGATT+TGG - Chr3:19197063-19197082 MsG0380012527.01.T01:intron 35.0%
TTGTATCATGGTCATTTGCA+AGG + Chr3:19196604-19196623 None:intergenic 35.0%
TTGTTGCTATGCTAGCTATA+TGG + Chr3:19195912-19195931 None:intergenic 35.0%
TTTGCTCATCCCATTACATA+TGG - Chr3:19199617-19199636 MsG0380012527.01.T01:intron 35.0%
! ACATATTTAGAGCATCTACC+AGG + Chr3:19198386-19198405 None:intergenic 35.0%
! ATATTGCCCTTCTTAAGTTG+TGG - Chr3:19196181-19196200 MsG0380012527.01.T01:intron 35.0%
! CATTTTCGACAGCTATGAAT+GGG - Chr3:19201192-19201211 MsG0380012527.01.T01:intron 35.0%
! CCATTTTCAGTAATGTACAC+TGG + Chr3:19200367-19200386 None:intergenic 35.0%
! CTGTTGTTTGAACAACCATT+TGG - Chr3:19197563-19197582 MsG0380012527.01.T01:three_prime_UTR 35.0%
! GACTTTTGCTTCAAGACATT+TGG - Chr3:19198281-19198300 MsG0380012527.01.T01:intron 35.0%
! GCAGTAACATCAAGGTATTA+AGG + Chr3:19196236-19196255 None:intergenic 35.0%
! GCTTGTCAACGTATTTTCAT+TGG - Chr3:19200904-19200923 MsG0380012527.01.T01:intron 35.0%
! GGTAGATGCTCTAAATATGT+TGG - Chr3:19198386-19198405 MsG0380012527.01.T01:intron 35.0%
! TATTTTGTAGGAAGACCTCA+AGG - Chr3:19197233-19197252 MsG0380012527.01.T01:intron 35.0%
! TCATTTTCGACAGCTATGAA+TGG - Chr3:19201191-19201210 MsG0380012527.01.T01:intron 35.0%
! TCCATGTGTAGTTAGTTTCA+TGG + Chr3:19199506-19199525 None:intergenic 35.0%
! TTGATCACAGCATTGAAGAA+TGG - Chr3:19199923-19199942 MsG0380012527.01.T01:CDS 35.0%
! TTTCAGGCATTGCTACATAT+AGG - Chr3:19200494-19200513 MsG0380012527.01.T01:CDS 35.0%
! TTTTCAGTAATGTACACTGG+TGG + Chr3:19200364-19200383 None:intergenic 35.0%
!! CCATTGATGGTGTATGAATA+AGG + Chr3:19198341-19198360 None:intergenic 35.0%
!! CCTATTTGGGTTGTATTATG+AGG - Chr3:19196935-19196954 MsG0380012527.01.T01:intron 35.0%
!! TTATGCAGACTGATTTGACT+TGG - Chr3:19200277-19200296 MsG0380012527.01.T01:intron 35.0%
!!! CACTTGACTTCTTTTTTGGA+TGG - Chr3:19199207-19199226 MsG0380012527.01.T01:three_prime_UTR 35.0%
!!! GTGCTAATTTTTCAGGTAGA+AGG - Chr3:19196689-19196708 MsG0380012527.01.T01:intron 35.0%
!!! TTGACTTGTTCCACTTTTTG+TGG + Chr3:19195780-19195799 None:intergenic 35.0%
!!! TTTTGAGTTTTCCCTTGAGA+AGG + Chr3:19201314-19201333 None:intergenic 35.0%
AACACAACAACGAAATCACG+AGG + Chr3:19199984-19200003 None:intergenic 40.0%
AATGACCATGATACAAGACC+TGG - Chr3:19196608-19196627 MsG0380012527.01.T01:three_prime_UTR 40.0%
ACTATGTAGTGGTATGAACC+TGG + Chr3:19195865-19195884 None:intergenic 40.0%
ACTTGCGTTCCTATGTATTG+AGG - Chr3:19201399-19201418 MsG0380012527.01.T01:exon 40.0%
AGAGATGGTGCAAATGTGAA+GGG - Chr3:19201156-19201175 MsG0380012527.01.T01:intron 40.0%
AGCAGGATAACATAACATCC+AGG + Chr3:19196629-19196648 None:intergenic 40.0%
AGCTTCAGATATAGATGGGA+GGG - Chr3:19196712-19196731 MsG0380012527.01.T01:intron 40.0%
ATAAGAACCATTCGCGCAAA+AGG - Chr3:19196321-19196340 MsG0380012527.01.T01:intron 40.0%
ATATCATATGCAGAGGGCAA+GGG - Chr3:19197783-19197802 MsG0380012527.01.T01:intron 40.0%
CAACATAGGCAGTAACATCA+AGG + Chr3:19196244-19196263 None:intergenic 40.0%
CAATTTCTTTCACCACCTTG+AGG + Chr3:19197251-19197270 None:intergenic 40.0%
CATACAGATTCTCCATCTCA+TGG - Chr3:19197280-19197299 MsG0380012527.01.T01:intron 40.0%
CTCAAGGTGGTGAAAGAAAT+TGG - Chr3:19197249-19197268 MsG0380012527.01.T01:three_prime_UTR 40.0%
CTGCAAAAGTTCCTTCTCAA+GGG - Chr3:19201300-19201319 MsG0380012527.01.T01:intron 40.0%
CTTGAAGCAAAAGTCAGCAT+AGG + Chr3:19198276-19198295 None:intergenic 40.0%
GAAGGAGCTTCAGATATAGA+TGG - Chr3:19196707-19196726 MsG0380012527.01.T01:intron 40.0%
GATATCACAATTTGCAGCCA+TGG - Chr3:19195685-19195704 MsG0380012527.01.T01:three_prime_UTR 40.0%
GATTCTCTAGCAACTTAAGG+GGG - Chr3:19201507-19201526 MsG0380012527.01.T01:five_prime_UTR 40.0%
GCAAATAACTGCCCTTATGT+TGG + Chr3:19195975-19195994 None:intergenic 40.0%
GCCACCATTATATCCATTGA+TGG + Chr3:19198354-19198373 None:intergenic 40.0%
GCCATGAAACTAACTACACA+TGG - Chr3:19199502-19199521 MsG0380012527.01.T01:intron 40.0%
GCTTCAAGACATTTGGAGAT+AGG - Chr3:19198288-19198307 MsG0380012527.01.T01:intron 40.0%
GGGATAGTGACCATATGTAA+TGG + Chr3:19199630-19199649 None:intergenic 40.0%
GGTGGTGAAAGAAATTGGTT+TGG - Chr3:19197254-19197273 MsG0380012527.01.T01:intron 40.0%
GTCAATGTAGCTCGTAAAGA+TGG - Chr3:19200531-19200550 MsG0380012527.01.T01:CDS 40.0%
GTGAATGTGTCCCATATACT+TGG + Chr3:19196740-19196759 None:intergenic 40.0%
TCTTTACGAGCTACATTGAC+TGG + Chr3:19200531-19200550 None:intergenic 40.0%
TGGAACTGAACCACAAAAAG+TGG - Chr3:19195767-19195786 MsG0380012527.01.T01:three_prime_UTR 40.0%
TGGAGATAGGGTTAAGCATT+GGG - Chr3:19198301-19198320 MsG0380012527.01.T01:intron 40.0%
TGGATGTTATGTTATCCTGC+TGG - Chr3:19196628-19196647 MsG0380012527.01.T01:three_prime_UTR 40.0%
TTACCGGTGAAACTCATACA+CGG - Chr3:19196831-19196850 MsG0380012527.01.T01:three_prime_UTR 40.0%
TTACCGTGTATGAGTTTCAC+CGG + Chr3:19196837-19196856 None:intergenic 40.0%
TTATGTTATCCTGCTGGAGA+AGG - Chr3:19196634-19196653 MsG0380012527.01.T01:three_prime_UTR 40.0%
TTATTCCTTCAAGGAGGTAG+TGG + Chr3:19200587-19200606 None:intergenic 40.0%
TTGCTATGCTAGCTATATGG+TGG + Chr3:19195909-19195928 None:intergenic 40.0%
TTGGAGATAGGGTTAAGCAT+TGG - Chr3:19198300-19198319 MsG0380012527.01.T01:intron 40.0%
! AACATCCAGGTCTTGTATCA+TGG + Chr3:19196616-19196635 None:intergenic 40.0%
! AGCCAAAAAGCAGAGTACTT+GGG + Chr3:19201282-19201301 None:intergenic 40.0%
! ATTTTTGCTTACATGGTGGC+AGG - Chr3:19197955-19197974 MsG0380012527.01.T01:intron 40.0%
! CGCAAAAGGTGTGTTTCAAA+TGG - Chr3:19196335-19196354 MsG0380012527.01.T01:intron 40.0%
! TGGCTCTATGTCTATCCAAA+GGG - Chr3:19200297-19200316 MsG0380012527.01.T01:intron 40.0%
!! ATCCCAAGTACTCTGCTTTT+TGG - Chr3:19201277-19201296 MsG0380012527.01.T01:intron 40.0%
!! GATTTTGATGTCTCTACGAC+AGG + Chr3:19196214-19196233 None:intergenic 40.0%
!! TTGGCTCTATGTCTATCCAA+AGG - Chr3:19200296-19200315 MsG0380012527.01.T01:intron 40.0%
!!! CGAGCACTTGACTTCTTTTT+TGG - Chr3:19199203-19199222 MsG0380012527.01.T01:three_prime_UTR 40.0%
AATGTGAAGGGCTACTATGC+TGG - Chr3:19201168-19201187 MsG0380012527.01.T01:intron 45.0%
ACAGCTATGAATGGGATGCA+GGG - Chr3:19201200-19201219 MsG0380012527.01.T01:intron 45.0%
ACGGGGTCCTTAAAAATGGA+CGG - Chr3:19199353-19199372 MsG0380012527.01.T01:intron 45.0%
CACAAACAAATGGGGTGCAA+TGG - Chr3:19198554-19198573 MsG0380012527.01.T01:intron 45.0%
CAGAGATGGTGCAAATGTGA+AGG - Chr3:19201155-19201174 MsG0380012527.01.T01:intron 45.0%
CTCCTACATTACCACTGCTA+TGG + Chr3:19197091-19197110 None:intergenic 45.0%
GAGCTTCAGATATAGATGGG+AGG - Chr3:19196711-19196730 MsG0380012527.01.T01:intron 45.0%
GATATCATATGCAGAGGGCA+AGG - Chr3:19197782-19197801 MsG0380012527.01.T01:intron 45.0%
GCACCATCTCTGCAAGAAAA+GGG + Chr3:19201147-19201166 None:intergenic 45.0%
GCGTTCCTATGTATTGAGGA+TGG - Chr3:19201403-19201422 MsG0380012527.01.T01:five_prime_UTR 45.0%
GCTGCAAAAGTTCCTTCTCA+AGG - Chr3:19201299-19201318 MsG0380012527.01.T01:intron 45.0%
GCTTCAGATATAGATGGGAG+GGG - Chr3:19196713-19196732 MsG0380012527.01.T01:intron 45.0%
GTTGCTGATAAAAAGGCTGC+AGG - Chr3:19199179-19199198 MsG0380012527.01.T01:three_prime_UTR 45.0%
TATCATATGCAGAGGGCAAG+GGG - Chr3:19197784-19197803 MsG0380012527.01.T01:intron 45.0%
TGCACCATCTCTGCAAGAAA+AGG + Chr3:19201148-19201167 None:intergenic 45.0%
TGGTGTATCTATTGGTCCCT+CGG - Chr3:19199943-19199962 MsG0380012527.01.T01:intron 45.0%
TTCCAGTGACAACAGCCAAA+AGG + Chr3:19195752-19195771 None:intergenic 45.0%
TTTGTAGGAAGACCTCAAGG+TGG - Chr3:19197236-19197255 MsG0380012527.01.T01:intron 45.0%
! AAACACACCTTTTGCGCGAA+TGG + Chr3:19196331-19196350 None:intergenic 45.0%
! AAGATTTGGGACCATAGCAG+TGG - Chr3:19197077-19197096 MsG0380012527.01.T01:intron 45.0%
! CAGCCAAAAAGCAGAGTACT+TGG + Chr3:19201283-19201302 None:intergenic 45.0%
! GACCATAGCAGTGGTAATGT+AGG - Chr3:19197086-19197105 MsG0380012527.01.T01:intron 45.0%
! TTATGGTTGATGTGTGCGCA+AGG - Chr3:19198893-19198912 MsG0380012527.01.T01:three_prime_UTR 45.0%
!! GGTAGTGGAGATGGTCATTA+TGG + Chr3:19200572-19200591 None:intergenic 45.0%
!! TACCTTTTGGCTGTTGTCAC+TGG - Chr3:19195747-19195766 MsG0380012527.01.T01:three_prime_UTR 45.0%
!! AATAAATTAATTATTGAAAA+AGG + Chr3:19197906-19197925 None:intergenic 5.0%
!! TAAACTTATTATTAATTTAA+TGG - Chr3:19198227-19198246 MsG0380012527.01.T01:intron 5.0%
!! TAAATAATAAATATATTGAA+AGG - Chr3:19197187-19197206 MsG0380012527.01.T01:intron 5.0%
!!! AAATTTAATTCTTTTTATTA+AGG + Chr3:19197034-19197053 None:intergenic 5.0%
ATCATATGCAGAGGGCAAGG+GGG - Chr3:19197785-19197804 MsG0380012527.01.T01:intron 50.0%
ATGGGAGGGGACCAAGTATA+TGG - Chr3:19196726-19196745 MsG0380012527.01.T01:intron 50.0%
CATCTCCACTACCTCCTTGA+AGG - Chr3:19200579-19200598 MsG0380012527.01.T01:CDS 50.0%
GACAGCTATGAATGGGATGC+AGG - Chr3:19201199-19201218 MsG0380012527.01.T01:intron 50.0%
GCAGGGTACACAGTACGATT+TGG - Chr3:19201217-19201236 MsG0380012527.01.T01:intron 50.0%
TCATGCTTACCTTCTCCAGC+AGG + Chr3:19196646-19196665 None:intergenic 50.0%
TCTAGCAACTTAAGGGGGCA+TGG - Chr3:19201512-19201531 MsG0380012527.01.T01:five_prime_UTR 50.0%
TGGGAGGGGACCAAGTATAT+GGG - Chr3:19196727-19196746 MsG0380012527.01.T01:intron 50.0%
TTTGCAGCCATGGGAGCTAT+AGG - Chr3:19195695-19195714 MsG0380012527.01.T01:three_prime_UTR 50.0%
! AATGGTGGCACTTTTGCACC+TGG - Chr3:19198365-19198384 MsG0380012527.01.T01:intron 50.0%
! GGAATTGGCTTCTGCTTACC+AGG - Chr3:19195844-19195863 MsG0380012527.01.T01:three_prime_UTR 50.0%
! GGTCCCTTTTCTTGCAGAGA+TGG - Chr3:19201141-19201160 MsG0380012527.01.T01:intron 50.0%
!! CTTCAAGGAGGTAGTGGAGA+TGG + Chr3:19200581-19200600 None:intergenic 50.0%
AAGGGGGCAGTCAATCCCTT+AGG - Chr3:19197801-19197820 MsG0380012527.01.T01:intron 55.0%
GGAAGGACCTATAGCTCCCA+TGG + Chr3:19195705-19195724 None:intergenic 55.0%
! AGCAACTTAAGGGGGCATGG+TGG - Chr3:19201515-19201534 MsG0380012527.01.T01:five_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
Chr3 gene 19195614 19201589 19195614 ID=MsG0380012527.01;Name=MsG0380012527.01
Chr3 mRNA 19195614 19201589 19195614 ID=MsG0380012527.01.T01;Parent=MsG0380012527.01;Name=MsG0380012527.01.T01;_AED=0.47;_eAED=0.52;_QI=187|0.72|0.83|1|0.09|0.16|12|1364|161
Chr3 exon 19201338 19201589 19201338 ID=MsG0380012527.01.T01:exon:3969;Parent=MsG0380012527.01.T01
Chr3 exon 19200402 19200611 19200402 ID=MsG0380012527.01.T01:exon:3970;Parent=MsG0380012527.01.T01
Chr3 exon 19200105 19200183 19200105 ID=MsG0380012527.01.T01:exon:3971;Parent=MsG0380012527.01.T01
Chr3 exon 19199809 19199960 19199809 ID=MsG0380012527.01.T01:exon:3972;Parent=MsG0380012527.01.T01
Chr3 exon 19198692 19198944 19198692 ID=MsG0380012527.01.T01:exon:3974;Parent=MsG0380012527.01.T01
Chr3 exon 19197975 19198089 19197975 ID=MsG0380012527.01.T01:exon:3975;Parent=MsG0380012527.01.T01
Chr3 exon 19197239 19197270 19197239 ID=MsG0380012527.01.T01:exon:3977;Parent=MsG0380012527.01.T01
Chr3 exon 19196818 19196918 19196818 ID=MsG0380012527.01.T01:exon:3978;Parent=MsG0380012527.01.T01
Chr3 five_prime_UTR 19201403 19201589 19201403 ID=MsG0380012527.01.T01:five_prime_utr;Parent=MsG0380012527.01.T01
Chr3 CDS 19201338 19201402 19201338 ID=MsG0380012527.01.T01:cds;Parent=MsG0380012527.01.T01
Chr3 CDS 19200402 19200611 19200402 ID=MsG0380012527.01.T01:cds;Parent=MsG0380012527.01.T01
Chr3 CDS 19200105 19200183 19200105 ID=MsG0380012527.01.T01:cds;Parent=MsG0380012527.01.T01
Chr3 CDS 19199829 19199960 19199829 ID=MsG0380012527.01.T01:cds;Parent=MsG0380012527.01.T01
Chr3 three_prime_UTR 19199809 19199828 19199809 ID=MsG0380012527.01.T01:three_prime_utr;Parent=MsG0380012527.01.T01
Chr3 three_prime_UTR 19199139 19199226 19199139 ID=MsG0380012527.01.T01:three_prime_utr;Parent=MsG0380012527.01.T01
Chr3 three_prime_UTR 19198692 19198944 19198692 ID=MsG0380012527.01.T01:three_prime_utr;Parent=MsG0380012527.01.T01
Chr3 three_prime_UTR 19197975 19198089 19197975 ID=MsG0380012527.01.T01:three_prime_utr;Parent=MsG0380012527.01.T01
Chr3 three_prime_UTR 19197373 19197587 19197373 ID=MsG0380012527.01.T01:three_prime_utr;Parent=MsG0380012527.01.T01
Chr3 three_prime_UTR 19197239 19197270 19197239 ID=MsG0380012527.01.T01:three_prime_utr;Parent=MsG0380012527.01.T01
Chr3 three_prime_UTR 19196818 19196918 19196818 ID=MsG0380012527.01.T01:three_prime_utr;Parent=MsG0380012527.01.T01
Chr3 three_prime_UTR 19196596 19196703 19196596 ID=MsG0380012527.01.T01:three_prime_utr;Parent=MsG0380012527.01.T01
Chr3 three_prime_UTR 19195614 19196045 19195614 ID=MsG0380012527.01.T01:three_prime_utr;Parent=MsG0380012527.01.T01
Chr3 mRNA 19195614 19199423 19195614 ID=MsG0380012527.01.T02;Parent=MsG0380012527.01;Name=MsG0380012527.01.T02;_AED=0.48;_eAED=0.48;_QI=0|0.6|0.66|1|0.4|0.33|6|499|236
Chr3 exon 19199336 19199423 19199336 ID=MsG0380012527.01.T02:exon:3981;Parent=MsG0380012527.01.T02
Chr3 exon 19198666 19198944 19198666 ID=MsG0380012527.01.T02:exon:3982;Parent=MsG0380012527.01.T02
Chr3 CDS 19199336 19199423 19199336 ID=MsG0380012527.01.T02:cds;Parent=MsG0380012527.01.T02
Chr3 CDS 19199139 19199226 19199139 ID=MsG0380012527.01.T02:cds;Parent=MsG0380012527.01.T02
Chr3 CDS 19198666 19198944 19198666 ID=MsG0380012527.01.T02:cds;Parent=MsG0380012527.01.T02
Chr3 CDS 19197373 19197587 19197373 ID=MsG0380012527.01.T02:cds;Parent=MsG0380012527.01.T02
Chr3 CDS 19196663 19196703 19196663 ID=MsG0380012527.01.T02:cds;Parent=MsG0380012527.01.T02
Chr3 three_prime_UTR 19196596 19196662 19196596 ID=MsG0380012527.01.T02:three_prime_utr;Parent=MsG0380012527.01.T02
Chr3 three_prime_UTR 19195614 19196045 19195614 ID=MsG0380012527.01.T02:three_prime_utr;Parent=MsG0380012527.01.T02
Gene Sequence

>MsG0380012527.01.T01

ATGCTTCATTCAATAGGAGCCTTTTTCCTCATGATTTCTCTTTGGAATTGGCTTCTGCTTACCAGAGCTTTGCTCCTTGCAAATGACCATGATACAAGACCTGGATGTTATGTTATCCTGCTGGAGAAGGTAAGCATGAATCATTTACCATTTCTTTTTGTTGTGCTAATTTTTCAGGTAGAAGGAGCTTCAGATATAGATGGGAGGGGACCAAGTATATGGGACACATTCACTAAACAAAATCCAGGTTACCCTATTTATTTTTCATTGATTTGCTCATACACGACCTTAATAAAAAGAATTAAATTTCTCTCTATCTTGGTTGAGCAGATAAGATTTGGGACCATAGCAGTGGAAGACCTCAAGGTGGTGAAAGAAATTGGTTTGGACTCATACAGATTCTCCATCTCATGGTCAAGAATATTCCCAAGTAAGATAACAAAGATATCCTTTTTTTTAGGGGAAAGGAAGAAAACAAAGATATAA

>MsG0380012527.01.T02

ATGATATCATATGCAGAGGGCAAGGGGGCAGTCAATCCCTTAGGAGTGAAATTCTATAACAATCTCATTAATGAGATCCTTGCAAATGGCTTAGTACCCTTTGTAACTCTCTTTCATTGGGATCTCCCACAAGCTCTTGAAGATGAATATAAGGGATTTCTAAGTAAAAATATAACGAAGGATTTTGCAGCCTATGCTGACTTTTGCTTCAAGACATTTGGAGATAGGGTTAAGCATTGGGTGACACTTAATGAACCTTATTCATACACCATCAATGGATATAATGGTGGCACTTTTGCACCTGGTAGATGCTCTAAATATGTTGGAAATTGTACTACTGGTGACTCAAGTACAGAGCCCTACATTGTTGCTCATAACTTGATACTTTCTCATGCTGCTGCAGTCAGAGTATACAAGAGAAAATATCAGGTAATTGGTTTCAAAATTATCAAAATGTTTGCTCATCCCATTACATATGGTCACTATCCCCAAATTATGATATCTTTGTTGGGTAAAAGACTCCCCAAATTCACAAAACTAGAATCTGTAATTATCAAAGATTCCTATGATTTTCTTGGTGTGAATTATTACTCCACATATTATGCACAAAGCAGTGCACCAAAAAATGTCGAAATGGACTACTACTCTGATATGCAAGCAACTGTCTCTCGCATTGCTACATATAGGAATGACTCAATCCAGTCAATGTAG

Protein sequence

>MsG0380012527.01.T01

MLHSIGAFFLMISLWNWLLLTRALLLANDHDTRPGCYVILLEKVSMNHLPFLFVVLIFQVEGASDIDGRGPSIWDTFTKQNPGYPIYFSLICSYTTLIKRIKFLSILVEQIRFGTIAVEDLKVVKEIGLDSYRFSISWSRIFPSKITKISFFLGERKKTKI*

>MsG0380012527.01.T02

MISYAEGKGAVNPLGVKFYNNLINEILANGLVPFVTLFHWDLPQALEDEYKGFLSKNITKDFAAYADFCFKTFGDRVKHWVTLNEPYSYTINGYNGGTFAPGRCSKYVGNCTTGDSSTEPYIVAHNLILSHAAAVRVYKRKYQVIGFKIIKMFAHPITYGHYPQIMISLLGKRLPKFTKLESVIIKDSYDFLGVNYYSTYYAQSSAPKNVEMDYYSDMQATVSRIATYRNDSIQSM*