AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036881.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036881.01.T01 MTR_7g022480 64.176 455 49 6 1 455 1 341 0.0 539
MsG0780036881.01.T01 MTR_4g132870 58.182 55 22 1 77 131 216 269 3.60e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036881.01.T01 AT2G35450 74.375 160 41 0 139 298 96 255 1.96e-83 261
MsG0780036881.01.T01 AT2G35450 75.281 89 22 0 360 448 254 342 1.20e-37 140

Find 114 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCAAATTTATGATTAAT+TGG 0.189298 7:-15613805 None:intergenic
GTCAATTGCATCTACGATTT+TGG 0.195768 7:-15617468 None:intergenic
TCACCAGATGGCCACAAATA+AGG 0.211375 7:-15614660 None:intergenic
AAGAACACCATTTCCTTATC+TGG 0.226112 7:+15616693 MsG0780036881.01.T01:CDS
AATAAGCTGCACTGCTTCTT+TGG 0.236695 7:-15616913 None:intergenic
AAGACAACAACCAACAAATT+TGG 0.243008 7:-15614355 None:intergenic
GCTCCTTTGTATCCACATTC+AGG 0.303822 7:-15616891 None:intergenic
TTGCAGATGACAAATGAAAT+AGG 0.323712 7:+15615143 MsG0780036881.01.T01:intron
CACCAGATGGCCACAAATAA+GGG 0.329823 7:-15614659 None:intergenic
TCCCAACTTGTCTCTAGCTT+TGG 0.332579 7:+15616733 MsG0780036881.01.T01:CDS
CTCCATAAGCTGCAAAAGTT+TGG 0.339824 7:-15613749 None:intergenic
TTGATTCACATCTACACGTT+TGG 0.340157 7:+15612068 MsG0780036881.01.T01:CDS
TGAGGGTAAAACTGCTTAAC+TGG 0.353439 7:+15617277 MsG0780036881.01.T01:three_prime_UTR
TGTGCACAATTGCTCAATTT+CGG 0.364529 7:-15615718 None:intergenic
CCACATTCAGGAACAACAAA+TGG 0.375048 7:-15616879 None:intergenic
AAATATCCAACCAAATTTGT+TGG 0.375454 7:+15614345 MsG0780036881.01.T01:CDS
AACCCTTATTTGTGGCCATC+TGG 0.376692 7:+15614657 MsG0780036881.01.T01:CDS
CAGTGACAAGTGTAGAAGTT+TGG 0.385538 7:-15617139 None:intergenic
TGATTCACATCTACACGTTT+GGG 0.392336 7:+15612069 MsG0780036881.01.T01:CDS
TTAGATTCAACCCTTATTTG+TGG 0.394657 7:+15614649 MsG0780036881.01.T01:CDS
AGTTGTATTGCTTGATCACT+TGG 0.396161 7:+15615755 MsG0780036881.01.T01:CDS
TAGATTTGTGTTATGTATCA+TGG 0.400545 7:+15613715 MsG0780036881.01.T01:intron
TCTTGGTCGAGCCTTAGTTT+TGG 0.402547 7:+15617060 MsG0780036881.01.T01:three_prime_UTR
CTTGCTTAGCAGCAGTCAAC+TGG 0.412780 7:-15617010 None:intergenic
GACTTACTTGGTTCTCGTGT+TGG 0.414137 7:-15612617 None:intergenic
ATTCTAATTGTAGTATTTGA+AGG 0.421850 7:-15611998 None:intergenic
TCAAGCAATACAACTGTAGA+TGG 0.433653 7:-15615747 None:intergenic
ACTACAATTAGAATGTCTTC+AGG 0.434849 7:+15612007 MsG0780036881.01.T01:CDS
TTTACTGTATACACAATTTG+AGG 0.435704 7:-15617371 None:intergenic
ATGGAGGAAGCAGGAGTAGA+TGG 0.436593 7:+15613766 MsG0780036881.01.T01:CDS
AACTTTCCTTTCAACTTAAG+TGG 0.437326 7:-15612534 None:intergenic
TTCAGTGTAATTACAAGTGT+TGG 0.456699 7:-15616070 None:intergenic
TCTAGATAGATTTAAAAGCT+TGG 0.465053 7:-15615891 None:intergenic
AGCAAGATTCTGATTGAGGT+TGG 0.466587 7:+15617027 MsG0780036881.01.T01:exon
CCATTTGTTGTTCCTGAATG+TGG 0.466806 7:+15616879 MsG0780036881.01.T01:CDS
TTTCAAATTATTAGCTATGT+CGG 0.467253 7:+15616105 MsG0780036881.01.T01:CDS
CTCAGACCGGTGATGTTGTA+TGG 0.468723 7:+15612570 MsG0780036881.01.T01:CDS
GCACGGACACTCCTCGGTTT+AGG 0.469419 7:+15616001 MsG0780036881.01.T01:intron
TTGGAGGTTGAAGAAGTTGA+AGG 0.473626 7:-15612040 None:intergenic
GCAAGATTCTGATTGAGGTT+GGG 0.474321 7:+15617028 MsG0780036881.01.T01:exon
GACAAATCCAGATAAGGAAA+TGG 0.475732 7:-15616700 None:intergenic
TGCCTTCTTCTGATTTAGAG+TGG 0.476878 7:+15616952 MsG0780036881.01.T01:CDS
TTCTGATTTAGAGTGGATCA+TGG 0.480955 7:+15616959 MsG0780036881.01.T01:CDS
GGCATGCTTGACTTACTTGT+GGG 0.481044 7:-15615916 None:intergenic
AGCCCGCTTCCATCATCAGC+TGG 0.481787 7:-15614384 None:intergenic
TTTGTGGCCATCTGGTGAAA+AGG 0.482600 7:+15614665 MsG0780036881.01.T01:CDS
TCCTCGGTTTAGGCGTGTCC+CGG 0.484279 7:+15616011 MsG0780036881.01.T01:CDS
TACGTACAAATCATTGTTCG+AGG 0.486179 7:+15611936 MsG0780036881.01.T01:CDS
TTACAATGGTGGTTTGCAAA+AGG 0.487795 7:-15615778 None:intergenic
CACCAAAGCTAGAGACAAGT+TGG 0.491047 7:-15616735 None:intergenic
TTGCAGCTTATGGAGGAAGC+AGG 0.502613 7:+15613757 MsG0780036881.01.T01:CDS
CACATTCAGGAACAACAAAT+GGG 0.505338 7:-15616878 None:intergenic
CTTGCTAATCCAGCTGATGA+TGG 0.508137 7:+15614375 MsG0780036881.01.T01:CDS
AGCAGAAGTTATAACTCGGC+AGG 0.509515 7:+15617338 MsG0780036881.01.T01:three_prime_UTR
GTTTGAACATCTTGTTCTCA+AGG 0.510608 7:+15614413 MsG0780036881.01.T01:CDS
TGTTGTATGGTACGAAGTGT+TGG 0.511146 7:+15612583 MsG0780036881.01.T01:CDS
CACAACACGTGTCCGACACC+GGG 0.511444 7:-15616029 None:intergenic
AATCATATAAAGAAGAATGT+AGG 0.512351 7:-15617308 None:intergenic
CAACAACCAACAAATTTGGT+TGG 0.514580 7:-15614351 None:intergenic
TGGAGGTTGAAGAAGTTGAA+GGG 0.515389 7:-15612039 None:intergenic
GTTTAGGCGTGTCCCGGTGT+CGG 0.516310 7:+15616017 MsG0780036881.01.T01:CDS
GCTAAGCAAGATTCTGATTG+AGG 0.521983 7:+15617023 MsG0780036881.01.T01:CDS
TACAACTGAAACTGAAAGTA+CGG 0.525056 7:-15611915 None:intergenic
AGGTTGGGAATGTTACCTCT+TGG 0.528094 7:+15617043 MsG0780036881.01.T01:exon
CATGAAGCACGGACACTCCT+CGG 0.537278 7:+15615995 MsG0780036881.01.T01:intron
TAGATGTGAATCAATGACTT+TGG 0.538207 7:-15612059 None:intergenic
ATCCACTCTAAATCAGAAGA+AGG 0.538612 7:-15616954 None:intergenic
ACACAACACGTGTCCGACAC+CGG 0.541163 7:-15616030 None:intergenic
TGGTGCTAATCGTGTAATGT+GGG 0.541348 7:+15616753 MsG0780036881.01.T01:CDS
TCTGATTTAGAGTGGATCAT+GGG 0.542498 7:+15616960 MsG0780036881.01.T01:CDS
GTTGTATGGTACGAAGTGTT+GGG 0.547571 7:+15612584 MsG0780036881.01.T01:CDS
AATTGTGTATACAGTAAACT+AGG 0.549129 7:+15617376 MsG0780036881.01.T01:three_prime_UTR
AGGCATGCTTGACTTACTTG+TGG 0.551195 7:-15615917 None:intergenic
CACGGACACGACACAGACAC+TGG 0.555424 7:-15616132 None:intergenic
AAAGTACCACTTAAGTTGAA+AGG 0.555791 7:+15612528 MsG0780036881.01.T01:CDS
CTAATCGTGTAATGTGGGGC+AGG 0.555996 7:+15616758 MsG0780036881.01.T01:CDS
TTGAAATAGAGAAGAGCCTC+AGG 0.557091 7:+15612489 MsG0780036881.01.T01:intron
AGAGGAGACAAATCCAGATA+AGG 0.564817 7:-15616706 None:intergenic
GACATAATGAAGCACGGACA+CGG 0.566240 7:-15616156 None:intergenic
TTGGTGCTAATCGTGTAATG+TGG 0.566808 7:+15616752 MsG0780036881.01.T01:CDS
ATCCAGCTGATGATGGAAGC+GGG 0.567449 7:+15614382 MsG0780036881.01.T01:CDS
AGTTGGCTTCATGTGTATGA+AGG 0.568814 7:+15615205 MsG0780036881.01.T01:CDS
CGTTTGGGCTTCCCCTCAAG+AGG 0.572551 7:+15612084 MsG0780036881.01.T01:CDS
GGGGAACTCAATGTAGCAGT+TGG 0.572576 7:+15615188 MsG0780036881.01.T01:CDS
AATCCAGCTGATGATGGAAG+CGG 0.572971 7:+15614381 MsG0780036881.01.T01:CDS
TGCAAAATAGCTTACAATGG+TGG 0.577623 7:-15615789 None:intergenic
TTCGAGCTTCTATAAAATTG+CGG 0.578812 7:-15617115 None:intergenic
ACCAAAGCTAGAGACAAGTT+GGG 0.579274 7:-15616734 None:intergenic
CTATCGTGCAGCACTCAGAC+CGG 0.587849 7:+15612557 MsG0780036881.01.T01:CDS
GGCAGTTGAGCGTAACGGAG+TGG 0.588346 7:+15617397 MsG0780036881.01.T01:three_prime_UTR
TTCGTACCATACAACATCAC+CGG 0.595815 7:-15612576 None:intergenic
ATGAAGCACGGACACGGACA+CGG 0.603417 7:-15616150 None:intergenic
TACAAGTGTTGGTGCCGTGT+CGG 0.606804 7:-15616059 None:intergenic
AACTAGGCAGTTGAGCGTAA+CGG 0.616021 7:+15617392 MsG0780036881.01.T01:three_prime_UTR
TGTTGCAGAAATGATGAGGA+AGG 0.627736 7:+15615857 MsG0780036881.01.T01:intron
TCATTTGACATAATGAAGCA+CGG 0.628438 7:-15616162 None:intergenic
ATGTGAATCAATGACTTTGG+AGG 0.635258 7:-15612056 None:intergenic
CTGAAACTGAAACTGAACGT+GGG 0.639928 7:-15611962 None:intergenic
GAGACAAGTTGGGACAAGAG+AGG 0.640446 7:-15616724 None:intergenic
TCTAAATCAGAAGAAGGCAA+AGG 0.644232 7:-15616948 None:intergenic
TTGAGCGTAACGGAGTGGAA+AGG 0.644476 7:+15617402 MsG0780036881.01.T01:three_prime_UTR
ACTATGTTGCAGAAATGATG+AGG 0.644532 7:+15615853 MsG0780036881.01.T01:intron
GTTATGTATCATGGATGCTG+TGG 0.646542 7:+15613724 MsG0780036881.01.T01:CDS
TATTAGCAGAAGTTATAACT+CGG 0.647302 7:+15617334 MsG0780036881.01.T01:three_prime_UTR
CTTATCACTCGAAACACCTG+AGG 0.647716 7:-15612505 None:intergenic
AAAACTAAGGCTCGACCAAG+AGG 0.649911 7:-15617058 None:intergenic
TCTGAAACTGAAACTGAACG+TGG 0.660700 7:-15611963 None:intergenic
TTGATCATAGTTATGTCACA+AGG 0.666392 7:+15613821 MsG0780036881.01.T01:CDS
AAGGGTTGAATCTAACAGCA+CGG 0.668242 7:-15614641 None:intergenic
ACCGGGACACGCCTAAACCG+AGG 0.670736 7:-15616012 None:intergenic
GTTCCTGAATGTGGATACAA+AGG 0.684501 7:+15616888 MsG0780036881.01.T01:CDS
GTATGGTACGAAGTGTTGGG+CGG 0.704671 7:+15612587 MsG0780036881.01.T01:CDS
TGTTGTGTCAGACACCGACA+CGG 0.717162 7:+15616045 MsG0780036881.01.T01:CDS
GGTGCTAATCGTGTAATGTG+GGG 0.737093 7:+15616754 MsG0780036881.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATAACAAAAATAAAATAA+AGG + Chr7:15613982-15614001 MsG0780036881.01.T01:intron 10.0%
!! TTTGTAATTAATAAATCTAT+TGG + Chr7:15614783-15614802 MsG0780036881.01.T01:intron 10.0%
!!! TATATTTTGATATACTAATA+GGG - Chr7:15615473-15615492 None:intergenic 10.0%
!!! TTATATTTTGATATACTAAT+AGG - Chr7:15615474-15615493 None:intergenic 10.0%
!! AAATAAATAAACAATGTTTG+AGG - Chr7:15612166-15612185 None:intergenic 15.0%
!! TCGATAATAATTTAAACAAA+TGG - Chr7:15614503-15614522 None:intergenic 15.0%
!! TGATCAAATTTATGATTAAT+TGG - Chr7:15613808-15613827 None:intergenic 15.0%
!! TGCAATTAACAAAATAATAT+AGG - Chr7:15615940-15615959 None:intergenic 15.0%
!! TTCTCATGATTAAAATAAAA+GGG - Chr7:15615242-15615261 None:intergenic 15.0%
!!! AAAATTGATTTTGTTTGAAT+TGG - Chr7:15615323-15615342 None:intergenic 15.0%
!!! TATATTAATTACTTGTTTTG+AGG - Chr7:15615393-15615412 None:intergenic 15.0%
!!! TTAATTTTCTTATAACATCA+TGG + Chr7:15615967-15615986 MsG0780036881.01.T01:intron 15.0%
!!! TTATATTACTTTGATTAGTT+AGG + Chr7:15614757-15614776 MsG0780036881.01.T01:intron 15.0%
!! AAATTTGAATTTATGATGAC+AGG + Chr7:15616636-15616655 MsG0780036881.01.T01:intron 20.0%
!! AATCATATAAAGAAGAATGT+AGG - Chr7:15617311-15617330 None:intergenic 20.0%
!! AGACAAAATCATTCAAAAAT+GGG - Chr7:15613367-15613386 None:intergenic 20.0%
!! AGATCATTTGAATATAAATC+AGG - Chr7:15615121-15615140 None:intergenic 20.0%
!! ATAAAAGATTGCAATTACTT+TGG - Chr7:15616413-15616432 None:intergenic 20.0%
!! ATAAATCATCATATTCAAGT+TGG + Chr7:15612462-15612481 MsG0780036881.01.T01:intron 20.0%
!! ATACAGTAAAAATAGGAAAA+AGG + Chr7:15616789-15616808 MsG0780036881.01.T01:intron 20.0%
!! ATTCTAATTGTAGTATTTGA+AGG - Chr7:15612001-15612020 None:intergenic 20.0%
!! CATAAAAAATCGTTATATCT+TGG + Chr7:15613567-15613586 MsG0780036881.01.T01:intron 20.0%
!! GTTCTCATGATTAAAATAAA+AGG - Chr7:15615243-15615262 None:intergenic 20.0%
!! TACAGTAAAAATAGGAAAAA+GGG + Chr7:15616790-15616809 MsG0780036881.01.T01:intron 20.0%
!! TCTCATGATTAAAATAAAAG+GGG - Chr7:15615241-15615260 None:intergenic 20.0%
!! TGAATGTAAAACATGATAAA+AGG + Chr7:15616182-15616201 MsG0780036881.01.T01:intron 20.0%
!! TTATAGGCTTCATTATTTAA+GGG - Chr7:15616448-15616467 None:intergenic 20.0%
!! TTCAAAAACCAAAACAAAAA+AGG - Chr7:15613247-15613266 None:intergenic 20.0%
!! TTTACTATTGCAATGAATTA+TGG + Chr7:15613493-15613512 MsG0780036881.01.T01:intron 20.0%
!! TTTCAAATTATTAGCTATGT+CGG + Chr7:15616105-15616124 MsG0780036881.01.T01:CDS 20.0%
!!! AAAAGTCTTTTAAAGACATT+AGG - Chr7:15612419-15612438 None:intergenic 20.0%
!!! AATAAGTTGAATAATTTCAG+GGG + Chr7:15615679-15615698 MsG0780036881.01.T01:intron 20.0%
!!! CAATAAGTTGAATAATTTCA+GGG + Chr7:15615678-15615697 MsG0780036881.01.T01:intron 20.0%
!!! GTGATTGTTTTCTTTTTATT+TGG + Chr7:15614605-15614624 MsG0780036881.01.T01:intron 20.0%
!!! TAAATCATCATATTCAAGTT+GGG + Chr7:15612463-15612482 MsG0780036881.01.T01:intron 20.0%
!!! TAAATTTTTTGTAATCCAAG+TGG + Chr7:15612990-15613009 MsG0780036881.01.T01:intron 20.0%
!!! TAAGTTATTTTGAGTTTAAG+TGG + Chr7:15612227-15612246 MsG0780036881.01.T01:intron 20.0%
!!! TCAATAAGTTGAATAATTTC+AGG + Chr7:15615677-15615696 MsG0780036881.01.T01:intron 20.0%
!!! TTTTTCCTATTTTTACTGTA+TGG - Chr7:15616790-15616809 None:intergenic 20.0%
! AAATATCCAACCAAATTTGT+TGG + Chr7:15614345-15614364 MsG0780036881.01.T01:CDS 25.0%
! AACCATTAGAAAAGATATAG+AGG + Chr7:15612826-15612845 MsG0780036881.01.T01:intron 25.0%
! AACTTCCATACAGTAAAAAT+AGG + Chr7:15616782-15616801 MsG0780036881.01.T01:intron 25.0%
! AAGTGATTTGAATGTAAAAG+TGG - Chr7:15615297-15615316 None:intergenic 25.0%
! AATCTATACGAATGAAAACA+GGG - Chr7:15613625-15613644 None:intergenic 25.0%
! AATTGTGTATACAGTAAACT+AGG + Chr7:15617376-15617395 MsG0780036881.01.T01:three_prime_UTR 25.0%
! ATATAAATGCATGTTTGGAA+TGG - Chr7:15614944-15614963 None:intergenic 25.0%
! ATTAATTTAACTGACGAAGT+AGG + Chr7:15615554-15615573 MsG0780036881.01.T01:intron 25.0%
! CAATAGTAAAAATTGTGATG+CGG - Chr7:15613483-15613502 None:intergenic 25.0%
! CTGAACTTATTCATAAGAAA+AGG - Chr7:15615050-15615069 None:intergenic 25.0%
! CTTATAGGCTTCATTATTTA+AGG - Chr7:15616449-15616468 None:intergenic 25.0%
! GAAAAATCAAACCAAAACTA+AGG - Chr7:15617074-15617093 None:intergenic 25.0%
! GACATTTCAGTATTATCTAA+CGG - Chr7:15614201-15614220 None:intergenic 25.0%
! GAGACAAAATCATTCAAAAA+TGG - Chr7:15613368-15613387 None:intergenic 25.0%
! TAATCTATACGAATGAAAAC+AGG - Chr7:15613626-15613645 None:intergenic 25.0%
! TAGATTTGTGTTATGTATCA+TGG + Chr7:15613715-15613734 MsG0780036881.01.T01:intron 25.0%
! TATTAGCAGAAGTTATAACT+CGG + Chr7:15617334-15617353 MsG0780036881.01.T01:three_prime_UTR 25.0%
! TGATTGTCTCAAATTAATAC+CGG + Chr7:15616571-15616590 MsG0780036881.01.T01:intron 25.0%
! TGGATTGAACAATAAATTCA+AGG - Chr7:15615277-15615296 None:intergenic 25.0%
! TTAATAAGATCGAATCAATC+TGG + Chr7:15613027-15613046 MsG0780036881.01.T01:intron 25.0%
! TTATTCATAAGAAAAGGTCT+TGG - Chr7:15615044-15615063 None:intergenic 25.0%
! TTCTTATGAATAAGTTCAGA+TGG + Chr7:15615051-15615070 MsG0780036881.01.T01:intron 25.0%
! TTGTGCTTATTTAGATTGAT+GGG + Chr7:15614826-15614845 MsG0780036881.01.T01:intron 25.0%
! TTTACTGTATACACAATTTG+AGG - Chr7:15617374-15617393 None:intergenic 25.0%
!! AATAAACAATGTTTGAGGTT+TGG - Chr7:15612161-15612180 None:intergenic 25.0%
!! AGGAAAGACAATTTTCAAAA+GGG + Chr7:15615163-15615182 MsG0780036881.01.T01:CDS 25.0%
!! AGTTGATATAAATGCATGTT+TGG - Chr7:15614949-15614968 None:intergenic 25.0%
!! ATAGTTTGTGATACTTATTC+TGG + Chr7:15613412-15613431 MsG0780036881.01.T01:intron 25.0%
!! ATTCATATAAATTTGTTCGC+TGG + Chr7:15614308-15614327 MsG0780036881.01.T01:intron 25.0%
!! TAGGAAAGACAATTTTCAAA+AGG + Chr7:15615162-15615181 MsG0780036881.01.T01:CDS 25.0%
!! TCACTGATTAAAACAATCTT+TGG + Chr7:15612299-15612318 MsG0780036881.01.T01:intron 25.0%
!! TTTTGCATTCTTTCTTTCAA+AGG + Chr7:15615805-15615824 MsG0780036881.01.T01:intron 25.0%
!!! AATGTTGTCACTTTCATTTA+AGG + Chr7:15613444-15613463 MsG0780036881.01.T01:intron 25.0%
!!! CTCTTGTTATGATTTTGATA+AGG + Chr7:15613193-15613212 MsG0780036881.01.T01:intron 25.0%
!!! GAAAACAGGGTTTTAAATAA+AGG - Chr7:15613612-15613631 None:intergenic 25.0%
!!! GTTTTCTTTTTATTTGGCTT+AGG + Chr7:15614611-15614630 MsG0780036881.01.T01:intron 25.0%
!!! GTTTTGGTTTTTGAACATTA+AGG + Chr7:15613252-15613271 MsG0780036881.01.T01:intron 25.0%
AAAACAAAAAAGGTCAATGC+TGG - Chr7:15613237-15613256 None:intergenic 30.0%
AAAAGACGAAAATACAAACC+TGG - Chr7:15613342-15613361 None:intergenic 30.0%
AACTTTCCTTTCAACTTAAG+TGG - Chr7:15612537-15612556 None:intergenic 30.0%
AAGACAACAACCAACAAATT+TGG - Chr7:15614358-15614377 None:intergenic 30.0%
AATAACTATTAGTTCCAGCA+TGG - Chr7:15614288-15614307 None:intergenic 30.0%
AATATACTGAAAGCAGCTTA+TGG + Chr7:15614064-15614083 MsG0780036881.01.T01:intron 30.0%
ACGAATAAACATCATAGGAA+GGG + Chr7:15614972-15614991 MsG0780036881.01.T01:intron 30.0%
ACTAATAGGGACTAATCAAA+CGG - Chr7:15615460-15615479 None:intergenic 30.0%
ACTACAATTAGAATGTCTTC+AGG + Chr7:15612007-15612026 MsG0780036881.01.T01:CDS 30.0%
AGATTGCAATTACTTTGGTA+AGG - Chr7:15616408-15616427 None:intergenic 30.0%
ATCAATACTTTCTCACAGTT+TGG + Chr7:15612119-15612138 MsG0780036881.01.T01:intron 30.0%
ATCTACATTTCCTGGTAAAT+TGG - Chr7:15613311-15613330 None:intergenic 30.0%
ATTTAGATTGATGGGGAATT+TGG + Chr7:15614834-15614853 MsG0780036881.01.T01:intron 30.0%
CCTAAAATCCTAACTGTTTA+AGG + Chr7:15613670-15613689 MsG0780036881.01.T01:intron 30.0%
CTTACACGAATAAACATCAT+AGG + Chr7:15614967-15614986 MsG0780036881.01.T01:intron 30.0%
GAATGCAAAATAGCTTACAA+TGG - Chr7:15615795-15615814 None:intergenic 30.0%
GACAAAAAATTGATCCAGAA+AGG - Chr7:15615099-15615118 None:intergenic 30.0%
GATAATACTGAAATGTCAGT+AGG + Chr7:15614204-15614223 MsG0780036881.01.T01:intron 30.0%
GTTCCAACAAATGTAAACAA+GGG - Chr7:15615653-15615672 None:intergenic 30.0%
GTTGTGCTTATTTAGATTGA+TGG + Chr7:15614825-15614844 MsG0780036881.01.T01:intron 30.0%
GTTTCTCTTATAGTTATGCT+AGG - Chr7:15612809-15612828 None:intergenic 30.0%
TACAACTGAAACTGAAAGTA+CGG - Chr7:15611918-15611937 None:intergenic 30.0%
TACGTGTATTAGTGTCTTAT+CGG - Chr7:15614463-15614482 None:intergenic 30.0%
TAGATGTGAATCAATGACTT+TGG - Chr7:15612062-15612081 None:intergenic 30.0%
TATGAATAAGTTCAGATGGA+AGG + Chr7:15615055-15615074 MsG0780036881.01.T01:intron 30.0%
TCAAATAAGTCAACCAAAAG+AGG + Chr7:15614157-15614176 MsG0780036881.01.T01:intron 30.0%
TCAATGGTTTAAGCTACATT+TGG + Chr7:15613896-15613915 MsG0780036881.01.T01:intron 30.0%
TCATTTGACATAATGAAGCA+CGG - Chr7:15616165-15616184 None:intergenic 30.0%
TCTACATTTCCTGGTAAATT+GGG - Chr7:15613310-15613329 None:intergenic 30.0%
TGGTTTATGATAGAACACTA+TGG + Chr7:15612870-15612889 MsG0780036881.01.T01:intron 30.0%
TGTGCTTATTTAGATTGATG+GGG + Chr7:15614827-15614846 MsG0780036881.01.T01:intron 30.0%
TGTTCCAACAAATGTAAACA+AGG - Chr7:15615654-15615673 None:intergenic 30.0%
TTCAGTGTAATTACAAGTGT+TGG - Chr7:15616073-15616092 None:intergenic 30.0%
TTCGAGCTTCTATAAAATTG+CGG - Chr7:15617118-15617137 None:intergenic 30.0%
TTGATCATAGTTATGTCACA+AGG + Chr7:15613821-15613840 MsG0780036881.01.T01:CDS 30.0%
TTGCAGATGACAAATGAAAT+AGG + Chr7:15615143-15615162 MsG0780036881.01.T01:intron 30.0%
TTTAATCAGTGATGAAACCA+AGG - Chr7:15612291-15612310 None:intergenic 30.0%
! AGGAGAAAAGGTTTAAGTTT+AGG + Chr7:15615574-15615593 MsG0780036881.01.T01:intron 30.0%
! CCTTAAACAGTTAGGATTTT+AGG - Chr7:15613673-15613692 None:intergenic 30.0%
! CTTATAATCAAAGGCATGTA+TGG + Chr7:15616494-15616513 MsG0780036881.01.T01:intron 30.0%
! GACATATATCAGTTTGTTCA+TGG + Chr7:15614710-15614729 MsG0780036881.01.T01:intron 30.0%
! GACCTCTATATCTTTTCTAA+TGG - Chr7:15612831-15612850 None:intergenic 30.0%
! GGAGAAAAGGTTTAAGTTTA+GGG + Chr7:15615575-15615594 MsG0780036881.01.T01:intron 30.0%
! GTACTGACACTTATAATCAA+AGG + Chr7:15616485-15616504 MsG0780036881.01.T01:intron 30.0%
! GTTTTTGCTAAAAGTTACAG+TGG - Chr7:15614875-15614894 None:intergenic 30.0%
! TTAGATTCAACCCTTATTTG+TGG + Chr7:15614649-15614668 MsG0780036881.01.T01:CDS 30.0%
! TTCTCAAATCATTGCTATTG+TGG + Chr7:15616335-15616354 MsG0780036881.01.T01:intron 30.0%
!! AAAGTACCACTTAAGTTGAA+AGG + Chr7:15612528-15612547 MsG0780036881.01.T01:CDS 30.0%
!! ACAAAGTTCTGAATGCTTAT+AGG - Chr7:15616464-15616483 None:intergenic 30.0%
!! ATGTTTTTGTTACCTCTTGA+GGG - Chr7:15612099-15612118 None:intergenic 30.0%
!! TATGTTTTTGTTACCTCTTG+AGG - Chr7:15612100-15612119 None:intergenic 30.0%
!! TCTTTTTATTTGGCTTAGGA+TGG + Chr7:15614615-15614634 MsG0780036881.01.T01:intron 30.0%
!!! AGCATTGACCTTTTTTGTTT+TGG + Chr7:15613236-15613255 MsG0780036881.01.T01:intron 30.0%
!!! TTCATTTTTTCCCCATTTGA+TGG + Chr7:15613864-15613883 MsG0780036881.01.T01:intron 30.0%
!!! TTTTTTGTAATCCAAGTGGT+TGG + Chr7:15612994-15613013 MsG0780036881.01.T01:intron 30.0%
AAACATCATAGGAAGGGAAT+TGG + Chr7:15614978-15614997 MsG0780036881.01.T01:intron 35.0%
AAAGAAGATGCAAGTGTGTT+TGG - Chr7:15615359-15615378 None:intergenic 35.0%
AAGAACACCATTTCCTTATC+TGG + Chr7:15616693-15616712 MsG0780036881.01.T01:CDS 35.0%
ACTATGTTGCAGAAATGATG+AGG + Chr7:15615853-15615872 MsG0780036881.01.T01:intron 35.0%
AGCAGAAAATCTACATTTCC+TGG - Chr7:15613319-15613338 None:intergenic 35.0%
AGTTGTATTGCTTGATCACT+TGG + Chr7:15615755-15615774 MsG0780036881.01.T01:CDS 35.0%
ATCCACTCTAAATCAGAAGA+AGG - Chr7:15616957-15616976 None:intergenic 35.0%
ATGTGAATCAATGACTTTGG+AGG - Chr7:15612059-15612078 None:intergenic 35.0%
CAACAACCAACAAATTTGGT+TGG - Chr7:15614354-15614373 None:intergenic 35.0%
CACATTCAGGAACAACAAAT+GGG - Chr7:15616881-15616900 None:intergenic 35.0%
CACGAATAAACATCATAGGA+AGG + Chr7:15614971-15614990 MsG0780036881.01.T01:intron 35.0%
CATGTATTTGTATTCCATGC+TGG + Chr7:15614271-15614290 MsG0780036881.01.T01:intron 35.0%
CCTTAAACCTCTAGTTACTA+GGG - Chr7:15613141-15613160 None:intergenic 35.0%
CGAATTAAACTAGTGAACCT+TGG + Chr7:15612271-15612290 MsG0780036881.01.T01:intron 35.0%
CTTAAACCTCTAGTTACTAG+GGG - Chr7:15613140-15613159 None:intergenic 35.0%
GACAAATCCAGATAAGGAAA+TGG - Chr7:15616703-15616722 None:intergenic 35.0%
GATGTGTCAGTATTGTATCT+GGG + Chr7:15616357-15616376 MsG0780036881.01.T01:intron 35.0%
GATTAGGAATGACACCATTA+GGG + Chr7:15612695-15612714 MsG0780036881.01.T01:intron 35.0%
GTTTGAACATCTTGTTCTCA+AGG + Chr7:15614413-15614432 MsG0780036881.01.T01:CDS 35.0%
TAACTGTTTGAGAGAGTTTG+TGG - Chr7:15614110-15614129 None:intergenic 35.0%
TAATTCGAAGTTCAGTTGAG+AGG - Chr7:15613104-15613123 None:intergenic 35.0%
TACGTACAAATCATTGTTCG+AGG + Chr7:15611936-15611955 MsG0780036881.01.T01:CDS 35.0%
TAGGCTTCATTATTTAAGGG+CGG - Chr7:15616445-15616464 None:intergenic 35.0%
TCAAGCAATACAACTGTAGA+TGG - Chr7:15615750-15615769 None:intergenic 35.0%
TCTAAATCAGAAGAAGGCAA+AGG - Chr7:15616951-15616970 None:intergenic 35.0%
TGATTCACATCTACACGTTT+GGG + Chr7:15612069-15612088 MsG0780036881.01.T01:CDS 35.0%
TGCAAAATAGCTTACAATGG+TGG - Chr7:15615792-15615811 None:intergenic 35.0%
TGTGCACAATTGCTCAATTT+CGG - Chr7:15615721-15615740 None:intergenic 35.0%
TTATATCTTGGCTGAGATTG+TGG + Chr7:15613579-15613598 MsG0780036881.01.T01:intron 35.0%
TTGATTCACATCTACACGTT+TGG + Chr7:15612068-15612087 MsG0780036881.01.T01:CDS 35.0%
! AAATGTAGATTTTCTGCTCC+AGG + Chr7:15613321-15613340 MsG0780036881.01.T01:intron 35.0%
! AAGACAATTTTCAAAAGGGC+TGG + Chr7:15615167-15615186 MsG0780036881.01.T01:CDS 35.0%
! AGACAATTTTCAAAAGGGCT+GGG + Chr7:15615168-15615187 MsG0780036881.01.T01:CDS 35.0%
! AGTTTTTCGTCCATCAAATG+GGG - Chr7:15613877-15613896 None:intergenic 35.0%
! CAACGAGTTGGATTCAAATA+TGG + Chr7:15612850-15612869 MsG0780036881.01.T01:intron 35.0%
! CTAAGTAGCCTTAAACAGTT+AGG - Chr7:15613681-15613700 None:intergenic 35.0%
! GAGTTTTTCGTCCATCAAAT+GGG - Chr7:15613878-15613897 None:intergenic 35.0%
! GCTAGACTTTATTTAGCTTC+CGG + Chr7:15612321-15612340 MsG0780036881.01.T01:intron 35.0%
! GTGTCATTGCTTCATAGATT+AGG + Chr7:15616606-15616625 MsG0780036881.01.T01:intron 35.0%
! TAAATGCATGTTTGGAATGG+CGG - Chr7:15614941-15614960 None:intergenic 35.0%
! TACCAAACTTTTGCAGCTTA+TGG + Chr7:15613747-15613766 MsG0780036881.01.T01:CDS 35.0%
! TCTGATTTAGAGTGGATCAT+GGG + Chr7:15616960-15616979 MsG0780036881.01.T01:CDS 35.0%
! TGAGTTTTTCGTCCATCAAA+TGG - Chr7:15613879-15613898 None:intergenic 35.0%
! TTACAATGGTGGTTTGCAAA+AGG - Chr7:15615781-15615800 None:intergenic 35.0%
! TTCTGATTTAGAGTGGATCA+TGG + Chr7:15616959-15616978 MsG0780036881.01.T01:CDS 35.0%
! TTGATGGACGAAAAACTCAA+TGG + Chr7:15613880-15613899 MsG0780036881.01.T01:intron 35.0%
!! ATCATCATATTCAAGTTGGG+TGG + Chr7:15612466-15612485 MsG0780036881.01.T01:intron 35.0%
!! TGTTTTTGTTACCTCTTGAG+GGG - Chr7:15612098-15612117 None:intergenic 35.0%
!!! CTTGTTTTGAGGAAGAAAGT+AGG - Chr7:15615382-15615401 None:intergenic 35.0%
AACTGACGAAGTAGGAGAAA+AGG + Chr7:15615562-15615581 MsG0780036881.01.T01:intron 40.0%
AAGGGTTGAATCTAACAGCA+CGG - Chr7:15614644-15614663 None:intergenic 40.0%
AAGTTTAGGGACGAAATTCG+TGG + Chr7:15615588-15615607 MsG0780036881.01.T01:intron 40.0%
AATAAGCTGCACTGCTTCTT+TGG - Chr7:15616916-15616935 None:intergenic 40.0%
ACCAAAGCTAGAGACAAGTT+GGG - Chr7:15616737-15616756 None:intergenic 40.0%
AGACATAACACCAACACATG+TGG + Chr7:15616292-15616311 MsG0780036881.01.T01:intron 40.0%
AGAGGAGACAAATCCAGATA+AGG - Chr7:15616709-15616728 None:intergenic 40.0%
AGATATAGAGGTCAACGAGT+TGG + Chr7:15612838-15612857 MsG0780036881.01.T01:intron 40.0%
AGATGGAAGGATACTTTGCA+AGG + Chr7:15615068-15615087 MsG0780036881.01.T01:intron 40.0%
AGCAAGATTCTGATTGAGGT+TGG + Chr7:15617027-15617046 MsG0780036881.01.T01:exon 40.0%
ATCATAGGAAGGGAATTGGT+AGG + Chr7:15614982-15615001 MsG0780036881.01.T01:intron 40.0%
ATGACACTAAACGTCAACAC+CGG - Chr7:15616593-15616612 None:intergenic 40.0%
ATGGCGTAATTTGATCCATG+TGG + Chr7:15612889-15612908 MsG0780036881.01.T01:intron 40.0%
CAGATTTCAATCTTCAAGCC+CGG - Chr7:15615021-15615040 None:intergenic 40.0%
CAGTGACAAGTGTAGAAGTT+TGG - Chr7:15617142-15617161 None:intergenic 40.0%
CCAACAAATGTAAACAAGGG+TGG - Chr7:15615650-15615669 None:intergenic 40.0%
CCACATTCAGGAACAACAAA+TGG - Chr7:15616882-15616901 None:intergenic 40.0%
CCCTAGTAACTAGAGGTTTA+AGG + Chr7:15613138-15613157 MsG0780036881.01.T01:intron 40.0%
CGTATGAAGAGTAGATCAGA+CGG + Chr7:15612751-15612770 MsG0780036881.01.T01:intron 40.0%
CTCCATAAGCTGCAAAAGTT+TGG - Chr7:15613752-15613771 None:intergenic 40.0%
CTGAAACTGAAACTGAACGT+GGG - Chr7:15611965-15611984 None:intergenic 40.0%
CTGATCTACTCTTCATACGA+CGG - Chr7:15612750-15612769 None:intergenic 40.0%
GAAATGTCAGTAGGTGAAGA+TGG + Chr7:15614213-15614232 MsG0780036881.01.T01:intron 40.0%
GATGGAAGGATACTTTGCAA+GGG + Chr7:15615069-15615088 MsG0780036881.01.T01:intron 40.0%
GCAAGATTCTGATTGAGGTT+GGG + Chr7:15617028-15617047 MsG0780036881.01.T01:exon 40.0%
GCCTTAAACCTCTAGTTACT+AGG - Chr7:15613142-15613161 None:intergenic 40.0%
GCTAAGCAAGATTCTGATTG+AGG + Chr7:15617023-15617042 MsG0780036881.01.T01:CDS 40.0%
GGATGTGTCAGTATTGTATC+TGG + Chr7:15616356-15616375 MsG0780036881.01.T01:intron 40.0%
GGATTAGGAATGACACCATT+AGG + Chr7:15612694-15612713 MsG0780036881.01.T01:intron 40.0%
GGTAGGACTTTCTTAATTGC+CGG + Chr7:15614999-15615018 MsG0780036881.01.T01:intron 40.0%
GTAGGACTTTCTTAATTGCC+GGG + Chr7:15615000-15615019 MsG0780036881.01.T01:intron 40.0%
GTATGGTATTTGACACGTGT+TGG + Chr7:15616511-15616530 MsG0780036881.01.T01:intron 40.0%
GTGAATTGACGGAATCATTG+TGG - Chr7:15614919-15614938 None:intergenic 40.0%
GTTATGTATCATGGATGCTG+TGG + Chr7:15613724-15613743 MsG0780036881.01.T01:CDS 40.0%
GTTCCTGAATGTGGATACAA+AGG + Chr7:15616888-15616907 MsG0780036881.01.T01:CDS 40.0%
GTTGAGAGGTAAGTACATTC+TGG - Chr7:15613090-15613109 None:intergenic 40.0%
TCATACGACGGTATCTCTAT+AGG - Chr7:15612738-15612757 None:intergenic 40.0%
TCATGGTTTCTCATGAAGCA+CGG + Chr7:15615984-15616003 MsG0780036881.01.T01:intron 40.0%
TGAGGGTAAAACTGCTTAAC+TGG + Chr7:15617277-15617296 MsG0780036881.01.T01:three_prime_UTR 40.0%
TGCCTTCTTCTGATTTAGAG+TGG + Chr7:15616952-15616971 MsG0780036881.01.T01:CDS 40.0%
TGGAGGTTGAAGAAGTTGAA+GGG - Chr7:15612042-15612061 None:intergenic 40.0%
TGTTGCAGAAATGATGAGGA+AGG + Chr7:15615857-15615876 MsG0780036881.01.T01:intron 40.0%
TGTTGTATGGTACGAAGTGT+TGG + Chr7:15612583-15612602 MsG0780036881.01.T01:CDS 40.0%
TTCGTACCATACAACATCAC+CGG - Chr7:15612579-15612598 None:intergenic 40.0%
TTGAAATAGAGAAGAGCCTC+AGG + Chr7:15612489-15612508 MsG0780036881.01.T01:intron 40.0%
TTGAATGTGACCACATGTGT+TGG - Chr7:15616305-15616324 None:intergenic 40.0%
TTGAATGTGATCGCACATCT+TGG - Chr7:15616546-15616565 None:intergenic 40.0%
TTGCAGTTGCGTTTCAGTTT+CGG + Chr7:15613541-15613560 MsG0780036881.01.T01:intron 40.0%
TTGGAGGTTGAAGAAGTTGA+AGG - Chr7:15612043-15612062 None:intergenic 40.0%
! AGTTGGCTTCATGTGTATGA+AGG + Chr7:15615205-15615224 MsG0780036881.01.T01:CDS 40.0%
! CAAACTTTTGCAGCTTATGG+AGG + Chr7:15613750-15613769 MsG0780036881.01.T01:CDS 40.0%
! CCACCCTTGTTTACATTTGT+TGG + Chr7:15615647-15615666 MsG0780036881.01.T01:intron 40.0%
! GACAATTTTCAAAAGGGCTG+GGG + Chr7:15615169-15615188 MsG0780036881.01.T01:CDS 40.0%
! GTTGTATGGTACGAAGTGTT+GGG + Chr7:15612584-15612603 MsG0780036881.01.T01:CDS 40.0%
! TCTGAAACTGAAACTGAACG+TGG - Chr7:15611966-15611985 None:intergenic 40.0%
! TGGTGCTAATCGTGTAATGT+GGG + Chr7:15616753-15616772 MsG0780036881.01.T01:CDS 40.0%
! TGTCAGAGAACATCTTTTCG+AGG + Chr7:15617254-15617273 MsG0780036881.01.T01:three_prime_UTR 40.0%
!! AGAACATCTTTTCGAGGTGA+GGG + Chr7:15617260-15617279 MsG0780036881.01.T01:three_prime_UTR 40.0%
!! CCATTTGTTGTTCCTGAATG+TGG + Chr7:15616879-15616898 MsG0780036881.01.T01:CDS 40.0%
!! TTGGTGCTAATCGTGTAATG+TGG + Chr7:15616752-15616771 MsG0780036881.01.T01:CDS 40.0%
AAAACTAAGGCTCGACCAAG+AGG - Chr7:15617061-15617080 None:intergenic 45.0%
AACTAGGCAGTTGAGCGTAA+CGG + Chr7:15617392-15617411 MsG0780036881.01.T01:three_prime_UTR 45.0%
ACCACTTTAGTCCAACCACT+TGG - Chr7:15613008-15613027 None:intergenic 45.0%
ACCTCTAGTTACTAGGGGAA+AGG - Chr7:15613135-15613154 None:intergenic 45.0%
AGACTAGACGGGATAGGATT+AGG + Chr7:15612679-15612698 MsG0780036881.01.T01:intron 45.0%
AGCAGAAGTTATAACTCGGC+AGG + Chr7:15617338-15617357 MsG0780036881.01.T01:three_prime_UTR 45.0%
AGGCATGCTTGACTTACTTG+TGG - Chr7:15615920-15615939 None:intergenic 45.0%
AGGTAAGTACATTCTGGCCA+AGG - Chr7:15613084-15613103 None:intergenic 45.0%
AGGTTGGGAATGTTACCTCT+TGG + Chr7:15617043-15617062 MsG0780036881.01.T01:exon 45.0%
AGTAAATTCCCCTACTCTCC+TGG + Chr7:15613277-15613296 MsG0780036881.01.T01:intron 45.0%
AGTCAACCAAAAGAGGCCTT+TGG + Chr7:15614164-15614183 MsG0780036881.01.T01:intron 45.0%
AGTCAGGTCAAAAGAGGTAG+AGG + Chr7:15612779-15612798 MsG0780036881.01.T01:intron 45.0%
ATGAAGAGTAGATCAGACGG+AGG + Chr7:15612754-15612773 MsG0780036881.01.T01:intron 45.0%
CACCAAAGCTAGAGACAAGT+TGG - Chr7:15616738-15616757 None:intergenic 45.0%
CACCAGATGGCCACAAATAA+GGG - Chr7:15614662-15614681 None:intergenic 45.0%
CATGTGGTTACCACGAGAAA+GGG - Chr7:15612367-15612386 None:intergenic 45.0%
CCAATACTCCAGAATTTGGC+CGG - Chr7:15612343-15612362 None:intergenic 45.0%
CCTCTAGTTACTAGGGGAAA+GGG - Chr7:15613134-15613153 None:intergenic 45.0%
CGTGGTAACCACATGGTTAA+GGG + Chr7:15612372-15612391 MsG0780036881.01.T01:intron 45.0%
CTTATCACTCGAAACACCTG+AGG - Chr7:15612508-15612527 None:intergenic 45.0%
CTTGCTAATCCAGCTGATGA+TGG + Chr7:15614375-15614394 MsG0780036881.01.T01:CDS 45.0%
GAACCAAGTAAGTCATGCAG+CGG + Chr7:15612626-15612645 MsG0780036881.01.T01:intron 45.0%
GACATAATGAAGCACGGACA+CGG - Chr7:15616159-15616178 None:intergenic 45.0%
GCTCCTTTGTATCCACATTC+AGG - Chr7:15616894-15616913 None:intergenic 45.0%
GGCATGCTTGACTTACTTGT+GGG - Chr7:15615919-15615938 None:intergenic 45.0%
GGTGCTAATCGTGTAATGTG+GGG + Chr7:15616754-15616773 MsG0780036881.01.T01:CDS 45.0%
GTGGTAACCACATGGTTAAG+GGG + Chr7:15612373-15612392 MsG0780036881.01.T01:intron 45.0%
TCACCAGATGGCCACAAATA+AGG - Chr7:15614663-15614682 None:intergenic 45.0%
TCCAAGTGGTTGGACTAAAG+TGG + Chr7:15613004-15613023 MsG0780036881.01.T01:intron 45.0%
TCGTGGTAACCACATGGTTA+AGG + Chr7:15612371-15612390 MsG0780036881.01.T01:intron 45.0%
TGGTAACCACATGGTTAAGG+GGG + Chr7:15612374-15612393 MsG0780036881.01.T01:intron 45.0%
TGTCATGTTCGTGTCTTCGA+TGG + Chr7:15614543-15614562 MsG0780036881.01.T01:intron 45.0%
TTGGAATGGCGGTGAATTGA+CGG - Chr7:15614930-15614949 None:intergenic 45.0%
TTTGCAAGGGAAGACCTTTC+TGG + Chr7:15615082-15615101 MsG0780036881.01.T01:intron 45.0%
TTTGTGGCCATCTGGTGAAA+AGG + Chr7:15614665-15614684 MsG0780036881.01.T01:CDS 45.0%
! AACCCTTATTTGTGGCCATC+TGG + Chr7:15614657-15614676 MsG0780036881.01.T01:CDS 45.0%
! AAGCCTTATCCCACTAAACG+GGG - Chr7:15612919-15612938 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAAC+GGG - Chr7:15612920-15612939 None:intergenic 45.0%
! CCAAGCCTTATCCCACTAAA+CGG - Chr7:15612921-15612940 None:intergenic 45.0%
! GACTTACTTGGTTCTCGTGT+TGG - Chr7:15612620-15612639 None:intergenic 45.0%
! TCCCAACTTGTCTCTAGCTT+TGG + Chr7:15616733-15616752 MsG0780036881.01.T01:CDS 45.0%
! TCTTGGTCGAGCCTTAGTTT+TGG + Chr7:15617060-15617079 MsG0780036881.01.T01:three_prime_UTR 45.0%
! TTGCCTACCTTTTCACCAGA+TGG - Chr7:15614675-15614694 None:intergenic 45.0%
! TTTAGCTTCCGGCCAAATTC+TGG + Chr7:15612332-15612351 MsG0780036881.01.T01:intron 45.0%
!! AAAGCACCAAAGGCCTCTTT+TGG - Chr7:15614173-15614192 None:intergenic 45.0%
!! AACGGCAACAAAAGCACCAA+AGG - Chr7:15614183-15614202 None:intergenic 45.0%
!! AATCCAGCTGATGATGGAAG+CGG + Chr7:15614381-15614400 MsG0780036881.01.T01:CDS 45.0%
!! CGGCCAAATTCTGGAGTATT+GGG + Chr7:15612341-15612360 MsG0780036881.01.T01:intron 45.0%
!! GAGAACATCTTTTCGAGGTG+AGG + Chr7:15617259-15617278 MsG0780036881.01.T01:three_prime_UTR 45.0%
ACACCATTAGGGAGAGAGTG+AGG + Chr7:15612706-15612725 MsG0780036881.01.T01:intron 50.0%
ATCCGACCAGGATCGAACTT+GGG - Chr7:15613057-15613076 None:intergenic 50.0%
ATGGAGGAAGCAGGAGTAGA+TGG + Chr7:15613766-15613785 MsG0780036881.01.T01:CDS 50.0%
CACCATTAGGGAGAGAGTGA+GGG + Chr7:15612707-15612726 MsG0780036881.01.T01:intron 50.0%
CACCGAACACGCTTTCAATC+TGG - Chr7:15616264-15616283 None:intergenic 50.0%
CCATGTGGTTACCACGAGAA+AGG - Chr7:15612368-15612387 None:intergenic 50.0%
CCCTTTCCCCTAGTAACTAG+AGG + Chr7:15613131-15613150 MsG0780036881.01.T01:intron 50.0%
CCGTTTAGTGGGATAAGGCT+TGG + Chr7:15612918-15612937 MsG0780036881.01.T01:intron 50.0%
CCTTTCTCGTGGTAACCACA+TGG + Chr7:15612365-15612384 MsG0780036881.01.T01:intron 50.0%
CTAATCGTGTAATGTGGGGC+AGG + Chr7:15616758-15616777 MsG0780036881.01.T01:CDS 50.0%
CTCAGACCGGTGATGTTGTA+TGG + Chr7:15612570-15612589 MsG0780036881.01.T01:CDS 50.0%
CTTATCCCACTAAACGGGGT+CGG - Chr7:15612915-15612934 None:intergenic 50.0%
CTTGCTTAGCAGCAGTCAAC+TGG - Chr7:15617013-15617032 None:intergenic 50.0%
GAGGAGAGTCAGGTCAAAAG+AGG + Chr7:15612773-15612792 MsG0780036881.01.T01:intron 50.0%
GATGAGCGGTAAGACTAGAC+GGG + Chr7:15612668-15612687 MsG0780036881.01.T01:intron 50.0%
GGACAAGAGCCCAATTTACC+AGG + Chr7:15613298-15613317 MsG0780036881.01.T01:intron 50.0%
GGATGAGCGGTAAGACTAGA+CGG + Chr7:15612667-15612686 MsG0780036881.01.T01:intron 50.0%
GGGCCCAATACTCCAGAATT+TGG - Chr7:15612347-15612366 None:intergenic 50.0%
GGGGAACTCAATGTAGCAGT+TGG + Chr7:15615188-15615207 MsG0780036881.01.T01:CDS 50.0%
GGTAAATTGGGCTCTTGTCC+AGG - Chr7:15613298-15613317 None:intergenic 50.0%
TAAGTCATGCAGCGGAGATG+AGG + Chr7:15612634-15612653 MsG0780036881.01.T01:intron 50.0%
TACCCTCACTCTCTCCCTAA+TGG - Chr7:15612712-15612731 None:intergenic 50.0%
TACTTGCCCCCTTAACCATG+TGG - Chr7:15612383-15612402 None:intergenic 50.0%
TCTCCGCTGCATGACTTACT+TGG - Chr7:15612632-15612651 None:intergenic 50.0%
TGGCCATCTGGTGAAAAGGT+AGG + Chr7:15614669-15614688 MsG0780036881.01.T01:intron 50.0%
TGTTGTGTCAGACACCGACA+CGG + Chr7:15616045-15616064 MsG0780036881.01.T01:CDS 50.0%
TTGCAGCTTATGGAGGAAGC+AGG + Chr7:15613757-15613776 MsG0780036881.01.T01:CDS 50.0%
! CGCCAGATTGAAAGCGTGTT+CGG + Chr7:15616259-15616278 MsG0780036881.01.T01:intron 50.0%
! GAGACAAGTTGGGACAAGAG+AGG - Chr7:15616727-15616746 None:intergenic 50.0%
! GTGATCGCACATCTTGGTGT+CGG - Chr7:15616540-15616559 None:intergenic 50.0%
! TTGAGCGTAACGGAGTGGAA+AGG + Chr7:15617402-15617421 MsG0780036881.01.T01:three_prime_UTR 50.0%
!! ATCCAGCTGATGATGGAAGC+GGG + Chr7:15614382-15614401 MsG0780036881.01.T01:CDS 50.0%
!! CCGGCCAAATTCTGGAGTAT+TGG + Chr7:15612340-15612359 MsG0780036881.01.T01:intron 50.0%
!! GTATGGTACGAAGTGTTGGG+CGG + Chr7:15612587-15612606 MsG0780036881.01.T01:CDS 50.0%
!! TACAAGTGTTGGTGCCGTGT+CGG - Chr7:15616062-15616081 None:intergenic 50.0%
ACACAACACGTGTCCGACAC+CGG - Chr7:15616033-15616052 None:intergenic 55.0%
AGATCAGACGGAGGAGAGTC+AGG + Chr7:15612763-15612782 MsG0780036881.01.T01:intron 55.0%
AGGATGTTGCGCTGGATGAG+CGG + Chr7:15612654-15612673 MsG0780036881.01.T01:intron 55.0%
ATCCTGGTCGGATCGTTCCT+TGG + Chr7:15613064-15613083 MsG0780036881.01.T01:intron 55.0%
ATGAAGCACGGACACGGACA+CGG - Chr7:15616153-15616172 None:intergenic 55.0%
CACCCAAGTTCGATCCTGGT+CGG + Chr7:15613052-15613071 MsG0780036881.01.T01:intron 55.0%
CATGAAGCACGGACACTCCT+CGG + Chr7:15615995-15616014 MsG0780036881.01.T01:intron 55.0%
CGACCCCGTTTAGTGGGATA+AGG + Chr7:15612913-15612932 MsG0780036881.01.T01:intron 55.0%
CTATCGTGCAGCACTCAGAC+CGG + Chr7:15612557-15612576 MsG0780036881.01.T01:CDS 55.0%
GATCCGACCAGGATCGAACT+TGG - Chr7:15613058-15613077 None:intergenic 55.0%
GCGGTAAGACTAGACGGGAT+AGG + Chr7:15612673-15612692 MsG0780036881.01.T01:intron 55.0%
GCTCTTGTCCAGGAGAGTAG+GGG - Chr7:15613288-15613307 None:intergenic 55.0%
GGCTCTTGTCCAGGAGAGTA+GGG - Chr7:15613289-15613308 None:intergenic 55.0%
!! GAGTATTGGGCCCTTTCTCG+TGG + Chr7:15612354-15612373 MsG0780036881.01.T01:intron 55.0%
ACTAAACGGGGTCGGCCACA+TGG - Chr7:15612907-15612926 None:intergenic 60.0%
AGCCCGCTTCCATCATCAGC+TGG - Chr7:15614387-15614406 None:intergenic 60.0%
ATGTGGCCGACCCCGTTTAG+TGG + Chr7:15612906-15612925 MsG0780036881.01.T01:intron 60.0%
CACAACACGTGTCCGACACC+GGG - Chr7:15616032-15616051 None:intergenic 60.0%
CACGGACACGACACAGACAC+TGG - Chr7:15616135-15616154 None:intergenic 60.0%
CGGAGATGAGGATGTTGCGC+TGG + Chr7:15612646-15612665 MsG0780036881.01.T01:intron 60.0%
CGTTTGGGCTTCCCCTCAAG+AGG + Chr7:15612084-15612103 MsG0780036881.01.T01:CDS 60.0%
GCACGGACACTCCTCGGTTT+AGG + Chr7:15616001-15616020 MsG0780036881.01.T01:intron 60.0%
GGGCTCTTGTCCAGGAGAGT+AGG - Chr7:15613290-15613309 None:intergenic 60.0%
GTTTAGGCGTGTCCCGGTGT+CGG + Chr7:15616017-15616036 MsG0780036881.01.T01:CDS 60.0%
TCCTCGGTTTAGGCGTGTCC+CGG + Chr7:15616011-15616030 MsG0780036881.01.T01:CDS 60.0%
TGTGGCCGACCCCGTTTAGT+GGG + Chr7:15612907-15612926 MsG0780036881.01.T01:intron 60.0%
! GGAGCACCCAAGTTCGATCC+TGG + Chr7:15613048-15613067 MsG0780036881.01.T01:intron 60.0%
! GGCAGTTGAGCGTAACGGAG+TGG + Chr7:15617397-15617416 MsG0780036881.01.T01:three_prime_UTR 60.0%
ACCGGGACACGCCTAAACCG+AGG - Chr7:15616015-15616034 None:intergenic 65.0%
GGCCAAGGAACGATCCGACC+AGG - Chr7:15613069-15613088 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 15611893 15617488 15611893 ID=MsG0780036881.01;Name=MsG0780036881.01
Chr7 mRNA 15611893 15617488 15611893 ID=MsG0780036881.01.T01;Parent=MsG0780036881.01;Name=MsG0780036881.01.T01;_AED=0.36;_eAED=0.49;_QI=0|0.6|0.54|1|0.5|0.63|11|445|457
Chr7 exon 15611893 15612135 15611893 ID=MsG0780036881.01.T01:exon:2680;Parent=MsG0780036881.01.T01
Chr7 exon 15612498 15612632 15612498 ID=MsG0780036881.01.T01:exon:2681;Parent=MsG0780036881.01.T01
Chr7 exon 15613718 15613842 15613718 ID=MsG0780036881.01.T01:exon:2682;Parent=MsG0780036881.01.T01
Chr7 exon 15614335 15614434 15614335 ID=MsG0780036881.01.T01:exon:2683;Parent=MsG0780036881.01.T01
Chr7 exon 15614633 15614686 15614633 ID=MsG0780036881.01.T01:exon:2684;Parent=MsG0780036881.01.T01
Chr7 exon 15615149 15615226 15615149 ID=MsG0780036881.01.T01:exon:2685;Parent=MsG0780036881.01.T01
Chr7 exon 15615699 15615796 15615699 ID=MsG0780036881.01.T01:exon:2686;Parent=MsG0780036881.01.T01
Chr7 exon 15615865 15615926 15615865 ID=MsG0780036881.01.T01:exon:2687;Parent=MsG0780036881.01.T01
Chr7 exon 15616002 15616186 15616002 ID=MsG0780036881.01.T01:exon:2688;Parent=MsG0780036881.01.T01
Chr7 exon 15616658 15616779 15616658 ID=MsG0780036881.01.T01:exon:2689;Parent=MsG0780036881.01.T01
Chr7 exon 15616872 15617488 15616872 ID=MsG0780036881.01.T01:exon:2690;Parent=MsG0780036881.01.T01
Chr7 CDS 15611893 15612135 15611893 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 CDS 15612498 15612632 15612498 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 CDS 15613718 15613842 15613718 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 CDS 15614335 15614434 15614335 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 CDS 15614633 15614686 15614633 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 CDS 15615149 15615226 15615149 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 CDS 15615699 15615796 15615699 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 CDS 15615865 15615926 15615865 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 CDS 15616002 15616186 15616002 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 CDS 15616658 15616779 15616658 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 CDS 15616872 15617043 15616872 ID=MsG0780036881.01.T01:cds;Parent=MsG0780036881.01.T01
Chr7 three_prime_UTR 15617044 15617488 15617044 ID=MsG0780036881.01.T01:three_prime_utr;Parent=MsG0780036881.01.T01
Gene Sequence

>MsG0780036881.01.T01

ATGGCGCTAAGATTCAGTAACACCGTACTTTCAGTTTCAGTTGTACGTACAAATCATTGTTCGAGGAAACCCACGTTCAGTTTCAGTTTCAGAAGTGTTGCTGTTCCTTCAAATACTACAATTAGAATGTCTTCAGGTGAAACAATCCCTTCAACTTCTTCAACCTCCAAAGTCATTGATTCACATCTACACGTTTGGGCTTCCCCTCAAGAGGTAACAAAAACATATCAATACTTTCTCACAAGAAGAGCCTCAGGTGTTTCGAGTGATAAGAAAGTACCACTTAAGTTGAAAGGAAAGTTCTATCGTGCAGCACTCAGACCGGTGATGTTGTATGGTACGAAGTGTTGGGCGGTTAAGAGCCAACACGAGAACCAAATTTGTGTTATGTATCATGGATGCTGTGGTACCAAACTTTTGCAGCTTATGGAGGAAGCAGGAGTAGATGGTGCACTCATTGTACAGCCAATTAATCATAAATTTGATCATAGTTATGTCACAAGTGTTTTAAAGAAATATCCAACCAAATTTGTTGGTTGTTGTCTTGCTAATCCAGCTGATGATGGAAGCGGGCTTAAGCAGTTTGAACATCTTGTTCTCAAGGATGGCTACCGTGCTGTTAGATTCAACCCTTATTTGTGGCCATCTGGTGAAAAGATGACAAATGAAATAGGAAAGACAATTTTCAAAAGGGCTGGGGAACTCAATGTAGCAGTTGGCTTCATGTGTATGAAGGGGCTTGATCTGCATATTTCCGAAATTGAGCAATTGTGCACAGAGTTTCCATCTACAGTTGTATTGCTTGATCACTTGGCCTTTTGCAAACCACCATTAAATGATGAGGAAGGTCTTGTATTTTCCAAGCTTTTAAATCTATCTAGATTCCCACAAGTAACACGGACACTCCTCGGTTTAGGCGTGTCCCGGTGTCGGACACGTGTTGTGTCAGACACCGACACGGCACCAACACTTGTAATTACACTGAATTATGTGATTTTTTTCAAATTATTAGCTATGTCGGCGTGCCAGTGTCTGTGTCGTGTCCGTGTCCGTGTCCGTGCTTCATTATGTCAAATGAATGTATATGTGAAATTCAGTGCTCTCTTCAGAGTGTCAAGAACACCATTTCCTTATCTGGATTTGTCTCCTCTCTTGTCCCAACTTGTCTCTAGCTTTGGTGCTAATCGTGTAATGTGGGGCAGTGATTTCCCATTTGTTGTTCCTGAATGTGGATACAAAGGAGCCAAAGAAGCAGTGCAGCTTATTGCTAATCAGATACCTTTGCCTTCTTCTGATTTAGAGTGGATCATGGGCAAGACTGCTGCACAACTCTTCGAAAGCCAGTTGACTGCTGCTAAGCAAGATTCTGATTGA

Protein sequence

>MsG0780036881.01.T01

MALRFSNTVLSVSVVRTNHCSRKPTFSFSFRSVAVPSNTTIRMSSGETIPSTSSTSKVIDSHLHVWASPQEVTKTYQYFLTRRASGVSSDKKVPLKLKGKFYRAALRPVMLYGTKCWAVKSQHENQICVMYHGCCGTKLLQLMEEAGVDGALIVQPINHKFDHSYVTSVLKKYPTKFVGCCLANPADDGSGLKQFEHLVLKDGYRAVRFNPYLWPSGEKMTNEIGKTIFKRAGELNVAVGFMCMKGLDLHISEIEQLCTEFPSTVVLLDHLAFCKPPLNDEEGLVFSKLLNLSRFPQVTRTLLGLGVSRCRTRVVSDTDTAPTLVITLNYVIFFKLLAMSACQCLCRVRVRVRASLCQMNVYVKFSALFRVSRTPFPYLDLSPLLSQLVSSFGANRVMWGSDFPFVVPECGYKGAKEAVQLIANQIPLPSSDLEWIMGKTAAQLFESQLTAAKQDSD*