Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006988.01.T01 | XP_039686229.1 | 89.2 | 250 | 24 | 2 | 1 | 249 | 1 | 248 | 5.01E-159 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006988.01.T01 | Q9CAU3 | 59.735 | 226 | 88 | 2 | 25 | 249 | 25 | 248 | 5.73E-91 | 278 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006988.01.T01 | A0A396J5X5 | 89.200 | 250 | 24 | 2 | 1 | 249 | 1 | 248 | 1.24e-158 | 457 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001100.01 | MsG0280006988.01 | 0.816434 | 5.540089e-52 | 3.925058e-49 |
| MsG0180005829.01 | MsG0280006988.01 | 0.802238 | 6.169204e-49 | 3.006601e-46 |
| MsG0280006988.01 | MsG0380014517.01 | 0.816558 | 5.196975e-52 | 3.694554e-49 |
| MsG0280006988.01 | MsG0480019065.01 | 0.806150 | 9.459597e-50 | 5.096922e-47 |
| MsG0280006988.01 | MsG0480021207.01 | 0.809504 | 1.831171e-50 | 1.077019e-47 |
| MsG0280006988.01 | MsG0480022918.01 | 0.810822 | 9.520780e-51 | 5.798276e-48 |
| MsG0280006988.01 | MsG0580024717.01 | 0.831206 | 1.904110e-55 | 2.052006e-52 |
| MsG0280006988.01 | MsG0680030514.01 | 0.805686 | 1.184314e-49 | 6.305937e-47 |
| MsG0280006988.01 | MsG0680032254.01 | 0.820099 | 8.203519e-53 | 6.431106e-50 |
| MsG0280006988.01 | MsG0780037670.01 | 0.827782 | 1.293817e-54 | 1.261501e-51 |
| MsG0280006988.01 | MsG0880043278.01 | 0.800585 | 1.344872e-48 | 6.285583e-46 |
| MsG0280006988.01 | MsG0880046533.01 | 0.814636 | 1.392932e-51 | 9.396675e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006988.01.T01 | MTR_2g018590 | 89.200 | 250 | 24 | 2 | 1 | 249 | 1 | 248 | 3.35e-162 | 457 |
| MsG0280006988.01.T01 | MTR_2g018600 | 91.200 | 250 | 19 | 2 | 1 | 249 | 1 | 248 | 1.35e-158 | 448 |
| MsG0280006988.01.T01 | MTR_2g018630 | 81.304 | 230 | 41 | 1 | 20 | 249 | 24 | 251 | 8.73e-136 | 390 |
| MsG0280006988.01.T01 | MTR_3g100420 | 66.260 | 246 | 73 | 4 | 12 | 249 | 30 | 273 | 7.71e-112 | 330 |
| MsG0280006988.01.T01 | MTR_4g021520 | 66.960 | 227 | 71 | 3 | 21 | 246 | 28 | 251 | 6.84e-104 | 308 |
| MsG0280006988.01.T01 | MTR_4g021520 | 66.960 | 227 | 71 | 3 | 21 | 246 | 28 | 251 | 1.74e-103 | 308 |
| MsG0280006988.01.T01 | MTR_4g021510 | 64.758 | 227 | 76 | 3 | 21 | 246 | 27 | 250 | 1.53e-101 | 303 |
| MsG0280006988.01.T01 | MTR_4g021490 | 64.758 | 227 | 76 | 3 | 21 | 246 | 28 | 251 | 3.77e-100 | 300 |
| MsG0280006988.01.T01 | MTR_4g021535 | 60.924 | 238 | 89 | 3 | 10 | 246 | 13 | 247 | 1.13e-99 | 298 |
| MsG0280006988.01.T01 | MTR_4g021500 | 65.198 | 227 | 75 | 3 | 21 | 246 | 28 | 251 | 4.79e-98 | 305 |
| MsG0280006988.01.T01 | MTR_4g021500 | 66.981 | 212 | 66 | 3 | 39 | 249 | 481 | 689 | 2.32e-93 | 293 |
| MsG0280006988.01.T01 | MTR_4g021500 | 65.198 | 227 | 75 | 3 | 21 | 246 | 28 | 251 | 5.76e-98 | 306 |
| MsG0280006988.01.T01 | MTR_4g021500 | 66.981 | 212 | 66 | 3 | 39 | 249 | 481 | 689 | 2.86e-93 | 293 |
| MsG0280006988.01.T01 | MTR_4g021530 | 60.924 | 238 | 89 | 3 | 10 | 246 | 17 | 251 | 2.57e-97 | 293 |
| MsG0280006988.01.T01 | MTR_2g018630 | 78.231 | 147 | 30 | 1 | 103 | 249 | 2 | 146 | 1.58e-76 | 236 |
| MsG0280006988.01.T01 | MTR_7g051430 | 44.167 | 240 | 129 | 3 | 11 | 249 | 10 | 245 | 1.82e-65 | 209 |
| MsG0280006988.01.T01 | MTR_3g045770 | 43.983 | 241 | 127 | 4 | 11 | 250 | 9 | 242 | 2.70e-65 | 210 |
| MsG0280006988.01.T01 | MTR_7g051430 | 44.167 | 240 | 129 | 3 | 11 | 249 | 10 | 245 | 1.20e-64 | 209 |
| MsG0280006988.01.T01 | MTR_4g021535 | 47.479 | 238 | 74 | 4 | 10 | 246 | 13 | 200 | 1.49e-63 | 204 |
| MsG0280006988.01.T01 | MTR_8g011350 | 43.028 | 251 | 138 | 3 | 1 | 250 | 1 | 247 | 6.74e-63 | 204 |
| MsG0280006988.01.T01 | MTR_8g011350 | 43.028 | 251 | 138 | 3 | 1 | 250 | 1 | 247 | 1.02e-62 | 204 |
| MsG0280006988.01.T01 | MTR_2g009200 | 46.781 | 233 | 102 | 4 | 16 | 247 | 11 | 222 | 3.11e-62 | 201 |
| MsG0280006988.01.T01 | MTR_7g080180 | 40.164 | 244 | 137 | 5 | 11 | 249 | 8 | 247 | 1.41e-56 | 187 |
| MsG0280006988.01.T01 | MTR_7g080180 | 40.164 | 244 | 137 | 5 | 11 | 249 | 8 | 247 | 3.09e-56 | 187 |
| MsG0280006988.01.T01 | MTR_2g095750 | 35.385 | 195 | 118 | 4 | 49 | 242 | 102 | 289 | 2.66e-36 | 134 |
| MsG0280006988.01.T01 | MTR_1g050545 | 34.359 | 195 | 119 | 3 | 49 | 242 | 85 | 271 | 1.10e-35 | 132 |
| MsG0280006988.01.T01 | MTR_4g075150 | 34.008 | 247 | 146 | 8 | 13 | 249 | 9 | 248 | 2.01e-35 | 131 |
| MsG0280006988.01.T01 | MTR_4g075150 | 33.735 | 249 | 148 | 8 | 11 | 249 | 7 | 248 | 2.26e-35 | 131 |
| MsG0280006988.01.T01 | MTR_4g057600 | 32.353 | 204 | 129 | 3 | 48 | 250 | 96 | 291 | 2.36e-35 | 132 |
| MsG0280006988.01.T01 | MTR_2g095730 | 35.122 | 205 | 124 | 5 | 48 | 250 | 95 | 292 | 2.43e-35 | 132 |
| MsG0280006988.01.T01 | MTR_2g062980 | 32.453 | 265 | 151 | 9 | 2 | 251 | 4 | 255 | 5.72e-35 | 130 |
| MsG0280006988.01.T01 | MTR_4g057595 | 35.028 | 177 | 107 | 2 | 48 | 224 | 98 | 266 | 7.17e-35 | 130 |
| MsG0280006988.01.T01 | MTR_4g057585 | 35.028 | 177 | 107 | 2 | 48 | 224 | 97 | 265 | 1.45e-34 | 129 |
| MsG0280006988.01.T01 | MTR_4g122960 | 32.636 | 239 | 149 | 8 | 13 | 247 | 20 | 250 | 1.83e-34 | 129 |
| MsG0280006988.01.T01 | MTR_4g057570 | 33.333 | 207 | 121 | 4 | 50 | 247 | 92 | 290 | 1.21e-33 | 127 |
| MsG0280006988.01.T01 | MTR_1g094155 | 33.171 | 205 | 125 | 5 | 48 | 250 | 91 | 285 | 1.87e-33 | 126 |
| MsG0280006988.01.T01 | MTR_2g081620 | 35.398 | 226 | 123 | 8 | 36 | 251 | 44 | 256 | 3.62e-33 | 125 |
| MsG0280006988.01.T01 | MTR_4g122950 | 32.218 | 239 | 150 | 8 | 13 | 247 | 20 | 250 | 1.40e-32 | 124 |
| MsG0280006988.01.T01 | MTR_2g012850 | 34.685 | 222 | 131 | 8 | 32 | 249 | 35 | 246 | 1.45e-32 | 124 |
| MsG0280006988.01.T01 | MTR_1g095560 | 30.859 | 256 | 156 | 8 | 9 | 251 | 2 | 249 | 1.49e-32 | 124 |
| MsG0280006988.01.T01 | MTR_1g095560 | 30.859 | 256 | 156 | 8 | 9 | 251 | 2 | 249 | 1.78e-32 | 124 |
| MsG0280006988.01.T01 | MTR_2g063000 | 31.955 | 266 | 150 | 10 | 5 | 251 | 3 | 256 | 1.80e-32 | 124 |
| MsG0280006988.01.T01 | MTR_2g062990 | 30.189 | 265 | 157 | 9 | 2 | 251 | 4 | 255 | 7.34e-32 | 122 |
| MsG0280006988.01.T01 | MTR_4g089155 | 33.937 | 221 | 136 | 7 | 32 | 249 | 53 | 266 | 1.72e-31 | 121 |
| MsG0280006988.01.T01 | MTR_7g013790 | 34.091 | 220 | 121 | 9 | 36 | 246 | 39 | 243 | 1.07e-30 | 119 |
| MsG0280006988.01.T01 | MTR_3g498755 | 32.328 | 232 | 142 | 7 | 22 | 249 | 4 | 224 | 3.88e-30 | 117 |
| MsG0280006988.01.T01 | MTR_2g012860 | 32.340 | 235 | 147 | 7 | 18 | 249 | 27 | 252 | 5.43e-30 | 117 |
| MsG0280006988.01.T01 | MTR_8g099930 | 34.211 | 228 | 135 | 8 | 24 | 248 | 25 | 240 | 5.81e-30 | 116 |
| MsG0280006988.01.T01 | MTR_1g095540 | 29.644 | 253 | 157 | 8 | 12 | 251 | 5 | 249 | 6.44e-30 | 116 |
| MsG0280006988.01.T01 | MTR_3g434850 | 34.597 | 211 | 121 | 7 | 40 | 247 | 37 | 233 | 1.58e-29 | 115 |
| MsG0280006988.01.T01 | MTR_1g020090 | 35.398 | 226 | 127 | 7 | 33 | 250 | 90 | 304 | 1.85e-29 | 115 |
| MsG0280006988.01.T01 | MTR_5g072570 | 30.290 | 241 | 151 | 7 | 12 | 245 | 6 | 236 | 4.41e-29 | 114 |
| MsG0280006988.01.T01 | MTR_7g021130 | 31.780 | 236 | 146 | 7 | 11 | 243 | 9 | 232 | 7.50e-29 | 113 |
| MsG0280006988.01.T01 | MTR_3g079600 | 34.555 | 191 | 116 | 4 | 33 | 221 | 76 | 259 | 1.74e-28 | 113 |
| MsG0280006988.01.T01 | MTR_3g034290 | 31.163 | 215 | 137 | 6 | 33 | 244 | 75 | 281 | 1.75e-28 | 112 |
| MsG0280006988.01.T01 | MTR_3g079620 | 34.574 | 188 | 114 | 4 | 36 | 221 | 81 | 261 | 2.21e-28 | 112 |
| MsG0280006988.01.T01 | MTR_1g021010 | 34.375 | 224 | 132 | 7 | 33 | 250 | 76 | 290 | 2.80e-28 | 112 |
| MsG0280006988.01.T01 | MTR_3g034290 | 31.163 | 215 | 137 | 6 | 33 | 244 | 75 | 281 | 6.07e-28 | 111 |
| MsG0280006988.01.T01 | MTR_3g079560 | 32.984 | 191 | 119 | 4 | 33 | 221 | 78 | 261 | 6.41e-28 | 111 |
| MsG0280006988.01.T01 | MTR_2g449850 | 33.500 | 200 | 118 | 6 | 50 | 246 | 55 | 242 | 1.85e-27 | 109 |
| MsG0280006988.01.T01 | MTR_3g090130 | 31.776 | 214 | 132 | 5 | 36 | 245 | 32 | 235 | 1.97e-27 | 109 |
| MsG0280006988.01.T01 | MTR_3g079590 | 34.574 | 188 | 114 | 4 | 36 | 221 | 81 | 261 | 2.54e-27 | 109 |
| MsG0280006988.01.T01 | MTR_3g079570 | 33.511 | 188 | 116 | 4 | 36 | 221 | 82 | 262 | 1.19e-26 | 107 |
| MsG0280006988.01.T01 | MTR_0003s0560 | 31.818 | 220 | 137 | 8 | 33 | 248 | 74 | 284 | 1.47e-26 | 105 |
| MsG0280006988.01.T01 | MTR_1g021020 | 34.375 | 192 | 116 | 5 | 33 | 221 | 78 | 262 | 2.24e-26 | 107 |
| MsG0280006988.01.T01 | MTR_3g079630 | 33.511 | 188 | 116 | 4 | 36 | 221 | 81 | 261 | 2.77e-26 | 107 |
| MsG0280006988.01.T01 | MTR_0003s0560 | 31.818 | 220 | 137 | 8 | 33 | 248 | 74 | 284 | 1.21e-25 | 105 |
| MsG0280006988.01.T01 | MTR_1g040370 | 32.979 | 188 | 100 | 7 | 40 | 220 | 37 | 205 | 1.56e-24 | 101 |
| MsG0280006988.01.T01 | MTR_3g090150 | 30.909 | 220 | 135 | 9 | 32 | 245 | 34 | 242 | 1.84e-24 | 101 |
| MsG0280006988.01.T01 | MTR_2g095710 | 31.982 | 222 | 124 | 8 | 36 | 250 | 79 | 280 | 4.07e-24 | 100 |
| MsG0280006988.01.T01 | MTR_2g063000 | 27.799 | 259 | 139 | 8 | 5 | 251 | 3 | 225 | 1.62e-23 | 98.6 |
| MsG0280006988.01.T01 | MTR_5g097180 | 26.374 | 182 | 118 | 5 | 48 | 223 | 42 | 213 | 8.79e-16 | 76.6 |
| MsG0280006988.01.T01 | MTR_4g084710 | 28.333 | 180 | 117 | 5 | 48 | 223 | 44 | 215 | 9.59e-16 | 76.6 |
| MsG0280006988.01.T01 | MTR_0075s0010 | 31.818 | 132 | 71 | 6 | 33 | 159 | 8 | 125 | 1.69e-11 | 63.5 |
| MsG0280006988.01.T01 | MTR_1g102130 | 32.432 | 111 | 61 | 4 | 49 | 158 | 107 | 204 | 5.19e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006988.01.T01 | AT2G22970 | 59.091 | 220 | 88 | 1 | 30 | 249 | 22 | 239 | 1.88e-93 | 278 |
| MsG0280006988.01.T01 | AT1G73290 | 58.850 | 226 | 90 | 2 | 25 | 249 | 24 | 247 | 2.86e-93 | 277 |
| MsG0280006988.01.T01 | AT2G22970 | 59.091 | 220 | 88 | 1 | 30 | 249 | 22 | 239 | 2.89e-92 | 278 |
| MsG0280006988.01.T01 | AT2G22920 | 59.276 | 221 | 87 | 2 | 30 | 249 | 22 | 240 | 4.54e-92 | 274 |
| MsG0280006988.01.T01 | AT2G22970 | 59.091 | 220 | 88 | 1 | 30 | 249 | 22 | 239 | 4.67e-92 | 278 |
| MsG0280006988.01.T01 | AT1G73300 | 59.735 | 226 | 88 | 2 | 25 | 249 | 25 | 248 | 5.84e-92 | 278 |
| MsG0280006988.01.T01 | AT1G73300 | 59.735 | 226 | 88 | 2 | 25 | 249 | 25 | 248 | 5.84e-92 | 278 |
| MsG0280006988.01.T01 | AT2G22970 | 59.091 | 220 | 88 | 1 | 30 | 249 | 22 | 239 | 1.06e-91 | 277 |
| MsG0280006988.01.T01 | AT1G73290 | 59.375 | 224 | 88 | 2 | 25 | 247 | 24 | 245 | 1.72e-91 | 275 |
| MsG0280006988.01.T01 | AT2G22980 | 59.111 | 225 | 86 | 2 | 27 | 250 | 20 | 239 | 1.83e-91 | 274 |
| MsG0280006988.01.T01 | AT1G73290 | 58.850 | 226 | 90 | 2 | 25 | 249 | 24 | 247 | 5.10e-91 | 275 |
| MsG0280006988.01.T01 | AT2G22920 | 59.276 | 221 | 87 | 2 | 30 | 249 | 22 | 240 | 6.85e-91 | 274 |
| MsG0280006988.01.T01 | AT2G22920 | 59.276 | 221 | 87 | 2 | 30 | 249 | 22 | 240 | 1.27e-90 | 274 |
| MsG0280006988.01.T01 | AT1G73270 | 60.181 | 221 | 85 | 2 | 30 | 249 | 30 | 248 | 4.08e-90 | 273 |
| MsG0280006988.01.T01 | AT1G73270 | 60.181 | 221 | 85 | 2 | 30 | 249 | 30 | 248 | 4.60e-90 | 273 |
| MsG0280006988.01.T01 | AT5G36180 | 60.177 | 226 | 87 | 2 | 25 | 249 | 25 | 248 | 1.40e-89 | 272 |
| MsG0280006988.01.T01 | AT2G23010 | 55.602 | 241 | 99 | 4 | 10 | 249 | 6 | 239 | 1.87e-89 | 271 |
| MsG0280006988.01.T01 | AT2G23010 | 55.602 | 241 | 99 | 4 | 10 | 249 | 6 | 239 | 2.08e-89 | 271 |
| MsG0280006988.01.T01 | AT3G10450 | 57.522 | 226 | 93 | 2 | 25 | 249 | 21 | 244 | 5.12e-89 | 270 |
| MsG0280006988.01.T01 | AT1G73280 | 54.217 | 249 | 108 | 3 | 5 | 249 | 2 | 248 | 8.18e-89 | 268 |
| MsG0280006988.01.T01 | AT3G10450 | 57.522 | 226 | 93 | 2 | 25 | 249 | 21 | 244 | 1.48e-88 | 269 |
| MsG0280006988.01.T01 | AT2G22980 | 58.667 | 225 | 85 | 3 | 27 | 250 | 20 | 237 | 1.72e-88 | 268 |
| MsG0280006988.01.T01 | AT1G73310 | 57.965 | 226 | 92 | 2 | 25 | 249 | 25 | 248 | 2.47e-88 | 268 |
| MsG0280006988.01.T01 | AT1G73310 | 57.965 | 226 | 92 | 2 | 25 | 249 | 25 | 248 | 3.11e-88 | 268 |
| MsG0280006988.01.T01 | AT2G22980 | 58.667 | 225 | 85 | 3 | 27 | 250 | 20 | 237 | 3.61e-88 | 268 |
| MsG0280006988.01.T01 | AT2G22980 | 58.667 | 225 | 85 | 3 | 27 | 250 | 20 | 237 | 4.44e-88 | 268 |
| MsG0280006988.01.T01 | AT1G73280 | 54.217 | 249 | 108 | 3 | 5 | 249 | 2 | 248 | 5.11e-88 | 268 |
| MsG0280006988.01.T01 | AT1G33540 | 58.371 | 221 | 89 | 2 | 30 | 249 | 26 | 244 | 1.26e-87 | 268 |
| MsG0280006988.01.T01 | AT5G09640 | 52.083 | 240 | 112 | 2 | 12 | 250 | 6 | 243 | 1.37e-87 | 268 |
| MsG0280006988.01.T01 | AT2G23000 | 57.466 | 221 | 90 | 3 | 30 | 249 | 22 | 239 | 1.06e-84 | 259 |
| MsG0280006988.01.T01 | AT2G23000 | 57.466 | 221 | 90 | 3 | 30 | 249 | 22 | 239 | 1.06e-84 | 259 |
| MsG0280006988.01.T01 | AT2G22990 | 57.078 | 219 | 90 | 3 | 30 | 247 | 20 | 235 | 2.41e-84 | 258 |
| MsG0280006988.01.T01 | AT3G12240 | 54.425 | 226 | 100 | 2 | 25 | 249 | 20 | 243 | 2.52e-84 | 258 |
| MsG0280006988.01.T01 | AT2G22990 | 57.078 | 219 | 90 | 3 | 30 | 247 | 20 | 235 | 3.17e-84 | 259 |
| MsG0280006988.01.T01 | AT2G22990 | 57.078 | 219 | 90 | 3 | 30 | 247 | 20 | 235 | 7.06e-84 | 257 |
| MsG0280006988.01.T01 | AT3G12203 | 53.086 | 243 | 109 | 3 | 8 | 249 | 7 | 245 | 7.40e-84 | 257 |
| MsG0280006988.01.T01 | AT3G12203 | 55.656 | 221 | 95 | 2 | 30 | 249 | 6 | 224 | 7.21e-83 | 254 |
| MsG0280006988.01.T01 | AT3G12220 | 55.405 | 222 | 96 | 2 | 27 | 247 | 21 | 240 | 5.95e-81 | 248 |
| MsG0280006988.01.T01 | AT3G12220 | 54.911 | 224 | 98 | 2 | 27 | 249 | 21 | 242 | 2.88e-80 | 248 |
| MsG0280006988.01.T01 | AT3G12230 | 52.232 | 224 | 104 | 2 | 27 | 249 | 21 | 242 | 3.24e-80 | 248 |
| MsG0280006988.01.T01 | AT2G22990 | 55.251 | 219 | 85 | 3 | 30 | 247 | 20 | 226 | 2.55e-79 | 245 |
| MsG0280006988.01.T01 | AT1G33540 | 58.000 | 200 | 81 | 2 | 51 | 249 | 4 | 201 | 6.96e-77 | 239 |
| MsG0280006988.01.T01 | AT3G10450 | 56.566 | 198 | 83 | 2 | 51 | 247 | 4 | 199 | 3.80e-76 | 235 |
| MsG0280006988.01.T01 | AT3G10450 | 56.000 | 200 | 85 | 2 | 51 | 249 | 4 | 201 | 1.16e-75 | 235 |
| MsG0280006988.01.T01 | AT3G12220 | 53.000 | 200 | 91 | 2 | 51 | 249 | 15 | 212 | 9.03e-67 | 212 |
| MsG0280006988.01.T01 | AT4G12910 | 44.215 | 242 | 131 | 3 | 10 | 249 | 11 | 250 | 6.05e-64 | 206 |
| MsG0280006988.01.T01 | AT4G12910 | 44.215 | 242 | 131 | 3 | 10 | 249 | 11 | 250 | 1.25e-63 | 207 |
| MsG0280006988.01.T01 | AT3G12203 | 52.381 | 189 | 87 | 2 | 62 | 249 | 1 | 187 | 2.40e-63 | 202 |
| MsG0280006988.01.T01 | AT3G25420 | 40.083 | 242 | 140 | 3 | 11 | 251 | 8 | 245 | 1.42e-59 | 196 |
| MsG0280006988.01.T01 | AT5G36180 | 52.703 | 148 | 67 | 2 | 103 | 249 | 1 | 146 | 4.95e-44 | 151 |
| MsG0280006988.01.T01 | AT5G36180 | 52.703 | 148 | 67 | 2 | 103 | 249 | 1 | 146 | 9.95e-44 | 151 |
| MsG0280006988.01.T01 | AT5G36180 | 52.703 | 148 | 67 | 2 | 103 | 249 | 1 | 146 | 1.08e-43 | 150 |
| MsG0280006988.01.T01 | AT5G36180 | 52.703 | 148 | 67 | 2 | 103 | 249 | 1 | 146 | 1.08e-43 | 150 |
| MsG0280006988.01.T01 | AT1G73310 | 49.324 | 148 | 72 | 2 | 103 | 249 | 1 | 146 | 2.97e-41 | 144 |
| MsG0280006988.01.T01 | AT1G73280 | 50.000 | 148 | 71 | 2 | 103 | 249 | 1 | 146 | 5.69e-41 | 144 |
| MsG0280006988.01.T01 | AT5G23210 | 34.322 | 236 | 140 | 8 | 23 | 250 | 38 | 266 | 7.44e-37 | 135 |
| MsG0280006988.01.T01 | AT5G23210 | 34.322 | 236 | 140 | 8 | 23 | 250 | 38 | 266 | 1.40e-36 | 135 |
| MsG0280006988.01.T01 | AT5G22980 | 36.932 | 176 | 102 | 3 | 49 | 224 | 100 | 266 | 9.03e-35 | 130 |
| MsG0280006988.01.T01 | AT2G22990 | 50.820 | 122 | 58 | 2 | 127 | 247 | 1 | 121 | 2.69e-34 | 125 |
| MsG0280006988.01.T01 | AT2G22990 | 50.820 | 122 | 58 | 2 | 127 | 247 | 1 | 121 | 3.05e-34 | 125 |
| MsG0280006988.01.T01 | AT3G10410 | 33.005 | 203 | 126 | 4 | 49 | 250 | 101 | 294 | 7.22e-34 | 128 |
| MsG0280006988.01.T01 | AT2G22980 | 50.400 | 125 | 56 | 2 | 127 | 250 | 1 | 120 | 1.87e-33 | 123 |
| MsG0280006988.01.T01 | AT3G45010 | 32.857 | 210 | 125 | 5 | 45 | 250 | 99 | 296 | 4.32e-33 | 125 |
| MsG0280006988.01.T01 | AT4G30810 | 30.579 | 242 | 156 | 6 | 15 | 251 | 18 | 252 | 6.06e-33 | 125 |
| MsG0280006988.01.T01 | AT3G52020 | 38.947 | 190 | 105 | 5 | 32 | 220 | 79 | 258 | 7.13e-33 | 125 |
| MsG0280006988.01.T01 | AT3G52000 | 32.258 | 217 | 136 | 4 | 32 | 247 | 63 | 269 | 9.48e-33 | 124 |
| MsG0280006988.01.T01 | AT1G73280 | 50.413 | 121 | 59 | 1 | 130 | 249 | 1 | 121 | 9.51e-33 | 121 |
| MsG0280006988.01.T01 | AT4G30610 | 35.294 | 221 | 131 | 8 | 33 | 249 | 33 | 245 | 2.03e-32 | 123 |
| MsG0280006988.01.T01 | AT1G28110 | 35.616 | 219 | 126 | 7 | 33 | 248 | 32 | 238 | 4.55e-32 | 122 |
| MsG0280006988.01.T01 | AT1G28110 | 35.616 | 219 | 126 | 7 | 33 | 248 | 32 | 238 | 4.55e-32 | 122 |
| MsG0280006988.01.T01 | AT3G17180 | 33.981 | 206 | 120 | 9 | 49 | 247 | 55 | 251 | 6.13e-32 | 122 |
| MsG0280006988.01.T01 | AT4G15100 | 30.712 | 267 | 160 | 8 | 1 | 250 | 1 | 259 | 7.52e-32 | 122 |
| MsG0280006988.01.T01 | AT3G17180 | 33.981 | 206 | 120 | 9 | 49 | 247 | 55 | 251 | 1.07e-31 | 121 |
| MsG0280006988.01.T01 | AT5G08260 | 33.632 | 223 | 135 | 9 | 32 | 249 | 39 | 253 | 9.66e-31 | 119 |
| MsG0280006988.01.T01 | AT2G33530 | 36.111 | 216 | 123 | 8 | 36 | 248 | 37 | 240 | 9.91e-31 | 119 |
| MsG0280006988.01.T01 | AT3G52010 | 32.432 | 222 | 135 | 6 | 31 | 247 | 63 | 274 | 4.32e-30 | 117 |
| MsG0280006988.01.T01 | AT1G43780 | 33.945 | 218 | 133 | 6 | 31 | 245 | 36 | 245 | 5.18e-30 | 117 |
| MsG0280006988.01.T01 | AT2G24000 | 33.484 | 221 | 135 | 7 | 33 | 249 | 31 | 243 | 5.91e-30 | 116 |
| MsG0280006988.01.T01 | AT1G61130 | 33.036 | 224 | 137 | 7 | 31 | 249 | 30 | 245 | 7.16e-30 | 116 |
| MsG0280006988.01.T01 | AT2G35770 | 33.790 | 219 | 127 | 6 | 36 | 247 | 41 | 248 | 9.89e-30 | 116 |
| MsG0280006988.01.T01 | AT3G07990 | 32.719 | 217 | 132 | 7 | 36 | 246 | 37 | 245 | 1.19e-29 | 115 |
| MsG0280006988.01.T01 | AT2G24010 | 34.234 | 222 | 134 | 8 | 32 | 249 | 30 | 243 | 1.95e-29 | 115 |
| MsG0280006988.01.T01 | AT3G02110 | 33.645 | 214 | 130 | 8 | 36 | 246 | 41 | 245 | 1.98e-29 | 115 |
| MsG0280006988.01.T01 | AT1G11080 | 34.222 | 225 | 133 | 8 | 32 | 249 | 50 | 266 | 2.93e-29 | 115 |
| MsG0280006988.01.T01 | AT1G11080 | 34.222 | 225 | 133 | 8 | 32 | 249 | 50 | 266 | 3.29e-29 | 115 |
| MsG0280006988.01.T01 | AT3G63470 | 33.854 | 192 | 113 | 6 | 32 | 221 | 81 | 260 | 1.62e-28 | 113 |
| MsG0280006988.01.T01 | AT2G35780 | 33.641 | 217 | 126 | 8 | 36 | 246 | 33 | 237 | 1.50e-27 | 110 |
| MsG0280006988.01.T01 | AT2G12480 | 31.336 | 217 | 137 | 6 | 32 | 245 | 31 | 238 | 1.63e-27 | 109 |
| MsG0280006988.01.T01 | AT2G12480 | 31.336 | 217 | 137 | 6 | 32 | 245 | 31 | 238 | 1.92e-27 | 109 |
| MsG0280006988.01.T01 | AT2G12480 | 31.336 | 217 | 137 | 6 | 32 | 245 | 31 | 238 | 2.00e-27 | 109 |
| MsG0280006988.01.T01 | AT5G42240 | 33.028 | 218 | 132 | 6 | 32 | 245 | 32 | 239 | 2.04e-27 | 109 |
| MsG0280006988.01.T01 | AT2G12480 | 31.336 | 217 | 137 | 6 | 32 | 245 | 31 | 238 | 2.52e-27 | 109 |
| MsG0280006988.01.T01 | AT5G42230 | 33.158 | 190 | 118 | 4 | 32 | 220 | 28 | 209 | 1.43e-26 | 107 |
| MsG0280006988.01.T01 | AT5G42230 | 33.158 | 190 | 118 | 4 | 32 | 220 | 28 | 209 | 1.43e-26 | 107 |
| MsG0280006988.01.T01 | AT2G05850 | 31.959 | 194 | 117 | 5 | 32 | 220 | 63 | 246 | 5.25e-26 | 106 |
| MsG0280006988.01.T01 | AT2G24010 | 31.646 | 237 | 135 | 9 | 32 | 249 | 1 | 229 | 1.83e-25 | 103 |
| MsG0280006988.01.T01 | AT3G56540 | 33.333 | 159 | 97 | 4 | 32 | 189 | 79 | 229 | 2.24e-25 | 101 |
| MsG0280006988.01.T01 | AT2G24010 | 31.646 | 237 | 135 | 9 | 32 | 249 | 30 | 258 | 8.03e-25 | 102 |
| MsG0280006988.01.T01 | AT5G22960 | 26.946 | 167 | 95 | 2 | 48 | 214 | 35 | 174 | 2.27e-23 | 94.0 |
| MsG0280006988.01.T01 | AT2G24010 | 32.683 | 205 | 112 | 8 | 32 | 218 | 1 | 197 | 8.37e-22 | 94.0 |
| MsG0280006988.01.T01 | AT5G23210 | 31.765 | 170 | 106 | 6 | 85 | 250 | 8 | 171 | 2.11e-20 | 89.7 |
| MsG0280006988.01.T01 | AT5G23210 | 31.361 | 169 | 106 | 6 | 86 | 250 | 8 | 170 | 9.43e-20 | 87.4 |
| MsG0280006988.01.T01 | AT5G23210 | 31.361 | 169 | 106 | 6 | 86 | 250 | 8 | 170 | 1.21e-19 | 87.4 |
| MsG0280006988.01.T01 | AT1G15000 | 28.492 | 179 | 115 | 4 | 48 | 223 | 36 | 204 | 1.03e-17 | 82.4 |
| MsG0280006988.01.T01 | AT2G22920 | 59.322 | 59 | 23 | 1 | 192 | 249 | 3 | 61 | 4.10e-14 | 70.5 |
| MsG0280006988.01.T01 | AT2G24000 | 40.860 | 93 | 47 | 4 | 33 | 123 | 31 | 117 | 8.29e-11 | 62.0 |
Find 60 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCATTTGATTGAAATTT+TGG | 0.036982 | 2:-9027622 | None:intergenic |
| ACAAAGTTTAGTTCAACTTA+TGG | 0.250544 | 2:+9025920 | MsG0280006988.01.T01:CDS |
| TTGTTTGCAGGAAATGAAAA+AGG | 0.253261 | 2:+9027794 | MsG0280006988.01.T01:intron |
| AACCCGGTTTCAAGCATAAA+AGG | 0.293014 | 2:-9026046 | None:intergenic |
| TATTATATTTGTAGATTTGC+CGG | 0.329137 | 2:+9027388 | MsG0280006988.01.T01:CDS |
| CAAAGTTTAGTTCAACTTAT+GGG | 0.357058 | 2:+9025921 | MsG0280006988.01.T01:CDS |
| AGGATGATCCTCTCATACTA+TGG | 0.360528 | 2:+9026214 | MsG0280006988.01.T01:CDS |
| CCTGGTTGCTCTGCTTTGTC+TGG | 0.360578 | 2:+9026249 | MsG0280006988.01.T01:CDS |
| TTTCTTCAGGGATACTTGTT+GGG | 0.364854 | 2:+9028070 | MsG0280006988.01.T01:intron |
| ATTGCTGGTGACTCATACTC+TGG | 0.380453 | 2:+9027649 | MsG0280006988.01.T01:CDS |
| TCTTGAACAATGACAGGAAC+AGG | 0.395346 | 2:-9027676 | None:intergenic |
| TCTATAGTGAAGTTTCTTCC+TGG | 0.395633 | 2:+9026007 | MsG0280006988.01.T01:CDS |
| CTTTCTTCAGGGATACTTGT+TGG | 0.403695 | 2:+9028069 | MsG0280006988.01.T01:intron |
| TGATCTTGAGGCAACATTCA+TGG | 0.408972 | 2:+9027224 | MsG0280006988.01.T01:CDS |
| GCATAAAAGGAAGGGGTCCT+TGG | 0.426486 | 2:-9026033 | None:intergenic |
| ATATTTGTTGTTAAGGTATG+TGG | 0.432299 | 2:+9026128 | MsG0280006988.01.T01:intron |
| ACCAAGTTCATCAATTTCTC+AGG | 0.441699 | 2:+9027477 | MsG0280006988.01.T01:CDS |
| AGTATGAGAGGATCATCCTT+TGG | 0.453644 | 2:-9026210 | None:intergenic |
| TAAGTGAAGCCTGTGGAAAC+CGG | 0.454907 | 2:-9027407 | None:intergenic |
| AGTCCCATTCCATGAGCAAA+AGG | 0.456013 | 2:-9028133 | None:intergenic |
| TTGTTAAGGTATGTGGGAGT+GGG | 0.461457 | 2:+9026135 | MsG0280006988.01.T01:intron |
| GGAAGGGGTCCTTGGAATCC+AGG | 0.464903 | 2:-9026025 | None:intergenic |
| GTTGTTAAGGTATGTGGGAG+TGG | 0.467038 | 2:+9026134 | MsG0280006988.01.T01:intron |
| AATTACCAATTTCAAGCAAA+AGG | 0.467732 | 2:-9026272 | None:intergenic |
| TGTTGCCTCAAGATCAGATT+AGG | 0.476145 | 2:-9027217 | None:intergenic |
| CTATGGCTCACTGGTGGACC+TGG | 0.476423 | 2:+9026231 | MsG0280006988.01.T01:CDS |
| GCAATTTCTTGAACAATGAC+AGG | 0.477759 | 2:-9027682 | None:intergenic |
| TCCTGAGAAATTGATGAACT+TGG | 0.480271 | 2:-9027478 | None:intergenic |
| CAACATTCATGGACAAAGGT+GGG | 0.489912 | 2:+9027235 | MsG0280006988.01.T01:CDS |
| TATTTGTTGTTAAGGTATGT+GGG | 0.503693 | 2:+9026129 | MsG0280006988.01.T01:intron |
| ACTTATGCCACAGCAGAATC+CGG | 0.506910 | 2:+9027425 | MsG0280006988.01.T01:CDS |
| CCTGGAGATTTATCCATGGT+TGG | 0.509586 | 2:-9027820 | None:intergenic |
| AAGTTTCTTCCTGGATTCCA+AGG | 0.510461 | 2:+9026016 | MsG0280006988.01.T01:CDS |
| GTAGATTTGCCGGTTTCCAC+AGG | 0.511485 | 2:+9027398 | MsG0280006988.01.T01:CDS |
| TGCTTTCAAGTTGCAACATG+TGG | 0.513785 | 2:+9025983 | MsG0280006988.01.T01:CDS |
| CCTCTCATACTATGGCTCAC+TGG | 0.524416 | 2:+9026222 | MsG0280006988.01.T01:CDS |
| TTCTTCAGGGATACTTGTTG+GGG | 0.528905 | 2:+9028071 | MsG0280006988.01.T01:intron |
| CCAACCATGGATAAATCTCC+AGG | 0.530034 | 2:+9027820 | MsG0280006988.01.T01:CDS |
| CGGTTTCAAGCATAAAAGGA+AGG | 0.551042 | 2:-9026042 | None:intergenic |
| GCAACATTCATGGACAAAGG+TGG | 0.554535 | 2:+9027234 | MsG0280006988.01.T01:CDS |
| AACATTCATGGACAAAGGTG+GGG | 0.555157 | 2:+9027236 | MsG0280006988.01.T01:CDS |
| GTTTAGTTCAACTTATGGGA+AGG | 0.563304 | 2:+9025925 | MsG0280006988.01.T01:CDS |
| CCAGACAAAGCAGAGCAACC+AGG | 0.565074 | 2:-9026249 | None:intergenic |
| CTCATACTATGGCTCACTGG+TGG | 0.567761 | 2:+9026225 | MsG0280006988.01.T01:CDS |
| ACATTCATGGACAAAGGTGG+GGG | 0.575194 | 2:+9027237 | MsG0280006988.01.T01:CDS |
| GAATGCTGCAACAACCAGAA+AGG | 0.579584 | 2:+9028093 | MsG0280006988.01.T01:CDS |
| GGTTTCAAGCATAAAAGGAA+GGG | 0.584126 | 2:-9026041 | None:intergenic |
| AGTTCATCAATTTCTCAGGA+AGG | 0.588723 | 2:+9027481 | MsG0280006988.01.T01:CDS |
| GTCCCATTCCATGAGCAAAA+GGG | 0.589244 | 2:-9028132 | None:intergenic |
| AATTACGTCGTATAGTTCAT+CGG | 0.595080 | 2:-9028161 | None:intergenic |
| TTTAGCACCGGATTCTGCTG+TGG | 0.596870 | 2:-9027432 | None:intergenic |
| GTCTACCTAATCTGATCTTG+AGG | 0.598449 | 2:+9027212 | MsG0280006988.01.T01:CDS |
| CCAGTGAGCCATAGTATGAG+AGG | 0.603687 | 2:-9026222 | None:intergenic |
| TTGACCTGGAGATTTATCCA+TGG | 0.606484 | 2:-9027824 | None:intergenic |
| GTTTCAAGCATAAAAGGAAG+GGG | 0.608914 | 2:-9026040 | None:intergenic |
| TGAATCGCTTCGTTTAGCAC+CGG | 0.613421 | 2:-9027444 | None:intergenic |
| TGAATCAGAGAAGAATCCAA+AGG | 0.659518 | 2:+9026194 | MsG0280006988.01.T01:CDS |
| GAGGCAACATTCATGGACAA+AGG | 0.660602 | 2:+9027231 | MsG0280006988.01.T01:CDS |
| ATTGTTCAAGAAATTGCACA+AGG | 0.702131 | 2:+9027688 | MsG0280006988.01.T01:CDS |
| TGTGGCATAAGTGAAGCCTG+TGG | 0.758304 | 2:-9027414 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATACATGATTTAAA+AGG | - | Chr2:9027329-9027348 | None:intergenic | 10.0% |
| !! | ATATTTAGTTATTATATGAT+AGG | - | Chr2:9026497-9026516 | None:intergenic | 10.0% |
| !!! | AAGTTTTTTTTAATCTATTA+TGG | + | Chr2:9026084-9026103 | MsG0280006988.01.T01:intron | 10.0% |
| !! | TAAATCATGTATTTATATAC+CGG | + | Chr2:9027331-9027350 | MsG0280006988.01.T01:intron | 15.0% |
| !!! | ACATTTATTTTATGAATCAA+TGG | - | Chr2:9026679-9026698 | None:intergenic | 15.0% |
| !!! | CATTTATTTTATGAATCAAT+GGG | - | Chr2:9026678-9026697 | None:intergenic | 15.0% |
| !!! | TATTTATAAGATTTTTTCCT+TGG | + | Chr2:9027354-9027373 | MsG0280006988.01.T01:intron | 15.0% |
| !! | AAGACATTCAAATCAAAATT+AGG | + | Chr2:9027071-9027090 | MsG0280006988.01.T01:intron | 20.0% |
| !! | ACTATGGATAACAAAAAATA+TGG | - | Chr2:9027270-9027289 | None:intergenic | 20.0% |
| !! | GATCAAATTGTAAATGTTAT+AGG | + | Chr2:9027154-9027173 | MsG0280006988.01.T01:intron | 20.0% |
| !! | GGAAAAAATCTTATAAATAC+CGG | - | Chr2:9027353-9027372 | None:intergenic | 20.0% |
| !! | TAGATATAATTCATCTTTGT+AGG | + | Chr2:9027047-9027066 | MsG0280006988.01.T01:intron | 20.0% |
| !! | TATTATATTTGTAGATTTGC+CGG | + | Chr2:9027388-9027407 | MsG0280006988.01.T01:CDS | 20.0% |
| !! | TGTTTCTTAGTTATTAAACT+GGG | - | Chr2:9026823-9026842 | None:intergenic | 20.0% |
| !! | TTAACCAAAAGTGAAAAATT+TGG | - | Chr2:9026380-9026399 | None:intergenic | 20.0% |
| !!! | ACTTCATTTGATTGAAATTT+TGG | - | Chr2:9027625-9027644 | None:intergenic | 20.0% |
| !!! | CATATTCATATTTGTTGTTA+AGG | + | Chr2:9026121-9026140 | MsG0280006988.01.T01:intron | 20.0% |
| !!! | TTATCCATAGTTAGATTTTT+CGG | + | Chr2:9027279-9027298 | MsG0280006988.01.T01:intron | 20.0% |
| !!! | TTGTTTCTTAGTTATTAAAC+TGG | - | Chr2:9026824-9026843 | None:intergenic | 20.0% |
| ! | AAAACCGAAAAATCTAACTA+TGG | - | Chr2:9027286-9027305 | None:intergenic | 25.0% |
| ! | AAATCTTCACCAACTATATA+GGG | - | Chr2:9027026-9027045 | None:intergenic | 25.0% |
| ! | AATTACCAATTTCAAGCAAA+AGG | - | Chr2:9026275-9026294 | None:intergenic | 25.0% |
| ! | CAATTTGATTATGTTACCAT+TGG | + | Chr2:9027731-9027750 | MsG0280006988.01.T01:intron | 25.0% |
| ! | GAAATATTACACTTTCTTCA+GGG | + | Chr2:9028058-9028077 | MsG0280006988.01.T01:intron | 25.0% |
| ! | TAAAAAAGGAGGAATACAAT+GGG | + | Chr2:9027188-9027207 | MsG0280006988.01.T01:CDS | 25.0% |
| ! | TCTTTGTTACTAAATGTTCA+TGG | + | Chr2:9026957-9026976 | MsG0280006988.01.T01:intron | 25.0% |
| ! | TGAAATATTACACTTTCTTC+AGG | + | Chr2:9028057-9028076 | MsG0280006988.01.T01:intron | 25.0% |
| ! | TTAAAAAAGGAGGAATACAA+TGG | + | Chr2:9027187-9027206 | MsG0280006988.01.T01:CDS | 25.0% |
| ! | TTATGCATAAATCTTTGTAG+TGG | + | Chr2:9027587-9027606 | MsG0280006988.01.T01:intron | 25.0% |
| !! | AAACAGAAACATTTTCTCAA+AGG | + | Chr2:9026894-9026913 | MsG0280006988.01.T01:intron | 25.0% |
| !! | ACAAAGTTTAGTTCAACTTA+TGG | + | Chr2:9025920-9025939 | MsG0280006988.01.T01:CDS | 25.0% |
| !! | CAAAGTTTAGTTCAACTTAT+GGG | + | Chr2:9025921-9025940 | MsG0280006988.01.T01:CDS | 25.0% |
| !! | CTTTCCAAATTTTTCACTTT+TGG | + | Chr2:9026373-9026392 | MsG0280006988.01.T01:intron | 25.0% |
| !! | GAAGAAAGTGTAATATTTCA+TGG | - | Chr2:9028057-9028076 | None:intergenic | 25.0% |
| !! | TTTGTAGACTTTTGTGTTTT+AGG | - | Chr2:9026652-9026671 | None:intergenic | 25.0% |
| !!! | ATATTTGTTGTTAAGGTATG+TGG | + | Chr2:9026128-9026147 | MsG0280006988.01.T01:intron | 25.0% |
| !!! | GATAAGCATTTGAAATTTTG+TGG | + | Chr2:9026406-9026425 | MsG0280006988.01.T01:intron | 25.0% |
| !!! | TATTTGTTGTTAAGGTATGT+GGG | + | Chr2:9026129-9026148 | MsG0280006988.01.T01:intron | 25.0% |
| AACAATCATTTGGTCTCAAT+TGG | + | Chr2:9026336-9026355 | MsG0280006988.01.T01:intron | 30.0% | |
| AATTACGTCGTATAGTTCAT+CGG | - | Chr2:9028164-9028183 | None:intergenic | 30.0% | |
| AATTTGCAGAACTAGTTGAA+AGG | - | Chr2:9027887-9027906 | None:intergenic | 30.0% | |
| ATTGTTCAAGAAATTGCACA+AGG | + | Chr2:9027688-9027707 | MsG0280006988.01.T01:CDS | 30.0% | |
| CAACTATATAGGGCTTAATT+AGG | - | Chr2:9027016-9027035 | None:intergenic | 30.0% | |
| CTAATTAAGCCCTATATAGT+TGG | + | Chr2:9027014-9027033 | MsG0280006988.01.T01:intron | 30.0% | |
| GAAATCTTCACCAACTATAT+AGG | - | Chr2:9027027-9027046 | None:intergenic | 30.0% | |
| TGTTTGCAGGAAATGAAAAA+GGG | + | Chr2:9027795-9027814 | MsG0280006988.01.T01:intron | 30.0% | |
| TTCAACATACAGTAAACCAA+TGG | - | Chr2:9027750-9027769 | None:intergenic | 30.0% | |
| TTGTTTGCAGGAAATGAAAA+AGG | + | Chr2:9027794-9027813 | MsG0280006988.01.T01:intron | 30.0% | |
| ! | TACATAGTTTTTCTCCTTTC+TGG | - | Chr2:9028110-9028129 | None:intergenic | 30.0% |
| ! | TCAAATGAAGTTTTCATTGC+TGG | + | Chr2:9027634-9027653 | MsG0280006988.01.T01:CDS | 30.0% |
| ! | TTTTCATTTCCTGCAAACAA+GGG | - | Chr2:9027794-9027813 | None:intergenic | 30.0% |
| ! | TTTTTCATTTCCTGCAAACA+AGG | - | Chr2:9027795-9027814 | None:intergenic | 30.0% |
| !! | AGTGGATTATGTTAGTTTCT+GGG | + | Chr2:9026767-9026786 | MsG0280006988.01.T01:intron | 30.0% |
| !! | TAGTGGATTATGTTAGTTTC+TGG | + | Chr2:9026766-9026785 | MsG0280006988.01.T01:intron | 30.0% |
| !!! | TATAAGATTTTTTCCTTGGC+AGG | + | Chr2:9027358-9027377 | MsG0280006988.01.T01:intron | 30.0% |
| AAGTATCACTCTCTCATGTT+AGG | + | Chr2:9027854-9027873 | MsG0280006988.01.T01:intron | 35.0% | |
| ACCAAGTTCATCAATTTCTC+AGG | + | Chr2:9027477-9027496 | MsG0280006988.01.T01:CDS | 35.0% | |
| AGGTCCACTTGAGTTAAAAA+AGG | + | Chr2:9027174-9027193 | MsG0280006988.01.T01:intron | 35.0% | |
| AGTTCATCAATTTCTCAGGA+AGG | + | Chr2:9027481-9027500 | MsG0280006988.01.T01:CDS | 35.0% | |
| GCAATTTCTTGAACAATGAC+AGG | - | Chr2:9027685-9027704 | None:intergenic | 35.0% | |
| GCATAAATCTTTGTAGTGGT+TGG | + | Chr2:9027591-9027610 | MsG0280006988.01.T01:intron | 35.0% | |
| GCATTGAGCAAACAATCATT+TGG | + | Chr2:9026326-9026345 | MsG0280006988.01.T01:intron | 35.0% | |
| GGTTTCAAGCATAAAAGGAA+GGG | - | Chr2:9026044-9026063 | None:intergenic | 35.0% | |
| GTACAATCTCTCAATGTTAG+TGG | + | Chr2:9026749-9026768 | MsG0280006988.01.T01:intron | 35.0% | |
| GTCGATGCTTTATAGTCTAT+AGG | - | Chr2:9027966-9027985 | None:intergenic | 35.0% | |
| GTTTCAAGCATAAAAGGAAG+GGG | - | Chr2:9026043-9026062 | None:intergenic | 35.0% | |
| GTTTGCAGGAAATGAAAAAG+GGG | + | Chr2:9027796-9027815 | MsG0280006988.01.T01:intron | 35.0% | |
| TCCACTTGAGTTAAAAAAGG+AGG | + | Chr2:9027177-9027196 | MsG0280006988.01.T01:CDS | 35.0% | |
| TCCTGAGAAATTGATGAACT+TGG | - | Chr2:9027481-9027500 | None:intergenic | 35.0% | |
| TCTATAGTGAAGTTTCTTCC+TGG | + | Chr2:9026007-9026026 | MsG0280006988.01.T01:CDS | 35.0% | |
| TGAATCAGAGAAGAATCCAA+AGG | + | Chr2:9026194-9026213 | MsG0280006988.01.T01:CDS | 35.0% | |
| TTTCTTCAGGGATACTTGTT+GGG | + | Chr2:9028070-9028089 | MsG0280006988.01.T01:intron | 35.0% | |
| ! | CTTCCTTTTATGCTTGAAAC+CGG | + | Chr2:9026043-9026062 | MsG0280006988.01.T01:CDS | 35.0% |
| ! | GGTAATTGCAGCTTTACTTT+TGG | + | Chr2:9026288-9026307 | MsG0280006988.01.T01:intron | 35.0% |
| ! | GTTTAGTTCAACTTATGGGA+AGG | + | Chr2:9025925-9025944 | MsG0280006988.01.T01:CDS | 35.0% |
| ! | TATGTAATCCCTTTTGCTCA+TGG | + | Chr2:9028124-9028143 | MsG0280006988.01.T01:CDS | 35.0% |
| ! | TTCCTTTTATGCTTGAAACC+GGG | + | Chr2:9026044-9026063 | MsG0280006988.01.T01:CDS | 35.0% |
| !! | GATACTTTAAGATGTTGACC+TGG | - | Chr2:9027841-9027860 | None:intergenic | 35.0% |
| !!! | TCCTCCTTTTTTAACTCAAG+TGG | - | Chr2:9027181-9027200 | None:intergenic | 35.0% |
| AACATTCATGGACAAAGGTG+GGG | + | Chr2:9027236-9027255 | MsG0280006988.01.T01:CDS | 40.0% | |
| AACCCGGTTTCAAGCATAAA+AGG | - | Chr2:9026049-9026068 | None:intergenic | 40.0% | |
| AAGTTTCTTCCTGGATTCCA+AGG | + | Chr2:9026016-9026035 | MsG0280006988.01.T01:CDS | 40.0% | |
| AGGATGATCCTCTCATACTA+TGG | + | Chr2:9026214-9026233 | MsG0280006988.01.T01:CDS | 40.0% | |
| AGTATGAGAGGATCATCCTT+TGG | - | Chr2:9026213-9026232 | None:intergenic | 40.0% | |
| ATAATACTACTCACCTGCCA+AGG | - | Chr2:9027374-9027393 | None:intergenic | 40.0% | |
| CAACATTCATGGACAAAGGT+GGG | + | Chr2:9027235-9027254 | MsG0280006988.01.T01:CDS | 40.0% | |
| CGGTTTCAAGCATAAAAGGA+AGG | - | Chr2:9026045-9026064 | None:intergenic | 40.0% | |
| CTTTCTTCAGGGATACTTGT+TGG | + | Chr2:9028069-9028088 | MsG0280006988.01.T01:intron | 40.0% | |
| GTCTACCTAATCTGATCTTG+AGG | + | Chr2:9027212-9027231 | MsG0280006988.01.T01:CDS | 40.0% | |
| TCTTGAACAATGACAGGAAC+AGG | - | Chr2:9027679-9027698 | None:intergenic | 40.0% | |
| TGATCTTGAGGCAACATTCA+TGG | + | Chr2:9027224-9027243 | MsG0280006988.01.T01:CDS | 40.0% | |
| TGTAAAGCCATGAACTAACC+CGG | - | Chr2:9026065-9026084 | None:intergenic | 40.0% | |
| TGTTGCCTCAAGATCAGATT+AGG | - | Chr2:9027220-9027239 | None:intergenic | 40.0% | |
| TTGACCTGGAGATTTATCCA+TGG | - | Chr2:9027827-9027846 | None:intergenic | 40.0% | |
| TTGTTAAGGTATGTGGGAGT+GGG | + | Chr2:9026135-9026154 | MsG0280006988.01.T01:intron | 40.0% | |
| ! | AATCCCTTTTGCTCATGGAA+TGG | + | Chr2:9028129-9028148 | MsG0280006988.01.T01:CDS | 40.0% |
| ! | ATCCCTTTTGCTCATGGAAT+GGG | + | Chr2:9028130-9028149 | MsG0280006988.01.T01:CDS | 40.0% |
| ! | TCACAAATTCCCTTGTTTGC+AGG | + | Chr2:9027782-9027801 | MsG0280006988.01.T01:intron | 40.0% |
| ! | TTCTTCAGGGATACTTGTTG+GGG | + | Chr2:9028071-9028090 | MsG0280006988.01.T01:intron | 40.0% |
| !! | TCTGGCCTTTTGCTTGAAAT+TGG | + | Chr2:9026267-9026286 | MsG0280006988.01.T01:CDS | 40.0% |
| !! | TGCTTTCAAGTTGCAACATG+TGG | + | Chr2:9025983-9026002 | MsG0280006988.01.T01:CDS | 40.0% |
| ACATTCATGGACAAAGGTGG+GGG | + | Chr2:9027237-9027256 | MsG0280006988.01.T01:CDS | 45.0% | |
| ACTTATGCCACAGCAGAATC+CGG | + | Chr2:9027425-9027444 | MsG0280006988.01.T01:CDS | 45.0% | |
| AGTCCCATTCCATGAGCAAA+AGG | - | Chr2:9028136-9028155 | None:intergenic | 45.0% | |
| ATGAAAAAGGGGTCCAACCA+TGG | + | Chr2:9027807-9027826 | MsG0280006988.01.T01:CDS | 45.0% | |
| ATTGCTGGTGACTCATACTC+TGG | + | Chr2:9027649-9027668 | MsG0280006988.01.T01:CDS | 45.0% | |
| CCAACCATGGATAAATCTCC+AGG | + | Chr2:9027820-9027839 | MsG0280006988.01.T01:CDS | 45.0% | |
| CCTGGAGATTTATCCATGGT+TGG | - | Chr2:9027823-9027842 | None:intergenic | 45.0% | |
| GAATGCTGCAACAACCAGAA+AGG | + | Chr2:9028093-9028112 | MsG0280006988.01.T01:CDS | 45.0% | |
| GAGGCAACATTCATGGACAA+AGG | + | Chr2:9027231-9027250 | MsG0280006988.01.T01:CDS | 45.0% | |
| GCAACATTCATGGACAAAGG+TGG | + | Chr2:9027234-9027253 | MsG0280006988.01.T01:CDS | 45.0% | |
| GTCCCATTCCATGAGCAAAA+GGG | - | Chr2:9028135-9028154 | None:intergenic | 45.0% | |
| GTTGTTAAGGTATGTGGGAG+TGG | + | Chr2:9026134-9026153 | MsG0280006988.01.T01:intron | 45.0% | |
| TAAGTGAAGCCTGTGGAAAC+CGG | - | Chr2:9027410-9027429 | None:intergenic | 45.0% | |
| TGAATCGCTTCGTTTAGCAC+CGG | - | Chr2:9027447-9027466 | None:intergenic | 45.0% | |
| !! | CTTGAAACCGGGTTAGTTCA+TGG | + | Chr2:9026055-9026074 | MsG0280006988.01.T01:intron | 45.0% |
| !! | ATAAAATAAATGTTAATTTA+TGG | + | Chr2:9026686-9026705 | MsG0280006988.01.T01:intron | 5.0% |
| !! | TAAAATAAATGTTAATTTAT+GGG | + | Chr2:9026687-9026706 | MsG0280006988.01.T01:intron | 5.0% |
| CCAGTGAGCCATAGTATGAG+AGG | - | Chr2:9026225-9026244 | None:intergenic | 50.0% | |
| CCTCTCATACTATGGCTCAC+TGG | + | Chr2:9026222-9026241 | MsG0280006988.01.T01:CDS | 50.0% | |
| CTCATACTATGGCTCACTGG+TGG | + | Chr2:9026225-9026244 | MsG0280006988.01.T01:CDS | 50.0% | |
| GCATAAAAGGAAGGGGTCCT+TGG | - | Chr2:9026036-9026055 | None:intergenic | 50.0% | |
| TGTGGCATAAGTGAAGCCTG+TGG | - | Chr2:9027417-9027436 | None:intergenic | 50.0% | |
| ! | TTTAGCACCGGATTCTGCTG+TGG | - | Chr2:9027435-9027454 | None:intergenic | 50.0% |
| !! | GTAGATTTGCCGGTTTCCAC+AGG | + | Chr2:9027398-9027417 | MsG0280006988.01.T01:CDS | 50.0% |
| CCAGACAAAGCAGAGCAACC+AGG | - | Chr2:9026252-9026271 | None:intergenic | 55.0% | |
| CCTGGTTGCTCTGCTTTGTC+TGG | + | Chr2:9026249-9026268 | MsG0280006988.01.T01:CDS | 55.0% | |
| GGAAGGGGTCCTTGGAATCC+AGG | - | Chr2:9026028-9026047 | None:intergenic | 60.0% | |
| ! | CTATGGCTCACTGGTGGACC+TGG | + | Chr2:9026231-9026250 | MsG0280006988.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 9025917 | 9028192 | 9025917 | ID=MsG0280006988.01;Name=MsG0280006988.01 |
| Chr2 | mRNA | 9025917 | 9028192 | 9025917 | ID=MsG0280006988.01.T01;Parent=MsG0280006988.01;Name=MsG0280006988.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|7|0|251 |
| Chr2 | exon | 9025917 | 9026065 | 9025917 | ID=MsG0280006988.01.T01:exon:2576;Parent=MsG0280006988.01.T01 |
| Chr2 | exon | 9026143 | 9026288 | 9026143 | ID=MsG0280006988.01.T01:exon:2577;Parent=MsG0280006988.01.T01 |
| Chr2 | exon | 9027176 | 9027258 | 9027176 | ID=MsG0280006988.01.T01:exon:2578;Parent=MsG0280006988.01.T01 |
| Chr2 | exon | 9027380 | 9027502 | 9027380 | ID=MsG0280006988.01.T01:exon:2579;Parent=MsG0280006988.01.T01 |
| Chr2 | exon | 9027607 | 9027709 | 9027607 | ID=MsG0280006988.01.T01:exon:2580;Parent=MsG0280006988.01.T01 |
| Chr2 | exon | 9027804 | 9027841 | 9027804 | ID=MsG0280006988.01.T01:exon:2581;Parent=MsG0280006988.01.T01 |
| Chr2 | exon | 9028079 | 9028192 | 9028079 | ID=MsG0280006988.01.T01:exon:2582;Parent=MsG0280006988.01.T01 |
| Chr2 | CDS | 9025917 | 9026065 | 9025917 | ID=MsG0280006988.01.T01:cds;Parent=MsG0280006988.01.T01 |
| Chr2 | CDS | 9026143 | 9026288 | 9026143 | ID=MsG0280006988.01.T01:cds;Parent=MsG0280006988.01.T01 |
| Chr2 | CDS | 9027176 | 9027258 | 9027176 | ID=MsG0280006988.01.T01:cds;Parent=MsG0280006988.01.T01 |
| Chr2 | CDS | 9027380 | 9027502 | 9027380 | ID=MsG0280006988.01.T01:cds;Parent=MsG0280006988.01.T01 |
| Chr2 | CDS | 9027607 | 9027709 | 9027607 | ID=MsG0280006988.01.T01:cds;Parent=MsG0280006988.01.T01 |
| Chr2 | CDS | 9027804 | 9027841 | 9027804 | ID=MsG0280006988.01.T01:cds;Parent=MsG0280006988.01.T01 |
| Chr2 | CDS | 9028079 | 9028192 | 9028079 | ID=MsG0280006988.01.T01:cds;Parent=MsG0280006988.01.T01 |
| Gene Sequence |
| Protein sequence |
