Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007504.01.T01 | XP_013462938.1 | 100 | 73 | 0 | 0 | 1 | 73 | 175 | 247 | 6.64E-45 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007504.01.T01 | A0A072V6K8 | 100.000 | 73 | 0 | 0 | 1 | 73 | 175 | 247 | 3.17e-45 | 155 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048889.01 | MsG0280007504.01 | 0.823192 | 1.580717e-53 | 1.351654e-50 |
| MsG0080048992.01 | MsG0280007504.01 | -0.814522 | 1.476156e-51 | 9.927858e-49 |
| MsG0080049023.01 | MsG0280007504.01 | -0.801312 | 9.555839e-49 | 4.549073e-46 |
| MsG0180000096.01 | MsG0280007504.01 | 0.809770 | 1.605299e-50 | 9.509224e-48 |
| MsG0180000466.01 | MsG0280007504.01 | 0.815859 | 7.450654e-52 | 5.196165e-49 |
| MsG0180000719.01 | MsG0280007504.01 | -0.811585 | 6.503720e-51 | 4.041403e-48 |
| MsG0180001054.01 | MsG0280007504.01 | -0.824928 | 6.188710e-54 | 5.559820e-51 |
| MsG0180001169.01 | MsG0280007504.01 | 0.816906 | 4.342260e-52 | 3.116548e-49 |
| MsG0180001615.01 | MsG0280007504.01 | -0.826371 | 2.814259e-54 | 2.634376e-51 |
| MsG0180003258.01 | MsG0280007504.01 | 0.824180 | 9.282187e-54 | 8.161408e-51 |
| MsG0180003484.01 | MsG0280007504.01 | 0.833165 | 6.236866e-56 | 7.124339e-53 |
| MsG0180003905.01 | MsG0280007504.01 | 0.816598 | 5.092641e-52 | 3.624328e-49 |
| MsG0180004064.01 | MsG0280007504.01 | 0.857314 | 1.776471e-62 | 4.366084e-59 |
| MsG0180004322.01 | MsG0280007504.01 | -0.805255 | 1.458128e-49 | 7.677719e-47 |
| MsG0180004580.01 | MsG0280007504.01 | -0.805821 | 1.109476e-49 | 5.927867e-47 |
| MsG0180004581.01 | MsG0280007504.01 | -0.814393 | 1.576668e-51 | 1.056693e-48 |
| MsG0180004737.01 | MsG0280007504.01 | -0.820525 | 6.551303e-53 | 5.195914e-50 |
| MsG0180004787.01 | MsG0280007504.01 | -0.807352 | 5.270847e-50 | 2.929264e-47 |
| MsG0180004828.01 | MsG0280007504.01 | 0.805010 | 1.641125e-49 | 8.587256e-47 |
| MsG0180004830.01 | MsG0280007504.01 | 0.810687 | 1.018372e-50 | 6.179646e-48 |
| MsG0180005267.01 | MsG0280007504.01 | 0.806518 | 7.911238e-50 | 4.302815e-47 |
| MsG0180005369.01 | MsG0280007504.01 | -0.829069 | 6.326119e-55 | 6.404314e-52 |
| MsG0180005762.01 | MsG0280007504.01 | 0.814171 | 1.764644e-51 | 1.175503e-48 |
| MsG0180005767.01 | MsG0280007504.01 | -0.822850 | 1.899904e-53 | 1.608995e-50 |
| MsG0180005819.01 | MsG0280007504.01 | 0.826294 | 2.934989e-54 | 2.741207e-51 |
| MsG0180005984.01 | MsG0280007504.01 | 0.813892 | 2.032988e-51 | 1.344105e-48 |
| MsG0180006183.01 | MsG0280007504.01 | 0.838731 | 2.416067e-57 | 3.265153e-54 |
| MsG0280006316.01 | MsG0280007504.01 | 0.828259 | 9.930577e-55 | 9.818737e-52 |
| MsG0280006381.01 | MsG0280007504.01 | -0.809539 | 1.800349e-50 | 1.059877e-47 |
| MsG0280006534.01 | MsG0280007504.01 | -0.806679 | 7.317828e-50 | 3.996270e-47 |
| MsG0280006575.01 | MsG0280007504.01 | 0.809733 | 1.635623e-50 | 9.679061e-48 |
| MsG0280006851.01 | MsG0280007504.01 | 0.807640 | 4.580326e-50 | 2.564513e-47 |
| MsG0280007084.01 | MsG0280007504.01 | 0.833612 | 4.825867e-56 | 5.586274e-53 |
| MsG0280007288.01 | MsG0280007504.01 | -0.834301 | 3.244522e-56 | 3.834659e-53 |
| MsG0280007291.01 | MsG0280007504.01 | -0.829677 | 4.502051e-55 | 4.640338e-52 |
| MsG0280007504.01 | MsG0280007505.01 | 0.936977 | 7.310203e-98 | 6.451613e-93 |
| MsG0280007504.01 | MsG0280008263.01 | 0.822267 | 2.595996e-53 | 2.162288e-50 |
| MsG0280007504.01 | MsG0280009079.01 | -0.822908 | 1.841443e-53 | 1.562049e-50 |
| MsG0280007504.01 | MsG0280009094.01 | -0.815739 | 7.921596e-52 | 5.507255e-49 |
| MsG0280007504.01 | MsG0280009526.01 | 0.845965 | 2.922479e-59 | 4.954111e-56 |
| MsG0280007504.01 | MsG0280009864.01 | -0.812025 | 5.217793e-51 | 3.280595e-48 |
| MsG0280007504.01 | MsG0280010617.01 | 0.828614 | 8.150915e-55 | 8.143399e-52 |
| MsG0280007504.01 | MsG0280010803.01 | -0.829766 | 4.285013e-55 | 4.428315e-52 |
| MsG0280007504.01 | MsG0280010994.01 | -0.847891 | 8.677051e-60 | 1.564686e-56 |
| MsG0280007504.01 | MsG0280011268.01 | 0.804919 | 1.714404e-49 | 8.950648e-47 |
| MsG0280007504.01 | MsG0280011269.01 | 0.803550 | 3.303915e-49 | 1.665186e-46 |
| MsG0280007504.01 | MsG0280011281.01 | -0.817684 | 2.903065e-52 | 2.128424e-49 |
| MsG0280007504.01 | MsG0380013843.01 | 0.808391 | 3.169003e-50 | 1.809791e-47 |
| MsG0280007504.01 | MsG0380014231.01 | -0.833975 | 3.916436e-56 | 4.584061e-53 |
| MsG0280007504.01 | MsG0380014639.01 | -0.825904 | 3.635008e-54 | 3.357712e-51 |
| MsG0280007504.01 | MsG0380014642.01 | -0.821886 | 3.180958e-53 | 2.620885e-50 |
| MsG0280007504.01 | MsG0380014735.01 | -0.806033 | 1.001027e-49 | 5.377565e-47 |
| MsG0280007504.01 | MsG0380015402.01 | 0.825554 | 4.400176e-54 | 4.023853e-51 |
| MsG0280007504.01 | MsG0380015446.01 | 0.818723 | 1.689437e-52 | 1.274548e-49 |
| MsG0280007504.01 | MsG0380015828.01 | -0.822030 | 2.945746e-53 | 2.436907e-50 |
| MsG0280007504.01 | MsG0380016031.01 | 0.862671 | 4.295337e-64 | 1.268154e-60 |
| MsG0280007504.01 | MsG0380016096.01 | -0.833632 | 4.770272e-56 | 5.525277e-53 |
| MsG0280007504.01 | MsG0380016250.01 | 0.815524 | 8.848253e-52 | 6.114885e-49 |
| MsG0280007504.01 | MsG0380016456.01 | -0.812241 | 4.681822e-51 | 2.961093e-48 |
| MsG0280007504.01 | MsG0380016760.01 | 0.800511 | 1.392790e-48 | 6.497101e-46 |
| MsG0280007504.01 | MsG0380016819.01 | 0.825602 | 4.285457e-54 | 3.924573e-51 |
| MsG0280007504.01 | MsG0380016845.01 | 0.805322 | 1.411510e-49 | 7.445417e-47 |
| MsG0280007504.01 | MsG0380017030.01 | 0.801178 | 1.017838e-48 | 4.829072e-46 |
| MsG0280007504.01 | MsG0380017156.01 | 0.814181 | 1.755623e-51 | 1.169836e-48 |
| MsG0280007504.01 | MsG0380017385.01 | -0.824045 | 9.983666e-54 | 8.744259e-51 |
| MsG0280007504.01 | MsG0380017483.01 | 0.855429 | 6.344962e-62 | 1.464545e-58 |
| MsG0280007504.01 | MsG0380017773.01 | -0.807234 | 5.584988e-50 | 3.094246e-47 |
| MsG0280007504.01 | MsG0380017812.01 | -0.815219 | 1.034254e-51 | 7.087383e-49 |
| MsG0280007504.01 | MsG0380017826.01 | 0.822645 | 2.120882e-53 | 1.785780e-50 |
| MsG0280007504.01 | MsG0380018035.01 | -0.823173 | 1.596903e-53 | 1.364755e-50 |
| MsG0280007504.01 | MsG0480018362.01 | 0.848724 | 5.107082e-60 | 9.460546e-57 |
| MsG0280007504.01 | MsG0480018486.01 | 0.815353 | 9.653585e-52 | 6.640265e-49 |
| MsG0280007504.01 | MsG0480018658.01 | -0.801230 | 9.933498e-49 | 4.719002e-46 |
| MsG0280007504.01 | MsG0480019171.01 | 0.826622 | 2.452264e-54 | 2.311799e-51 |
| MsG0280007504.01 | MsG0480021151.01 | -0.817971 | 2.500517e-52 | 1.847711e-49 |
| MsG0280007504.01 | MsG0480021226.01 | 0.816778 | 4.640265e-52 | 3.318752e-49 |
| MsG0280007504.01 | MsG0480021234.01 | 0.800378 | 1.482448e-48 | 6.892374e-46 |
| MsG0280007504.01 | MsG0480021740.01 | 0.829941 | 3.884236e-55 | 4.034090e-52 |
| MsG0280007504.01 | MsG0480023067.01 | 0.808558 | 2.920412e-50 | 1.675014e-47 |
| MsG0280007504.01 | MsG0480023125.01 | 0.805358 | 1.387266e-49 | 7.324438e-47 |
| MsG0280007504.01 | MsG0480023152.01 | -0.812996 | 3.200590e-51 | 2.065174e-48 |
| MsG0280007504.01 | MsG0480023173.01 | -0.816616 | 5.045128e-52 | 3.592315e-49 |
| MsG0280007504.01 | MsG0480023322.01 | 0.803715 | 3.054187e-49 | 1.545710e-46 |
| MsG0280007504.01 | MsG0480023386.01 | -0.825365 | 4.877861e-54 | 4.436675e-51 |
| MsG0280007504.01 | MsG0480023575.01 | 0.837839 | 4.101202e-57 | 5.394063e-54 |
| MsG0280007504.01 | MsG0480023851.01 | -0.828903 | 6.941199e-55 | 6.992593e-52 |
| MsG0280007504.01 | MsG0580024980.01 | 0.827260 | 1.726267e-54 | 1.658030e-51 |
| MsG0280007504.01 | MsG0580025023.01 | 0.808913 | 2.451250e-50 | 1.419092e-47 |
| MsG0280007504.01 | MsG0580025633.01 | 0.825448 | 4.660966e-54 | 4.249313e-51 |
| MsG0280007504.01 | MsG0580026029.01 | 0.822026 | 2.951799e-53 | 2.441648e-50 |
| MsG0280007504.01 | MsG0580026073.01 | -0.807449 | 5.027066e-50 | 2.800850e-47 |
| MsG0280007504.01 | MsG0580026492.01 | 0.809581 | 1.763446e-50 | 1.039362e-47 |
| MsG0280007504.01 | MsG0580027135.01 | 0.835754 | 1.395957e-56 | 1.723295e-53 |
| MsG0280007504.01 | MsG0580027276.01 | -0.825258 | 5.170779e-54 | 4.689084e-51 |
| MsG0280007504.01 | MsG0580028041.01 | 0.851649 | 7.732263e-61 | 1.575631e-57 |
| MsG0280007504.01 | MsG0580028159.01 | -0.819891 | 9.150926e-53 | 7.131853e-50 |
| MsG0280007504.01 | MsG0580030141.01 | 0.804333 | 2.271465e-49 | 1.168008e-46 |
| MsG0280007504.01 | MsG0680030644.01 | -0.807014 | 6.216674e-50 | 3.424598e-47 |
| MsG0280007504.01 | MsG0680031204.01 | -0.819001 | 1.460415e-52 | 1.110429e-49 |
| MsG0280007504.01 | MsG0680031356.01 | 0.822158 | 2.750637e-53 | 2.283878e-50 |
| MsG0280007504.01 | MsG0680035584.01 | -0.812837 | 3.467388e-51 | 2.227741e-48 |
| MsG0280007504.01 | MsG0780037458.01 | -0.828729 | 7.646516e-55 | 7.664176e-52 |
| MsG0280007504.01 | MsG0780037999.01 | 0.800928 | 1.145054e-48 | 5.398507e-46 |
| MsG0280007504.01 | MsG0780038305.01 | 0.830544 | 2.766225e-55 | 2.923363e-52 |
| MsG0280007504.01 | MsG0780038914.01 | 0.807555 | 4.774384e-50 | 2.667278e-47 |
| MsG0280007504.01 | MsG0780038919.01 | 0.832064 | 1.169809e-55 | 1.293191e-52 |
| MsG0280007504.01 | MsG0780039836.01 | -0.810509 | 1.112635e-50 | 6.719370e-48 |
| MsG0280007504.01 | MsG0780040158.01 | -0.801054 | 1.079163e-48 | 5.104293e-46 |
| MsG0280007504.01 | MsG0780040429.01 | -0.801634 | 8.207279e-49 | 3.938902e-46 |
| MsG0280007504.01 | MsG0780040660.01 | 0.814456 | 1.526918e-51 | 1.025039e-48 |
| MsG0280007504.01 | MsG0780040670.01 | 0.810097 | 1.365651e-50 | 8.158581e-48 |
| MsG0280007504.01 | MsG0780040716.01 | 0.818367 | 2.034376e-52 | 1.519916e-49 |
| MsG0280007504.01 | MsG0780040719.01 | 0.807697 | 4.454145e-50 | 2.497555e-47 |
| MsG0280007504.01 | MsG0780040847.01 | 0.806551 | 7.785789e-50 | 4.238246e-47 |
| MsG0280007504.01 | MsG0780041436.01 | 0.830006 | 3.744282e-55 | 3.895825e-52 |
| MsG0280007504.01 | MsG0780041691.01 | -0.815105 | 1.095983e-51 | 7.487257e-49 |
| MsG0280007504.01 | MsG0880043515.01 | -0.807069 | 6.052130e-50 | 3.338674e-47 |
| MsG0280007504.01 | MsG0880043550.01 | 0.837769 | 4.276123e-57 | 5.612225e-54 |
| MsG0280007504.01 | MsG0880043669.01 | 0.819760 | 9.803980e-53 | 7.612847e-50 |
| MsG0280007504.01 | MsG0880044545.01 | -0.807962 | 3.912149e-50 | 2.208962e-47 |
| MsG0280007504.01 | MsG0880044548.01 | -0.834146 | 3.548065e-56 | 4.173259e-53 |
| MsG0280007504.01 | MsG0880044968.01 | -0.833928 | 4.023034e-56 | 4.702120e-53 |
| MsG0280007504.01 | MsG0880045356.01 | 0.812632 | 3.845204e-51 | 2.457438e-48 |
| MsG0280007504.01 | MsG0880045725.01 | 0.823876 | 1.093757e-53 | 9.535404e-51 |
| MsG0280007504.01 | MsG0880045755.01 | -0.810879 | 9.256133e-51 | 5.645757e-48 |
| MsG0280007504.01 | MsG0880045761.01 | -0.822734 | 2.022070e-53 | 1.706845e-50 |
| MsG0280007504.01 | MsG0880045991.01 | 0.839157 | 1.873784e-57 | 2.565266e-54 |
| MsG0280007504.01 | MsG0880046010.01 | -0.847067 | 1.462145e-59 | 2.568220e-56 |
| MsG0280007504.01 | MsG0880046174.01 | -0.802860 | 4.591639e-49 | 2.273498e-46 |
| MsG0280007504.01 | MsG0880046189.01 | -0.826493 | 2.631493e-54 | 2.471603e-51 |
| MsG0280007504.01 | MsG0880046341.01 | -0.806632 | 7.485763e-50 | 4.083017e-47 |
| MsG0280007504.01 | MsG0880047090.01 | 0.856431 | 3.233009e-62 | 7.715544e-59 |
| MsG0280007504.01 | MsG0880047450.01 | 0.810138 | 1.337674e-50 | 8.000058e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007504.01.T01 | MTR_2g026670 | 100.000 | 73 | 0 | 0 | 1 | 73 | 175 | 247 | 8.04e-49 | 155 |
| MsG0280007504.01.T01 | MTR_4g133900 | 64.103 | 78 | 19 | 3 | 2 | 74 | 185 | 258 | 1.05e-22 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 36 sgRNAs with CRISPR-Local
Find 34 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGTCCACCATACTGATT+AGG | 0.374070 | 2:+16384309 | None:intergenic |
| TGGAGGTGGGCCGTGTTATG+TGG | 0.393001 | 2:-16384241 | MsG0280007504.01.T01:CDS |
| TATGGGCCGTATGGCCCAAC+AGG | 0.440070 | 2:+16384333 | None:intergenic |
| CCACCATACTGATTAGGGTA+TGG | 0.446251 | 2:+16384315 | None:intergenic |
| GGAACATAACACATCCCAAC+TGG | 0.447009 | 2:+16384375 | None:intergenic |
| CCACCATAGCTATCGTATAC+TGG | 0.450124 | 2:+16384261 | None:intergenic |
| GGCCCATACCCTAATCAGTA+TGG | 0.453969 | 2:-16384318 | MsG0280007504.01.T01:CDS |
| TCCACAAATGCCACCACCTA+TGG | 0.459788 | 2:-16384403 | None:intergenic |
| CACCTATGGCGGTTCCAGTT+GGG | 0.463164 | 2:-16384389 | MsG0280007504.01.T01:CDS |
| CCACCTATGGCGGTTCCAGT+TGG | 0.463360 | 2:-16384390 | MsG0280007504.01.T01:CDS |
| GGTAGACCTGTTGGGCCATA+CGG | 0.476910 | 2:-16384339 | MsG0280007504.01.T01:CDS |
| TACGATAGCTATGGTGGAGG+TGG | 0.483595 | 2:-16384255 | MsG0280007504.01.T01:CDS |
| GGAGGTGGGCCGTGTTATGT+GGG | 0.492576 | 2:-16384240 | MsG0280007504.01.T01:CDS |
| CTCAGCGAAGAAAACGCAAC+AGG | 0.503972 | 2:-16384201 | MsG0280007504.01.T01:CDS |
| CACCATACTGATTAGGGTAT+GGG | 0.504883 | 2:+16384316 | None:intergenic |
| GTGGTCCACCATACTGATTA+GGG | 0.511313 | 2:+16384310 | None:intergenic |
| GCTACGAGGGTAGACCTGTT+GGG | 0.519466 | 2:-16384347 | MsG0280007504.01.T01:CDS |
| TGCTACGAGGGTAGACCTGT+TGG | 0.523238 | 2:-16384348 | MsG0280007504.01.T01:CDS |
| ACTGGAACCGCCATAGGTGG+TGG | 0.525042 | 2:+16384393 | None:intergenic |
| TGATTAGGGTATGGGCCGTA+TGG | 0.546802 | 2:+16384324 | None:intergenic |
| CGCTGAGATATTGATCGCAT+CGG | 0.559500 | 2:+16384217 | None:intergenic |
| CCAGTATACGATAGCTATGG+TGG | 0.563800 | 2:-16384261 | MsG0280007504.01.T01:CDS |
| ACGATAGCTATGGTGGAGGT+GGG | 0.588196 | 2:-16384254 | MsG0280007504.01.T01:CDS |
| TCGCATCGGCCCACATAACA+CGG | 0.600233 | 2:+16384231 | None:intergenic |
| ATCCCAACTGGAACCGCCAT+AGG | 0.607318 | 2:+16384387 | None:intergenic |
| ACAGGTCTACCCTCGTAGCA+TGG | 0.615096 | 2:+16384351 | None:intergenic |
| AGACCAGTATACGATAGCTA+TGG | 0.617281 | 2:-16384264 | MsG0280007504.01.T01:CDS |
| GGTGGACCACAATGTTATGA+CGG | 0.619668 | 2:-16384297 | MsG0280007504.01.T01:CDS |
| CCAACTGGAACCGCCATAGG+TGG | 0.630035 | 2:+16384390 | None:intergenic |
| ACAAATGCCACCACCTATGG+CGG | 0.640749 | 2:-16384400 | None:intergenic |
| GTATACGATAGCTATGGTGG+AGG | 0.658092 | 2:-16384258 | MsG0280007504.01.T01:CDS |
| CCATACCCTAATCAGTATGG+TGG | 0.668874 | 2:-16384315 | MsG0280007504.01.T01:CDS |
| TAGTATCCGTCATAACATTG+TGG | 0.672588 | 2:+16384291 | None:intergenic |
| TTATGTTCCACCATGCTACG+AGG | 0.686372 | 2:-16384361 | MsG0280007504.01.T01:CDS |
| TATGTTCCACCATGCTACGA+GGG | 0.710253 | 2:-16384360 | MsG0280007504.01.T01:CDS |
| GGTCTACCCTCGTAGCATGG+TGG | 0.713983 | 2:+16384354 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TAGTATCCGTCATAACATTG+TGG | + | Chr2:16384245-16384264 | None:intergenic | 35.0% | |
| AGACCAGTATACGATAGCTA+TGG | - | Chr2:16384269-16384288 | MsG0280007504.01.T01:CDS | 40.0% | |
| ! | CACCATACTGATTAGGGTAT+GGG | + | Chr2:16384220-16384239 | None:intergenic | 40.0% |
| CCACCATAGCTATCGTATAC+TGG | + | Chr2:16384275-16384294 | None:intergenic | 45.0% | |
| CCAGTATACGATAGCTATGG+TGG | - | Chr2:16384272-16384291 | MsG0280007504.01.T01:CDS | 45.0% | |
| CCATACCCTAATCAGTATGG+TGG | - | Chr2:16384218-16384237 | MsG0280007504.01.T01:CDS | 45.0% | |
| CGCTGAGATATTGATCGCAT+CGG | + | Chr2:16384319-16384338 | None:intergenic | 45.0% | |
| GGAACATAACACATCCCAAC+TGG | + | Chr2:16384161-16384180 | None:intergenic | 45.0% | |
| GGTGGACCACAATGTTATGA+CGG | - | Chr2:16384236-16384255 | MsG0280007504.01.T01:CDS | 45.0% | |
| GTATACGATAGCTATGGTGG+AGG | - | Chr2:16384275-16384294 | MsG0280007504.01.T01:CDS | 45.0% | |
| TATGTTCCACCATGCTACGA+GGG | - | Chr2:16384173-16384192 | MsG0280007504.01.T01:CDS | 45.0% | |
| TTATGTTCCACCATGCTACG+AGG | - | Chr2:16384172-16384191 | MsG0280007504.01.T01:CDS | 45.0% | |
| ! | CCACCATACTGATTAGGGTA+TGG | + | Chr2:16384221-16384240 | None:intergenic | 45.0% |
| ! | GTGGTCCACCATACTGATTA+GGG | + | Chr2:16384226-16384245 | None:intergenic | 45.0% |
| ! | TGTGGTCCACCATACTGATT+AGG | + | Chr2:16384227-16384246 | None:intergenic | 45.0% |
| CTCAGCGAAGAAAACGCAAC+AGG | - | Chr2:16384332-16384351 | MsG0280007504.01.T01:CDS | 50.0% | |
| GGCCCATACCCTAATCAGTA+TGG | - | Chr2:16384215-16384234 | MsG0280007504.01.T01:CDS | 50.0% | |
| TGATTAGGGTATGGGCCGTA+TGG | + | Chr2:16384212-16384231 | None:intergenic | 50.0% | |
| ! | ACGATAGCTATGGTGGAGGT+GGG | - | Chr2:16384279-16384298 | MsG0280007504.01.T01:CDS | 50.0% |
| ! | TACGATAGCTATGGTGGAGG+TGG | - | Chr2:16384278-16384297 | MsG0280007504.01.T01:CDS | 50.0% |
| ACAGGTCTACCCTCGTAGCA+TGG | + | Chr2:16384185-16384204 | None:intergenic | 55.0% | |
| ATCCCAACTGGAACCGCCAT+AGG | + | Chr2:16384149-16384168 | None:intergenic | 55.0% | |
| CACCTATGGCGGTTCCAGTT+GGG | - | Chr2:16384144-16384163 | MsG0280007504.01.T01:CDS | 55.0% | |
| GCTACGAGGGTAGACCTGTT+GGG | - | Chr2:16384186-16384205 | MsG0280007504.01.T01:CDS | 55.0% | |
| GGTAGACCTGTTGGGCCATA+CGG | - | Chr2:16384194-16384213 | MsG0280007504.01.T01:CDS | 55.0% | |
| TGCTACGAGGGTAGACCTGT+TGG | - | Chr2:16384185-16384204 | MsG0280007504.01.T01:CDS | 55.0% | |
| ! | TCGCATCGGCCCACATAACA+CGG | + | Chr2:16384305-16384324 | None:intergenic | 55.0% |
| ACTGGAACCGCCATAGGTGG+TGG | + | Chr2:16384143-16384162 | None:intergenic | 60.0% | |
| CCAACTGGAACCGCCATAGG+TGG | + | Chr2:16384146-16384165 | None:intergenic | 60.0% | |
| CCACCTATGGCGGTTCCAGT+TGG | - | Chr2:16384143-16384162 | MsG0280007504.01.T01:CDS | 60.0% | |
| GGAGGTGGGCCGTGTTATGT+GGG | - | Chr2:16384293-16384312 | MsG0280007504.01.T01:CDS | 60.0% | |
| GGTCTACCCTCGTAGCATGG+TGG | + | Chr2:16384182-16384201 | None:intergenic | 60.0% | |
| TATGGGCCGTATGGCCCAAC+AGG | + | Chr2:16384203-16384222 | None:intergenic | 60.0% | |
| TGGAGGTGGGCCGTGTTATG+TGG | - | Chr2:16384292-16384311 | MsG0280007504.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 16384137 | 16384418 | 16384137 | ID=MsG0280007504.01;Name=MsG0280007504.01 |
| Chr2 | mRNA | 16384137 | 16384418 | 16384137 | ID=MsG0280007504.01.T01;Parent=MsG0280007504.01;Name=MsG0280007504.01.T01;_AED=0.46;_eAED=0.56;_QI=0|-1|0|1|-1|1|1|0|93 |
| Chr2 | exon | 16384137 | 16384418 | 16384137 | ID=MsG0280007504.01.T01:exon:1234;Parent=MsG0280007504.01.T01 |
| Chr2 | CDS | 16384137 | 16384418 | 16384137 | ID=MsG0280007504.01.T01:cds;Parent=MsG0280007504.01.T01 |
| Gene Sequence |
| Protein sequence |
