AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009808.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009808.01.T01 MTR_2g072240 57.931 145 47 2 103 241 261 397 3.58e-50 170
MsG0280009808.01.T01 MTR_2g072240 51.190 84 41 0 14 97 6 89 1.72e-19 87.0
MsG0280009808.01.T01 MTR_2g071720 94.286 70 4 0 172 241 61 130 6.42e-44 146
MsG0280009808.01.T01 MTR_2g071700 89.247 93 10 0 1 93 1 93 1.23e-42 148
MsG0280009808.01.T01 MTR_2g071700 78.205 78 16 1 96 172 262 339 8.35e-33 122
MsG0280009808.01.T01 MTR_6g034190 42.021 188 58 2 105 241 273 460 1.49e-37 137
MsG0280009808.01.T01 MTR_6g034190 51.064 94 45 1 1 94 1 93 9.51e-19 85.1
MsG0280009808.01.T01 MTR_2g070780 66.316 95 31 1 1 95 1 94 3.76e-32 120
MsG0280009808.01.T01 MTR_2g070780 68.571 70 22 0 105 174 268 337 2.99e-25 102
MsG0280009808.01.T01 MTR_2g070660 58.065 93 9 1 1 93 1 63 3.30e-24 95.5
MsG0280009808.01.T01 MTR_2g070820 70.000 60 18 0 112 171 1 60 6.25e-22 88.2
MsG0280009808.01.T01 MTR_2g070810 64.583 48 16 1 1 48 49 95 2.03e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 43 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGAATGTGCTCAGGATTT+TGG 0.185156 2:+58491086 MsG0280009808.01.T01:intron
CTTACCCTGGTGGTTTGTTT+TGG 0.236904 2:+58492333 MsG0280009808.01.T01:CDS
GTTAAGTACTTAATATTAAA+TGG 0.248591 2:+58492446 MsG0280009808.01.T01:CDS
CCAAGCGATGGGAGTCATTA+TGG 0.279125 2:+58490191 MsG0280009808.01.T01:CDS
CTAAAGTCTGTTTGTATAAA+GGG 0.291958 2:+58492392 MsG0280009808.01.T01:CDS
GCACGAAGAACTTGAAGTTT+TGG 0.293746 2:-58491183 None:intergenic
AAGACTTCAACATTTGTCTT+TGG 0.296399 2:-58490240 None:intergenic
ATAATATTACCATTTGGTTT+TGG 0.316534 2:+58492480 MsG0280009808.01.T01:CDS
CCTAAAGTCTGTTTGTATAA+AGG 0.317402 2:+58492391 MsG0280009808.01.T01:CDS
ATCTTCATGACTACAAATAA+TGG 0.327696 2:-58491145 None:intergenic
CCTTTATACAAACAGACTTT+AGG 0.331850 2:-58492391 None:intergenic
TATTTGTAGTCATGAAGATT+TGG 0.359911 2:+58491149 MsG0280009808.01.T01:CDS
TTTGTCTTTGGTCAAAACTA+AGG 0.395796 2:-58490228 None:intergenic
CATTTATTTACTTCCATACA+TGG 0.408214 2:+58490144 MsG0280009808.01.T01:CDS
TCATGAAGATTTGGTCTTTG+AGG 0.413287 2:+58491158 MsG0280009808.01.T01:CDS
TTATGAATAATATTACCATT+TGG 0.432439 2:+58492474 MsG0280009808.01.T01:CDS
GTTCTCACAACTTCCATGTA+TGG 0.439142 2:-58490157 None:intergenic
GTTTGTATAAAGGGATATAA+AGG 0.451854 2:+58492401 MsG0280009808.01.T01:CDS
TCTTAAACTCTAGGTCAAGT+TGG 0.476404 2:+58492277 MsG0280009808.01.T01:intron
GATAGAACCTAAAAGTTCAT+CGG 0.492455 2:-58490122 None:intergenic
ATAGAACCTAAAAGTTCATC+GGG 0.493156 2:-58490121 None:intergenic
CTTTGGTCAAAACTAAGGTC+AGG 0.496709 2:-58490223 None:intergenic
CAAAACAAACCACCAGGGTA+AGG 0.497256 2:-58492332 None:intergenic
GAACATCATCCAAAACCAAA+TGG 0.515540 2:-58492489 None:intergenic
CAAGTGTGCTTTCCAAGCGA+TGG 0.528071 2:+58490179 MsG0280009808.01.T01:CDS
CCATAATGACTCCCATCGCT+TGG 0.530097 2:-58490191 None:intergenic
GGCTCAAAAGGGACCCCTGT+AGG 0.543884 2:+58492354 MsG0280009808.01.T01:CDS
GCTACGGCTAACACACCTAC+AGG 0.546526 2:-58492369 None:intergenic
TACAAACAGACTTTAGGCTA+CGG 0.550195 2:-58492385 None:intergenic
GATAGTCTTCCTTACCCTGG+TGG 0.551228 2:+58492323 MsG0280009808.01.T01:CDS
AAGTGTGCTTTCCAAGCGAT+GGG 0.578750 2:+58490180 MsG0280009808.01.T01:CDS
TTGAGCCAAAACAAACCACC+AGG 0.586250 2:-58492338 None:intergenic
TGTATAAAGGGATATAAAGG+TGG 0.601016 2:+58492404 MsG0280009808.01.T01:CDS
ATTGTAAGACGGTCATCAAG+TGG 0.611036 2:-58490289 None:intergenic
TACAATGGCTATGCAACGCA+AGG 0.612851 2:+58490306 MsG0280009808.01.T01:CDS
CTACGGCTAACACACCTACA+GGG 0.616738 2:-58492368 None:intergenic
GTTGCATAGCCATTGTAAGA+CGG 0.627198 2:-58490300 None:intergenic
GAACACGAAGGAATGAGTGA+AGG 0.644225 2:+58490040 None:intergenic
ACTTGATGACCGTCTTACAA+TGG 0.648825 2:+58490291 MsG0280009808.01.T01:CDS
AATGATAGTCTTCCTTACCC+TGG 0.661903 2:+58492320 MsG0280009808.01.T01:CDS
AAGTACTTAATATTAAATGG+CGG 0.681402 2:+58492449 MsG0280009808.01.T01:CDS
TACGGCTAACACACCTACAG+GGG 0.715804 2:-58492367 None:intergenic
TGAGCCAAAACAAACCACCA+GGG 0.739963 2:-58492337 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATAATTAGATTATTCAAA+TGG + Chr2:58490404-58490423 MsG0280009808.01.T01:intron 15.0%
!! GTTAAGTACTTAATATTAAA+TGG + Chr2:58492446-58492465 MsG0280009808.01.T01:CDS 15.0%
!! TTATGAATAATATTACCATT+TGG + Chr2:58492474-58492493 MsG0280009808.01.T01:CDS 15.0%
!!! AGAGATATTATAGAAATTTT+CGG + Chr2:58491270-58491289 MsG0280009808.01.T01:CDS 15.0%
!!! ATTTTAATATATTTCAGACT+TGG - Chr2:58491061-58491080 None:intergenic 15.0%
!!! CAATTATTCAAGTTTTAAAA+TGG + Chr2:58492105-58492124 MsG0280009808.01.T01:intron 15.0%
!! AAATAAATAACAGGTATGTT+TGG + Chr2:58492031-58492050 MsG0280009808.01.T01:intron 20.0%
!! AAGTACTTAATATTAAATGG+CGG + Chr2:58492449-58492468 MsG0280009808.01.T01:CDS 20.0%
!! AATAAATAACAGGTATGTTT+GGG + Chr2:58492032-58492051 MsG0280009808.01.T01:intron 20.0%
!! AATATTTGATGTAATCATCA+TGG - Chr2:58490621-58490640 None:intergenic 20.0%
!! ATATCATAGCTTATTATATG+TGG + Chr2:58491606-58491625 MsG0280009808.01.T01:intron 20.0%
!! CATTCATTTCATTTAGAAAA+TGG - Chr2:58490493-58490512 None:intergenic 20.0%
!! TATATGTACAACTTAACATA+TGG + Chr2:58491431-58491450 MsG0280009808.01.T01:intron 20.0%
!! TCAAATATTGACAATCATAT+TGG + Chr2:58490632-58490651 MsG0280009808.01.T01:intron 20.0%
!! TGAATCTTCAAATAAATAAC+AGG + Chr2:58492022-58492041 MsG0280009808.01.T01:intron 20.0%
!! TGAGATATGATATATATTGA+CGG + Chr2:58490534-58490553 MsG0280009808.01.T01:intron 20.0%
!!! AATAAGCTATGATATTTTCT+AGG - Chr2:58491601-58491620 None:intergenic 20.0%
!!! ATAATATTACCATTTGGTTT+TGG + Chr2:58492480-58492499 MsG0280009808.01.T01:CDS 20.0%
!!! CAAAAATTTAGAACATTAGA+TGG - Chr2:58491396-58491415 None:intergenic 20.0%
!!! GGAGAAATTTTATTTATTGA+TGG + Chr2:58491228-58491247 MsG0280009808.01.T01:CDS 20.0%
!!! TACAATGATTTTCAAATTCT+TGG + Chr2:58491207-58491226 MsG0280009808.01.T01:CDS 20.0%
!!! TTTTTAGATGACATTTTCTA+AGG - Chr2:58491757-58491776 None:intergenic 20.0%
! AATCTTGATTATCTTAACGA+AGG + Chr2:58490769-58490788 MsG0280009808.01.T01:intron 25.0%
! AGAAAGATAGTTACAAAACA+AGG - Chr2:58491864-58491883 None:intergenic 25.0%
! ATCTTCATGACTACAAATAA+TGG - Chr2:58491148-58491167 None:intergenic 25.0%
! ATTTGAAGATTCATTAGTTG+TGG - Chr2:58492015-58492034 None:intergenic 25.0%
! CATTTATTTACTTCCATACA+TGG + Chr2:58490144-58490163 MsG0280009808.01.T01:CDS 25.0%
! CATTTCATTTAGAAAATGGA+AGG - Chr2:58490489-58490508 None:intergenic 25.0%
! CTAAAGTCTGTTTGTATAAA+GGG + Chr2:58492392-58492411 MsG0280009808.01.T01:CDS 25.0%
! GAAAGATAGTTACAAAACAA+GGG - Chr2:58491863-58491882 None:intergenic 25.0%
! GTTTGTATAAAGGGATATAA+AGG + Chr2:58492401-58492420 MsG0280009808.01.T01:CDS 25.0%
! TAAAGATAGTTGCAAACATA+TGG - Chr2:58492068-58492087 None:intergenic 25.0%
! TAAGGAAAATACTGGAAAAA+GGG + Chr2:58490721-58490740 MsG0280009808.01.T01:intron 25.0%
! TATCTTTCTTGATTGTCTTA+GGG + Chr2:58491875-58491894 MsG0280009808.01.T01:intron 25.0%
! TATTTGTAGTCATGAAGATT+TGG + Chr2:58491149-58491168 MsG0280009808.01.T01:CDS 25.0%
! TTAAGGAAAATACTGGAAAA+AGG + Chr2:58490720-58490739 MsG0280009808.01.T01:intron 25.0%
!! ATTGATTTATCGTTACATCA+TGG - Chr2:58492213-58492232 None:intergenic 25.0%
!! GATATTATAGAAATTTTCGG+TGG + Chr2:58491273-58491292 MsG0280009808.01.T01:CDS 25.0%
!! TTAAGTTGTACATATATCCA+AGG - Chr2:58491427-58491446 None:intergenic 25.0%
AAATTGGAGAAAACCTCAAA+AGG - Chr2:58490841-58490860 None:intergenic 30.0%
AACCTCAAAAGGTAAATCAA+TGG - Chr2:58490830-58490849 None:intergenic 30.0%
AAGACTTCAACATTTGTCTT+TGG - Chr2:58490243-58490262 None:intergenic 30.0%
AAGGAAAATACTGGAAAAAG+GGG + Chr2:58490722-58490741 MsG0280009808.01.T01:intron 30.0%
AAGGAATCATACTTGCATTA+AGG - Chr2:58491538-58491557 None:intergenic 30.0%
AGAACAGAAAAAAGTGAAAG+TGG + Chr2:58490063-58490082 MsG0280009808.01.T01:CDS 30.0%
ATAGAACCTAAAAGTTCATC+GGG - Chr2:58490124-58490143 None:intergenic 30.0%
ATATTTGTAGTAGGCATACT+TGG - Chr2:58491700-58491719 None:intergenic 30.0%
ATCAAATACTCCTCATTTGT+AGG - Chr2:58490582-58490601 None:intergenic 30.0%
ATTGTAATATGAATGTGCTC+AGG + Chr2:58491079-58491098 MsG0280009808.01.T01:intron 30.0%
CACAAAAAATCACGCTTATT+GGG + Chr2:58491567-58491586 MsG0280009808.01.T01:intron 30.0%
CCTAAAGTCTGTTTGTATAA+AGG + Chr2:58492391-58492410 MsG0280009808.01.T01:CDS 30.0%
CCTTTATACAAACAGACTTT+AGG - Chr2:58492394-58492413 None:intergenic 30.0%
CTATCTTTCTTGATTGTCTT+AGG + Chr2:58491874-58491893 MsG0280009808.01.T01:intron 30.0%
CTCTAAGCAATATTTGTAGT+AGG - Chr2:58491709-58491728 None:intergenic 30.0%
GATAGAACCTAAAAGTTCAT+CGG - Chr2:58490125-58490144 None:intergenic 30.0%
TAACGAAGGAATATTAGACT+TGG + Chr2:58490783-58490802 MsG0280009808.01.T01:intron 30.0%
TACTGTTCAATTCAAAGTTG+AGG - Chr2:58491952-58491971 None:intergenic 30.0%
TCAACTCAAGAACCTTAAAT+TGG - Chr2:58490857-58490876 None:intergenic 30.0%
TCACAAAAAATCACGCTTAT+TGG + Chr2:58491566-58491585 MsG0280009808.01.T01:intron 30.0%
TCTAAGGAGCAAAATCAAAT+TGG - Chr2:58491741-58491760 None:intergenic 30.0%
TGTATAAAGGGATATAAAGG+TGG + Chr2:58492404-58492423 MsG0280009808.01.T01:CDS 30.0%
TTAAGAATCACAATTCTCGA+CGG - Chr2:58491015-58491034 None:intergenic 30.0%
TTATTCTTACATGTGTCATG+AGG + Chr2:58491822-58491841 MsG0280009808.01.T01:intron 30.0%
TTTGTCTTTGGTCAAAACTA+AGG - Chr2:58490231-58490250 None:intergenic 30.0%
! AAATTTTTGTTGCATCTCCT+TGG + Chr2:58491407-58491426 MsG0280009808.01.T01:intron 30.0%
! CATTTTTCCTCTTAAACTCT+AGG + Chr2:58492268-58492287 MsG0280009808.01.T01:intron 30.0%
! GATGCTGAAAATTGTTGTTA+TGG + Chr2:58491650-58491669 MsG0280009808.01.T01:intron 30.0%
! TTGAGGTTTTCTCCAATTTA+AGG + Chr2:58490842-58490861 MsG0280009808.01.T01:intron 30.0%
!!! AAGTGTTTTTAAAGTCTGCT+GGG - Chr2:58490916-58490935 None:intergenic 30.0%
!!! ATAAGCGTGATTTTTTGTGA+TGG - Chr2:58491566-58491585 None:intergenic 30.0%
!!! ATTTTTTGTGATGGCTCAAA+AGG - Chr2:58491557-58491576 None:intergenic 30.0%
!!! GTTTTAAAATGGCGTGTAAT+AGG + Chr2:58492116-58492135 MsG0280009808.01.T01:intron 30.0%
!!! TAAGTGTTTTTAAAGTCTGC+TGG - Chr2:58490917-58490936 None:intergenic 30.0%
AACTTGACCTAGAGTTTAAG+AGG - Chr2:58492278-58492297 None:intergenic 35.0%
AGATGCAAAAAAGTGAGTCA+AGG + Chr2:58491491-58491510 MsG0280009808.01.T01:intron 35.0%
GAAAAAAGTGAAAGTGGTAG+AGG + Chr2:58490069-58490088 MsG0280009808.01.T01:CDS 35.0%
GAACATCATCCAAAACCAAA+TGG - Chr2:58492492-58492511 None:intergenic 35.0%
TACAAACAGACTTTAGGCTA+CGG - Chr2:58492388-58492407 None:intergenic 35.0%
TACTTGGTTACTGTTCAGTA+AGG - Chr2:58491684-58491703 None:intergenic 35.0%
TCTTAAACTCTAGGTCAAGT+TGG + Chr2:58492277-58492296 MsG0280009808.01.T01:intron 35.0%
! ACGAAGAACTTGAAGTTTTG+GGG - Chr2:58491184-58491203 None:intergenic 35.0%
! AGAAATTTTCGGTGGTATTC+TGG + Chr2:58491281-58491300 MsG0280009808.01.T01:CDS 35.0%
! CACGAAGAACTTGAAGTTTT+GGG - Chr2:58491185-58491204 None:intergenic 35.0%
! CATTTTCATGAAGAGTCAAC+AGG + Chr2:58490431-58490450 MsG0280009808.01.T01:intron 35.0%
! TATGAATGTGCTCAGGATTT+TGG + Chr2:58491086-58491105 MsG0280009808.01.T01:intron 35.0%
! TCATGAAGATTTGGTCTTTG+AGG + Chr2:58491158-58491177 MsG0280009808.01.T01:CDS 35.0%
!!! GACCATTGATTTACCTTTTG+AGG + Chr2:58490825-58490844 MsG0280009808.01.T01:intron 35.0%
!!! TGGTTTGTTTTGGCTCAAAA+GGG + Chr2:58492343-58492362 MsG0280009808.01.T01:CDS 35.0%
!!! TGGTTTTGGATGATGTTCAT+GGG + Chr2:58492494-58492513 MsG0280009808.01.T01:CDS 35.0%
!!! TTGGTTTTGGATGATGTTCA+TGG + Chr2:58492493-58492512 MsG0280009808.01.T01:CDS 35.0%
AATCACAATTCTCGACGGTA+AGG - Chr2:58491010-58491029 None:intergenic 40.0%
AATGATAGTCTTCCTTACCC+TGG + Chr2:58492320-58492339 MsG0280009808.01.T01:CDS 40.0%
ACTGGAAAAAGGGGTGATTA+AGG + Chr2:58490731-58490750 MsG0280009808.01.T01:intron 40.0%
ATGGCGTGTAATAGGAATTG+TGG + Chr2:58492124-58492143 MsG0280009808.01.T01:intron 40.0%
ATTGTAAGACGGTCATCAAG+TGG - Chr2:58490292-58490311 None:intergenic 40.0%
CAGCATCGCATCAAATTACT+CGG - Chr2:58491637-58491656 None:intergenic 40.0%
CTTTGGTCAAAACTAAGGTC+AGG - Chr2:58490226-58490245 None:intergenic 40.0%
GAGTGCAAAAGAAAGAGCTA+TGG - Chr2:58491984-58492003 None:intergenic 40.0%
GTTCTCACAACTTCCATGTA+TGG - Chr2:58490160-58490179 None:intergenic 40.0%
GTTGCATAGCCATTGTAAGA+CGG - Chr2:58490303-58490322 None:intergenic 40.0%
TCATGAAGAGTCAACAGGAA+GGG + Chr2:58490436-58490455 MsG0280009808.01.T01:intron 40.0%
TCGATGGTACAACTCTTCAA+GGG - Chr2:58490659-58490678 None:intergenic 40.0%
TGGGTGGTTAAGGAAAATAC+TGG + Chr2:58490713-58490732 MsG0280009808.01.T01:intron 40.0%
TTAAAGTCTGCTGGGAATCA+GGG - Chr2:58490908-58490927 None:intergenic 40.0%
TTCATGAAGAGTCAACAGGA+AGG + Chr2:58490435-58490454 MsG0280009808.01.T01:intron 40.0%
TTGGTTACTGTTCAGTAAGG+TGG - Chr2:58491681-58491700 None:intergenic 40.0%
! ACTTGATGACCGTCTTACAA+TGG + Chr2:58490291-58490310 MsG0280009808.01.T01:CDS 40.0%
! AGTCTTCCCGATGAACTTTT+AGG + Chr2:58490115-58490134 MsG0280009808.01.T01:CDS 40.0%
! GCACGAAGAACTTGAAGTTT+TGG - Chr2:58491186-58491205 None:intergenic 40.0%
! TTTAAAGTCTGCTGGGAATC+AGG - Chr2:58490909-58490928 None:intergenic 40.0%
!!! GTGGTTTGTTTTGGCTCAAA+AGG + Chr2:58492342-58492361 MsG0280009808.01.T01:CDS 40.0%
AAGTGTGCTTTCCAAGCGAT+GGG + Chr2:58490180-58490199 MsG0280009808.01.T01:CDS 45.0%
ACAGGTAGCTCCTACAAATG+AGG + Chr2:58490569-58490588 MsG0280009808.01.T01:intron 45.0%
CAAAACAAACCACCAGGGTA+AGG - Chr2:58492335-58492354 None:intergenic 45.0%
GTCGATGGTACAACTCTTCA+AGG - Chr2:58490660-58490679 None:intergenic 45.0%
TAAAGTCTGCTGGGAATCAG+GGG - Chr2:58490907-58490926 None:intergenic 45.0%
TACAATGGCTATGCAACGCA+AGG + Chr2:58490306-58490325 MsG0280009808.01.T01:CDS 45.0%
TGACGGAATTCATGCATGAC+AGG + Chr2:58490551-58490570 MsG0280009808.01.T01:intron 45.0%
TGAGCCAAAACAAACCACCA+GGG - Chr2:58492340-58492359 None:intergenic 45.0%
TGATTGTCTTAGGGTCATCG+AGG + Chr2:58491884-58491903 MsG0280009808.01.T01:intron 45.0%
TGTGCAAGTGCGGATATTGT+GGG + Chr2:58490694-58490713 MsG0280009808.01.T01:intron 45.0%
TTGAGCCAAAACAAACCACC+AGG - Chr2:58492341-58492360 None:intergenic 45.0%
TTGTGCAAGTGCGGATATTG+TGG + Chr2:58490693-58490712 MsG0280009808.01.T01:intron 45.0%
!!! CTTACCCTGGTGGTTTGTTT+TGG + Chr2:58492333-58492352 MsG0280009808.01.T01:CDS 45.0%
CAAGTGTGCTTTCCAAGCGA+TGG + Chr2:58490179-58490198 MsG0280009808.01.T01:CDS 50.0%
CCAAGCGATGGGAGTCATTA+TGG + Chr2:58490191-58490210 MsG0280009808.01.T01:CDS 50.0%
CCATAATGACTCCCATCGCT+TGG - Chr2:58490194-58490213 None:intergenic 50.0%
CTACGGCTAACACACCTACA+GGG - Chr2:58492371-58492390 None:intergenic 50.0%
GATAGTCTTCCTTACCCTGG+TGG + Chr2:58492323-58492342 MsG0280009808.01.T01:CDS 50.0%
GCGGATATTGTGGGTGGTTA+AGG + Chr2:58490703-58490722 MsG0280009808.01.T01:intron 50.0%
TACGGCTAACACACCTACAG+GGG - Chr2:58492370-58492389 None:intergenic 50.0%
TCTTAGGGTCATCGAGGTTC+AGG + Chr2:58491890-58491909 MsG0280009808.01.T01:intron 50.0%
!! AACTCTCAGGCAAGTGTCGA+TGG - Chr2:58490675-58490694 None:intergenic 50.0%
GCAAGTGCGGATATTGTGGG+TGG + Chr2:58490697-58490716 MsG0280009808.01.T01:intron 55.0%
GCCTGAGAGTTGTGCAAGTG+CGG + Chr2:58490684-58490703 MsG0280009808.01.T01:intron 55.0%
GCTACGGCTAACACACCTAC+AGG - Chr2:58492372-58492391 None:intergenic 55.0%
GGTCATCGAGGTTCAGGCAT+GGG + Chr2:58491896-58491915 MsG0280009808.01.T01:intron 55.0%
TCCGCACTTGCACAACTCTC+AGG - Chr2:58490688-58490707 None:intergenic 55.0%
AGTCTGCTGGGAATCAGGGG+AGG - Chr2:58490904-58490923 None:intergenic 60.0%
GGCTCAAAAGGGACCCCTGT+AGG + Chr2:58492354-58492373 MsG0280009808.01.T01:CDS 60.0%
GGGTCATCGAGGTTCAGGCA+TGG + Chr2:58491895-58491914 MsG0280009808.01.T01:intron 60.0%
GTCTGCTGGGAATCAGGGGA+GGG - Chr2:58490903-58490922 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 58490052 58492520 58490052 ID=MsG0280009808.01;Name=MsG0280009808.01
Chr2 mRNA 58490052 58492520 58490052 ID=MsG0280009808.01.T01;Parent=MsG0280009808.01;Name=MsG0280009808.01.T01;_AED=0.27;_eAED=0.28;_QI=0|0|0|1|0.5|0.66|3|0|247
Chr2 exon 58490052 58490362 58490052 ID=MsG0280009808.01.T01:exon:22511;Parent=MsG0280009808.01.T01
Chr2 exon 58491101 58491302 58491101 ID=MsG0280009808.01.T01:exon:22512;Parent=MsG0280009808.01.T01
Chr2 exon 58492290 58492520 58492290 ID=MsG0280009808.01.T01:exon:22513;Parent=MsG0280009808.01.T01
Chr2 CDS 58490052 58490362 58490052 ID=MsG0280009808.01.T01:cds;Parent=MsG0280009808.01.T01
Chr2 CDS 58491101 58491302 58491101 ID=MsG0280009808.01.T01:cds;Parent=MsG0280009808.01.T01
Chr2 CDS 58492290 58492520 58492290 ID=MsG0280009808.01.T01:cds;Parent=MsG0280009808.01.T01
Gene Sequence

>MsG0280009808.01.T01

ATGAGTGAAGGAGAACAGAAAAAAGTGAAAGTGGTAGAGGAGCAAGAAGCAGATTTGATCAACAGTCTTCCCGATGAACTTTTAGGTTCTATCATTTATTTACTTCCATACATGGAAGTTGTGAGAACAAGTGTGCTTTCCAAGCGATGGGAGTCATTATGGAAGAACAGTCCTGACCTTAGTTTTGACCAAAGACAAATGTTGAAGTCTTTGATTGAAGAGTACATTCAAAATTCTCCACTTGATGACCGTCTTACAATGGCTATGCAACGCAAGGTAATTTTATTGAAATCATGTAAAATAAGTTATGTGATTTTGGTTTCTGCATTTAATGTTGAAGTCATAGAGATTGACTCCATTATTTGTAGTCATGAAGATTTGGTCTTTGAGGCCCCAAAACTTCAAGTTCTTCGTGCTTACAATGATTTTCAAATTCTTGGAGAAATTTTATTTATTGATGGAAGAAAGCTTTTGACAGCAAGAGATATTATAGAAATTTTCGGTGGTATTCTGGTCAAGTTGGATTATTATGATCAGAATGACAATGATAGTCTTCCTTACCCTGGTGGTTTGTTTTGGCTCAAAAGGGACCCCTGTAGGTGTGTTAGCCGTAGCCTAAAGTCTGTTTGTATAAAGGGATATAAAGGTGGAGAGTTTGAATTTGAGTTCGTTAAGTACTTAATATTAAATGGCGGAGTTATGAATAATATTACCATTTGGTTTTGGATGATGTTCATGGGATGA
Protein sequence

>MsG0280009808.01.T01

MSEGEQKKVKVVEEQEADLINSLPDELLGSIIYLLPYMEVVRTSVLSKRWESLWKNSPDLSFDQRQMLKSLIEEYIQNSPLDDRLTMAMQRKVILLKSCKISYVILVSAFNVEVIEIDSIICSHEDLVFEAPKLQVLRAYNDFQILGEILFIDGRKLLTARDIIEIFGGILVKLDYYDQNDNDSLPYPGGLFWLKRDPCRCVSRSLKSVCIKGYKGGEFEFEFVKYLILNGGVMNNITIWFWMMFMG*