Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016794.01.T01 | AES72804.1 | 66.044 | 321 | 56 | 7 | 8 | 301 | 1 | 295 | 4.05E-125 | 369 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016794.01.T01 | Q1PFK0 | 36.916 | 214 | 124 | 5 | 10 | 215 | 52 | 262 | 2.11E-22 | 99 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016794.01.T01 | MTR_3g095600 | 66.044 | 321 | 56 | 7 | 8 | 301 | 1 | 295 | 4.90e-129 | 369 |
MsG0380016794.01.T01 | MTR_5g073420 | 42.408 | 382 | 141 | 10 | 1 | 306 | 1 | 379 | 2.01e-76 | 238 |
MsG0380016794.01.T01 | MTR_3g095640 | 69.540 | 174 | 30 | 5 | 2 | 159 | 9 | 175 | 1.57e-69 | 214 |
MsG0380016794.01.T01 | MTR_5g058100 | 45.631 | 309 | 134 | 12 | 4 | 299 | 1 | 288 | 4.21e-68 | 217 |
MsG0380016794.01.T01 | MTR_5g058100 | 61.446 | 83 | 29 | 2 | 225 | 304 | 299 | 381 | 7.34e-23 | 97.8 |
MsG0380016794.01.T01 | MTR_5g058000 | 51.429 | 245 | 96 | 7 | 4 | 237 | 1 | 233 | 1.96e-66 | 213 |
MsG0380016794.01.T01 | MTR_5g058000 | 54.118 | 85 | 36 | 2 | 223 | 304 | 288 | 372 | 1.98e-17 | 82.0 |
MsG0380016794.01.T01 | MTR_5g061680 | 43.144 | 299 | 110 | 7 | 1 | 244 | 1 | 294 | 2.60e-62 | 200 |
MsG0380016794.01.T01 | MTR_1089s0010 | 53.982 | 226 | 85 | 5 | 4 | 219 | 1 | 217 | 5.20e-62 | 201 |
MsG0380016794.01.T01 | MTR_1089s0010 | 37.427 | 171 | 74 | 5 | 139 | 304 | 234 | 376 | 1.38e-21 | 94.0 |
MsG0380016794.01.T01 | MTR_1g066830 | 51.406 | 249 | 94 | 7 | 4 | 240 | 1 | 234 | 2.80e-60 | 197 |
MsG0380016794.01.T01 | MTR_6g044572 | 37.629 | 388 | 146 | 13 | 10 | 304 | 1 | 385 | 5.24e-60 | 196 |
MsG0380016794.01.T01 | MTR_6g044560 | 37.659 | 393 | 149 | 13 | 5 | 304 | 172 | 561 | 1.76e-59 | 199 |
MsG0380016794.01.T01 | MTR_1g085120 | 50.446 | 224 | 86 | 7 | 11 | 218 | 179 | 393 | 3.43e-58 | 194 |
MsG0380016794.01.T01 | MTR_1g085120 | 50.446 | 224 | 86 | 7 | 11 | 218 | 92 | 306 | 5.47e-58 | 193 |
MsG0380016794.01.T01 | MTR_1g085120 | 48.421 | 95 | 47 | 1 | 212 | 304 | 374 | 468 | 1.96e-20 | 91.7 |
MsG0380016794.01.T01 | MTR_1g085120 | 50.446 | 224 | 86 | 7 | 11 | 218 | 167 | 381 | 1.38e-57 | 194 |
MsG0380016794.01.T01 | MTR_1g085120 | 50.575 | 87 | 41 | 1 | 220 | 304 | 457 | 543 | 2.02e-20 | 91.7 |
MsG0380016794.01.T01 | MTR_6g040270 | 50.000 | 240 | 101 | 7 | 4 | 230 | 1 | 234 | 8.99e-55 | 182 |
MsG0380016794.01.T01 | MTR_6g040270 | 52.809 | 89 | 37 | 2 | 223 | 306 | 292 | 380 | 1.74e-18 | 85.1 |
MsG0380016794.01.T01 | MTR_7g055943 | 35.459 | 392 | 146 | 15 | 9 | 304 | 38 | 418 | 1.66e-54 | 183 |
MsG0380016794.01.T01 | MTR_6g022500 | 48.402 | 219 | 92 | 6 | 10 | 216 | 100 | 309 | 5.29e-54 | 183 |
MsG0380016794.01.T01 | MTR_6g022500 | 47.368 | 95 | 48 | 1 | 212 | 304 | 379 | 473 | 3.41e-19 | 87.8 |
MsG0380016794.01.T01 | MTR_6g011460 | 49.537 | 216 | 97 | 5 | 10 | 218 | 45 | 255 | 6.35e-54 | 181 |
MsG0380016794.01.T01 | MTR_4g039440 | 47.085 | 223 | 103 | 7 | 5 | 218 | 28 | 244 | 3.77e-51 | 174 |
MsG0380016794.01.T01 | MTR_4g039440 | 47.959 | 98 | 46 | 2 | 212 | 304 | 312 | 409 | 2.50e-17 | 82.0 |
MsG0380016794.01.T01 | MTR_6g022360 | 44.762 | 210 | 102 | 5 | 10 | 216 | 42 | 240 | 2.03e-44 | 156 |
MsG0380016794.01.T01 | MTR_6g022360 | 41.860 | 86 | 48 | 1 | 223 | 306 | 322 | 407 | 1.91e-13 | 70.5 |
MsG0380016794.01.T01 | MTR_5g058350 | 46.597 | 191 | 71 | 5 | 4 | 191 | 1 | 163 | 2.99e-43 | 147 |
MsG0380016794.01.T01 | MTR_5g039490 | 33.884 | 363 | 172 | 8 | 6 | 304 | 15 | 373 | 4.53e-41 | 147 |
MsG0380016794.01.T01 | MTR_7g026500 | 44.231 | 208 | 99 | 6 | 2 | 196 | 5 | 208 | 8.26e-41 | 146 |
MsG0380016794.01.T01 | MTR_7g026500 | 51.765 | 85 | 37 | 2 | 224 | 306 | 312 | 394 | 3.56e-16 | 78.6 |
MsG0380016794.01.T01 | MTR_5g031970 | 33.240 | 358 | 167 | 12 | 7 | 306 | 12 | 355 | 7.30e-38 | 137 |
MsG0380016794.01.T01 | MTR_1g108820 | 41.036 | 251 | 120 | 10 | 4 | 240 | 1 | 237 | 1.67e-37 | 137 |
MsG0380016794.01.T01 | MTR_1g108820 | 53.521 | 71 | 29 | 3 | 237 | 304 | 314 | 383 | 9.35e-12 | 65.5 |
MsG0380016794.01.T01 | MTR_1g108820 | 41.036 | 251 | 120 | 10 | 4 | 240 | 1 | 237 | 2.49e-37 | 136 |
MsG0380016794.01.T01 | MTR_5g045510 | 41.364 | 220 | 111 | 7 | 8 | 219 | 9 | 218 | 2.40e-35 | 131 |
MsG0380016794.01.T01 | MTR_5g065100 | 32.659 | 346 | 160 | 12 | 16 | 302 | 13 | 344 | 5.90e-35 | 131 |
MsG0380016794.01.T01 | MTR_3g095630 | 52.941 | 136 | 38 | 2 | 164 | 298 | 66 | 176 | 5.49e-34 | 123 |
MsG0380016794.01.T01 | MTR_7g032380 | 30.220 | 364 | 183 | 15 | 1 | 304 | 1 | 353 | 7.16e-34 | 127 |
MsG0380016794.01.T01 | MTR_0009s0080 | 38.095 | 231 | 126 | 5 | 13 | 236 | 20 | 240 | 1.08e-33 | 128 |
MsG0380016794.01.T01 | MTR_5g045170 | 42.654 | 211 | 105 | 7 | 10 | 211 | 13 | 216 | 1.38e-32 | 124 |
MsG0380016794.01.T01 | MTR_5g045170 | 36.800 | 125 | 74 | 4 | 187 | 306 | 266 | 390 | 5.42e-12 | 66.2 |
MsG0380016794.01.T01 | MTR_0571s0010 | 67.901 | 81 | 21 | 1 | 11 | 86 | 32 | 112 | 1.40e-31 | 114 |
MsG0380016794.01.T01 | MTR_8g085430 | 33.016 | 315 | 176 | 15 | 9 | 295 | 9 | 316 | 2.03e-30 | 117 |
MsG0380016794.01.T01 | MTR_1g108800 | 31.234 | 381 | 140 | 15 | 4 | 304 | 1 | 339 | 1.13e-29 | 115 |
MsG0380016794.01.T01 | MTR_6g045333 | 38.813 | 219 | 121 | 5 | 10 | 219 | 60 | 274 | 1.95e-29 | 116 |
MsG0380016794.01.T01 | MTR_6g045333 | 35.644 | 101 | 61 | 2 | 206 | 304 | 345 | 443 | 1.43e-11 | 65.1 |
MsG0380016794.01.T01 | MTR_3g467400 | 29.539 | 369 | 184 | 13 | 10 | 306 | 2 | 366 | 3.67e-29 | 114 |
MsG0380016794.01.T01 | MTR_7g114710 | 30.663 | 362 | 178 | 13 | 9 | 306 | 11 | 363 | 4.36e-29 | 114 |
MsG0380016794.01.T01 | MTR_3g040700 | 36.101 | 277 | 149 | 11 | 10 | 273 | 42 | 303 | 1.10e-28 | 114 |
MsG0380016794.01.T01 | MTR_6g022390 | 47.887 | 142 | 56 | 4 | 8 | 136 | 2 | 138 | 1.29e-28 | 107 |
MsG0380016794.01.T01 | MTR_5g073340 | 39.500 | 200 | 93 | 7 | 4 | 202 | 1 | 173 | 4.50e-26 | 105 |
MsG0380016794.01.T01 | MTR_3g071850 | 38.947 | 190 | 103 | 5 | 10 | 190 | 23 | 208 | 5.24e-26 | 108 |
MsG0380016794.01.T01 | MTR_3g071850 | 38.776 | 98 | 55 | 2 | 211 | 303 | 308 | 405 | 9.95e-14 | 72.0 |
MsG0380016794.01.T01 | MTR_1g041245 | 35.160 | 219 | 125 | 8 | 1 | 210 | 1 | 211 | 8.23e-26 | 105 |
MsG0380016794.01.T01 | MTR_3g023630 | 41.053 | 190 | 97 | 7 | 10 | 191 | 7 | 189 | 1.09e-25 | 105 |
MsG0380016794.01.T01 | MTR_5g007410 | 36.364 | 220 | 116 | 7 | 13 | 218 | 28 | 237 | 4.09e-25 | 104 |
MsG0380016794.01.T01 | MTR_5g007410 | 31.724 | 145 | 72 | 5 | 157 | 299 | 281 | 400 | 2.32e-11 | 64.3 |
MsG0380016794.01.T01 | MTR_7g098510 | 37.383 | 214 | 124 | 6 | 3 | 210 | 10 | 219 | 5.38e-25 | 103 |
MsG0380016794.01.T01 | MTR_7g007080 | 37.000 | 200 | 110 | 5 | 8 | 196 | 1 | 195 | 6.62e-25 | 103 |
MsG0380016794.01.T01 | MTR_2g036470 | 41.500 | 200 | 89 | 10 | 9 | 192 | 12 | 199 | 1.21e-24 | 102 |
MsG0380016794.01.T01 | MTR_2g036470 | 33.094 | 139 | 69 | 3 | 170 | 306 | 279 | 395 | 5.61e-11 | 63.2 |
MsG0380016794.01.T01 | MTR_5g076150 | 55.357 | 112 | 36 | 4 | 115 | 218 | 11 | 116 | 1.93e-24 | 99.4 |
MsG0380016794.01.T01 | MTR_7g098480 | 38.208 | 212 | 124 | 5 | 3 | 210 | 10 | 218 | 3.01e-24 | 102 |
MsG0380016794.01.T01 | MTR_6g033095 | 38.608 | 158 | 78 | 2 | 141 | 279 | 32 | 189 | 3.90e-24 | 97.4 |
MsG0380016794.01.T01 | MTR_3g082890 | 37.113 | 194 | 100 | 7 | 11 | 193 | 97 | 279 | 8.71e-24 | 101 |
MsG0380016794.01.T01 | MTR_3g108560 | 39.247 | 186 | 94 | 7 | 11 | 190 | 20 | 192 | 1.35e-23 | 98.6 |
MsG0380016794.01.T01 | MTR_3g082890 | 37.306 | 193 | 101 | 7 | 11 | 193 | 17 | 199 | 1.47e-23 | 100 |
MsG0380016794.01.T01 | MTR_3g108560 | 39.247 | 186 | 94 | 7 | 11 | 190 | 20 | 192 | 1.81e-23 | 99.4 |
MsG0380016794.01.T01 | MTR_7g056433 | 35.407 | 209 | 123 | 6 | 11 | 210 | 12 | 217 | 2.09e-23 | 99.4 |
MsG0380016794.01.T01 | MTR_3g036250 | 37.441 | 211 | 118 | 6 | 10 | 210 | 4 | 210 | 2.36e-23 | 99.0 |
MsG0380016794.01.T01 | MTR_7g115270 | 34.343 | 198 | 107 | 7 | 11 | 192 | 12 | 202 | 2.53e-23 | 99.4 |
MsG0380016794.01.T01 | MTR_3g105060 | 37.766 | 188 | 109 | 4 | 9 | 192 | 12 | 195 | 5.41e-23 | 97.8 |
MsG0380016794.01.T01 | MTR_3g109982 | 41.176 | 187 | 99 | 6 | 11 | 193 | 13 | 192 | 5.43e-23 | 99.8 |
MsG0380016794.01.T01 | MTR_2g007450 | 33.712 | 264 | 124 | 9 | 10 | 234 | 15 | 266 | 5.84e-23 | 98.6 |
MsG0380016794.01.T01 | MTR_3g110010 | 41.176 | 187 | 99 | 6 | 11 | 193 | 13 | 192 | 9.28e-23 | 99.0 |
MsG0380016794.01.T01 | MTR_5g073370 | 33.871 | 248 | 129 | 9 | 11 | 241 | 5 | 234 | 1.41e-22 | 97.1 |
MsG0380016794.01.T01 | MTR_5g039450 | 37.895 | 190 | 87 | 6 | 7 | 190 | 2 | 166 | 2.08e-22 | 96.3 |
MsG0380016794.01.T01 | MTR_5g039450 | 34.532 | 139 | 53 | 4 | 169 | 305 | 254 | 356 | 2.03e-11 | 64.3 |
MsG0380016794.01.T01 | MTR_3g108150 | 36.239 | 218 | 116 | 9 | 11 | 219 | 13 | 216 | 2.40e-22 | 96.3 |
MsG0380016794.01.T01 | MTR_6g022520 | 53.684 | 95 | 42 | 1 | 212 | 304 | 216 | 310 | 4.10e-22 | 94.7 |
MsG0380016794.01.T01 | MTR_6g022520 | 42.208 | 154 | 77 | 4 | 71 | 218 | 1 | 148 | 6.23e-19 | 85.9 |
MsG0380016794.01.T01 | MTR_7g075820 | 35.200 | 250 | 133 | 6 | 11 | 236 | 6 | 250 | 4.52e-22 | 95.5 |
MsG0380016794.01.T01 | MTR_5g083890 | 36.100 | 241 | 124 | 10 | 11 | 224 | 6 | 243 | 4.70e-22 | 96.3 |
MsG0380016794.01.T01 | MTR_2g007500 | 33.091 | 275 | 154 | 9 | 9 | 271 | 12 | 268 | 1.37e-21 | 93.6 |
MsG0380016794.01.T01 | MTR_3g107160 | 34.247 | 219 | 128 | 7 | 11 | 218 | 10 | 223 | 1.43e-21 | 94.0 |
MsG0380016794.01.T01 | MTR_3g107100 | 34.694 | 196 | 122 | 4 | 1 | 192 | 1 | 194 | 2.06e-21 | 94.0 |
MsG0380016794.01.T01 | MTR_7g098570 | 36.458 | 192 | 116 | 4 | 5 | 193 | 14 | 202 | 4.97e-21 | 93.2 |
MsG0380016794.01.T01 | MTR_2g005990 | 35.047 | 214 | 100 | 5 | 7 | 193 | 2 | 203 | 1.21e-20 | 91.7 |
MsG0380016794.01.T01 | MTR_0492s0020 | 34.389 | 221 | 131 | 5 | 11 | 228 | 86 | 295 | 2.43e-20 | 90.9 |
MsG0380016794.01.T01 | MTR_0543s0010 | 34.389 | 221 | 131 | 5 | 11 | 228 | 86 | 295 | 2.57e-20 | 90.9 |
MsG0380016794.01.T01 | MTR_3g087260 | 37.569 | 181 | 94 | 5 | 11 | 190 | 12 | 174 | 4.81e-20 | 90.5 |
MsG0380016794.01.T01 | MTR_3g087260 | 39.474 | 76 | 44 | 1 | 232 | 305 | 380 | 455 | 2.62e-11 | 64.3 |
MsG0380016794.01.T01 | MTR_7g034090 | 29.226 | 349 | 155 | 13 | 8 | 304 | 1 | 309 | 5.13e-20 | 90.1 |
MsG0380016794.01.T01 | MTR_7g060470 | 33.175 | 211 | 126 | 5 | 11 | 210 | 3 | 209 | 6.23e-20 | 89.4 |
MsG0380016794.01.T01 | MTR_7g056447 | 35.354 | 198 | 106 | 9 | 11 | 196 | 9 | 196 | 9.51e-20 | 87.8 |
MsG0380016794.01.T01 | MTR_5g039470 | 38.596 | 171 | 90 | 6 | 28 | 191 | 2 | 164 | 1.42e-19 | 87.8 |
MsG0380016794.01.T01 | MTR_7g056287 | 35.714 | 224 | 122 | 9 | 11 | 222 | 3 | 216 | 2.01e-19 | 87.8 |
MsG0380016794.01.T01 | MTR_7g088260 | 35.043 | 234 | 129 | 7 | 4 | 228 | 84 | 303 | 3.93e-19 | 87.8 |
MsG0380016794.01.T01 | MTR_7g088260 | 34.328 | 134 | 62 | 5 | 175 | 306 | 352 | 461 | 6.70e-11 | 63.2 |
MsG0380016794.01.T01 | MTR_7g056277 | 35.747 | 221 | 120 | 9 | 11 | 219 | 259 | 469 | 4.95e-19 | 87.8 |
MsG0380016794.01.T01 | MTR_2g007400 | 34.928 | 209 | 117 | 9 | 1 | 191 | 1 | 208 | 5.52e-19 | 87.0 |
MsG0380016794.01.T01 | MTR_3g099830 | 38.164 | 207 | 97 | 8 | 1 | 196 | 1 | 187 | 5.83e-19 | 86.7 |
MsG0380016794.01.T01 | MTR_5g061410 | 36.264 | 182 | 85 | 6 | 16 | 192 | 10 | 165 | 1.80e-18 | 84.0 |
MsG0380016794.01.T01 | MTR_2g008320 | 33.043 | 230 | 135 | 6 | 7 | 222 | 48 | 272 | 5.27e-18 | 84.3 |
MsG0380016794.01.T01 | MTR_7g034110 | 26.733 | 303 | 168 | 8 | 10 | 267 | 10 | 303 | 5.58e-18 | 83.6 |
MsG0380016794.01.T01 | MTR_7g033990 | 32.287 | 223 | 134 | 8 | 1 | 212 | 1 | 217 | 9.89e-18 | 83.2 |
MsG0380016794.01.T01 | MTR_8g062310 | 33.790 | 219 | 118 | 11 | 1 | 209 | 15 | 216 | 1.09e-17 | 83.2 |
MsG0380016794.01.T01 | MTR_3g114200 | 40.845 | 142 | 70 | 7 | 11 | 145 | 19 | 153 | 3.03e-17 | 77.8 |
MsG0380016794.01.T01 | MTR_7g033945 | 35.714 | 168 | 93 | 8 | 10 | 167 | 10 | 172 | 5.13e-17 | 77.8 |
MsG0380016794.01.T01 | MTR_8g465650 | 32.000 | 225 | 136 | 7 | 11 | 221 | 12 | 233 | 6.53e-17 | 80.5 |
MsG0380016794.01.T01 | MTR_5g033200 | 51.807 | 83 | 31 | 3 | 224 | 299 | 94 | 174 | 1.04e-16 | 77.0 |
MsG0380016794.01.T01 | MTR_5g008950 | 31.148 | 183 | 118 | 3 | 13 | 193 | 1 | 177 | 1.16e-16 | 80.1 |
MsG0380016794.01.T01 | MTR_6g022410 | 46.591 | 88 | 45 | 1 | 219 | 304 | 17 | 104 | 1.46e-16 | 74.7 |
MsG0380016794.01.T01 | MTR_5g012840 | 29.467 | 319 | 164 | 17 | 35 | 306 | 13 | 317 | 1.78e-16 | 79.0 |
MsG0380016794.01.T01 | MTR_7g033915 | 31.754 | 211 | 110 | 8 | 10 | 210 | 10 | 196 | 1.98e-16 | 79.3 |
MsG0380016794.01.T01 | MTR_1g053025 | 32.000 | 225 | 134 | 9 | 10 | 218 | 1 | 222 | 4.19e-16 | 78.6 |
MsG0380016794.01.T01 | MTR_7g034115 | 36.126 | 191 | 103 | 9 | 10 | 190 | 10 | 191 | 9.51e-16 | 77.4 |
MsG0380016794.01.T01 | MTR_7g056420 | 32.609 | 184 | 91 | 7 | 11 | 191 | 9 | 162 | 9.73e-16 | 78.2 |
MsG0380016794.01.T01 | MTR_7g056430 | 32.432 | 185 | 92 | 7 | 11 | 192 | 9 | 163 | 1.06e-15 | 78.2 |
MsG0380016794.01.T01 | MTR_2g008310 | 31.604 | 212 | 129 | 4 | 10 | 213 | 1 | 204 | 1.12e-15 | 77.0 |
MsG0380016794.01.T01 | MTR_4g093690 | 31.606 | 193 | 110 | 9 | 11 | 190 | 18 | 201 | 1.16e-15 | 75.9 |
MsG0380016794.01.T01 | MTR_7g007340 | 34.737 | 190 | 87 | 7 | 10 | 191 | 12 | 172 | 1.63e-15 | 76.6 |
MsG0380016794.01.T01 | MTR_1g095750 | 47.727 | 88 | 42 | 2 | 10 | 94 | 45 | 131 | 2.42e-15 | 72.0 |
MsG0380016794.01.T01 | MTR_5g063950 | 36.022 | 186 | 80 | 7 | 16 | 192 | 13 | 168 | 2.76e-15 | 75.9 |
MsG0380016794.01.T01 | MTR_5g063950 | 32.121 | 165 | 89 | 4 | 144 | 306 | 218 | 361 | 1.74e-13 | 70.5 |
MsG0380016794.01.T01 | MTR_4g056030 | 35.025 | 197 | 111 | 10 | 11 | 196 | 9 | 199 | 4.10e-15 | 75.9 |
MsG0380016794.01.T01 | MTR_5g008920 | 30.047 | 213 | 141 | 4 | 9 | 218 | 10 | 217 | 8.05e-15 | 74.7 |
MsG0380016794.01.T01 | MTR_8g070950 | 33.333 | 204 | 109 | 10 | 11 | 200 | 15 | 205 | 1.60e-14 | 73.9 |
MsG0380016794.01.T01 | MTR_4g134150 | 31.892 | 185 | 113 | 6 | 11 | 192 | 14 | 188 | 1.97e-14 | 71.6 |
MsG0380016794.01.T01 | MTR_7g022060 | 28.012 | 332 | 189 | 10 | 5 | 299 | 4 | 322 | 2.67e-14 | 72.8 |
MsG0380016794.01.T01 | MTR_8g465380 | 30.804 | 224 | 139 | 6 | 11 | 221 | 12 | 232 | 3.05e-14 | 72.8 |
MsG0380016794.01.T01 | MTR_1g107385 | 31.837 | 245 | 126 | 10 | 6 | 218 | 26 | 261 | 3.22e-14 | 73.2 |
MsG0380016794.01.T01 | MTR_4g098590 | 33.184 | 223 | 130 | 8 | 13 | 218 | 1 | 221 | 3.40e-14 | 72.8 |
MsG0380016794.01.T01 | MTR_3g107120 | 33.043 | 230 | 127 | 8 | 11 | 219 | 9 | 232 | 3.78e-14 | 72.8 |
MsG0380016794.01.T01 | MTR_4g032730 | 34.906 | 212 | 103 | 12 | 10 | 196 | 14 | 215 | 4.33e-14 | 72.8 |
MsG0380016794.01.T01 | MTR_7g098590 | 46.667 | 90 | 46 | 1 | 3 | 90 | 10 | 99 | 5.18e-14 | 68.2 |
MsG0380016794.01.T01 | MTR_8g058965 | 35.398 | 226 | 112 | 11 | 1 | 197 | 1 | 221 | 7.05e-14 | 72.0 |
MsG0380016794.01.T01 | MTR_4g056040 | 32.245 | 245 | 123 | 12 | 11 | 216 | 9 | 249 | 9.28e-14 | 72.0 |
MsG0380016794.01.T01 | MTR_1g492880 | 51.163 | 86 | 34 | 3 | 11 | 89 | 6 | 90 | 1.49e-13 | 65.9 |
MsG0380016794.01.T01 | MTR_1g492880 | 51.163 | 86 | 34 | 3 | 11 | 89 | 6 | 90 | 2.21e-13 | 65.9 |
MsG0380016794.01.T01 | MTR_1377s0010 | 37.903 | 124 | 48 | 3 | 157 | 278 | 35 | 131 | 2.65e-13 | 66.6 |
MsG0380016794.01.T01 | MTR_7g021930 | 28.012 | 332 | 189 | 10 | 5 | 299 | 4 | 322 | 3.43e-13 | 69.3 |
MsG0380016794.01.T01 | MTR_7g021970 | 28.012 | 332 | 189 | 10 | 5 | 299 | 4 | 322 | 3.43e-13 | 69.3 |
MsG0380016794.01.T01 | MTR_8g077460 | 27.688 | 372 | 192 | 16 | 6 | 304 | 5 | 372 | 1.02e-12 | 68.2 |
MsG0380016794.01.T01 | MTR_7g056020 | 32.751 | 229 | 116 | 8 | 11 | 235 | 16 | 210 | 1.06e-12 | 68.9 |
MsG0380016794.01.T01 | MTR_7g032370 | 30.337 | 178 | 108 | 7 | 23 | 192 | 2 | 171 | 1.21e-12 | 68.2 |
MsG0380016794.01.T01 | MTR_6g061720 | 54.688 | 64 | 22 | 1 | 16 | 72 | 13 | 76 | 1.32e-12 | 62.8 |
MsG0380016794.01.T01 | MTR_7g033940 | 45.161 | 93 | 41 | 4 | 10 | 99 | 93 | 178 | 2.05e-12 | 65.9 |
MsG0380016794.01.T01 | MTR_5g054920 | 31.461 | 178 | 79 | 6 | 117 | 277 | 29 | 180 | 2.28e-12 | 65.1 |
MsG0380016794.01.T01 | MTR_7g083740 | 29.730 | 222 | 116 | 5 | 9 | 219 | 15 | 207 | 2.30e-12 | 67.4 |
MsG0380016794.01.T01 | MTR_1g090900 | 34.857 | 175 | 96 | 7 | 11 | 176 | 11 | 176 | 2.85e-12 | 65.1 |
MsG0380016794.01.T01 | MTR_5g045700 | 58.696 | 46 | 19 | 0 | 13 | 58 | 15 | 60 | 3.36e-12 | 61.2 |
MsG0380016794.01.T01 | MTR_5g024060 | 30.769 | 156 | 72 | 5 | 152 | 299 | 73 | 200 | 3.80e-12 | 65.5 |
MsG0380016794.01.T01 | MTR_4g056020 | 34.021 | 194 | 105 | 11 | 11 | 190 | 9 | 193 | 4.41e-12 | 66.6 |
MsG0380016794.01.T01 | MTR_5g073400 | 38.017 | 121 | 54 | 6 | 100 | 208 | 23 | 134 | 5.98e-12 | 62.8 |
MsG0380016794.01.T01 | MTR_2g083840 | 31.863 | 204 | 119 | 9 | 6 | 193 | 16 | 215 | 6.40e-12 | 66.2 |
MsG0380016794.01.T01 | MTR_8g467800 | 34.804 | 204 | 105 | 11 | 3 | 190 | 12 | 203 | 6.46e-12 | 65.9 |
MsG0380016794.01.T01 | MTR_5g084070 | 35.602 | 191 | 114 | 6 | 3 | 191 | 5 | 188 | 7.46e-12 | 65.9 |
MsG0380016794.01.T01 | MTR_8g467800 | 34.804 | 204 | 105 | 11 | 3 | 190 | 12 | 203 | 9.25e-12 | 65.9 |
MsG0380016794.01.T01 | MTR_6g092430 | 30.899 | 178 | 106 | 7 | 11 | 176 | 10 | 182 | 1.54e-11 | 65.1 |
MsG0380016794.01.T01 | MTR_2g020170 | 39.344 | 122 | 57 | 6 | 11 | 123 | 22 | 135 | 1.88e-11 | 61.2 |
MsG0380016794.01.T01 | MTR_7g081290 | 50.000 | 80 | 33 | 3 | 11 | 84 | 18 | 96 | 2.96e-11 | 63.2 |
MsG0380016794.01.T01 | MTR_4g055580 | 31.466 | 232 | 97 | 11 | 11 | 190 | 100 | 321 | 5.82e-11 | 63.5 |
MsG0380016794.01.T01 | MTR_8g062010 | 32.000 | 200 | 101 | 11 | 9 | 188 | 7 | 191 | 6.11e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016794.01.T01 | AT1G55660 | 36.916 | 214 | 124 | 5 | 10 | 215 | 52 | 262 | 2.16e-23 | 99.0 |
MsG0380016794.01.T01 | AT1G55660 | 36.916 | 214 | 124 | 5 | 10 | 215 | 52 | 262 | 9.39e-23 | 98.6 |
MsG0380016794.01.T01 | AT5G53635 | 36.408 | 206 | 117 | 6 | 13 | 213 | 2 | 198 | 5.52e-21 | 92.8 |
MsG0380016794.01.T01 | AT4G10400 | 36.697 | 218 | 116 | 8 | 10 | 214 | 1 | 209 | 4.51e-20 | 90.1 |
MsG0380016794.01.T01 | AT4G10400 | 36.697 | 218 | 116 | 8 | 10 | 214 | 1 | 209 | 4.51e-20 | 90.1 |
MsG0380016794.01.T01 | AT4G10400 | 36.697 | 218 | 116 | 8 | 10 | 214 | 1 | 209 | 4.51e-20 | 90.1 |
MsG0380016794.01.T01 | AT4G00315 | 33.803 | 213 | 132 | 3 | 10 | 215 | 1 | 211 | 1.40e-19 | 89.0 |
MsG0380016794.01.T01 | AT5G38590 | 33.632 | 223 | 126 | 8 | 10 | 221 | 1 | 212 | 3.30e-19 | 86.3 |
MsG0380016794.01.T01 | AT3G59190 | 35.238 | 210 | 104 | 9 | 2 | 190 | 3 | 201 | 4.75e-19 | 87.0 |
MsG0380016794.01.T01 | AT5G38590 | 33.632 | 223 | 126 | 8 | 10 | 221 | 1 | 212 | 6.58e-19 | 86.7 |
MsG0380016794.01.T01 | AT3G59190 | 34.286 | 210 | 106 | 8 | 2 | 190 | 3 | 201 | 7.03e-19 | 87.0 |
MsG0380016794.01.T01 | AT4G09920 | 38.220 | 191 | 99 | 7 | 10 | 190 | 1 | 182 | 1.56e-18 | 84.3 |
MsG0380016794.01.T01 | AT4G09920 | 38.220 | 191 | 99 | 7 | 10 | 190 | 1 | 182 | 1.56e-18 | 84.3 |
MsG0380016794.01.T01 | AT4G09920 | 38.220 | 191 | 99 | 7 | 10 | 190 | 1 | 182 | 1.56e-18 | 84.3 |
MsG0380016794.01.T01 | AT4G09920 | 38.220 | 191 | 99 | 7 | 10 | 190 | 1 | 182 | 3.29e-18 | 84.0 |
MsG0380016794.01.T01 | AT4G09920 | 38.220 | 191 | 99 | 7 | 10 | 190 | 1 | 182 | 3.29e-18 | 84.0 |
MsG0380016794.01.T01 | AT2G42720 | 38.421 | 190 | 108 | 6 | 10 | 190 | 1 | 190 | 4.80e-18 | 84.3 |
MsG0380016794.01.T01 | AT4G15060 | 33.480 | 227 | 131 | 6 | 1 | 215 | 16 | 234 | 5.66e-18 | 84.3 |
MsG0380016794.01.T01 | AT3G59200 | 33.831 | 201 | 108 | 7 | 6 | 190 | 2 | 193 | 1.16e-17 | 82.8 |
MsG0380016794.01.T01 | AT4G15060 | 33.945 | 218 | 124 | 6 | 10 | 215 | 171 | 380 | 2.49e-17 | 82.8 |
MsG0380016794.01.T01 | AT3G59200 | 33.831 | 201 | 108 | 7 | 6 | 190 | 2 | 193 | 3.02e-17 | 82.4 |
MsG0380016794.01.T01 | AT5G22670 | 32.906 | 234 | 142 | 8 | 1 | 230 | 1 | 223 | 6.54e-17 | 81.3 |
MsG0380016794.01.T01 | AT5G41840 | 32.627 | 236 | 122 | 10 | 7 | 215 | 10 | 235 | 7.76e-17 | 81.3 |
MsG0380016794.01.T01 | AT4G00160 | 33.333 | 189 | 116 | 5 | 8 | 190 | 13 | 197 | 2.99e-16 | 79.3 |
MsG0380016794.01.T01 | AT1G78750 | 30.081 | 246 | 152 | 9 | 3 | 235 | 10 | 248 | 5.21e-16 | 78.6 |
MsG0380016794.01.T01 | AT1G78750 | 30.081 | 246 | 152 | 9 | 3 | 235 | 10 | 248 | 5.21e-16 | 78.6 |
MsG0380016794.01.T01 | AT4G00320 | 32.618 | 233 | 117 | 10 | 11 | 215 | 13 | 233 | 5.87e-16 | 78.6 |
MsG0380016794.01.T01 | AT5G41830 | 30.702 | 228 | 128 | 8 | 11 | 215 | 13 | 233 | 1.32e-15 | 77.4 |
MsG0380016794.01.T01 | AT5G56690 | 31.818 | 220 | 129 | 8 | 13 | 217 | 4 | 217 | 1.70e-15 | 76.6 |
MsG0380016794.01.T01 | AT4G14103 | 32.883 | 222 | 123 | 8 | 7 | 215 | 4 | 212 | 3.18e-15 | 75.9 |
MsG0380016794.01.T01 | AT4G14103 | 32.883 | 222 | 123 | 8 | 7 | 215 | 4 | 212 | 3.18e-15 | 75.9 |
MsG0380016794.01.T01 | AT4G14103 | 33.990 | 203 | 101 | 8 | 7 | 190 | 4 | 192 | 4.40e-15 | 75.9 |
MsG0380016794.01.T01 | AT3G59240 | 28.340 | 247 | 148 | 7 | 4 | 232 | 1 | 236 | 3.39e-14 | 73.2 |
MsG0380016794.01.T01 | AT2G04230 | 39.500 | 200 | 97 | 10 | 6 | 190 | 8 | 198 | 8.73e-14 | 72.0 |
MsG0380016794.01.T01 | AT3G58860 | 33.168 | 202 | 108 | 7 | 6 | 190 | 2 | 193 | 9.94e-14 | 71.6 |
MsG0380016794.01.T01 | AT3G50710 | 29.204 | 226 | 138 | 8 | 10 | 224 | 1 | 215 | 9.99e-14 | 71.6 |
MsG0380016794.01.T01 | AT5G56370 | 35.829 | 187 | 103 | 6 | 10 | 188 | 1 | 178 | 1.24e-13 | 71.2 |
MsG0380016794.01.T01 | AT5G56370 | 35.829 | 187 | 103 | 6 | 10 | 188 | 1 | 178 | 1.24e-13 | 71.2 |
MsG0380016794.01.T01 | AT5G56370 | 35.829 | 187 | 103 | 6 | 10 | 188 | 1 | 178 | 1.40e-13 | 70.5 |
MsG0380016794.01.T01 | AT3G52680 | 29.123 | 285 | 146 | 12 | 8 | 254 | 18 | 284 | 2.17e-13 | 70.9 |
MsG0380016794.01.T01 | AT5G56420 | 31.937 | 191 | 108 | 7 | 11 | 190 | 6 | 185 | 2.44e-13 | 70.5 |
MsG0380016794.01.T01 | AT5G56420 | 31.937 | 191 | 108 | 7 | 11 | 190 | 6 | 185 | 2.44e-13 | 70.5 |
MsG0380016794.01.T01 | AT5G56420 | 31.937 | 191 | 108 | 7 | 11 | 190 | 6 | 185 | 2.44e-13 | 70.5 |
MsG0380016794.01.T01 | AT4G14096 | 32.663 | 199 | 99 | 7 | 11 | 190 | 8 | 190 | 2.55e-13 | 70.5 |
MsG0380016794.01.T01 | AT4G14096 | 32.663 | 199 | 99 | 7 | 11 | 190 | 8 | 190 | 2.55e-13 | 70.5 |
MsG0380016794.01.T01 | AT5G60610 | 30.732 | 205 | 110 | 7 | 10 | 200 | 1 | 187 | 2.60e-13 | 70.1 |
MsG0380016794.01.T01 | AT5G60610 | 30.732 | 205 | 110 | 7 | 10 | 200 | 1 | 187 | 2.60e-13 | 70.1 |
MsG0380016794.01.T01 | AT3G52680 | 29.123 | 285 | 146 | 12 | 8 | 254 | 18 | 284 | 3.08e-13 | 69.7 |
MsG0380016794.01.T01 | AT1G48400 | 32.663 | 199 | 104 | 10 | 11 | 191 | 10 | 196 | 4.05e-13 | 70.1 |
MsG0380016794.01.T01 | AT1G64540 | 35.638 | 188 | 91 | 8 | 13 | 190 | 7 | 174 | 5.14e-13 | 69.7 |
MsG0380016794.01.T01 | AT1G64540 | 35.638 | 188 | 91 | 8 | 13 | 190 | 7 | 174 | 5.14e-13 | 69.7 |
MsG0380016794.01.T01 | AT3G58920 | 31.390 | 223 | 128 | 8 | 10 | 215 | 1 | 215 | 5.20e-13 | 69.7 |
MsG0380016794.01.T01 | AT1G48400 | 32.663 | 199 | 104 | 10 | 11 | 191 | 10 | 196 | 5.24e-13 | 69.7 |
MsG0380016794.01.T01 | AT3G49150 | 32.057 | 209 | 104 | 10 | 4 | 190 | 9 | 201 | 6.33e-13 | 69.3 |
MsG0380016794.01.T01 | AT5G25850 | 32.258 | 186 | 111 | 6 | 10 | 190 | 19 | 194 | 7.71e-13 | 68.9 |
MsG0380016794.01.T01 | AT5G38390 | 33.175 | 211 | 125 | 7 | 10 | 215 | 1 | 200 | 1.03e-12 | 68.6 |
MsG0380016794.01.T01 | AT5G56380 | 32.039 | 206 | 113 | 7 | 10 | 198 | 1 | 196 | 1.62e-12 | 68.2 |
MsG0380016794.01.T01 | AT5G56380 | 32.039 | 206 | 113 | 7 | 10 | 198 | 1 | 196 | 1.62e-12 | 68.2 |
MsG0380016794.01.T01 | AT2G26030 | 30.851 | 188 | 120 | 5 | 8 | 190 | 1 | 183 | 2.19e-12 | 67.8 |
MsG0380016794.01.T01 | AT2G26030 | 30.851 | 188 | 120 | 5 | 8 | 190 | 1 | 183 | 2.19e-12 | 67.8 |
MsG0380016794.01.T01 | AT2G26030 | 30.851 | 188 | 120 | 5 | 8 | 190 | 1 | 183 | 2.19e-12 | 67.8 |
MsG0380016794.01.T01 | AT3G58940 | 29.864 | 221 | 115 | 9 | 10 | 202 | 1 | 209 | 2.63e-12 | 67.8 |
MsG0380016794.01.T01 | AT3G58940 | 29.864 | 221 | 115 | 9 | 10 | 202 | 1 | 209 | 2.63e-12 | 67.8 |
MsG0380016794.01.T01 | AT5G53840 | 32.086 | 187 | 109 | 7 | 11 | 190 | 18 | 193 | 4.14e-12 | 66.6 |
MsG0380016794.01.T01 | AT2G26860 | 33.663 | 202 | 113 | 8 | 10 | 198 | 1 | 194 | 9.69e-12 | 65.5 |
MsG0380016794.01.T01 | AT2G26860 | 33.663 | 202 | 113 | 8 | 10 | 198 | 1 | 194 | 9.69e-12 | 65.5 |
MsG0380016794.01.T01 | AT3G60040 | 30.841 | 214 | 113 | 8 | 11 | 198 | 13 | 217 | 1.16e-11 | 65.9 |
MsG0380016794.01.T01 | AT5G22720 | 29.744 | 195 | 130 | 5 | 11 | 201 | 23 | 214 | 1.58e-11 | 65.1 |
MsG0380016794.01.T01 | AT3G42770 | 33.679 | 193 | 103 | 7 | 16 | 190 | 4 | 189 | 1.64e-11 | 65.1 |
MsG0380016794.01.T01 | AT3G60040 | 30.841 | 214 | 113 | 8 | 11 | 198 | 232 | 436 | 1.69e-11 | 65.5 |
MsG0380016794.01.T01 | AT3G60040 | 30.841 | 214 | 113 | 8 | 11 | 198 | 233 | 437 | 1.72e-11 | 65.5 |
MsG0380016794.01.T01 | AT4G13965 | 30.978 | 184 | 116 | 3 | 11 | 190 | 10 | 186 | 1.82e-11 | 64.7 |
MsG0380016794.01.T01 | AT4G26350 | 30.645 | 186 | 121 | 6 | 10 | 191 | 1 | 182 | 2.10e-11 | 64.7 |
MsG0380016794.01.T01 | AT3G60040 | 30.841 | 214 | 113 | 8 | 11 | 198 | 230 | 434 | 2.20e-11 | 65.1 |
MsG0380016794.01.T01 | AT3G60040 | 30.841 | 214 | 113 | 8 | 11 | 198 | 232 | 436 | 2.22e-11 | 65.1 |
MsG0380016794.01.T01 | AT5G22700 | 30.806 | 211 | 130 | 8 | 11 | 215 | 43 | 243 | 2.39e-11 | 64.7 |
MsG0380016794.01.T01 | AT5G22700 | 30.806 | 211 | 130 | 8 | 11 | 215 | 6 | 206 | 2.44e-11 | 64.3 |
MsG0380016794.01.T01 | AT5G22700 | 30.806 | 211 | 130 | 8 | 11 | 215 | 6 | 206 | 2.44e-11 | 64.3 |
MsG0380016794.01.T01 | AT5G22700 | 30.806 | 211 | 130 | 8 | 11 | 215 | 6 | 206 | 2.44e-11 | 64.3 |
MsG0380016794.01.T01 | AT5G22700 | 30.806 | 211 | 130 | 8 | 11 | 215 | 6 | 206 | 2.44e-11 | 64.3 |
MsG0380016794.01.T01 | AT5G22660 | 31.905 | 210 | 129 | 8 | 11 | 215 | 13 | 213 | 2.44e-11 | 63.9 |
MsG0380016794.01.T01 | AT5G22700 | 30.806 | 211 | 130 | 8 | 11 | 215 | 43 | 243 | 2.47e-11 | 64.3 |
MsG0380016794.01.T01 | AT5G38392 | 32.683 | 205 | 103 | 8 | 10 | 190 | 1 | 194 | 2.98e-11 | 62.4 |
MsG0380016794.01.T01 | AT3G59150 | 30.667 | 225 | 118 | 10 | 11 | 210 | 13 | 224 | 3.38e-11 | 63.9 |
MsG0380016794.01.T01 | AT5G22660 | 31.905 | 210 | 129 | 8 | 11 | 215 | 13 | 213 | 5.14e-11 | 63.5 |
MsG0380016794.01.T01 | AT3G59210 | 32.456 | 228 | 122 | 12 | 6 | 212 | 2 | 218 | 5.31e-11 | 63.5 |
MsG0380016794.01.T01 | AT3G59210 | 32.456 | 228 | 122 | 12 | 6 | 212 | 2 | 218 | 5.31e-11 | 63.5 |
MsG0380016794.01.T01 | AT3G59210 | 32.456 | 228 | 122 | 12 | 6 | 212 | 2 | 218 | 5.31e-11 | 63.5 |
MsG0380016794.01.T01 | AT3G59210 | 32.456 | 228 | 122 | 12 | 6 | 212 | 2 | 218 | 5.31e-11 | 63.5 |
MsG0380016794.01.T01 | AT3G59210 | 32.456 | 228 | 122 | 12 | 6 | 212 | 2 | 218 | 5.31e-11 | 63.5 |
MsG0380016794.01.T01 | AT5G38396 | 33.171 | 205 | 102 | 8 | 10 | 190 | 1 | 194 | 6.06e-11 | 63.2 |
MsG0380016794.01.T01 | AT5G56410 | 29.630 | 216 | 102 | 8 | 10 | 190 | 1 | 201 | 6.07e-11 | 63.5 |
MsG0380016794.01.T01 | AT1G69630 | 28.517 | 263 | 167 | 9 | 3 | 253 | 10 | 263 | 6.35e-11 | 63.2 |
MsG0380016794.01.T01 | AT1G21990 | 30.851 | 188 | 121 | 5 | 8 | 190 | 6 | 189 | 6.79e-11 | 63.2 |
MsG0380016794.01.T01 | AT3G56780 | 28.804 | 184 | 116 | 4 | 13 | 190 | 9 | 183 | 7.63e-11 | 63.2 |
MsG0380016794.01.T01 | AT3G56780 | 28.804 | 184 | 116 | 4 | 13 | 190 | 9 | 183 | 7.91e-11 | 62.8 |
MsG0380016794.01.T01 | AT5G53640 | 29.319 | 191 | 122 | 7 | 4 | 190 | 15 | 196 | 8.25e-11 | 61.2 |
MsG0380016794.01.T01 | AT3G58880 | 32.338 | 201 | 106 | 9 | 10 | 191 | 2 | 191 | 8.94e-11 | 62.8 |
MsG0380016794.01.T01 | AT3G58980 | 32.308 | 195 | 108 | 8 | 10 | 190 | 1 | 185 | 9.73e-11 | 62.8 |
Find 55 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACACATTCAATAGCTGAAAT+TGG | 0.191325 | 3:+87989523 | None:intergenic |
ACCAACAAATTTGAAATATA+GGG | 0.240544 | 3:+87989937 | None:intergenic |
AATTGGGCATTCCAAATCTT+TGG | 0.259017 | 3:+87989540 | None:intergenic |
AACCAACAAATTTGAAATAT+AGG | 0.263416 | 3:+87989936 | None:intergenic |
ACCCTATATTTCAAATTTGT+TGG | 0.293531 | 3:-87989938 | MsG0380016794.01.T01:CDS |
TACCAGCTTATCCAAAGATT+TGG | 0.313366 | 3:-87989551 | MsG0380016794.01.T01:CDS |
GTTCGGGAGGTGAGAATAAT+AGG | 0.331089 | 3:+87990034 | None:intergenic |
GATGTTAGTACTAGCTTATA+TGG | 0.353680 | 3:-87989394 | MsG0380016794.01.T01:CDS |
AATGGTGGTGTAAGCGAGTT+TGG | 0.373775 | 3:+87990336 | None:intergenic |
TGCAAAATATAAGTTGCAAA+TGG | 0.374797 | 3:+87989448 | None:intergenic |
TGTACTATTGTTAACTTCAA+TGG | 0.399248 | 3:-87989481 | MsG0380016794.01.T01:CDS |
GTTTCAGAATAACAAGGGTT+CGG | 0.401845 | 3:+87990017 | None:intergenic |
TTTCAGAATAACAAGGGTTC+GGG | 0.403014 | 3:+87990018 | None:intergenic |
TTCCAAATCTTTGGATAAGC+TGG | 0.426836 | 3:+87989549 | None:intergenic |
ATAAGTGATTGAAGGAGTTA+TGG | 0.436947 | 3:+87990257 | None:intergenic |
CTCTACATGTCGCAGTTTCG+AGG | 0.439230 | 3:+87990102 | None:intergenic |
CACATTCAATAGCTGAAATT+GGG | 0.443618 | 3:+87989524 | None:intergenic |
ATGTGACATAATATTTCATC+TGG | 0.447103 | 3:+87990376 | None:intergenic |
TTGTCCTTGTCTACGTTGGT+TGG | 0.459249 | 3:-87989797 | MsG0380016794.01.T01:CDS |
GTCAAAGTTGGAGGATTCAA+TGG | 0.460201 | 3:-87990422 | MsG0380016794.01.T01:CDS |
TTTCATCACTTCTAAAAGCC+TGG | 0.465680 | 3:+87989420 | None:intergenic |
GCAAAATATAAGTTGCAAAT+GGG | 0.468118 | 3:+87989449 | None:intergenic |
AATGTGTTTCGTCTCACCTC+AGG | 0.479682 | 3:-87989507 | MsG0380016794.01.T01:CDS |
TTACATCTCGGAGACATCCT+TGG | 0.494257 | 3:+87989331 | None:intergenic |
GTCCCTCCAACTTATATGCA+TGG | 0.495868 | 3:-87990135 | MsG0380016794.01.T01:CDS |
AAAACGACATAAGTGATTGA+AGG | 0.502947 | 3:+87990249 | None:intergenic |
ATCCTTGTCCTTGTCTACGT+TGG | 0.518573 | 3:-87989801 | MsG0380016794.01.T01:CDS |
TTCTACCCATGCATATAAGT+TGG | 0.525544 | 3:+87990129 | None:intergenic |
AATAATAGGATTCAACTTGA+AGG | 0.529250 | 3:+87990048 | None:intergenic |
TGAAGGAGTTATGGTTGAAG+CGG | 0.531587 | 3:+87990266 | None:intergenic |
CCTCAAGTTTCAGAATAACA+AGG | 0.532141 | 3:+87990011 | None:intergenic |
CCTTGTTATTCTGAAACTTG+AGG | 0.533620 | 3:-87990011 | MsG0380016794.01.T01:CDS |
GTATGCAAATCTTGAAGAAG+AGG | 0.535817 | 3:+87989872 | None:intergenic |
TACCCATGCATATAAGTTGG+AGG | 0.556236 | 3:+87990132 | None:intergenic |
TCCCTCCAACTTATATGCAT+GGG | 0.556519 | 3:-87990134 | MsG0380016794.01.T01:CDS |
CTCGAAACTGCGACATGTAG+AGG | 0.559377 | 3:-87990101 | MsG0380016794.01.T01:CDS |
CAGAATAACAAGGGTTCGGG+AGG | 0.570755 | 3:+87990021 | None:intergenic |
CGGAGACATCCTTGGACAGG+TGG | 0.583082 | 3:+87989339 | None:intergenic |
TATAACAAAAGTTTACATCT+CGG | 0.584879 | 3:+87989319 | None:intergenic |
TCTCGGAGACATCCTTGGAC+AGG | 0.590311 | 3:+87989336 | None:intergenic |
AAAAGTTATCCACCTGTCCA+AGG | 0.590806 | 3:-87989348 | MsG0380016794.01.T01:CDS |
CTCAAGTTTCAGAATAACAA+GGG | 0.604137 | 3:+87990012 | None:intergenic |
CCATTGTTCTTTCAAAGCGG+TGG | 0.604844 | 3:-87990318 | MsG0380016794.01.T01:CDS |
GTGGTGTAAGCGAGTTTGGT+CGG | 0.610377 | 3:+87990340 | None:intergenic |
GGCTCCAACCAACGTAGACA+AGG | 0.614620 | 3:+87989793 | None:intergenic |
ACCCATGCATATAAGTTGGA+GGG | 0.615921 | 3:+87990133 | None:intergenic |
CCACCATTGTTCTTTCAAAG+CGG | 0.638506 | 3:-87990321 | MsG0380016794.01.T01:CDS |
ATATAAGCTAGTACTAACAT+CGG | 0.641767 | 3:+87989396 | None:intergenic |
ATGGGTTGGTTTGACACGCG+AGG | 0.642700 | 3:+87990205 | None:intergenic |
CCACCGCTTTGAAAGAACAA+TGG | 0.686009 | 3:+87990318 | None:intergenic |
ACAGTGAGTGAATAGCAAAG+TGG | 0.688073 | 3:+87990292 | None:intergenic |
CCGCTTTGAAAGAACAATGG+TGG | 0.691677 | 3:+87990321 | None:intergenic |
TAACAATAGTACATGACCTG+AGG | 0.702693 | 3:+87989491 | None:intergenic |
AACCAACGTAGACAAGGACA+AGG | 0.705686 | 3:+87989799 | None:intergenic |
AGTCTAGAGAATGAAACACG+AGG | 0.779866 | 3:+87990170 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCAAATTCTTTTCATTAAAA+AGG | - | Chr3:87990077-87990096 | MsG0380016794.01.T01:CDS | 15.0% |
!! | TATAACAAAAGTTTACATCT+CGG | + | Chr3:87990426-87990445 | None:intergenic | 20.0% |
!! | TTTGTTTGTAAATTCTTTCA+CGG | - | Chr3:87990012-87990031 | MsG0380016794.01.T01:CDS | 20.0% |
!!! | AACCAACAAATTTGAAATAT+AGG | + | Chr3:87989809-87989828 | None:intergenic | 20.0% |
!!! | ACCAACAAATTTGAAATATA+GGG | + | Chr3:87989808-87989827 | None:intergenic | 20.0% |
! | AATAATAGGATTCAACTTGA+AGG | + | Chr3:87989697-87989716 | None:intergenic | 25.0% |
! | ACCCTATATTTCAAATTTGT+TGG | - | Chr3:87989804-87989823 | MsG0380016794.01.T01:CDS | 25.0% |
! | ATATAAGCTAGTACTAACAT+CGG | + | Chr3:87990349-87990368 | None:intergenic | 25.0% |
! | ATGTGACATAATATTTCATC+TGG | + | Chr3:87989369-87989388 | None:intergenic | 25.0% |
! | GCAAAATATAAGTTGCAAAT+GGG | + | Chr3:87990296-87990315 | None:intergenic | 25.0% |
! | TGCAAAATATAAGTTGCAAA+TGG | + | Chr3:87990297-87990316 | None:intergenic | 25.0% |
! | TGTACTATTGTTAACTTCAA+TGG | - | Chr3:87990261-87990280 | MsG0380016794.01.T01:CDS | 25.0% |
!! | AATGAAAAGAATTTGAAGCT+TGG | + | Chr3:87990073-87990092 | None:intergenic | 25.0% |
!! | ATGAAAAGAATTTGAAGCTT+GGG | + | Chr3:87990072-87990091 | None:intergenic | 25.0% |
!! | CTTTTCATTAAAAAGGTTTG+TGG | - | Chr3:87990084-87990103 | MsG0380016794.01.T01:CDS | 25.0% |
AAAACGACATAAGTGATTGA+AGG | + | Chr3:87989496-87989515 | None:intergenic | 30.0% | |
ACACATTCAATAGCTGAAAT+TGG | + | Chr3:87990222-87990241 | None:intergenic | 30.0% | |
ATAAGTGATTGAAGGAGTTA+TGG | + | Chr3:87989488-87989507 | None:intergenic | 30.0% | |
CACATTCAATAGCTGAAATT+GGG | + | Chr3:87990221-87990240 | None:intergenic | 30.0% | |
CTCAAGTTTCAGAATAACAA+GGG | + | Chr3:87989733-87989752 | None:intergenic | 30.0% | |
TTGTAAATTCTTTCACGGTT+GGG | - | Chr3:87990017-87990036 | MsG0380016794.01.T01:CDS | 30.0% | |
TTTGTAAATTCTTTCACGGT+TGG | - | Chr3:87990016-87990035 | MsG0380016794.01.T01:CDS | 30.0% | |
! | AACATCTTTTGAACTGACAT+CGG | + | Chr3:87989973-87989992 | None:intergenic | 30.0% |
! | GATGTTAGTACTAGCTTATA+TGG | - | Chr3:87990348-87990367 | MsG0380016794.01.T01:CDS | 30.0% |
AATTGGGCATTCCAAATCTT+TGG | + | Chr3:87990205-87990224 | None:intergenic | 35.0% | |
CCTCAAGTTTCAGAATAACA+AGG | + | Chr3:87989734-87989753 | None:intergenic | 35.0% | |
GTATGCAAATCTTGAAGAAG+AGG | + | Chr3:87989873-87989892 | None:intergenic | 35.0% | |
GTTTCAGAATAACAAGGGTT+CGG | + | Chr3:87989728-87989747 | None:intergenic | 35.0% | |
TAACAATAGTACATGACCTG+AGG | + | Chr3:87990254-87990273 | None:intergenic | 35.0% | |
TACCAGCTTATCCAAAGATT+TGG | - | Chr3:87990191-87990210 | MsG0380016794.01.T01:CDS | 35.0% | |
TTCCAAATCTTTGGATAAGC+TGG | + | Chr3:87990196-87990215 | None:intergenic | 35.0% | |
TTCTACCCATGCATATAAGT+TGG | + | Chr3:87989616-87989635 | None:intergenic | 35.0% | |
TTTCAGAATAACAAGGGTTC+GGG | + | Chr3:87989727-87989746 | None:intergenic | 35.0% | |
! | CTTATATTTTGCAGAATGCC+AGG | - | Chr3:87990304-87990323 | MsG0380016794.01.T01:CDS | 35.0% |
! | TTTCATCACTTCTAAAAGCC+TGG | + | Chr3:87990325-87990344 | None:intergenic | 35.0% |
!! | ACGAGGCTAAACGTTTTAAT+GGG | + | Chr3:87989558-87989577 | None:intergenic | 35.0% |
!! | CCTTGTTATTCTGAAACTTG+AGG | - | Chr3:87989731-87989750 | MsG0380016794.01.T01:intron | 35.0% |
!!! | AAATATAGGGTTTTGAGCGA+TGG | + | Chr3:87989795-87989814 | None:intergenic | 35.0% |
!!! | ATTTTTTATCCCTTCGACAG+TGG | - | Chr3:87990163-87990182 | MsG0380016794.01.T01:CDS | 35.0% |
AAAAGTTATCCACCTGTCCA+AGG | - | Chr3:87990394-87990413 | MsG0380016794.01.T01:CDS | 40.0% | |
AAATTCTTTCACGGTTGGGA+TGG | - | Chr3:87990021-87990040 | MsG0380016794.01.T01:CDS | 40.0% | |
ACAGTGAGTGAATAGCAAAG+TGG | + | Chr3:87989453-87989472 | None:intergenic | 40.0% | |
AGTCTAGAGAATGAAACACG+AGG | + | Chr3:87989575-87989594 | None:intergenic | 40.0% | |
CCACCATTGTTCTTTCAAAG+CGG | - | Chr3:87989421-87989440 | MsG0380016794.01.T01:CDS | 40.0% | |
GTCAAAGTTGGAGGATTCAA+TGG | - | Chr3:87989320-87989339 | MsG0380016794.01.T01:CDS | 40.0% | |
TCCCTCCAACTTATATGCAT+GGG | - | Chr3:87989608-87989627 | MsG0380016794.01.T01:intron | 40.0% | |
TGAAGGAGTTATGGTTGAAG+CGG | + | Chr3:87989479-87989498 | None:intergenic | 40.0% | |
! | ACCCATGCATATAAGTTGGA+GGG | + | Chr3:87989612-87989631 | None:intergenic | 40.0% |
! | CACGAGGCTAAACGTTTTAA+TGG | + | Chr3:87989559-87989578 | None:intergenic | 40.0% |
! | TACCCATGCATATAAGTTGG+AGG | + | Chr3:87989613-87989632 | None:intergenic | 40.0% |
!! | GGCTAAACGTTTTAATGGGT+TGG | + | Chr3:87989554-87989573 | None:intergenic | 40.0% |
AACCAACGTAGACAAGGACA+AGG | + | Chr3:87989946-87989965 | None:intergenic | 45.0% | |
AATGTGTTTCGTCTCACCTC+AGG | - | Chr3:87990235-87990254 | MsG0380016794.01.T01:CDS | 45.0% | |
ATCCTTGTCCTTGTCTACGT+TGG | - | Chr3:87989941-87989960 | MsG0380016794.01.T01:CDS | 45.0% | |
CCATTGTTCTTTCAAAGCGG+TGG | - | Chr3:87989424-87989443 | MsG0380016794.01.T01:CDS | 45.0% | |
GTCCCTCCAACTTATATGCA+TGG | - | Chr3:87989607-87989626 | MsG0380016794.01.T01:intron | 45.0% | |
GTTCGGGAGGTGAGAATAAT+AGG | + | Chr3:87989711-87989730 | None:intergenic | 45.0% | |
TTACATCTCGGAGACATCCT+TGG | + | Chr3:87990414-87990433 | None:intergenic | 45.0% | |
TTGTCCTTGTCTACGTTGGT+TGG | - | Chr3:87989945-87989964 | MsG0380016794.01.T01:CDS | 45.0% | |
! | AATGGTGGTGTAAGCGAGTT+TGG | + | Chr3:87989409-87989428 | None:intergenic | 45.0% |
!! | CCACCGCTTTGAAAGAACAA+TGG | + | Chr3:87989427-87989446 | None:intergenic | 45.0% |
!! | CCGCTTTGAAAGAACAATGG+TGG | + | Chr3:87989424-87989443 | None:intergenic | 45.0% |
CAGAATAACAAGGGTTCGGG+AGG | + | Chr3:87989724-87989743 | None:intergenic | 50.0% | |
CTCGAAACTGCGACATGTAG+AGG | - | Chr3:87989641-87989660 | MsG0380016794.01.T01:intron | 50.0% | |
CTCTACATGTCGCAGTTTCG+AGG | + | Chr3:87989643-87989662 | None:intergenic | 50.0% | |
GTGGTGTAAGCGAGTTTGGT+CGG | + | Chr3:87989405-87989424 | None:intergenic | 50.0% | |
!! | GGTATCGATCCACTGTCGAA+GGG | + | Chr3:87990175-87990194 | None:intergenic | 50.0% |
!! | TGGTATCGATCCACTGTCGA+AGG | + | Chr3:87990176-87990195 | None:intergenic | 50.0% |
GGCTCCAACCAACGTAGACA+AGG | + | Chr3:87989952-87989971 | None:intergenic | 55.0% | |
TCTCGGAGACATCCTTGGAC+AGG | + | Chr3:87990409-87990428 | None:intergenic | 55.0% | |
!! | ATGGGTTGGTTTGACACGCG+AGG | + | Chr3:87989540-87989559 | None:intergenic | 55.0% |
CGGAGACATCCTTGGACAGG+TGG | + | Chr3:87990406-87990425 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 87989318 | 87990446 | 87989318 | ID=MsG0380016794.01;Name=MsG0380016794.01 |
Chr3 | mRNA | 87989318 | 87990446 | 87989318 | ID=MsG0380016794.01.T01;Parent=MsG0380016794.01;Name=MsG0380016794.01.T01;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|2|0|306 |
Chr3 | exon | 87989790 | 87990446 | 87989790 | ID=MsG0380016794.01.T01:exon:22413;Parent=MsG0380016794.01.T01 |
Chr3 | exon | 87989318 | 87989581 | 87989318 | ID=MsG0380016794.01.T01:exon:22412;Parent=MsG0380016794.01.T01 |
Chr3 | CDS | 87989790 | 87990446 | 87989790 | ID=MsG0380016794.01.T01:cds;Parent=MsG0380016794.01.T01 |
Chr3 | CDS | 87989318 | 87989581 | 87989318 | ID=MsG0380016794.01.T01:cds;Parent=MsG0380016794.01.T01 |
Gene Sequence |
Protein sequence |