AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031415.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031415.01.T01 MTR_6g022360 63.010 392 66 4 82 394 16 407 9.79e-156 445
MsG0680031415.01.T01 MTR_7g055943 54.458 415 86 7 77 395 14 421 9.53e-126 370
MsG0680031415.01.T01 MTR_1g085120 48.718 390 107 5 99 395 82 471 1.33e-100 307
MsG0680031415.01.T01 MTR_1g085120 48.718 390 107 5 99 395 157 546 2.80e-100 308
MsG0680031415.01.T01 MTR_4g039440 48.953 382 103 6 106 395 31 412 2.66e-97 296
MsG0680031415.01.T01 MTR_6g011460 45.169 414 128 6 80 395 9 421 6.84e-92 283
MsG0680031415.01.T01 MTR_6g022500 45.780 391 123 6 94 395 86 476 1.25e-91 284
MsG0680031415.01.T01 MTR_6g022520 54.909 275 80 4 161 395 43 313 3.24e-78 244
MsG0680031415.01.T01 MTR_5g058100 43.386 378 121 9 108 394 8 383 2.36e-72 231
MsG0680031415.01.T01 MTR_6g033095 51.931 233 66 5 135 367 2 188 1.23e-62 200
MsG0680031415.01.T01 MTR_1g085120 45.333 300 72 4 99 306 169 468 4.54e-62 207
MsG0680031415.01.T01 MTR_5g058000 40.533 375 128 7 108 394 7 374 8.88e-62 204
MsG0680031415.01.T01 MTR_1g066830 44.718 284 113 6 151 394 107 386 6.46e-60 199
MsG0680031415.01.T01 MTR_1089s0010 45.848 277 114 6 151 395 107 379 1.87e-58 195
MsG0680031415.01.T01 MTR_1089s0010 56.897 58 25 0 108 165 7 64 7.93e-11 63.5
MsG0680031415.01.T01 MTR_5g073420 44.488 254 105 7 171 395 134 380 2.40e-58 195
MsG0680031415.01.T01 MTR_6g040270 43.369 279 120 7 151 395 107 381 1.37e-54 185
MsG0680031415.01.T01 MTR_6g044572 47.059 255 110 7 161 395 139 388 4.89e-53 181
MsG0680031415.01.T01 MTR_6g044572 31.364 220 122 7 108 305 1 213 1.74e-12 68.9
MsG0680031415.01.T01 MTR_6g044560 47.390 249 112 5 164 395 318 564 1.70e-51 181
MsG0680031415.01.T01 MTR_6g044560 29.600 250 141 8 82 305 149 389 7.26e-13 70.5
MsG0680031415.01.T01 MTR_7g026500 33.333 384 155 10 109 394 14 394 1.26e-48 170
MsG0680031415.01.T01 MTR_1g108820 36.198 384 141 12 108 393 7 384 2.29e-46 163
MsG0680031415.01.T01 MTR_1g108800 39.886 351 129 12 108 393 7 340 3.22e-44 157
MsG0680031415.01.T01 MTR_5g061680 37.979 287 113 7 108 331 10 294 9.27e-43 152
MsG0680031415.01.T01 MTR_5g045170 33.509 379 159 13 107 393 12 389 2.39e-42 153
MsG0680031415.01.T01 MTR_1377s0010 58.140 129 51 2 242 370 9 134 1.23e-41 143
MsG0680031415.01.T01 MTR_5g007410 33.957 374 149 10 111 387 28 400 8.66e-41 150
MsG0680031415.01.T01 MTR_3g095600 37.500 320 127 11 108 385 3 291 1.60e-36 135
MsG0680031415.01.T01 MTR_5g033200 59.524 126 47 3 242 367 29 150 1.99e-36 131
MsG0680031415.01.T01 MTR_7g032380 32.591 359 159 11 108 395 10 356 3.97e-36 135
MsG0680031415.01.T01 MTR_5g076150 41.553 219 76 6 160 328 11 227 4.70e-36 132
MsG0680031415.01.T01 MTR_6g045333 33.333 390 153 12 108 394 60 445 5.16e-36 137
MsG0680031415.01.T01 MTR_0009s0080 37.153 288 140 7 116 363 81 367 1.29e-34 133
MsG0680031415.01.T01 MTR_7g098510 33.428 353 133 14 108 366 17 361 1.75e-33 129
MsG0680031415.01.T01 MTR_5g063950 30.172 348 173 9 114 392 13 359 3.09e-33 127
MsG0680031415.01.T01 MTR_5g039450 30.387 362 164 10 108 392 5 355 7.71e-33 126
MsG0680031415.01.T01 MTR_5g045510 31.622 370 159 10 108 393 11 370 1.73e-32 126
MsG0680031415.01.T01 MTR_3g099830 30.214 374 161 13 108 393 11 372 2.42e-32 125
MsG0680031415.01.T01 MTR_3g071850 30.390 385 165 12 108 391 23 405 3.43e-31 126
MsG0680031415.01.T01 MTR_7g098480 31.214 346 144 10 108 364 17 357 1.26e-30 122
MsG0680031415.01.T01 MTR_3g095630 45.395 152 77 3 236 385 28 175 1.28e-30 116
MsG0680031415.01.T01 MTR_5g031970 32.464 345 169 12 108 393 15 354 3.13e-30 119
MsG0680031415.01.T01 MTR_2g007090 34.516 310 155 12 108 394 9 293 1.22e-29 116
MsG0680031415.01.T01 MTR_7g088260 31.117 376 166 13 109 395 91 462 1.76e-29 119
MsG0680031415.01.T01 MTR_1g041245 31.169 385 160 18 108 395 10 386 2.02e-29 117
MsG0680031415.01.T01 MTR_7g033915 29.775 356 180 11 108 394 10 364 5.52e-29 116
MsG0680031415.01.T01 MTR_3g023630 31.143 350 156 8 108 373 7 355 1.15e-28 115
MsG0680031415.01.T01 MTR_5g073370 37.611 226 104 7 175 368 132 352 1.46e-28 115
MsG0680031415.01.T01 MTR_2g036470 35.793 271 135 8 162 394 126 395 5.81e-28 114
MsG0680031415.01.T01 MTR_5g065100 32.659 346 158 12 114 394 13 348 6.71e-28 114
MsG0680031415.01.T01 MTR_5g073340 33.555 301 117 10 108 332 7 300 1.13e-27 111
MsG0680031415.01.T01 MTR_7g098570 30.347 346 149 11 108 364 19 361 1.22e-27 114
MsG0680031415.01.T01 MTR_5g054920 34.225 187 91 6 223 378 7 192 2.15e-27 107
MsG0680031415.01.T01 MTR_7g056433 29.765 383 168 10 109 395 12 389 4.05e-27 111
MsG0680031415.01.T01 MTR_3g036250 30.163 368 166 12 108 392 4 363 6.86e-27 110
MsG0680031415.01.T01 MTR_2g005990 28.429 401 160 12 108 393 5 393 2.38e-26 109
MsG0680031415.01.T01 MTR_3g108150 29.867 375 173 10 109 394 13 386 3.42e-26 108
MsG0680031415.01.T01 MTR_7g034115 29.810 369 169 15 107 387 9 375 4.24e-26 108
MsG0680031415.01.T01 MTR_3g105060 28.533 375 167 10 108 395 13 373 5.02e-26 108
MsG0680031415.01.T01 MTR_7g034120 32.806 253 138 8 170 395 61 308 1.77e-25 105
MsG0680031415.01.T01 MTR_7g007340 32.184 348 158 14 108 387 12 349 6.20e-25 105
MsG0680031415.01.T01 MTR_5g058350 43.038 158 59 2 107 233 6 163 1.04e-24 100
MsG0680031415.01.T01 MTR_3g107120 33.574 277 134 8 151 392 127 388 1.62e-24 104
MsG0680031415.01.T01 MTR_0543s0010 29.700 367 174 11 109 394 86 449 3.09e-24 104
MsG0680031415.01.T01 MTR_6g022410 57.143 91 38 1 306 395 17 107 3.49e-24 96.7
MsG0680031415.01.T01 MTR_2g007360 29.223 373 176 15 103 393 6 372 4.88e-24 102
MsG0680031415.01.T01 MTR_7g115270 27.224 371 149 10 109 367 12 373 2.43e-23 100
MsG0680031415.01.T01 MTR_5g024060 45.082 122 64 2 265 385 79 198 3.01e-23 98.2
MsG0680031415.01.T01 MTR_5g039470 33.036 224 110 7 175 359 105 327 3.74e-23 99.4
MsG0680031415.01.T01 MTR_7g032370 32.946 258 142 8 161 395 103 352 4.69e-23 99.4
MsG0680031415.01.T01 MTR_3g107100 31.343 268 132 6 175 395 136 398 1.11e-22 99.4
MsG0680031415.01.T01 MTR_8g085430 29.730 333 119 10 105 364 7 297 2.04e-22 97.4
MsG0680031415.01.T01 MTR_5g008950 25.341 367 190 10 111 395 1 365 3.73e-22 97.4
MsG0680031415.01.T01 MTR_5g008920 27.660 376 179 10 108 395 11 381 4.73e-22 97.1
MsG0680031415.01.T01 MTR_2g008320 27.062 388 172 13 108 395 51 427 5.13e-22 97.8
MsG0680031415.01.T01 MTR_7g007370 30.745 322 156 12 108 370 16 329 5.54e-22 96.3
MsG0680031415.01.T01 MTR_3g107160 27.344 384 166 13 109 392 10 380 1.39e-21 95.9
MsG0680031415.01.T01 MTR_7g056277 28.974 390 186 11 93 395 243 628 1.48e-21 97.1
MsG0680031415.01.T01 MTR_5g012840 34.513 226 126 6 175 395 110 318 3.43e-21 93.6
MsG0680031415.01.T01 MTR_2g007400 31.418 261 119 9 180 393 154 401 5.22e-21 94.4
MsG0680031415.01.T01 MTR_7g083740 30.000 360 170 16 108 394 16 366 7.14e-21 93.6
MsG0680031415.01.T01 MTR_2g008310 30.385 260 131 9 175 395 123 371 2.53e-20 92.4
MsG0680031415.01.T01 MTR_7g033990 30.180 222 127 5 194 389 158 377 2.55e-20 92.4
MsG0680031415.01.T01 MTR_3g467400 27.507 349 146 11 107 363 1 334 5.99e-20 90.9
MsG0680031415.01.T01 MTR_2g007450 31.802 283 123 11 168 393 149 418 8.96e-20 90.9
MsG0680031415.01.T01 MTR_7g034090 29.907 321 179 13 109 395 4 312 9.98e-20 90.9
MsG0680031415.01.T01 MTR_3g040700 27.217 327 157 10 108 355 42 366 1.48e-19 90.5
MsG0680031415.01.T01 MTR_7g007080 32.721 272 132 13 162 393 117 377 8.76e-19 87.8
MsG0680031415.01.T01 MTR_5g039490 32.377 244 146 5 164 394 138 375 1.18e-18 87.0
MsG0680031415.01.T01 MTR_7g056420 29.661 354 169 15 109 387 9 357 1.29e-18 88.6
MsG0680031415.01.T01 MTR_7g056020 27.381 336 157 9 109 365 16 343 1.42e-18 88.2
MsG0680031415.01.T01 MTR_7g056430 29.661 354 169 15 109 387 9 357 1.62e-18 88.2
MsG0680031415.01.T01 MTR_7g114710 31.048 248 152 8 159 395 125 364 1.69e-18 86.7
MsG0680031415.01.T01 MTR_1g107385 32.567 261 133 11 171 393 166 421 2.58e-18 86.7
MsG0680031415.01.T01 MTR_3g087260 30.651 261 141 7 170 394 200 456 2.71e-18 86.7
MsG0680031415.01.T01 MTR_3g087260 30.827 266 117 8 109 312 12 272 1.08e-14 75.9
MsG0680031415.01.T01 MTR_7g056287 32.283 254 141 9 170 395 122 372 3.41e-18 85.9
MsG0680031415.01.T01 MTR_1g059860 40.860 93 54 1 263 355 219 310 1.60e-17 83.2
MsG0680031415.01.T01 MTR_3g071790 40.816 98 55 1 263 357 105 202 1.66e-16 77.8
MsG0680031415.01.T01 MTR_6g022390 76.087 46 11 0 107 152 3 48 4.27e-16 75.5
MsG0680031415.01.T01 MTR_7g081290 28.136 295 148 11 109 395 18 256 5.20e-16 77.8
MsG0680031415.01.T01 MTR_7g075820 30.075 266 128 11 171 393 142 392 5.74e-16 79.3
MsG0680031415.01.T01 MTR_5g013500 31.148 244 120 9 198 395 124 365 1.62e-15 77.8
MsG0680031415.01.T01 MTR_3g109982 28.740 254 139 8 171 387 220 468 4.63e-15 77.4
MsG0680031415.01.T01 MTR_2g007550 36.842 133 65 3 265 392 214 332 9.30e-15 75.1
MsG0680031415.01.T01 MTR_4g098590 26.667 360 151 8 111 363 1 354 1.26e-14 75.1
MsG0680031415.01.T01 MTR_4g080610 28.205 351 177 15 111 394 14 356 1.86e-14 74.3
MsG0680031415.01.T01 MTR_7g056280 34.532 139 73 3 264 392 440 570 3.09e-13 71.6
MsG0680031415.01.T01 MTR_5g061410 28.185 259 119 8 114 306 10 267 3.47e-13 69.7
MsG0680031415.01.T01 MTR_7g034110 33.133 166 91 6 199 357 158 310 3.89e-13 70.5
MsG0680031415.01.T01 MTR_0571s0010 62.000 50 19 0 103 152 26 75 6.59e-13 65.1
MsG0680031415.01.T01 MTR_7g021990 28.679 265 142 10 175 395 168 429 6.94e-13 70.1
MsG0680031415.01.T01 MTR_7g021950 28.679 265 142 10 175 395 168 429 1.13e-12 69.7
MsG0680031415.01.T01 MTR_3g019190 35.032 157 87 6 70 218 8 157 1.18e-12 68.9
MsG0680031415.01.T01 MTR_5g083890 29.237 236 121 10 171 363 142 374 5.46e-12 67.8
MsG0680031415.01.T01 MTR_2g020180 33.094 139 71 5 265 395 91 215 1.26e-11 64.3
MsG0680031415.01.T01 MTR_7g022105 28.137 263 139 9 175 395 169 423 2.13e-11 65.5
MsG0680031415.01.T01 MTR_8g062010 34.586 133 81 3 266 395 301 430 5.61e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 93 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAACTGATGTCAGATTT+AGG 0.150526 6:-20130726 None:intergenic
GACGAAAATAACATGCTTTA+AGG 0.203935 6:-20130620 None:intergenic
ACACATTCAAGAACCGAAAT+TGG 0.216130 6:-20131238 None:intergenic
TTTCAGCATGCAAATCTTCT+AGG 0.250885 6:-20130795 None:intergenic
GACGCGGTGGCAGTGATTTC+CGG 0.255019 6:+20129508 MsG0680031415.01.T01:CDS
TTCTTCTTCTTCTACGGTTC+AGG 0.274363 6:+20130226 MsG0680031415.01.T01:CDS
AATCGGGATGGTCTGTTTAA+TGG 0.275714 6:+20130817 MsG0680031415.01.T01:CDS
AGAAACTGATGTCAGATTTA+GGG 0.299974 6:-20130725 None:intergenic
CAACATTTCTTGTAGTGAAT+AGG 0.306350 6:+20130192 MsG0680031415.01.T01:CDS
AACATTTCTTGTAGTGAATA+GGG 0.309976 6:+20130193 MsG0680031415.01.T01:CDS
GCAGAATGCGAGTCTCTTGC+AGG 0.326366 6:+20131339 MsG0680031415.01.T01:CDS
CTACAATTGTGAAAACAATT+TGG 0.339414 6:+20130274 MsG0680031415.01.T01:CDS
TCCCTGTTGTTGAGAGCTTC+CGG 0.344536 6:+20130417 MsG0680031415.01.T01:CDS
CTCCGGAAGCTCTCAACAAC+AGG 0.345619 6:-20130419 None:intergenic
AGTTTGATGGAAATTAAGTT+TGG 0.347579 6:-20130916 None:intergenic
ATGAAAAGAATTTGAAGCTT+GGG 0.354014 6:-20131000 None:intergenic
TGCTGCCCAAGGAAATCTTT+AGG 0.364307 6:+20131427 MsG0680031415.01.T01:CDS
AAGATTTGCATGCTGAAAAT+CGG 0.379037 6:+20130800 MsG0680031415.01.T01:CDS
TTGCTCCTGGCATTATTCCC+TGG 0.392547 6:+20130162 MsG0680031415.01.T01:CDS
CAAGTTTCTACCCGTAGATA+TGG 0.393971 6:+20130852 MsG0680031415.01.T01:CDS
GGCCGTAGTAAAAGCCAGTT+TGG 0.401558 6:-20130357 None:intergenic
GATTTCCGGCACGGTGGTTG+CGG 0.407914 6:+20129522 MsG0680031415.01.T01:CDS
TAGTTATTCACATATTTGTT+GGG 0.409856 6:+20130948 MsG0680031415.01.T01:CDS
GGAATGGAAATACCCAATTT+CGG 0.415950 6:+20131225 MsG0680031415.01.T01:CDS
CAAAATGTCATAGGAAAATA+CGG 0.416480 6:-20130093 None:intergenic
TAGTAAAAGCCAGTTTGGTT+TGG 0.417704 6:-20130352 None:intergenic
CTAGTTATTCACATATTTGT+TGG 0.421758 6:+20130947 MsG0680031415.01.T01:CDS
TTCAACTTCTTCTTCTTCTA+CGG 0.422741 6:+20130220 MsG0680031415.01.T01:CDS
ACTAGGAAACACTAGTTTGA+TGG 0.426483 6:-20130929 None:intergenic
ATTTGTGAGGGGCTTACCCC+TGG 0.430438 6:+20130053 MsG0680031415.01.T01:CDS
TTGCCAGGAGTTCTTGCTCC+TGG 0.436600 6:+20130149 MsG0680031415.01.T01:CDS
TTACATCCTAAAGATTTCCT+TGG 0.440641 6:-20131433 None:intergenic
ATGTAAAGCAATAACTCATC+TGG 0.442626 6:-20130317 None:intergenic
ATTTCCGGCACGGTGGTTGC+GGG 0.446491 6:+20129523 MsG0680031415.01.T01:CDS
AAACTTCAAAGTTTATATGT+TGG 0.447139 6:+20130664 MsG0680031415.01.T01:CDS
GGCATCCCTGGCATTGCACC+TGG 0.455405 6:+20130121 MsG0680031415.01.T01:CDS
CACATTCAAGAACCGAAATT+GGG 0.459372 6:-20131237 None:intergenic
TATTCACATATTTGTTGGGA+TGG 0.462931 6:+20130952 MsG0680031415.01.T01:CDS
AATGAAAAGAATTTGAAGCT+TGG 0.463983 6:-20131001 None:intergenic
AAGAAATGTTGCATATTGCC+AGG 0.469742 6:-20130180 None:intergenic
TACATCCTAAAGATTTCCTT+GGG 0.475023 6:-20131432 None:intergenic
TTTCCATTCCTCGGATAAGA+TGG 0.477274 6:-20131212 None:intergenic
AATTTGCCAGGTGCAATGCC+AGG 0.481415 6:-20130127 None:intergenic
AATTGGGTATTTCCATTCCT+CGG 0.482353 6:-20131221 None:intergenic
GAATTTGAAGCTTGGGACAA+TGG 0.482514 6:-20130993 None:intergenic
TTGCACCTGGCAAATTTGCC+AGG 0.484151 6:+20130134 MsG0680031415.01.T01:CDS
GAAATTAAGTTTGGAAAGAG+TGG 0.486527 6:-20130907 None:intergenic
CTTACCCCTGGTTCACGAAA+AGG 0.490111 6:+20130065 MsG0680031415.01.T01:CDS
TGCCCCTGGCAAAATGTCAT+AGG 0.495959 6:-20130102 None:intergenic
TCAAAGTTTATATGTTGGAA+AGG 0.503244 6:+20130669 MsG0680031415.01.T01:CDS
GGTCCACCGCTTGGAAAGAA+TGG 0.503981 6:-20130378 None:intergenic
AAGGCTCGGAAAATGATCTT+CGG 0.504464 6:+20131299 MsG0680031415.01.T01:CDS
GCAGAGTGAGGTCCACCGCT+TGG 0.517272 6:-20130387 None:intergenic
AGATTTGCATGCTGAAAATC+GGG 0.517292 6:+20130801 MsG0680031415.01.T01:CDS
TCAGGTTAATTGTTACTCAC+AGG 0.519862 6:+20130244 MsG0680031415.01.T01:CDS
GAACTCCTGGCAAATTTGCC+AGG 0.520699 6:-20130139 None:intergenic
ATGCCAGGAGCAAGAACTCC+TGG 0.521576 6:-20130152 None:intergenic
TTACCATCTTATCCGAGGAA+TGG 0.525331 6:+20131209 MsG0680031415.01.T01:CDS
TGCAATGCCAGGGATGCCCC+TGG 0.526506 6:-20130116 None:intergenic
CAACAAATATGTGAATAACT+AGG 0.528585 6:-20130946 None:intergenic
GCATGCAAATCTTCTAGGAT+AGG 0.534974 6:-20130790 None:intergenic
TTCACCCGCAACCACCGTGC+CGG 0.535384 6:-20129527 None:intergenic
TTTGTGCATTCCATATCTAC+GGG 0.540565 6:-20130862 None:intergenic
CGGCCATTCTTTCCAAGCGG+TGG 0.551073 6:+20130375 MsG0680031415.01.T01:CDS
GCATTACTACTAGAAGAACT+TGG 0.561068 6:+20131374 MsG0680031415.01.T01:CDS
AAATAACATGCTTTAAGGTG+TGG 0.562303 6:-20130615 None:intergenic
TATTGCCAGGGAATAATGCC+AGG 0.565737 6:-20130167 None:intergenic
GAAGCTTGGGACAATGGCGG+AGG 0.567359 6:-20130987 None:intergenic
AGAAATGTTGCATATTGCCA+GGG 0.577124 6:-20130179 None:intergenic
GGGGTTATTGAAATTTGTGA+GGG 0.582591 6:+20130041 MsG0680031415.01.T01:intron
AGATATGGAATGCACAAAAG+TGG 0.586203 6:+20130867 MsG0680031415.01.T01:CDS
ACATGCTTTAAGGTGTGGAA+AGG 0.586361 6:-20130610 None:intergenic
AAGTATTGTTCTGCTGCCCA+AGG 0.598674 6:+20131416 MsG0680031415.01.T01:CDS
AGGGGTTATTGAAATTTGTG+AGG 0.599824 6:+20130040 MsG0680031415.01.T01:intron
TTAAAATAGTACATGATCTG+AGG 0.605518 6:-20131270 None:intergenic
TAAGTTTGGAAAGAGTGGAA+TGG 0.605766 6:-20130902 None:intergenic
ATTTGCCAGGTGCAATGCCA+GGG 0.614775 6:-20130126 None:intergenic
TTGAAGTTTGAGAACAACAA+GGG 0.622283 6:-20130650 None:intergenic
GGTTAATTGTTACTCACAGG+AGG 0.622641 6:+20130247 MsG0680031415.01.T01:CDS
CTACGGCCATTCTTTCCAAG+CGG 0.624854 6:+20130372 MsG0680031415.01.T01:CDS
GGAAATCACTGCCACCGCGT+CGG 0.627590 6:-20129506 None:intergenic
AAAATGTCATAGGAAAATAC+GGG 0.628161 6:-20130092 None:intergenic
TTTGAAGCTTGGGACAATGG+CGG 0.636824 6:-20130990 None:intergenic
TGACATTATTGACAAAACTC+CGG 0.638691 6:-20130436 None:intergenic
GAGGTTTACCATCTTATCCG+AGG 0.641357 6:+20131204 MsG0680031415.01.T01:CDS
ACCCCTGGTTCACGAAAAGG+TGG 0.642585 6:+20130068 MsG0680031415.01.T01:CDS
GGTGGCAGTGATTTCCGGCA+CGG 0.643322 6:+20129513 MsG0680031415.01.T01:CDS
GGGTTATTGAAATTTGTGAG+GGG 0.656360 6:+20130042 MsG0680031415.01.T01:CDS
TTGCATGCTGAAAATCGGGA+TGG 0.658107 6:+20130805 MsG0680031415.01.T01:CDS
AGGGAGTGAATAGCAGAGTG+AGG 0.671789 6:-20130399 None:intergenic
TCCGGAAGCTCTCAACAACA+GGG 0.672303 6:-20130418 None:intergenic
TTTGAAGTTTGAGAACAACA+AGG 0.674842 6:-20130651 None:intergenic
GGCAGTGATTTCCGGCACGG+TGG 0.689796 6:+20129516 MsG0680031415.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACATTTATCAAAATATA+TGG - Chr6:20131061-20131080 None:intergenic 10.0%
!!! TCAAATTCTTTTCATTAAAA+AGG + Chr6:20131008-20131027 MsG0680031415.01.T01:CDS 15.0%
!! AAACTTCAAAGTTTATATGT+TGG + Chr6:20130664-20130683 MsG0680031415.01.T01:CDS 20.0%
!! AACCAATCGATAAAATAAAT+GGG + Chr6:20129690-20129709 MsG0680031415.01.T01:intron 20.0%
!! ATTATTATTCATTTAGTGCA+AGG - Chr6:20129891-20129910 None:intergenic 20.0%
!! TAACCAATCGATAAAATAAA+TGG + Chr6:20129689-20129708 MsG0680031415.01.T01:intron 20.0%
!! TAGTTATTCACATATTTGTT+GGG + Chr6:20130948-20130967 MsG0680031415.01.T01:CDS 20.0%
!! TTATTATTCATTTAGTGCAA+GGG - Chr6:20129890-20129909 None:intergenic 20.0%
!!! TGTACTATTTTAAACTTACA+AGG + Chr6:20131280-20131299 MsG0680031415.01.T01:CDS 20.0%
!!! TGTTATTTGATTGATCATTA+TGG + Chr6:20131075-20131094 MsG0680031415.01.T01:intron 20.0%
! AAAATGTCATAGGAAAATAC+GGG - Chr6:20130095-20130114 None:intergenic 25.0%
! AACATTTCTTGTAGTGAATA+GGG + Chr6:20130193-20130212 MsG0680031415.01.T01:CDS 25.0%
! AGTTTGATGGAAATTAAGTT+TGG - Chr6:20130919-20130938 None:intergenic 25.0%
! CAAAATGTCATAGGAAAATA+CGG - Chr6:20130096-20130115 None:intergenic 25.0%
! CAACAAATATGTGAATAACT+AGG - Chr6:20130949-20130968 None:intergenic 25.0%
! CTACAATTGTGAAAACAATT+TGG + Chr6:20130274-20130293 MsG0680031415.01.T01:CDS 25.0%
! CTAGTTATTCACATATTTGT+TGG + Chr6:20130947-20130966 MsG0680031415.01.T01:CDS 25.0%
! TCAAAGTTTATATGTTGGAA+AGG + Chr6:20130669-20130688 MsG0680031415.01.T01:CDS 25.0%
! TTAAAATAGTACATGATCTG+AGG - Chr6:20131273-20131292 None:intergenic 25.0%
!! AATGAAAAGAATTTGAAGCT+TGG - Chr6:20131004-20131023 None:intergenic 25.0%
!! ATCAGTTTCTTTTCAAAATC+GGG + Chr6:20130738-20130757 MsG0680031415.01.T01:CDS 25.0%
!! ATGAAAAGAATTTGAAGCTT+GGG - Chr6:20131003-20131022 None:intergenic 25.0%
!! CATCAGTTTCTTTTCAAAAT+CGG + Chr6:20130737-20130756 MsG0680031415.01.T01:CDS 25.0%
!!! TACCCATTTATTTTATCGAT+TGG - Chr6:20129695-20129714 None:intergenic 25.0%
!!! TATTTTAAACTTACAAGGCT+CGG + Chr6:20131285-20131304 MsG0680031415.01.T01:CDS 25.0%
!!! TTGAGGCAAATTTTTTTGAT+GGG - Chr6:20130488-20130507 None:intergenic 25.0%
AAGAAACTGATGTCAGATTT+AGG - Chr6:20130729-20130748 None:intergenic 30.0%
AAGATTTGCATGCTGAAAAT+CGG + Chr6:20130800-20130819 MsG0680031415.01.T01:CDS 30.0%
AGAAACTGATGTCAGATTTA+GGG - Chr6:20130728-20130747 None:intergenic 30.0%
AGATGAATTTCCTGTATATG+AGG - Chr6:20130583-20130602 None:intergenic 30.0%
ATGTAAAGCAATAACTCATC+TGG - Chr6:20130320-20130339 None:intergenic 30.0%
CAACATTTCTTGTAGTGAAT+AGG + Chr6:20130192-20130211 MsG0680031415.01.T01:CDS 30.0%
GAAATTAAGTTTGGAAAGAG+TGG - Chr6:20130910-20130929 None:intergenic 30.0%
GAAGAACTTGGAAAAAAAGT+TGG + Chr6:20131386-20131405 MsG0680031415.01.T01:CDS 30.0%
GACGAAAATAACATGCTTTA+AGG - Chr6:20130623-20130642 None:intergenic 30.0%
GCGTTGCAGTAAAAAAATAT+GGG - Chr6:20129968-20129987 None:intergenic 30.0%
GTAGATTTAACGTGACAAAT+TGG + Chr6:20130539-20130558 MsG0680031415.01.T01:intron 30.0%
TACATCCTAAAGATTTCCTT+GGG - Chr6:20131435-20131454 None:intergenic 30.0%
TGACATTATTGACAAAACTC+CGG - Chr6:20130439-20130458 None:intergenic 30.0%
TGACTAGAAATTAAGAGAGA+AGG + Chr6:20129643-20129662 MsG0680031415.01.T01:intron 30.0%
TGCAAAAAAACCTCATATAC+AGG + Chr6:20130570-20130589 MsG0680031415.01.T01:intron 30.0%
TTACATCCTAAAGATTTCCT+TGG - Chr6:20131436-20131455 None:intergenic 30.0%
TTCAACTTCTTCTTCTTCTA+CGG + Chr6:20130220-20130239 MsG0680031415.01.T01:CDS 30.0%
TTGAAGTTTGAGAACAACAA+GGG - Chr6:20130653-20130672 None:intergenic 30.0%
! AATTTTTATCCCATTTGCAG+TGG + Chr6:20131182-20131201 MsG0680031415.01.T01:intron 30.0%
! CGTTAAATCTACTATTTTCC+TGG - Chr6:20130531-20130550 None:intergenic 30.0%
! TATTCACATATTTGTTGGGA+TGG + Chr6:20130952-20130971 MsG0680031415.01.T01:CDS 30.0%
! TTTGAAGTTTGAGAACAACA+AGG - Chr6:20130654-20130673 None:intergenic 30.0%
! TTTTGTGCATTCCATATCTA+CGG - Chr6:20130866-20130885 None:intergenic 30.0%
!! AAATAACATGCTTTAAGGTG+TGG - Chr6:20130618-20130637 None:intergenic 30.0%
!! AAATGGGTAGTTTTTGAAGA+GGG + Chr6:20129706-20129725 MsG0680031415.01.T01:intron 30.0%
!! TAAATGGGTAGTTTTTGAAG+AGG + Chr6:20129705-20129724 MsG0680031415.01.T01:intron 30.0%
!!! AATTTTTTTGATGGGTTGGT+CGG - Chr6:20130480-20130499 None:intergenic 30.0%
!!! CTTGAGGCAAATTTTTTTGA+TGG - Chr6:20130489-20130508 None:intergenic 30.0%
AAGAAATGTTGCATATTGCC+AGG - Chr6:20130183-20130202 None:intergenic 35.0%
AATTGGGTATTTCCATTCCT+CGG - Chr6:20131224-20131243 None:intergenic 35.0%
ACACATTCAAGAACCGAAAT+TGG - Chr6:20131241-20131260 None:intergenic 35.0%
AGAAATGTTGCATATTGCCA+GGG - Chr6:20130182-20130201 None:intergenic 35.0%
AGATATGGAATGCACAAAAG+TGG + Chr6:20130867-20130886 MsG0680031415.01.T01:CDS 35.0%
AGATTTGCATGCTGAAAATC+GGG + Chr6:20130801-20130820 MsG0680031415.01.T01:CDS 35.0%
AGGCCCAAAATCAAATTCAA+CGG - Chr6:20130009-20130028 None:intergenic 35.0%
AGGGGTTATTGAAATTTGTG+AGG + Chr6:20130040-20130059 MsG0680031415.01.T01:intron 35.0%
ATGTAGCTAAACTCACTTAG+TGG + Chr6:20131118-20131137 MsG0680031415.01.T01:intron 35.0%
CACATTCAAGAACCGAAATT+GGG - Chr6:20131240-20131259 None:intergenic 35.0%
GAGTTTAGCTACATTATGCA+TGG - Chr6:20131112-20131131 None:intergenic 35.0%
GCATTACTACTAGAAGAACT+TGG + Chr6:20131374-20131393 MsG0680031415.01.T01:CDS 35.0%
GGAATGGAAATACCCAATTT+CGG + Chr6:20131225-20131244 MsG0680031415.01.T01:CDS 35.0%
GGCGTTGCAGTAAAAAAATA+TGG - Chr6:20129969-20129988 None:intergenic 35.0%
GGGGTTATTGAAATTTGTGA+GGG + Chr6:20130041-20130060 MsG0680031415.01.T01:intron 35.0%
GGGTTATTGAAATTTGTGAG+GGG + Chr6:20130042-20130061 MsG0680031415.01.T01:CDS 35.0%
TAACATCATGAGGAAGAAGA+TGG + Chr6:20129589-20129608 MsG0680031415.01.T01:intron 35.0%
TAAGAGAGAAGGTGATGATT+GGG + Chr6:20129654-20129673 MsG0680031415.01.T01:intron 35.0%
TAAGTTTGGAAAGAGTGGAA+TGG - Chr6:20130905-20130924 None:intergenic 35.0%
TAGTAAAAGCCAGTTTGGTT+TGG - Chr6:20130355-20130374 None:intergenic 35.0%
TCACAAATTTCAATAACCCC+TGG - Chr6:20130041-20130060 None:intergenic 35.0%
TCAGGTTAATTGTTACTCAC+AGG + Chr6:20130244-20130263 MsG0680031415.01.T01:CDS 35.0%
TTAAGAGAGAAGGTGATGAT+TGG + Chr6:20129653-20129672 MsG0680031415.01.T01:intron 35.0%
TTTCAGCATGCAAATCTTCT+AGG - Chr6:20130798-20130817 None:intergenic 35.0%
TTTGTGCATTCCATATCTAC+GGG - Chr6:20130865-20130884 None:intergenic 35.0%
! AATCTACTATTTTCCTGGTG+TGG - Chr6:20130526-20130545 None:intergenic 35.0%
! ACTAGGAAACACTAGTTTGA+TGG - Chr6:20130932-20130951 None:intergenic 35.0%
! ATAACCCCTGGCAAAATTTT+AGG - Chr6:20130029-20130048 None:intergenic 35.0%
! GGTATCTAAAGTCATACTTG+AGG - Chr6:20130505-20130524 None:intergenic 35.0%
! TGCAAATAATTTTTCCGACG+CGG + Chr6:20129492-20129511 MsG0680031415.01.T01:CDS 35.0%
! TTTCCTATGACATTTTGCCA+GGG + Chr6:20130099-20130118 MsG0680031415.01.T01:CDS 35.0%
! TTTTCCTATGACATTTTGCC+AGG + Chr6:20130098-20130117 MsG0680031415.01.T01:CDS 35.0%
!! AATGGGTAGTTTTTGAAGAG+GGG + Chr6:20129707-20129726 MsG0680031415.01.T01:intron 35.0%
!! GTTTTGTTGCTAACATCATG+AGG + Chr6:20129579-20129598 MsG0680031415.01.T01:intron 35.0%
!!! AACCAAACTGGCTTTTACTA+CGG + Chr6:20130355-20130374 MsG0680031415.01.T01:CDS 35.0%
!!! AGATTTAGGGTTTTGAGTGA+TGG - Chr6:20130715-20130734 None:intergenic 35.0%
!!! GGCAAATTTTTTTGATGGGT+TGG - Chr6:20130484-20130503 None:intergenic 35.0%
!!! GGGTTTGGTTTTTCAAAAAG+AGG + Chr6:20129613-20129632 MsG0680031415.01.T01:intron 35.0%
AAAAGGAAGAAGAAGTCGCA+AGG + Chr6:20129824-20129843 MsG0680031415.01.T01:intron 40.0%
AAGAGAGAAGGTGATGATTG+GGG + Chr6:20129655-20129674 MsG0680031415.01.T01:intron 40.0%
AAGGCTCGGAAAATGATCTT+CGG + Chr6:20131299-20131318 MsG0680031415.01.T01:CDS 40.0%
AATCGGGATGGTCTGTTTAA+TGG + Chr6:20130817-20130836 MsG0680031415.01.T01:CDS 40.0%
ATCATGAGGAAGAAGATGGT+GGG + Chr6:20129593-20129612 MsG0680031415.01.T01:intron 40.0%
ATGACTTTAGATACCACACC+AGG + Chr6:20130510-20130529 MsG0680031415.01.T01:intron 40.0%
ATGTTAGCAACAAAACCCCT+CGG - Chr6:20129575-20129594 None:intergenic 40.0%
CAAGTTTCTACCCGTAGATA+TGG + Chr6:20130852-20130871 MsG0680031415.01.T01:CDS 40.0%
CCCAAAATCAAATTCAACGG+GGG - Chr6:20130006-20130025 None:intergenic 40.0%
CCCTCGGTTTATTTCATGAT+CGG - Chr6:20129559-20129578 None:intergenic 40.0%
CCGATCATGAAATAAACCGA+GGG + Chr6:20129556-20129575 MsG0680031415.01.T01:intron 40.0%
CGATCATGAAATAAACCGAG+GGG + Chr6:20129557-20129576 MsG0680031415.01.T01:intron 40.0%
GAGGTATGATTGTGAAGTTG+TGG + Chr6:20129769-20129788 MsG0680031415.01.T01:intron 40.0%
GCCCAAAATCAAATTCAACG+GGG - Chr6:20130007-20130026 None:intergenic 40.0%
GGCCCAAAATCAAATTCAAC+GGG - Chr6:20130008-20130027 None:intergenic 40.0%
GGTTAATTGTTACTCACAGG+AGG + Chr6:20130247-20130266 MsG0680031415.01.T01:CDS 40.0%
GTATGATTGTGAAGTTGTGG+TGG + Chr6:20129772-20129791 MsG0680031415.01.T01:intron 40.0%
TCCGATCATGAAATAAACCG+AGG + Chr6:20129555-20129574 MsG0680031415.01.T01:intron 40.0%
TTACCATCTTATCCGAGGAA+TGG + Chr6:20131209-20131228 MsG0680031415.01.T01:CDS 40.0%
TTCTTCTTCTTCTACGGTTC+AGG + Chr6:20130226-20130245 MsG0680031415.01.T01:CDS 40.0%
TTGTGGTGGCTGAAAGAATT+GGG + Chr6:20129786-20129805 MsG0680031415.01.T01:intron 40.0%
TTTCCATTCCTCGGATAAGA+TGG - Chr6:20131215-20131234 None:intergenic 40.0%
! AAATAATTTTTCCGACGCGG+TGG + Chr6:20129495-20129514 MsG0680031415.01.T01:CDS 40.0%
! CTCTTTTCTCCAAACCAAAC+TGG + Chr6:20130343-20130362 MsG0680031415.01.T01:CDS 40.0%
! GAATTTGAAGCTTGGGACAA+TGG - Chr6:20130996-20131015 None:intergenic 40.0%
! TTCCTATGACATTTTGCCAG+GGG + Chr6:20130100-20130119 MsG0680031415.01.T01:CDS 40.0%
! TTGGGCCTAAAATTTTGCCA+GGG + Chr6:20130021-20130040 MsG0680031415.01.T01:intron 40.0%
! TTTGGGCCTAAAATTTTGCC+AGG + Chr6:20130020-20130039 MsG0680031415.01.T01:intron 40.0%
! TTTTATCCCATTTGCAGTGG+AGG + Chr6:20131185-20131204 MsG0680031415.01.T01:intron 40.0%
!! ACATGCTTTAAGGTGTGGAA+AGG - Chr6:20130613-20130632 None:intergenic 40.0%
!! ATGGGTAGTTTTTGAAGAGG+GGG + Chr6:20129708-20129727 MsG0680031415.01.T01:intron 40.0%
!! CCCCCGTTGAATTTGATTTT+GGG + Chr6:20130003-20130022 MsG0680031415.01.T01:intron 40.0%
!! GCATGCAAATCTTCTAGGAT+AGG - Chr6:20130793-20130812 None:intergenic 40.0%
!! TCCCCCGTTGAATTTGATTT+TGG + Chr6:20130002-20130021 MsG0680031415.01.T01:intron 40.0%
ATCAAATTCAACGGGGGAAC+AGG - Chr6:20130000-20130019 None:intergenic 45.0%
CATCATGAGGAAGAAGATGG+TGG + Chr6:20129592-20129611 MsG0680031415.01.T01:intron 45.0%
GAGGTTTACCATCTTATCCG+AGG + Chr6:20131204-20131223 MsG0680031415.01.T01:CDS 45.0%
GCTGAAAGAATTGGGAGGTA+GGG + Chr6:20129794-20129813 MsG0680031415.01.T01:intron 45.0%
GGTAAACCTCCACTGCAAAT+GGG - Chr6:20131194-20131213 None:intergenic 45.0%
GTTGTGGTGGCTGAAAGAAT+TGG + Chr6:20129785-20129804 MsG0680031415.01.T01:intron 45.0%
TATTGCCAGGGAATAATGCC+AGG - Chr6:20130170-20130189 None:intergenic 45.0%
TGCTGCCCAAGGAAATCTTT+AGG + Chr6:20131427-20131446 MsG0680031415.01.T01:CDS 45.0%
TGGTAAACCTCCACTGCAAA+TGG - Chr6:20131195-20131214 None:intergenic 45.0%
TTGCATGCTGAAAATCGGGA+TGG + Chr6:20130805-20130824 MsG0680031415.01.T01:CDS 45.0%
! AAGTATTGTTCTGCTGCCCA+AGG + Chr6:20131416-20131435 MsG0680031415.01.T01:CDS 45.0%
! TGGGCCTAAAATTTTGCCAG+GGG + Chr6:20130022-20130041 MsG0680031415.01.T01:intron 45.0%
! TTTGAAGCTTGGGACAATGG+CGG - Chr6:20130993-20131012 None:intergenic 45.0%
!!! TTTTTGATGGGTTGGTCGGT+TGG - Chr6:20130476-20130495 None:intergenic 45.0%
!! AATAATAATAATAATAAACA+AGG + Chr6:20129938-20129957 MsG0680031415.01.T01:intron 5.0%
!! ATAATAATAATAATAAACAA+GGG + Chr6:20129939-20129958 MsG0680031415.01.T01:intron 5.0%
AATTTGCCAGGTGCAATGCC+AGG - Chr6:20130130-20130149 None:intergenic 50.0%
AGGGAGTGAATAGCAGAGTG+AGG - Chr6:20130402-20130421 None:intergenic 50.0%
ATTTGCCAGGTGCAATGCCA+GGG - Chr6:20130129-20130148 None:intergenic 50.0%
CTACGGCCATTCTTTCCAAG+CGG + Chr6:20130372-20130391 MsG0680031415.01.T01:CDS 50.0%
CTTACCCCTGGTTCACGAAA+AGG + Chr6:20130065-20130084 MsG0680031415.01.T01:CDS 50.0%
GAACTCCTGGCAAATTTGCC+AGG - Chr6:20130142-20130161 None:intergenic 50.0%
GGAGGTAGGGTTCAAGCAAA+AGG + Chr6:20129807-20129826 MsG0680031415.01.T01:intron 50.0%
GGCCGTAGTAAAAGCCAGTT+TGG - Chr6:20130360-20130379 None:intergenic 50.0%
GGCTGAAAGAATTGGGAGGT+AGG + Chr6:20129793-20129812 MsG0680031415.01.T01:intron 50.0%
TCCCTGTTGTTGAGAGCTTC+CGG + Chr6:20130417-20130436 MsG0680031415.01.T01:CDS 50.0%
TCCGGAAGCTCTCAACAACA+GGG - Chr6:20130421-20130440 None:intergenic 50.0%
TGCCCCTGGCAAAATGTCAT+AGG - Chr6:20130105-20130124 None:intergenic 50.0%
TGGTGGCTGAAAGAATTGGG+AGG + Chr6:20129789-20129808 MsG0680031415.01.T01:intron 50.0%
TTGCACCTGGCAAATTTGCC+AGG + Chr6:20130134-20130153 MsG0680031415.01.T01:CDS 50.0%
TTGCTCCTGGCATTATTCCC+TGG + Chr6:20130162-20130181 MsG0680031415.01.T01:CDS 50.0%
TTTCAATGGTGGCTGTGGTG+TGG + Chr6:20129740-20129759 MsG0680031415.01.T01:intron 50.0%
! ACCACCTTTTCGTGAACCAG+GGG - Chr6:20130072-20130091 None:intergenic 50.0%
! GACCACCTTTTCGTGAACCA+GGG - Chr6:20130073-20130092 None:intergenic 50.0%
! GCAGCAGGGAGAAGAGTATA+AGG + Chr6:20129846-20129865 MsG0680031415.01.T01:intron 50.0%
!! GAGGAAGAAGATGGTGGGTT+TGG + Chr6:20129598-20129617 MsG0680031415.01.T01:intron 50.0%
!! GGTAGTTTTTGAAGAGGGGG+AGG + Chr6:20129711-20129730 MsG0680031415.01.T01:intron 50.0%
!! TTTTGAAGAGGGGGAGGAGA+GGG + Chr6:20129717-20129736 MsG0680031415.01.T01:intron 50.0%
!! TTTTTGAAGAGGGGGAGGAG+AGG + Chr6:20129716-20129735 MsG0680031415.01.T01:intron 50.0%
ACCCCTGGTTCACGAAAAGG+TGG + Chr6:20130068-20130087 MsG0680031415.01.T01:CDS 55.0%
ACGGGGGAACAGGAAAATGC+AGG - Chr6:20129990-20130009 None:intergenic 55.0%
AGAAGAAGTCGCAAGGCAGC+AGG + Chr6:20129831-20129850 MsG0680031415.01.T01:intron 55.0%
ATGCCAGGAGCAAGAACTCC+TGG - Chr6:20130155-20130174 None:intergenic 55.0%
ATTTGTGAGGGGCTTACCCC+TGG + Chr6:20130053-20130072 MsG0680031415.01.T01:CDS 55.0%
CTCCGGAAGCTCTCAACAAC+AGG - Chr6:20130422-20130441 None:intergenic 55.0%
GAAGAAGTCGCAAGGCAGCA+GGG + Chr6:20129832-20129851 MsG0680031415.01.T01:intron 55.0%
GAGGGTTTCAATGGTGGCTG+TGG + Chr6:20129735-20129754 MsG0680031415.01.T01:intron 55.0%
GCAGAATGCGAGTCTCTTGC+AGG + Chr6:20131339-20131358 MsG0680031415.01.T01:CDS 55.0%
GGAGGAGAGGGTTTCAATGG+TGG + Chr6:20129729-20129748 MsG0680031415.01.T01:intron 55.0%
GGTCCACCGCTTGGAAAGAA+TGG - Chr6:20130381-20130400 None:intergenic 55.0%
TTGCCAGGAGTTCTTGCTCC+TGG + Chr6:20130149-20130168 MsG0680031415.01.T01:CDS 55.0%
! GGACCACCTTTTCGTGAACC+AGG - Chr6:20130074-20130093 None:intergenic 55.0%
!! ATGGGTTGGTCGGTTGGAAG+AGG - Chr6:20130470-20130489 None:intergenic 55.0%
ATTTCCGGCACGGTGGTTGC+GGG + Chr6:20129523-20129542 MsG0680031415.01.T01:CDS 60.0%
CAATGGTGGCTGTGGTGTGG+TGG + Chr6:20129743-20129762 MsG0680031415.01.T01:intron 60.0%
CGGCCATTCTTTCCAAGCGG+TGG + Chr6:20130375-20130394 MsG0680031415.01.T01:CDS 60.0%
GAAGCTTGGGACAATGGCGG+AGG - Chr6:20130990-20131009 None:intergenic 60.0%
GACGCGGTGGCAGTGATTTC+CGG + Chr6:20129508-20129527 MsG0680031415.01.T01:CDS 60.0%
GATTTCCGGCACGGTGGTTG+CGG + Chr6:20129522-20129541 MsG0680031415.01.T01:CDS 60.0%
GGAAATCACTGCCACCGCGT+CGG - Chr6:20129509-20129528 None:intergenic 60.0%
GGGGGAGGAGAGGGTTTCAA+TGG + Chr6:20129726-20129745 MsG0680031415.01.T01:intron 60.0%
GGTCGGTTGGAAGAGGAGAG+AGG - Chr6:20130463-20130482 None:intergenic 60.0%
GGTGGCAGTGATTTCCGGCA+CGG + Chr6:20129513-20129532 MsG0680031415.01.T01:CDS 60.0%
!!! CATTTTGCCAGGGGCATCCC+TGG + Chr6:20130109-20130128 MsG0680031415.01.T01:CDS 60.0%
GCAGAGTGAGGTCCACCGCT+TGG - Chr6:20130390-20130409 None:intergenic 65.0%
GGCAGTGATTTCCGGCACGG+TGG + Chr6:20129516-20129535 MsG0680031415.01.T01:CDS 65.0%
GGCATCCCTGGCATTGCACC+TGG + Chr6:20130121-20130140 MsG0680031415.01.T01:CDS 65.0%
TGCAATGCCAGGGATGCCCC+TGG - Chr6:20130119-20130138 None:intergenic 65.0%
TTCACCCGCAACCACCGTGC+CGG - Chr6:20129530-20129549 None:intergenic 65.0%
! GGCTGTGGTGTGGTGGAAGG+AGG + Chr6:20129750-20129769 MsG0680031415.01.T01:intron 65.0%
! GGTGGCTGTGGTGTGGTGGA+AGG + Chr6:20129747-20129766 MsG0680031415.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 20129487 20131471 20129487 ID=MsG0680031415.01;Name=MsG0680031415.01
Chr6 mRNA 20129487 20131471 20129487 ID=MsG0680031415.01.T01;Parent=MsG0680031415.01;Name=MsG0680031415.01.T01;_AED=0.40;_eAED=0.40;_QI=0|0|0|0.75|1|1|4|0|395
Chr6 exon 20129487 20129553 20129487 ID=MsG0680031415.01.T01:exon:13136;Parent=MsG0680031415.01.T01
Chr6 exon 20130042 20130454 20130042 ID=MsG0680031415.01.T01:exon:13137;Parent=MsG0680031415.01.T01
Chr6 exon 20130592 20131029 20130592 ID=MsG0680031415.01.T01:exon:13138;Parent=MsG0680031415.01.T01
Chr6 exon 20131202 20131471 20131202 ID=MsG0680031415.01.T01:exon:13139;Parent=MsG0680031415.01.T01
Chr6 CDS 20129487 20129553 20129487 ID=MsG0680031415.01.T01:cds;Parent=MsG0680031415.01.T01
Chr6 CDS 20130042 20130454 20130042 ID=MsG0680031415.01.T01:cds;Parent=MsG0680031415.01.T01
Chr6 CDS 20130592 20131029 20130592 ID=MsG0680031415.01.T01:cds;Parent=MsG0680031415.01.T01
Chr6 CDS 20131202 20131471 20131202 ID=MsG0680031415.01.T01:cds;Parent=MsG0680031415.01.T01
Gene Sequence

>MsG0680031415.01.T01

ATGGCTGCAAATAATTTTTCCGACGCGGTGGCAGTGATTTCCGGCACGGTGGTTGCGGGTGAAAGTAGGGTTATTGAAATTTGTGAGGGGCTTACCCCTGGTTCACGAAAAGGTGGTCCCGTATTTTCCTATGACATTTTGCCAGGGGCATCCCTGGCATTGCACCTGGCAAATTTGCCAGGAGTTCTTGCTCCTGGCATTATTCCCTGGCAATATGCAACATTTCTTGTAGTGAATAGGGTTCATTCAACTTCTTCTTCTTCTACGGTTCAGGTTAATTGTTACTCACAGGAGGCACTCTACAATTGTGAAAACAATTTGGTCGATAGAATTAGTGATTTACCAGATGAGTTATTGCTTTACATTCTCTCTTTTCTCCAAACCAAACTGGCTTTTACTACGGCCATTCTTTCCAAGCGGTGGACCTCACTCTGCTATTCACTCCCTGTTGTTGAGAGCTTCCGGAGTTTTGTCAATAATGAAATTCATCTCAATTTGCCTTTCCACACCTTAAAGCATGTTATTTTCGTCTCGCAAACCCTTGTTGTTCTCAAACTTCAAAGTTTATATGTTGGAAAGGATACTTCGAGTGTTCATCTTCCATCACTCAAAACCCTAAATCTGACATCAGTTTCTTTTCAAAATCGGGATGATTACATAAATTTTCTCTATGCTTGTCCTATCCTAGAAGATTTGCATGCTGAAAATCGGGATGGTCTGTTTAATGGTATTAATAATGTCAAGTTTCTACCCGTAGATATGGAATGCACAAAAGTGGTATCTTTGAGAGCCATTCCACTCTTTCCAAACTTAATTTCCATCAAACTAGTGTTTCCTAGTTATTCACATATTTGTTGGGATGGTCTAGTAGAACTCCTCCGCCATTGTCCCAAGCTTCAAATTCTTTTCATTAAAAAGTGGAGGTTTACCATCTTATCCGAGGAATGGAAATACCCAATTTCGGTTCTTGAATGTGTTTCATCTCACCTCAGATCATGTACTATTTTAAACTTACAAGGCTCGGAAAATGATCTTCGGTTTACAAAATATATTTTGCAGAATGCGAGTCTCTTGCAGGACATGAAAATCAGCATTACTACTAGAAGAACTTGGAAAAAAAGTTGGATTCAAGAAGTATTGTTCTGCTGCCCAAGGAAATCTTTAGGATGTAAACTTTCATTTGAATGA
Protein sequence

>MsG0680031415.01.T01

MAANNFSDAVAVISGTVVAGESRVIEICEGLTPGSRKGGPVFSYDILPGASLALHLANLPGVLAPGIIPWQYATFLVVNRVHSTSSSSTVQVNCYSQEALYNCENNLVDRISDLPDELLLYILSFLQTKLAFTTAILSKRWTSLCYSLPVVESFRSFVNNEIHLNLPFHTLKHVIFVSQTLVVLKLQSLYVGKDTSSVHLPSLKTLNLTSVSFQNRDDYINFLYACPILEDLHAENRDGLFNGINNVKFLPVDMECTKVVSLRAIPLFPNLISIKLVFPSYSHICWDGLVELLRHCPKLQILFIKKWRFTILSEEWKYPISVLECVSSHLRSCTILNLQGSENDLRFTKYILQNASLLQDMKISITTRRTWKKSWIQEVLFCCPRKSLGCKLSFE*