AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010541.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010541.01.T01 MTR_6g044560 66.976 539 121 3 1 539 84 565 0.0 681
MsG0280010541.01.T01 MTR_6g044572 73.737 396 97 1 144 539 1 389 0.0 569
MsG0280010541.01.T01 MTR_1g085120 50.474 422 141 11 145 539 92 472 1.94e-116 353
MsG0280010541.01.T01 MTR_1g085120 50.474 422 141 11 145 539 167 547 1.10e-115 353
MsG0280010541.01.T01 MTR_6g022500 48.578 422 149 10 143 539 99 477 1.36e-112 343
MsG0280010541.01.T01 MTR_4g039440 45.964 446 165 13 125 541 17 415 2.21e-102 315
MsG0280010541.01.T01 MTR_7g055943 47.406 424 159 10 144 541 39 424 7.61e-102 314
MsG0280010541.01.T01 MTR_1089s0010 44.096 415 170 8 144 538 7 379 6.35e-101 310
MsG0280010541.01.T01 MTR_6g011460 48.598 428 156 11 137 541 38 424 1.18e-100 310
MsG0280010541.01.T01 MTR_1g066830 43.396 424 170 8 142 537 5 386 1.67e-91 286
MsG0280010541.01.T01 MTR_6g040270 42.718 412 176 7 147 538 10 381 8.66e-91 283
MsG0280010541.01.T01 MTR_5g058100 43.124 429 172 11 138 539 2 385 1.61e-89 280
MsG0280010541.01.T01 MTR_5g058000 45.278 413 166 11 144 539 7 376 4.97e-87 274
MsG0280010541.01.T01 MTR_6g022360 42.344 418 167 10 143 537 41 407 9.93e-86 271
MsG0280010541.01.T01 MTR_1g085120 49.530 319 105 8 145 436 179 468 5.15e-81 261
MsG0280010541.01.T01 MTR_5g073420 42.755 421 169 13 142 538 8 380 6.58e-81 258
MsG0280010541.01.T01 MTR_6g022520 51.987 302 105 7 268 542 29 317 4.31e-77 246
MsG0280010541.01.T01 MTR_7g026500 33.882 425 205 14 145 537 14 394 1.21e-58 200
MsG0280010541.01.T01 MTR_1g108820 35.092 436 182 13 144 536 7 384 3.50e-56 193
MsG0280010541.01.T01 MTR_3g095600 36.896 393 138 14 144 529 3 292 4.30e-54 185
MsG0280010541.01.T01 MTR_6g045333 33.553 456 229 14 115 537 31 445 7.18e-54 189
MsG0280010541.01.T01 MTR_5g061680 36.827 353 165 10 139 484 5 306 4.94e-53 183
MsG0280010541.01.T01 MTR_3g071850 32.084 427 210 13 144 534 23 405 2.50e-47 177
MsG0280010541.01.T01 MTR_5g045170 32.944 428 215 16 137 536 6 389 1.49e-46 168
MsG0280010541.01.T01 MTR_1g041245 32.558 430 216 17 137 538 3 386 2.62e-45 164
MsG0280010541.01.T01 MTR_5g007410 30.676 414 216 9 147 530 28 400 5.01e-45 165
MsG0280010541.01.T01 MTR_0009s0080 33.168 404 207 11 147 524 20 386 1.68e-43 160
MsG0280010541.01.T01 MTR_2g036470 32.289 415 222 9 145 535 14 393 9.65e-43 157
MsG0280010541.01.T01 MTR_7g032380 32.850 414 206 14 137 538 3 356 1.39e-42 156
MsG0280010541.01.T01 MTR_5g073370 31.132 424 216 13 145 539 5 381 3.19e-42 155
MsG0280010541.01.T01 MTR_7g056433 31.944 432 219 16 135 538 5 389 2.10e-41 154
MsG0280010541.01.T01 MTR_2g005990 32.558 430 212 15 144 536 5 393 5.65e-41 152
MsG0280010541.01.T01 MTR_5g039490 32.464 422 216 15 134 540 11 378 6.31e-41 152
MsG0280010541.01.T01 MTR_5g031970 32.178 404 211 13 137 535 8 353 6.32e-40 149
MsG0280010541.01.T01 MTR_7g088260 31.925 426 204 16 145 538 91 462 4.63e-39 149
MsG0280010541.01.T01 MTR_2g007450 30.631 444 217 14 144 536 15 418 8.53e-39 147
MsG0280010541.01.T01 MTR_3g099830 30.516 426 211 13 138 536 5 372 1.80e-38 145
MsG0280010541.01.T01 MTR_5g045510 31.991 422 222 15 136 541 3 375 5.52e-38 144
MsG0280010541.01.T01 MTR_2g007400 30.716 433 226 14 140 536 7 401 2.77e-37 142
MsG0280010541.01.T01 MTR_3g095640 45.503 189 74 7 138 322 12 175 9.08e-36 132
MsG0280010541.01.T01 MTR_7g033990 32.367 414 219 16 137 530 3 375 9.14e-36 139
MsG0280010541.01.T01 MTR_7g098510 32.471 425 207 16 144 538 17 391 1.02e-35 138
MsG0280010541.01.T01 MTR_5g008950 28.814 413 227 10 147 539 1 366 1.09e-35 137
MsG0280010541.01.T01 MTR_5g039450 30.047 426 193 15 142 535 3 355 1.89e-35 136
MsG0280010541.01.T01 MTR_1g108820 33.033 333 142 9 144 436 7 298 3.67e-35 135
MsG0280010541.01.T01 MTR_7g075820 29.330 433 219 13 145 536 6 392 1.09e-34 135
MsG0280010541.01.T01 MTR_5g033200 48.555 173 59 4 377 529 11 173 4.74e-34 127
MsG0280010541.01.T01 MTR_5g008920 30.093 432 217 16 137 539 7 382 5.28e-34 133
MsG0280010541.01.T01 MTR_5g083890 29.748 437 231 14 145 540 6 407 1.15e-33 134
MsG0280010541.01.T01 MTR_7g007080 31.894 417 216 16 145 536 4 377 1.67e-33 132
MsG0280010541.01.T01 MTR_7g033915 30.144 418 219 16 137 537 3 364 2.82e-33 130
MsG0280010541.01.T01 MTR_7g098480 30.588 425 211 14 144 537 17 388 4.05e-33 132
MsG0280010541.01.T01 MTR_3g105060 27.791 421 226 11 140 538 9 373 2.05e-32 128
MsG0280010541.01.T01 MTR_5g065100 30.846 402 204 16 147 537 10 348 2.28e-32 129
MsG0280010541.01.T01 MTR_3g107100 30.607 428 223 16 145 538 11 398 2.55e-32 129
MsG0280010541.01.T01 MTR_0543s0010 29.343 426 216 12 140 537 81 449 4.59e-32 129
MsG0280010541.01.T01 MTR_5g039470 29.810 369 186 9 161 498 1 327 5.98e-32 125
MsG0280010541.01.T01 MTR_3g467400 29.953 424 212 16 143 538 1 367 6.44e-32 127
MsG0280010541.01.T01 MTR_3g108560 30.189 424 210 14 145 537 20 388 6.70e-32 127
MsG0280010541.01.T01 MTR_3g087260 29.677 465 235 18 145 537 12 456 7.91e-32 128
MsG0280010541.01.T01 MTR_5g076150 39.823 226 84 6 281 464 11 226 1.10e-31 122
MsG0280010541.01.T01 MTR_1g108800 38.545 275 117 10 291 536 89 340 1.37e-31 125
MsG0280010541.01.T01 MTR_1g108800 52.564 78 27 3 144 212 7 83 2.45e-13 71.6
MsG0280010541.01.T01 MTR_7g115270 29.604 429 237 14 138 535 5 399 3.96e-31 125
MsG0280010541.01.T01 MTR_5g063950 27.561 410 210 13 150 535 13 359 4.09e-31 124
MsG0280010541.01.T01 MTR_3g023630 29.056 413 230 12 141 535 4 371 2.77e-30 122
MsG0280010541.01.T01 MTR_8g085430 29.695 394 179 15 144 526 10 316 3.92e-30 120
MsG0280010541.01.T01 MTR_3g108150 28.241 432 231 14 136 537 4 386 7.20e-30 121
MsG0280010541.01.T01 MTR_1g107385 28.472 432 239 13 139 536 26 421 7.43e-30 122
MsG0280010541.01.T01 MTR_1g053025 30.233 430 218 18 144 535 1 386 1.03e-29 120
MsG0280010541.01.T01 MTR_7g098570 29.017 417 222 14 144 533 19 388 2.46e-29 121
MsG0280010541.01.T01 MTR_6g033095 37.383 214 86 5 304 517 32 197 2.63e-29 115
MsG0280010541.01.T01 MTR_2g008310 28.169 426 220 13 144 538 1 371 3.88e-29 119
MsG0280010541.01.T01 MTR_3g036250 28.467 411 224 14 144 535 4 363 4.47e-29 118
MsG0280010541.01.T01 MTR_4g098590 29.367 395 199 14 147 502 1 354 4.64e-29 119
MsG0280010541.01.T01 MTR_3g082890 29.519 437 216 17 145 538 97 484 8.69e-29 119
MsG0280010541.01.T01 MTR_0492s0020 29.156 391 195 11 140 502 81 417 1.14e-28 119
MsG0280010541.01.T01 MTR_2g008320 28.406 433 224 15 140 538 47 427 1.87e-28 118
MsG0280010541.01.T01 MTR_7g114710 29.257 417 223 16 137 538 5 364 2.96e-28 116
MsG0280010541.01.T01 MTR_7g034115 29.078 423 213 15 137 526 3 371 6.06e-28 115
MsG0280010541.01.T01 MTR_7g007340 28.401 419 205 14 136 531 4 350 6.66e-28 115
MsG0280010541.01.T01 MTR_7g032370 28.608 395 219 12 160 538 5 352 3.71e-27 112
MsG0280010541.01.T01 MTR_1377s0010 48.819 127 55 4 388 513 21 138 5.13e-27 106
MsG0280010541.01.T01 MTR_3g107160 26.777 422 233 12 145 538 10 383 5.22e-27 113
MsG0280010541.01.T01 MTR_6g022390 42.945 163 56 4 141 295 1 134 6.71e-27 106
MsG0280010541.01.T01 MTR_5g073340 30.000 360 156 13 142 469 5 300 7.85e-26 108
MsG0280010541.01.T01 MTR_7g056430 27.381 420 212 16 140 531 4 358 8.60e-26 112
MsG0280010541.01.T01 MTR_7g056420 27.381 420 212 16 140 531 4 358 9.17e-26 112
MsG0280010541.01.T01 MTR_7g056277 30.238 420 217 18 145 538 259 628 1.62e-25 111
MsG0280010541.01.T01 MTR_7g056287 29.787 423 215 18 145 538 3 372 3.10e-25 107
MsG0280010541.01.T01 MTR_3g040700 28.307 378 207 14 137 495 35 367 3.57e-25 108
MsG0280010541.01.T01 MTR_7g083740 27.273 418 215 12 143 537 15 366 8.68e-25 106
MsG0280010541.01.T01 MTR_3g109982 28.270 474 236 18 145 531 13 469 1.31e-24 108
MsG0280010541.01.T01 MTR_3g082890 27.932 469 219 16 145 538 17 441 1.36e-24 107
MsG0280010541.01.T01 MTR_3g095630 39.326 178 74 6 375 531 14 178 2.38e-24 100
MsG0280010541.01.T01 MTR_2g007500 26.649 379 190 10 140 482 9 335 3.50e-24 103
MsG0280010541.01.T01 MTR_3g107120 27.885 416 239 15 145 535 9 388 3.41e-23 102
MsG0280010541.01.T01 MTR_5g054920 35.859 198 97 7 344 522 7 193 5.70e-23 97.1
MsG0280010541.01.T01 MTR_7g034110 29.006 362 181 13 137 486 3 300 1.16e-22 99.8
MsG0280010541.01.T01 MTR_7g056020 26.977 430 195 14 145 532 16 368 7.75e-22 99.8
MsG0280010541.01.T01 MTR_3g108560 30.960 323 147 11 145 436 20 297 9.85e-22 96.7
MsG0280010541.01.T01 MTR_3g026920 26.889 450 214 17 140 535 14 402 2.65e-21 96.7
MsG0280010541.01.T01 MTR_0571s0010 52.500 80 37 1 140 219 27 105 3.52e-21 89.4
MsG0280010541.01.T01 MTR_6g022410 56.471 85 32 2 454 538 28 107 4.12e-21 89.0
MsG0280010541.01.T01 MTR_7g021990 26.984 441 243 16 141 528 1 415 1.24e-19 92.0
MsG0280010541.01.T01 MTR_7g060470 26.698 427 242 13 145 537 3 392 1.47e-19 91.3
MsG0280010541.01.T01 MTR_7g021950 26.984 441 243 16 141 528 1 415 1.56e-19 92.0
MsG0280010541.01.T01 MTR_8g077460 26.603 421 227 17 145 538 10 375 5.39e-19 89.4
MsG0280010541.01.T01 MTR_2g007090 34.211 228 124 7 317 537 85 293 1.24e-18 87.0
MsG0280010541.01.T01 MTR_3g110010 35.849 212 98 6 145 353 13 189 1.45e-18 89.7
MsG0280010541.01.T01 MTR_7g034090 28.070 399 192 15 145 538 4 312 2.18e-18 88.2
MsG0280010541.01.T01 MTR_5g024060 38.095 147 75 4 387 531 69 201 9.25e-18 83.6
MsG0280010541.01.T01 MTR_5g058350 45.455 99 51 1 260 355 66 164 1.03e-17 81.6
MsG0280010541.01.T01 MTR_5g058350 70.833 48 14 0 142 189 5 52 2.90e-12 65.9
MsG0280010541.01.T01 MTR_2g007530 28.500 400 203 16 140 535 14 334 1.37e-17 84.7
MsG0280010541.01.T01 MTR_7g056447 34.123 211 101 8 145 351 9 185 4.47e-17 82.4
MsG0280010541.01.T01 MTR_7g022105 26.014 419 226 13 141 502 2 393 9.55e-17 83.2
MsG0280010541.01.T01 MTR_7g034120 28.247 308 167 14 264 539 24 309 1.30e-16 81.3
MsG0280010541.01.T01 MTR_6g016250 47.664 107 40 3 1 98 71 170 3.20e-16 77.0
MsG0280010541.01.T01 MTR_5g061410 27.244 312 148 10 150 436 10 267 6.48e-16 78.6
MsG0280010541.01.T01 MTR_3g114200 32.759 174 80 5 145 314 19 159 6.62e-16 75.9
MsG0280010541.01.T01 MTR_2g007360 31.164 292 150 12 288 542 98 375 3.05e-15 77.8
MsG0280010541.01.T01 MTR_4g134150 29.615 260 125 10 134 390 9 213 3.73e-15 75.5
MsG0280010541.01.T01 MTR_7g033945 31.707 205 96 8 137 331 3 173 2.33e-14 72.0
MsG0280010541.01.T01 MTR_4g056040 31.466 232 123 8 145 355 9 225 1.09e-13 73.9
MsG0280010541.01.T01 MTR_1g038710 33.636 220 104 11 145 353 19 207 1.34e-13 73.6
MsG0280010541.01.T01 MTR_8g062310 28.261 230 116 8 144 365 24 212 2.03e-13 72.8
MsG0280010541.01.T01 MTR_7g056280 30.198 202 105 8 147 342 8 179 2.49e-13 73.2
MsG0280010541.01.T01 MTR_4g055990 31.169 231 128 11 145 353 9 230 2.99e-13 72.4
MsG0280010541.01.T01 MTR_7g081290 43.956 91 48 1 141 231 14 101 4.11e-13 70.1
MsG0280010541.01.T01 MTR_4g055990 31.169 231 128 11 145 353 9 230 5.62e-13 71.6
MsG0280010541.01.T01 MTR_1g095750 38.000 100 55 2 140 236 41 136 5.68e-13 67.0
MsG0280010541.01.T01 MTR_8g062270 30.594 219 124 6 144 355 15 212 1.73e-12 70.1
MsG0280010541.01.T01 MTR_7g033940 44.037 109 56 3 144 249 93 199 1.85e-12 67.4
MsG0280010541.01.T01 MTR_3g071790 36.111 108 61 3 391 496 101 202 2.51e-12 66.6
MsG0280010541.01.T01 MTR_8g058970 27.857 280 152 10 144 399 18 271 3.23e-12 69.3
MsG0280010541.01.T01 MTR_4g055580 31.489 235 122 11 145 353 100 321 4.86e-12 68.9
MsG0280010541.01.T01 MTR_5g080710 33.486 218 101 8 144 353 32 213 5.54e-12 68.6
MsG0280010541.01.T01 MTR_7g007370 30.942 223 133 5 296 501 98 316 9.79e-12 67.0
MsG0280010541.01.T01 MTR_4g056020 30.180 222 105 8 145 353 9 193 9.91e-12 67.8
MsG0280010541.01.T01 MTR_6g061720 50.000 64 31 1 150 212 13 76 1.46e-11 60.8
MsG0280010541.01.T01 MTR_5g044790 36.806 144 56 6 419 535 302 437 2.32e-11 66.2
MsG0280010541.01.T01 MTR_1g059860 27.208 283 142 11 268 495 38 311 3.11e-11 65.1
MsG0280010541.01.T01 MTR_7g098590 44.186 86 40 3 144 228 17 95 3.37e-11 61.6
MsG0280010541.01.T01 MTR_8g058965 27.731 238 121 9 138 353 6 214 3.80e-11 65.9
MsG0280010541.01.T01 MTR_8g467800 29.358 218 123 7 145 359 20 209 3.90e-11 65.1
MsG0280010541.01.T01 MTR_6g024140 42.353 85 29 1 2 86 85 149 4.19e-11 63.2
MsG0280010541.01.T01 MTR_8g468810 29.148 223 116 8 145 355 25 217 5.33e-11 64.3
MsG0280010541.01.T01 MTR_8g468810 29.148 223 116 8 145 355 25 217 6.41e-11 64.3
MsG0280010541.01.T01 MTR_8g070950 28.947 228 102 9 145 355 15 199 7.19e-11 64.7
MsG0280010541.01.T01 MTR_8g467800 27.397 219 126 5 145 359 20 209 7.69e-11 64.7
MsG0280010541.01.T01 MTR_8g468810 29.148 223 116 8 145 355 25 217 8.18e-11 64.3
MsG0280010541.01.T01 MTR_5g082930 35.227 88 56 1 147 233 17 104 9.23e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010541.01.T01 AT4G26340 24.026 462 241 11 144 538 1 419 1.06e-21 98.2
MsG0280010541.01.T01 AT5G56420 25.486 463 230 17 145 538 6 422 4.27e-21 96.3
MsG0280010541.01.T01 AT5G56420 25.486 463 230 17 145 538 6 422 4.27e-21 96.3
MsG0280010541.01.T01 AT5G56420 25.486 463 230 17 145 538 6 422 4.27e-21 96.3
MsG0280010541.01.T01 AT3G49030 26.096 456 238 15 145 537 21 440 4.12e-20 93.6
MsG0280010541.01.T01 AT4G15060 30.830 253 125 7 144 388 25 235 2.18e-18 88.2
MsG0280010541.01.T01 AT3G52680 24.664 446 265 14 145 539 21 446 3.28e-18 87.8
MsG0280010541.01.T01 AT5G56440 25.690 471 231 14 144 537 1 429 3.55e-18 87.4
MsG0280010541.01.T01 AT3G50710 33.028 218 105 5 144 353 1 185 3.77e-18 87.4
MsG0280010541.01.T01 AT4G15060 30.830 253 125 7 144 388 171 381 5.39e-18 87.8
MsG0280010541.01.T01 AT5G53635 28.899 218 116 6 147 359 2 185 1.28e-17 85.9
MsG0280010541.01.T01 AT5G56820 26.471 442 259 16 139 538 9 426 3.56e-17 84.3
MsG0280010541.01.T01 AT5G41840 30.488 246 115 9 145 368 14 225 1.27e-16 83.2
MsG0280010541.01.T01 AT3G49030 25.517 435 241 13 145 537 21 414 3.41e-16 81.3
MsG0280010541.01.T01 AT5G22700 32.110 218 108 6 145 358 43 224 4.36e-16 81.3
MsG0280010541.01.T01 AT5G22700 32.110 218 108 6 145 358 6 187 4.83e-16 80.9
MsG0280010541.01.T01 AT5G22700 32.110 218 108 6 145 358 6 187 4.83e-16 80.9
MsG0280010541.01.T01 AT5G22700 32.110 218 108 6 145 358 6 187 4.83e-16 80.9
MsG0280010541.01.T01 AT5G22700 32.110 218 108 6 145 358 6 187 4.83e-16 80.9
MsG0280010541.01.T01 AT3G62440 31.290 310 170 13 144 435 1 285 4.99e-16 81.3
MsG0280010541.01.T01 AT1G55030 24.406 463 236 14 142 537 16 431 5.19e-16 80.9
MsG0280010541.01.T01 AT5G22700 32.110 218 108 6 145 358 43 224 6.18e-16 80.9
MsG0280010541.01.T01 AT5G56690 28.507 221 111 5 147 355 4 189 6.44e-16 80.5
MsG0280010541.01.T01 AT1G55030 24.406 463 236 14 142 537 6 421 6.90e-16 80.5
MsG0280010541.01.T01 AT3G26930 26.754 456 249 17 140 538 16 443 5.88e-15 77.8
MsG0280010541.01.T01 AT3G58860 30.216 278 133 11 144 406 6 237 1.16e-14 77.0
MsG0280010541.01.T01 AT3G60040 29.961 257 151 8 111 355 193 432 2.49e-14 76.3
MsG0280010541.01.T01 AT3G60040 29.961 257 151 8 111 355 193 432 2.76e-14 76.6
MsG0280010541.01.T01 AT3G60040 31.250 224 130 7 139 355 7 213 5.89e-14 75.1
MsG0280010541.01.T01 AT5G22610 26.141 241 132 7 139 368 12 217 7.74e-14 74.3
MsG0280010541.01.T01 AT3G60040 31.250 224 130 7 139 355 227 433 1.05e-13 74.7
MsG0280010541.01.T01 AT3G60040 31.250 224 130 7 139 355 224 430 1.23e-13 74.3
MsG0280010541.01.T01 AT5G38570 28.605 430 216 20 144 537 1 375 2.02e-13 72.4
MsG0280010541.01.T01 AT1G16930 30.415 217 109 7 145 355 15 195 2.59e-13 72.8
MsG0280010541.01.T01 AT1G16930 30.415 217 109 7 145 355 15 195 2.59e-13 72.8
MsG0280010541.01.T01 AT1G16930 30.415 217 109 7 145 355 15 195 2.59e-13 72.8
MsG0280010541.01.T01 AT5G22610 26.407 231 124 7 139 358 12 207 2.93e-13 72.8
MsG0280010541.01.T01 AT1G78730 27.232 224 114 6 137 360 14 188 3.96e-13 72.0
MsG0280010541.01.T01 AT4G14103 27.536 276 146 10 145 408 8 241 6.96e-13 70.9
MsG0280010541.01.T01 AT4G14103 27.536 276 146 10 145 408 8 241 6.96e-13 70.9
MsG0280010541.01.T01 AT5G22720 28.636 220 117 5 140 353 18 203 9.25e-13 70.9
MsG0280010541.01.T01 AT3G49020 24.464 466 238 12 145 538 22 445 1.36e-12 70.5
MsG0280010541.01.T01 AT1G55660 28.968 252 134 9 143 388 51 263 1.39e-12 69.7
MsG0280010541.01.T01 AT4G14103 27.536 276 146 10 145 408 8 241 1.45e-12 70.1
MsG0280010541.01.T01 AT1G55660 28.968 252 134 9 143 388 51 263 1.51e-12 70.5
MsG0280010541.01.T01 AT5G27750 31.674 221 122 9 145 360 5 201 3.21e-12 69.3
MsG0280010541.01.T01 AT5G27750 31.674 221 122 9 145 360 5 201 3.48e-12 68.6
MsG0280010541.01.T01 AT4G14096 28.727 275 142 11 145 408 8 239 3.51e-12 69.3
MsG0280010541.01.T01 AT4G14096 28.727 275 142 11 145 408 8 239 3.51e-12 69.3
MsG0280010541.01.T01 AT5G56560 30.876 217 109 7 146 357 6 186 4.49e-12 68.6
MsG0280010541.01.T01 AT2G26030 29.596 223 111 8 145 358 4 189 6.63e-12 68.2
MsG0280010541.01.T01 AT2G26030 29.596 223 111 8 145 358 4 189 6.63e-12 68.2
MsG0280010541.01.T01 AT2G26030 29.596 223 111 8 145 358 4 189 6.97e-12 68.2
MsG0280010541.01.T01 AT1G19070 40.964 83 45 1 144 226 1 79 8.32e-12 61.6
MsG0280010541.01.T01 AT3G42770 30.455 220 107 8 150 355 4 191 1.46e-11 67.4
MsG0280010541.01.T01 AT4G26350 28.959 221 110 8 144 355 1 183 2.05e-11 66.6
MsG0280010541.01.T01 AT2G29930 29.091 220 106 8 145 354 12 191 2.57e-11 66.2
MsG0280010541.01.T01 AT2G29930 29.091 220 106 8 145 354 12 191 2.57e-11 66.2
MsG0280010541.01.T01 AT1G66310 29.524 210 117 7 144 353 18 196 4.83e-11 65.5
MsG0280010541.01.T01 AT3G58920 28.139 231 118 9 144 358 1 199 4.94e-11 65.5

Find 113 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCAACCTGTTTCAAATTT+AGG 0.090203 2:+71222870 None:intergenic
TCTCAAACTTTCGACGTTAA+AGG 0.142000 2:-71222936 MsG0280010541.01.T01:CDS
TCCAACCTGTTTCAAATTTA+GGG 0.175715 2:+71222871 None:intergenic
CAGCCTGTTCCAACGATATT+TGG 0.181228 2:+71224842 None:intergenic
ACTTAATTCATATTAAATTA+AGG 0.211654 2:-71222643 MsG0280010541.01.T01:CDS
TCAAATTCTTTATGTTAAAA+AGG 0.218903 2:-71222561 MsG0280010541.01.T01:intron
ACACATTCAAGAACCGAAAA+TGG 0.226321 2:+71222372 None:intergenic
CCCTTCTAATAGAATGCTTT+TGG 0.227281 2:-71222217 MsG0280010541.01.T01:CDS
AGTCTAGCGTCGTGCGAGTC+TGG 0.242646 2:+71224931 None:intergenic
TCCAAAAGCATTCTATTAGA+AGG 0.256530 2:+71222216 None:intergenic
CCCTAACATGCAAATATTCT+AGG 0.265483 2:+71222801 None:intergenic
TTACATCCTGATGATATCTT+TGG 0.265507 2:+71222159 None:intergenic
ACCTAGAATATTTGCATGTT+AGG 0.277013 2:-71222802 MsG0280010541.01.T01:CDS
TGTTTCGGATATGAAAATAA+TGG 0.327688 2:+71222967 None:intergenic
TCTTGCGAGCAAACAGATTA+CGG 0.339749 2:+71223140 None:intergenic
ACATAAAGAATTTGAAGCTT+GGG 0.343892 2:+71222569 None:intergenic
AATTTAATATGAATTAAGTT+TGG 0.347314 2:+71222647 None:intergenic
TTTCCATTCCCCGGATGATA+TGG 0.353234 2:+71222398 None:intergenic
CCTAGAATATTTGCATGTTA+GGG 0.356970 2:-71222801 MsG0280010541.01.T01:CDS
GTTTCGGATATGAAAATAAT+GGG 0.363129 2:+71222968 None:intergenic
GAAATCCCTAAATTTGAAAC+AGG 0.370515 2:-71222876 MsG0280010541.01.T01:CDS
CTGACAATTCTAAGAACAAT+AGG 0.370719 2:+71222119 None:intergenic
TTAAGGTTCACGAGCAAATC+CGG 0.376337 2:-71224685 MsG0280010541.01.T01:intron
GAAATCGTTAATCATGGATT+AGG 0.382975 2:-71224254 MsG0280010541.01.T01:CDS
CGATATTTGGTAAGCTGGAT+TGG 0.385670 2:+71224855 None:intergenic
AACTTCAGACTATGAAGGTT+GGG 0.396060 2:-71222319 MsG0280010541.01.T01:CDS
TCCAACGATATTTGGTAAGC+TGG 0.396298 2:+71224850 None:intergenic
TTTGAGAATAGTTAGTGTTT+CGG 0.400419 2:+71222952 None:intergenic
TGTTAGGGGCATTGGTTGTA+TGG 0.401643 2:-71222786 MsG0280010541.01.T01:CDS
GGTTAAACTGTCGTCATTGT+TGG 0.404164 2:-71222622 MsG0280010541.01.T01:CDS
AGGGGTAACCTTGGCGCAAC+TGG 0.406763 2:-71223747 MsG0280010541.01.T01:CDS
TATTTGCATGTTAGGGGCAT+TGG 0.411897 2:-71222794 MsG0280010541.01.T01:CDS
ATCCTTGGTCCTTTCTAAGT+TGG 0.412639 2:-71222723 MsG0280010541.01.T01:CDS
GTCTAGCGTCGTGCGAGTCT+GGG 0.427932 2:+71224932 None:intergenic
AACATAAAGAATTTGAAGCT+TGG 0.429959 2:+71222568 None:intergenic
ACATCGTTGAAGTGGAGAAC+GGG 0.433043 2:+71223295 None:intergenic
TCCCTAAATTTGAAACAGGT+TGG 0.433445 2:-71222872 MsG0280010541.01.T01:CDS
TATGAAAATAATGGGCTTCA+AGG 0.436283 2:+71222976 None:intergenic
AAAGTTACAGAAGCGATCAT+AGG 0.436715 2:+71223252 None:intergenic
AAATTTAGGGATTTCAAAGA+TGG 0.438618 2:+71222884 None:intergenic
GGATTAGGTCAGCAATCAAA+AGG 0.448441 2:-71224239 MsG0280010541.01.T01:CDS
AAGGTCACGGGTTCAAGTCC+TGG 0.449453 2:-71223701 MsG0280010541.01.T01:CDS
AGGGTCTTCTTCTGCTAGAA+AGG 0.454562 2:-71224219 MsG0280010541.01.T01:intron
CGGACCATTCGTCCCTTCTC+AGG 0.454974 2:-71223455 MsG0280010541.01.T01:CDS
GTTAAACTGTCGTCATTGTT+GGG 0.456618 2:-71222621 MsG0280010541.01.T01:CDS
AAGCTGGATTGGAGGGATCC+TGG 0.459968 2:+71224866 None:intergenic
GACTTGAACCCGTGACCTTA+CGG 0.466281 2:+71223705 None:intergenic
ACATGCAAATATTCTAGGTT+AGG 0.468000 2:+71222806 None:intergenic
TTACCAAATATCGTTGGAAC+AGG 0.468438 2:-71224845 MsG0280010541.01.T01:CDS
CACATTCAAGAACCGAAAAT+GGG 0.477482 2:+71222373 None:intergenic
ATGCGACACAATAACTCATC+TGG 0.483382 2:+71223397 None:intergenic
GTCATGTGACCGTAAGGTCA+CGG 0.484873 2:-71223714 MsG0280010541.01.T01:CDS
AAACTTTCGACGTTAAAGGT+TGG 0.495744 2:-71222932 MsG0280010541.01.T01:CDS
AACAGGTTGGATTTAAAAGT+CGG 0.496510 2:-71222859 MsG0280010541.01.T01:CDS
TCTTGTCCAAAGATATCATC+AGG 0.499910 2:-71222165 MsG0280010541.01.T01:CDS
CATAAAGAATTTGAAGCTTG+GGG 0.503703 2:+71222570 None:intergenic
CATACGGAAATCGTTAATCA+TGG 0.504063 2:-71224260 MsG0280010541.01.T01:CDS
CCAAAAGCATTCTATTAGAA+GGG 0.506084 2:+71222217 None:intergenic
TAACTTCAGACTATGAAGGT+TGG 0.510666 2:-71222320 MsG0280010541.01.T01:CDS
AGACCATATCATCCGGGGAA+TGG 0.510703 2:-71222401 MsG0280010541.01.T01:CDS
ACGGGGAGTGAATAGAAGAG+TGG 0.516061 2:+71223313 None:intergenic
TGAAGTTAACATCGTTGAAG+TGG 0.525589 2:+71223287 None:intergenic
TAAGGTTCACGAGCAAATCC+GGG 0.528704 2:-71224684 MsG0280010541.01.T01:intron
CTAGCCCTGCGTTAATGTTG+TGG 0.529872 2:+71223110 None:intergenic
TATTTGGTAAGCTGGATTGG+AGG 0.531447 2:+71224858 None:intergenic
CAGGTGCCACAATGCTCTAT+CGG 0.531538 2:-71223475 MsG0280010541.01.T01:CDS
TTTGAAGCTTGGGGCAAAGT+CGG 0.532454 2:+71222579 None:intergenic
CGGGGAGTGAATAGAAGAGT+GGG 0.532935 2:+71223314 None:intergenic
TCAGGACTCAATAGCAGTTG+TGG 0.533400 2:-71223437 MsG0280010541.01.T01:CDS
TCTTTCTCGCGGGGAAGTTG+TGG 0.535047 2:+71223079 None:intergenic
CAGAAGACCACTGTGAATCC+CGG 0.537705 2:+71224666 None:intergenic
AAATGGGTATTTCCATTCCC+CGG 0.539364 2:+71222389 None:intergenic
AGGAATGGCTCTCACTATGC+AGG 0.540473 2:-71224965 None:intergenic
TAAGGTTCTTGAGAGACATA+CGG 0.546170 2:-71224276 MsG0280010541.01.T01:intron
ATTTGGTAAGCTGGATTGGA+GGG 0.546247 2:+71224859 None:intergenic
ACATTCTAACCAACTTAGAA+AGG 0.552189 2:+71222714 None:intergenic
TGATGATATCTTTGGACAAG+AGG 0.554098 2:+71222167 None:intergenic
TCATGTGACCGTAAGGTCAC+GGG 0.555340 2:-71223713 MsG0280010541.01.T01:CDS
CAACACTTCTTTCTAAGCGG+TGG 0.558135 2:-71223339 MsG0280010541.01.T01:CDS
CAAGTAGCGAGGGGTAACCT+TGG 0.558993 2:-71223756 MsG0280010541.01.T01:intron
CCATCCTCTTTCAATCAACC+AGG 0.563262 2:-71223212 MsG0280010541.01.T01:CDS
GTTGTTGTCATGTGACCGTA+AGG 0.564546 2:-71223720 MsG0280010541.01.T01:CDS
GTTGGAACAGGCTGATGCTA+AGG 0.565147 2:-71224833 MsG0280010541.01.T01:intron
TCCAGCTTACCAAATATCGT+TGG 0.568062 2:-71224851 MsG0280010541.01.T01:CDS
CCTGGTTGATTGAAAGAGGA+TGG 0.570672 2:+71223212 None:intergenic
GAGCAAACAGATTACGGCGG+TGG 0.576718 2:+71223146 None:intergenic
AACATCGTTGAAGTGGAGAA+CGG 0.578590 2:+71223294 None:intergenic
CAACTTTACCAGTTGCGCCA+AGG 0.585916 2:+71223739 None:intergenic
GGCGGTGGCGACGATAACAT+TGG 0.595517 2:+71223161 None:intergenic
GATTAGGTCAGCAATCAAAA+GGG 0.604189 2:-71224238 MsG0280010541.01.T01:CDS
AATGTGGATATCTTTCTCGC+GGG 0.604209 2:+71223069 None:intergenic
CTACAACACTTCTTTCTAAG+CGG 0.610021 2:-71223342 MsG0280010541.01.T01:CDS
CTAGCCATGTGTTGATAATG+TGG 0.614830 2:+71223053 None:intergenic
CTAGAATATTTGCATGTTAG+GGG 0.615670 2:-71222800 MsG0280010541.01.T01:CDS
TTGAAAGAGGATGGATCATG+AGG 0.616771 2:+71223221 None:intergenic
TAATGTGGATATCTTTCTCG+CGG 0.617845 2:+71223068 None:intergenic
TGAGCCTGGTTGATTGAAAG+AGG 0.618688 2:+71223208 None:intergenic
ACTGCTATTGAGTCCTGAGA+AGG 0.623973 2:+71223442 None:intergenic
GATATCCACAACATTAACGC+AGG 0.626075 2:-71223115 MsG0280010541.01.T01:CDS
CTGCTATTGAGTCCTGAGAA+GGG 0.631524 2:+71223443 None:intergenic
GAGTCCTGAGAAGGGACGAA+TGG 0.634223 2:+71223451 None:intergenic
CTTAATACAACGTCGTGTTG+AGG 0.636699 2:-71223026 MsG0280010541.01.T01:CDS
CATCGTTGAAGTGGAGAACG+GGG 0.647769 2:+71223296 None:intergenic
TCGTCATTGTTGGGATGATG+TGG 0.649988 2:-71222612 MsG0280010541.01.T01:CDS
AAAAGAGACCATATCATCCG+GGG 0.650927 2:-71222406 MsG0280010541.01.T01:CDS
ATATCCACAACATTAACGCA+GGG 0.657482 2:-71223114 MsG0280010541.01.T01:CDS
AACCAACTTAGAAAGGACCA+AGG 0.664155 2:+71222721 None:intergenic
ATGTGGATATCTTTCTCGCG+GGG 0.669280 2:+71223070 None:intergenic
ATATCCACATTATCAACACA+TGG 0.676298 2:-71223057 MsG0280010541.01.T01:CDS
AGCAAATCCGGGATTCACAG+TGG 0.704127 2:-71224673 MsG0280010541.01.T01:CDS
GGGGAGTGAATAGAAGAGTG+GGG 0.733844 2:+71223315 None:intergenic
TGCGAGCAAACAGATTACGG+CGG 0.739660 2:+71223143 None:intergenic
AATGGTCCGATAGAGCATTG+TGG 0.739743 2:+71223469 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATATGAATTAAGTT+TGG + Chr2:71224445-71224464 None:intergenic 10.0%
!! ACTTAATTCATATTAAATTA+AGG - Chr2:71224446-71224465 MsG0280010541.01.T01:intron 10.0%
!! TCAAATTCTTTATGTTAAAA+AGG - Chr2:71224528-71224547 MsG0280010541.01.T01:intron 15.0%
!!! TTATTCTTATACCTTTTTTA+AGG - Chr2:71222387-71222406 MsG0280010541.01.T01:CDS 15.0%
!! AAACTACAGCTAAAAAAAAA+AGG + Chr2:71223517-71223536 None:intergenic 20.0%
!! AACAGTATTTAAAAAATCCT+TGG - Chr2:71224351-71224370 MsG0280010541.01.T01:intron 20.0%
!! AACTACAGCTAAAAAAAAAA+GGG + Chr2:71223516-71223535 None:intergenic 20.0%
!! CTATCAATTATCAAACATAT+TGG + Chr2:71223250-71223269 None:intergenic 20.0%
!! TAATATCAAACAAAGTGATA+TGG + Chr2:71223593-71223612 None:intergenic 20.0%
!! TTGAAAGACTAAATATATGA+TGG - Chr2:71223153-71223172 MsG0280010541.01.T01:CDS 20.0%
!!! ATGTTGCTTTTCAAATTAAA+CGG - Chr2:71222350-71222369 MsG0280010541.01.T01:CDS 20.0%
!!! CAATATGTTTGATAATTGAT+AGG - Chr2:71223248-71223267 MsG0280010541.01.T01:CDS 20.0%
!!! GATTTTTTAAATACTGTTTC+TGG + Chr2:71224349-71224368 None:intergenic 20.0%
!!! GTTATGTACAATATATTTTG+CGG - Chr2:71224805-71224824 MsG0280010541.01.T01:intron 20.0%
!!! TAGTGAAAGAAAATTTTGTT+GGG + Chr2:71223730-71223749 None:intergenic 20.0%
! AAATTTAGGGATTTCAAAGA+TGG + Chr2:71224208-71224227 None:intergenic 25.0%
! ACATAATATTACATTGTAGC+TGG + Chr2:71222556-71222575 None:intergenic 25.0%
! CAAATATACTACTCAACTAT+TGG + Chr2:71224588-71224607 None:intergenic 25.0%
! GAGTGTGAAATTGTTTATTA+GGG - Chr2:71223221-71223240 MsG0280010541.01.T01:CDS 25.0%
! GTTTCGGATATGAAAATAAT+GGG + Chr2:71224124-71224143 None:intergenic 25.0%
! TGAGTGTGAAATTGTTTATT+AGG - Chr2:71223220-71223239 MsG0280010541.01.T01:CDS 25.0%
! TGTTTATCAATAGCAAGTAT+TGG - Chr2:71223110-71223129 MsG0280010541.01.T01:CDS 25.0%
! TGTTTCGGATATGAAAATAA+TGG + Chr2:71224125-71224144 None:intergenic 25.0%
! TTGCTCAAGAAACTTAAAAA+AGG + Chr2:71222622-71222641 None:intergenic 25.0%
! TTTGAAAAGGGTAAATGAAA+TGG + Chr2:71223038-71223057 None:intergenic 25.0%
! TTTGAGAATAGTTAGTGTTT+CGG + Chr2:71224140-71224159 None:intergenic 25.0%
!! AACATAAAGAATTTGAAGCT+TGG + Chr2:71224524-71224543 None:intergenic 25.0%
!! ACATAAAGAATTTGAAGCTT+GGG + Chr2:71224523-71224542 None:intergenic 25.0%
!! ATTTCATTTACCCTTTTCAA+AGG - Chr2:71223037-71223056 MsG0280010541.01.T01:CDS 25.0%
!! GTAGTGAAAGAAAATTTTGT+TGG + Chr2:71223731-71223750 None:intergenic 25.0%
!! TCACTTTGTTTGATATTAAC+AGG - Chr2:71223595-71223614 MsG0280010541.01.T01:intron 25.0%
!! TTATTCTTATGCCCTTTTTA+AGG - Chr2:71222795-71222814 MsG0280010541.01.T01:CDS 25.0%
!!! AATTCTCATGCATTTTTTCT+TGG - Chr2:71222957-71222976 MsG0280010541.01.T01:CDS 25.0%
!!! ATTTTAACTTCAGACTATGA+AGG - Chr2:71224765-71224784 MsG0280010541.01.T01:intron 25.0%
!!! CTCTTTTTTTTTGGATGATA+TGG + Chr2:71224670-71224689 None:intergenic 25.0%
!!! TCTTTACTTTGCTTTTCATA+GGG - Chr2:71222496-71222515 MsG0280010541.01.T01:intron 25.0%
!!! TCTTTACTTTGCTTTTTGTA+GGG - Chr2:71222693-71222712 MsG0280010541.01.T01:CDS 25.0%
!!! TGATATGGTCTCTTTTTTTT+TGG + Chr2:71224679-71224698 None:intergenic 25.0%
!!! TTTTTTTTTTCAAGTAGCGA+GGG - Chr2:71223323-71223342 MsG0280010541.01.T01:CDS 25.0%
!!! TTTTTTTTTTTCAAGTAGCG+AGG - Chr2:71223322-71223341 MsG0280010541.01.T01:CDS 25.0%
AAAAAAGAGACCATATCATC+CGG - Chr2:71224681-71224700 MsG0280010541.01.T01:CDS 30.0%
AAACAGCCTCTTAAAAAACA+GGG - Chr2:71223411-71223430 MsG0280010541.01.T01:CDS 30.0%
AACGAAATCTAGAAAGATGA+AGG + Chr2:71223282-71223301 None:intergenic 30.0%
ACATGCAAATATTCTAGGTT+AGG + Chr2:71224286-71224305 None:intergenic 30.0%
ACATTCTAACCAACTTAGAA+AGG + Chr2:71224378-71224397 None:intergenic 30.0%
ACCTAGAATATTTGCATGTT+AGG - Chr2:71224287-71224306 MsG0280010541.01.T01:intron 30.0%
ATATCCACATTATCAACACA+TGG - Chr2:71224032-71224051 MsG0280010541.01.T01:intron 30.0%
ATCCAACCTGTTTCAAATTT+AGG + Chr2:71224222-71224241 None:intergenic 30.0%
ATGCATGAGAATTGAGAATT+TGG + Chr2:71222950-71222969 None:intergenic 30.0%
CCTAGAATATTTGCATGTTA+GGG - Chr2:71224288-71224307 MsG0280010541.01.T01:intron 30.0%
CTAGAATATTTGCATGTTAG+GGG - Chr2:71224289-71224308 MsG0280010541.01.T01:intron 30.0%
GAAATCGTTAATCATGGATT+AGG - Chr2:71222835-71222854 MsG0280010541.01.T01:CDS 30.0%
TATTCTCATCTCTTTAACAG+CGG - Chr2:71224640-71224659 MsG0280010541.01.T01:intron 30.0%
TCCAACCTGTTTCAAATTTA+GGG + Chr2:71224221-71224240 None:intergenic 30.0%
TCTCTCAAGAACCTTAAAAA+GGG + Chr2:71222809-71222828 None:intergenic 30.0%
TGGTAATTACTATGTAGACT+AGG - Chr2:71222977-71222996 MsG0280010541.01.T01:CDS 30.0%
TTACATCCTGATGATATCTT+TGG + Chr2:71224933-71224952 None:intergenic 30.0%
! AACAGGTTGGATTTAAAAGT+CGG - Chr2:71224230-71224249 MsG0280010541.01.T01:CDS 30.0%
! AATATATTTTGCGGAATGCA+AGG - Chr2:71224814-71224833 MsG0280010541.01.T01:intron 30.0%
! CATAAAGAATTTGAAGCTTG+GGG + Chr2:71224522-71224541 None:intergenic 30.0%
! GAAATCCCTAAATTTGAAAC+AGG - Chr2:71224213-71224232 MsG0280010541.01.T01:intron 30.0%
!! AATAGAATGCTTTTGGAGAA+AGG - Chr2:71224879-71224898 MsG0280010541.01.T01:CDS 30.0%
!! CCAAAAGCATTCTATTAGAA+GGG + Chr2:71224875-71224894 None:intergenic 30.0%
!! CTCTTTACTTTGCTTTTCAT+AGG - Chr2:71222495-71222514 MsG0280010541.01.T01:intron 30.0%
!! TATGAAAATAATGGGCTTCA+AGG + Chr2:71224116-71224135 None:intergenic 30.0%
!! TCCAAAAGCATTCTATTAGA+AGG + Chr2:71224876-71224895 None:intergenic 30.0%
!!! CTCTTTACTTTGCTTTTTGT+AGG - Chr2:71222692-71222711 MsG0280010541.01.T01:CDS 30.0%
!!! TTTTTTTTTCAAGTAGCGAG+GGG - Chr2:71223324-71223343 MsG0280010541.01.T01:CDS 30.0%
AAAAAGAGACCATATCATCC+GGG - Chr2:71224682-71224701 MsG0280010541.01.T01:CDS 35.0%
AAACTTTCGACGTTAAAGGT+TGG - Chr2:71224157-71224176 MsG0280010541.01.T01:intron 35.0%
AAAGTTACAGAAGCGATCAT+AGG + Chr2:71223840-71223859 None:intergenic 35.0%
AACTTCAGACTATGAAGGTT+GGG - Chr2:71224770-71224789 MsG0280010541.01.T01:intron 35.0%
AAGTTTCTTGAGCAAATCCA+CGG - Chr2:71222627-71222646 MsG0280010541.01.T01:CDS 35.0%
ACACATTCAAGAACCGAAAA+TGG + Chr2:71224720-71224739 None:intergenic 35.0%
AGGGCATAAGAATAAGTTAG+TGG + Chr2:71222790-71222809 None:intergenic 35.0%
ATATCCACAACATTAACGCA+GGG - Chr2:71223975-71223994 MsG0280010541.01.T01:intron 35.0%
ATGCATAAGAGTGGAGAAAT+TGG + Chr2:71222721-71222740 None:intergenic 35.0%
ATGTGTGAGAAAGGAGAATT+TGG + Chr2:71222524-71222543 None:intergenic 35.0%
CAAGAAAGAATGCATAAGAG+TGG + Chr2:71222730-71222749 None:intergenic 35.0%
CAAGAAAGAATGTGTGAGAA+AGG + Chr2:71222533-71222552 None:intergenic 35.0%
CACATTCAAGAACCGAAAAT+GGG + Chr2:71224719-71224738 None:intergenic 35.0%
CATACGGAAATCGTTAATCA+TGG - Chr2:71222829-71222848 MsG0280010541.01.T01:CDS 35.0%
CCCTAACATGCAAATATTCT+AGG + Chr2:71224291-71224310 None:intergenic 35.0%
CTACAACACTTCTTTCTAAG+CGG - Chr2:71223747-71223766 MsG0280010541.01.T01:CDS 35.0%
GAAACAGCCTCTTAAAAAAC+AGG - Chr2:71223410-71223429 MsG0280010541.01.T01:CDS 35.0%
GATTAGGTCAGCAATCAAAA+GGG - Chr2:71222851-71222870 MsG0280010541.01.T01:CDS 35.0%
GTCTCTCAAGAACCTTAAAA+AGG + Chr2:71222810-71222829 None:intergenic 35.0%
GTTAAACTGTCGTCATTGTT+GGG - Chr2:71224468-71224487 MsG0280010541.01.T01:intron 35.0%
TAACTTCAGACTATGAAGGT+TGG - Chr2:71224769-71224788 MsG0280010541.01.T01:intron 35.0%
TAAGGTTCTTGAGAGACATA+CGG - Chr2:71222813-71222832 MsG0280010541.01.T01:CDS 35.0%
TAATGTGGATATCTTTCTCG+CGG + Chr2:71224024-71224043 None:intergenic 35.0%
TCTCAAACTTTCGACGTTAA+AGG - Chr2:71224153-71224172 MsG0280010541.01.T01:intron 35.0%
TCTTGTCCAAAGATATCATC+AGG - Chr2:71224924-71224943 MsG0280010541.01.T01:CDS 35.0%
TGAAGTTAACATCGTTGAAG+TGG + Chr2:71223805-71223824 None:intergenic 35.0%
TGATGATATCTTTGGACAAG+AGG + Chr2:71224925-71224944 None:intergenic 35.0%
TTACCAAATATCGTTGGAAC+AGG - Chr2:71222244-71222263 MsG0280010541.01.T01:CDS 35.0%
TTGCTCGTGAACCTTAAAAA+AGG + Chr2:71222401-71222420 None:intergenic 35.0%
! CCCTTCTAATAGAATGCTTT+TGG - Chr2:71224872-71224891 MsG0280010541.01.T01:CDS 35.0%
! GGAATGGAAATACCCATTTT+CGG - Chr2:71224704-71224723 MsG0280010541.01.T01:intron 35.0%
! GTTGAAGCGAAACTTTTTGA+GGG + Chr2:71223909-71223928 None:intergenic 35.0%
! TCCCTAAATTTGAAACAGGT+TGG - Chr2:71224217-71224236 MsG0280010541.01.T01:intron 35.0%
! TCCTTAAGAGCCTTTGAAAA+GGG + Chr2:71223050-71223069 None:intergenic 35.0%
! TGTCTTATTACCTTTGTAGC+AGG + Chr2:71222663-71222682 None:intergenic 35.0%
!! TCCTTACTTTGCTTTTCGTA+GGG - Chr2:71222922-71222941 MsG0280010541.01.T01:CDS 35.0%
!! TTCCTTACTTTGCTTTTCGT+AGG - Chr2:71222921-71222940 MsG0280010541.01.T01:CDS 35.0%
!! TTGAAGCGAAACTTTTTGAG+GGG + Chr2:71223908-71223927 None:intergenic 35.0%
!!! TGTTTCTGGTGCATTGTTTT+TGG + Chr2:71224335-71224354 None:intergenic 35.0%
!!! TTTTTTAAGAGGCTGTTTCC+AGG + Chr2:71223409-71223428 None:intergenic 35.0%
AAAAAAAAAGGGCAACCCGA+TGG + Chr2:71223505-71223524 None:intergenic 40.0%
AAAAGAGACCATATCATCCG+GGG - Chr2:71224683-71224702 MsG0280010541.01.T01:CDS 40.0%
AAATGGGTATTTCCATTCCC+CGG + Chr2:71224703-71224722 None:intergenic 40.0%
AACATCGTTGAAGTGGAGAA+CGG + Chr2:71223798-71223817 None:intergenic 40.0%
AACCAACTTAGAAAGGACCA+AGG + Chr2:71224371-71224390 None:intergenic 40.0%
AATGTGGATATCTTTCTCGC+GGG + Chr2:71224023-71224042 None:intergenic 40.0%
ACCCTACGAAAAGCAAAGTA+AGG + Chr2:71222926-71222945 None:intergenic 40.0%
ATCCTTGGTCCTTTCTAAGT+TGG - Chr2:71224366-71224385 MsG0280010541.01.T01:intron 40.0%
ATGCGACACAATAACTCATC+TGG + Chr2:71223695-71223714 None:intergenic 40.0%
CGATATTTGGTAAGCTGGAT+TGG + Chr2:71222237-71222256 None:intergenic 40.0%
CTTAATACAACGTCGTGTTG+AGG - Chr2:71224063-71224082 MsG0280010541.01.T01:intron 40.0%
GATATCCACAACATTAACGC+AGG - Chr2:71223974-71223993 MsG0280010541.01.T01:intron 40.0%
GCCTCTTAAAAAACAGGGTA+AGG - Chr2:71223416-71223435 MsG0280010541.01.T01:CDS 40.0%
GGATTAGGTCAGCAATCAAA+AGG - Chr2:71222850-71222869 MsG0280010541.01.T01:CDS 40.0%
GGTTAAACTGTCGTCATTGT+TGG - Chr2:71224467-71224486 MsG0280010541.01.T01:intron 40.0%
TCCAACGATATTTGGTAAGC+TGG + Chr2:71222242-71222261 None:intergenic 40.0%
TCCAGCTTACCAAATATCGT+TGG - Chr2:71222238-71222257 MsG0280010541.01.T01:CDS 40.0%
TCTTGCGAGCAAACAGATTA+CGG + Chr2:71223952-71223971 None:intergenic 40.0%
TTAAGGTTCACGAGCAAATC+CGG - Chr2:71222404-71222423 MsG0280010541.01.T01:CDS 40.0%
TTGAAAGAGGATGGATCATG+AGG + Chr2:71223871-71223890 None:intergenic 40.0%
! ACCCTTTTCAAAGGCTCTTA+AGG - Chr2:71223046-71223065 MsG0280010541.01.T01:CDS 40.0%
! ATTTGGTAAGCTGGATTGGA+GGG + Chr2:71222233-71222252 None:intergenic 40.0%
! CTCCTTAAGAGCCTTTGAAA+AGG + Chr2:71223051-71223070 None:intergenic 40.0%
! GGTTGAAGCGAAACTTTTTG+AGG + Chr2:71223910-71223929 None:intergenic 40.0%
! TATTTGCATGTTAGGGGCAT+TGG - Chr2:71224295-71224314 MsG0280010541.01.T01:intron 40.0%
! TATTTGGTAAGCTGGATTGG+AGG + Chr2:71222234-71222253 None:intergenic 40.0%
!! CTAGCCATGTGTTGATAATG+TGG + Chr2:71224039-71224058 None:intergenic 40.0%
!!! GCCTTACCCTGTTTTTTAAG+AGG + Chr2:71223420-71223439 None:intergenic 40.0%
ACATCGTTGAAGTGGAGAAC+GGG + Chr2:71223797-71223816 None:intergenic 45.0%
ACTGCTATTGAGTCCTGAGA+AGG + Chr2:71223650-71223669 None:intergenic 45.0%
AGGGTCTTCTTCTGCTAGAA+AGG - Chr2:71222870-71222889 MsG0280010541.01.T01:CDS 45.0%
ATGTGGATATCTTTCTCGCG+GGG + Chr2:71224022-71224041 None:intergenic 45.0%
CAACACTTCTTTCTAAGCGG+TGG - Chr2:71223750-71223769 MsG0280010541.01.T01:CDS 45.0%
CAGCCTGTTCCAACGATATT+TGG + Chr2:71222250-71222269 None:intergenic 45.0%
CCATCCTCTTTCAATCAACC+AGG - Chr2:71223877-71223896 MsG0280010541.01.T01:intron 45.0%
CCTGGTTGATTGAAAGAGGA+TGG + Chr2:71223880-71223899 None:intergenic 45.0%
CTCATCTCTTTAACAGCGGA+AGG - Chr2:71224644-71224663 MsG0280010541.01.T01:intron 45.0%
CTGCTATTGAGTCCTGAGAA+GGG + Chr2:71223649-71223668 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - Chr2:71223438-71223457 MsG0280010541.01.T01:CDS 45.0%
GTTGTTGTCATGTGACCGTA+AGG - Chr2:71223369-71223388 MsG0280010541.01.T01:CDS 45.0%
TAAGGTTCACGAGCAAATCC+GGG - Chr2:71222405-71222424 MsG0280010541.01.T01:CDS 45.0%
TCAGGACTCAATAGCAGTTG+TGG - Chr2:71223652-71223671 MsG0280010541.01.T01:intron 45.0%
TCGTCATTGTTGGGATGATG+TGG - Chr2:71224477-71224496 MsG0280010541.01.T01:intron 45.0%
TGAGCCTGGTTGATTGAAAG+AGG + Chr2:71223884-71223903 None:intergenic 45.0%
TTTCCATTCCCCGGATGATA+TGG + Chr2:71224694-71224713 None:intergenic 45.0%
! TTTGAAGCTTGGGGCAAAGT+CGG + Chr2:71224513-71224532 None:intergenic 45.0%
!! AATGGTCCGATAGAGCATTG+TGG + Chr2:71223623-71223642 None:intergenic 45.0%
!! TGTTAGGGGCATTGGTTGTA+TGG - Chr2:71224303-71224322 MsG0280010541.01.T01:intron 45.0%
ACGGGGAGTGAATAGAAGAG+TGG + Chr2:71223779-71223798 None:intergenic 50.0%
AGACCATATCATCCGGGGAA+TGG - Chr2:71224688-71224707 MsG0280010541.01.T01:intron 50.0%
AGCAAATCCACGGTTCGCAA+TGG - Chr2:71222637-71222656 MsG0280010541.01.T01:CDS 50.0%
AGCAAATCCGGGATTCACAG+TGG - Chr2:71222416-71222435 MsG0280010541.01.T01:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG + Chr2:71223353-71223372 None:intergenic 50.0%
CAGAAGACCACTGTGAATCC+CGG + Chr2:71222426-71222445 None:intergenic 50.0%
CATCGTTGAAGTGGAGAACG+GGG + Chr2:71223796-71223815 None:intergenic 50.0%
CCTGGCAAAAAGCTCGTTTG+AGG + Chr2:71222208-71222227 None:intergenic 50.0%
CGGGGAGTGAATAGAAGAGT+GGG + Chr2:71223778-71223797 None:intergenic 50.0%
CTAGCCCTGCGTTAATGTTG+TGG + Chr2:71223982-71224001 None:intergenic 50.0%
GACTTGAACCCGTGACCTTA+CGG + Chr2:71223387-71223406 None:intergenic 50.0%
GGGGAGTGAATAGAAGAGTG+GGG + Chr2:71223777-71223796 None:intergenic 50.0%
GTCATGTGACCGTAAGGTCA+CGG - Chr2:71223375-71223394 MsG0280010541.01.T01:CDS 50.0%
GTTGGAACAGGCTGATGCTA+AGG - Chr2:71222256-71222275 MsG0280010541.01.T01:CDS 50.0%
TCATGTGACCGTAAGGTCAC+GGG - Chr2:71223376-71223395 MsG0280010541.01.T01:CDS 50.0%
TGCGAGCAAACAGATTACGG+CGG + Chr2:71223949-71223968 None:intergenic 50.0%
TTCGCAATGGCCTGCTACAA+AGG - Chr2:71222650-71222669 MsG0280010541.01.T01:CDS 50.0%
! CAGGTGCCACAATGCTCTAT+CGG - Chr2:71223614-71223633 MsG0280010541.01.T01:intron 50.0%
! CCTCAAACGAGCTTTTTGCC+AGG - Chr2:71222205-71222224 MsG0280010541.01.T01:CDS 50.0%
!! ACTTTTTGAGGGGATGAGCC+TGG + Chr2:71223898-71223917 None:intergenic 50.0%
AAGGTCACGGGTTCAAGTCC+TGG - Chr2:71223388-71223407 MsG0280010541.01.T01:CDS 55.0%
ACTGAAGCTCCCGCATATGC+AGG + Chr2:71223482-71223501 None:intergenic 55.0%
ATGCGGGAGCTTCAGTCCAT+CGG - Chr2:71223486-71223505 MsG0280010541.01.T01:intron 55.0%
CAAATGGTGAGACCCCTTCC+TGG - Chr2:71223454-71223473 MsG0280010541.01.T01:CDS 55.0%
CAAGTAGCGAGGGGTAACCT+TGG - Chr2:71223333-71223352 MsG0280010541.01.T01:CDS 55.0%
CAGGAAGGGGTCTCACCATT+TGG + Chr2:71223456-71223475 None:intergenic 55.0%
CATATGCAGGGTCCAGGAAG+GGG + Chr2:71223469-71223488 None:intergenic 55.0%
CTGAAGCTCCCGCATATGCA+GGG + Chr2:71223481-71223500 None:intergenic 55.0%
CTTCCTGGACCCTGCATATG+CGG - Chr2:71223469-71223488 MsG0280010541.01.T01:CDS 55.0%
GAGCAAACAGATTACGGCGG+TGG + Chr2:71223946-71223965 None:intergenic 55.0%
GAGTCCTGAGAAGGGACGAA+TGG + Chr2:71223641-71223660 None:intergenic 55.0%
GCATATGCAGGGTCCAGGAA+GGG + Chr2:71223470-71223489 None:intergenic 55.0%
TCTTTCTCGCGGGGAAGTTG+TGG + Chr2:71224013-71224032 None:intergenic 55.0%
TTCCTGGACCCTGCATATGC+GGG - Chr2:71223470-71223489 MsG0280010541.01.T01:CDS 55.0%
! AAGCTGGATTGGAGGGATCC+TGG + Chr2:71222226-71222245 None:intergenic 55.0%
AGGGGTAACCTTGGCGCAAC+TGG - Chr2:71223342-71223361 MsG0280010541.01.T01:CDS 60.0%
AGTCTAGCGTCGTGCGAGTC+TGG + Chr2:71222161-71222180 None:intergenic 60.0%
CGCATATGCAGGGTCCAGGA+AGG + Chr2:71223471-71223490 None:intergenic 60.0%
CGGACCATTCGTCCCTTCTC+AGG - Chr2:71223634-71223653 MsG0280010541.01.T01:intron 60.0%
GGCGGTGGCGACGATAACAT+TGG + Chr2:71223931-71223950 None:intergenic 60.0%
GTCTAGCGTCGTGCGAGTCT+GGG + Chr2:71222160-71222179 None:intergenic 60.0%
TAGCAGGCCATTGCGAACCG+TGG + Chr2:71222647-71222666 None:intergenic 60.0%
TGCGGGAGCTTCAGTCCATC+GGG - Chr2:71223487-71223506 MsG0280010541.01.T01:intron 60.0%
TGCTGCTGCTGCTGCTACAG+AGG - Chr2:71222444-71222463 MsG0280010541.01.T01:intron 60.0%
CTCCCGCATATGCAGGGTCC+AGG + Chr2:71223475-71223494 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 71222128 71224983 71222128 ID=MsG0280010541.01;Name=MsG0280010541.01
Chr2 mRNA 71222128 71224983 71222128 ID=MsG0280010541.01.T01;Parent=MsG0280010541.01;Name=MsG0280010541.01.T01;_AED=0.44;_eAED=0.58;_QI=0|0|0|1|1|0.83|6|0|543
Chr2 exon 71224834 71224983 71224834 ID=MsG0280010541.01.T01:exon:6757;Parent=MsG0280010541.01.T01
Chr2 exon 71224646 71224702 71224646 ID=MsG0280010541.01.T01:exon:6756;Parent=MsG0280010541.01.T01
Chr2 exon 71224220 71224294 71224220 ID=MsG0280010541.01.T01:exon:6755;Parent=MsG0280010541.01.T01
Chr2 exon 71223679 71223771 71223679 ID=MsG0280010541.01.T01:exon:6754;Parent=MsG0280010541.01.T01
Chr2 exon 71222562 71223494 71222562 ID=MsG0280010541.01.T01:exon:6753;Parent=MsG0280010541.01.T01
Chr2 exon 71222128 71222451 71222128 ID=MsG0280010541.01.T01:exon:6752;Parent=MsG0280010541.01.T01
Chr2 CDS 71224834 71224983 71224834 ID=MsG0280010541.01.T01:cds;Parent=MsG0280010541.01.T01
Chr2 CDS 71224646 71224702 71224646 ID=MsG0280010541.01.T01:cds;Parent=MsG0280010541.01.T01
Chr2 CDS 71224220 71224294 71224220 ID=MsG0280010541.01.T01:cds;Parent=MsG0280010541.01.T01
Chr2 CDS 71223679 71223771 71223679 ID=MsG0280010541.01.T01:cds;Parent=MsG0280010541.01.T01
Chr2 CDS 71222562 71223494 71222562 ID=MsG0280010541.01.T01:cds;Parent=MsG0280010541.01.T01
Chr2 CDS 71222128 71222451 71222128 ID=MsG0280010541.01.T01:cds;Parent=MsG0280010541.01.T01
Gene Sequence

>MsG0280010541.01.T01

ATGGCTCTCACTATGCAGGCACGTTTAAACCCAGACTCGCACGACGCTAGACTTCACTTTGACACTGCAGCTGTTTACCTCAAACGAGCTTTTTGCCAGGATCCCTCCAATCCAGCTTACCAAATATCGTTGGAACAGGCTGATGCTAAGGTTCACGAGCAAATCCGGGATTCACAGTGGTCTTCTGCTGCTGCTGCTGCTACAGAGGTTCTTGAGAGACATACGGAAATCGTTAATCATGGATTAGGTCAGCAATCAAAAGGGTCTTCTTCTGCTAGAAAGCGAGGGGTAACCTTGGCGCAACTGGTAAAGTTGTTGTCATGTGACCGTAAGGTCACGGGTTCAAGTCCTGGAAACAGCCTCTTAAAAAACAGGGTGCCACAATGCTCTATCGGACCATTCGTCCCTTCTCAGGACTCAATAGCAGTTGTGGATAGAATAAGCGAATTACCAGATGAGTTATTGTGTCGCATACTCTCTTTTCTCCCAACAAAATTTTCTTTCACTACAACACTTCTTTCTAAGCGGTGGACCCCACTCTTCTATTCACTCCCCGTTCTCCACTTCAACGATGTTAACTTCAAAGACTTTCAAACCTATGATCGCTTCTGTAACTTTGTTGATAACCTCATGATCCATCCTCTTTCAATCAACCAGGCTCATCCCCTCAAAAAGTTTCGCTTCAACCAATGTTATCGTCGCCACCGCCGTAATCTGTTTGCTCGCAAGAAAGATATCCACAACATTAACGCAGGGCTAGAAGTCGCACCACAACTTCCCCGCGAGAAAGATATCCACATTATCAACACATGGCTAGAAGTCTTAATACAACGTCGTGTTGAGGAGTTTGATCTCAAGCTGTATTTTCACACCTTGAAGCCCATTATTTTCATATCCGAAACACTAACTATTCTCAAACTTTCGACGTTAAAGGTTGGAAATGATACTTCATGTGTTAATCTTCCATCTTTGAAATCCCTAAATTTGAAACAGGTTGGATTTAAAAGTCGGAATGATTACATAAACTTTCTTTCTTCTTGTCCTAACCTAGAATATTTGCATGTTAGGGGCATTGGTTGTATGGAACGTGCCAAAAACAATGCACCAGAAACAGTATTTAAAAAATCCTTGGTCCTTTCTAAGTTGGTTAGAATGTCTATCGAGTCTGAAGATGCTCTTTTCAAAGTCATTTCAATGTTTCCAAACTTAATTCATATTAAATTAAGGTTAAACTGTCGTCATTGTTGGGATGATGTGGTAGAACTACTCCGACTTTGCCCCAAGCTTCAAATTCTTTATGTTAAAAAGCGGAAGGCCATATCATCCAAAAAAAAAGAGACCATATCATCCGGGGAATGGAAATACCCATTTTCGGTTCTTGAATGTGTTTCGTATCATCTCAAATCATGTACTATTTTAACTTCAGACTATGAAGGTTGGGCAAATGATATTTGTTATGTACAATATATTTTGCGGAATGCAAGGCTTTTACAAGACATGACTATCAACTTTTACGAGATCCCTTCTAATAGAATGCTTTTGGAGAAAGGTCAGATTATAGAAGAATTATCCTCTTGTCCAAAGATATCATCAGGATGTAAACTTTCATTTGAATTATCCTATTGTTCTTAG
Protein sequence

>MsG0280010541.01.T01

MALTMQARLNPDSHDARLHFDTAAVYLKRAFCQDPSNPAYQISLEQADAKVHEQIRDSQWSSAAAAATEVLERHTEIVNHGLGQQSKGSSSARKRGVTLAQLVKLLSCDRKVTGSSPGNSLLKNRVPQCSIGPFVPSQDSIAVVDRISELPDELLCRILSFLPTKFSFTTTLLSKRWTPLFYSLPVLHFNDVNFKDFQTYDRFCNFVDNLMIHPLSINQAHPLKKFRFNQCYRRHRRNLFARKKDIHNINAGLEVAPQLPREKDIHIINTWLEVLIQRRVEEFDLKLYFHTLKPIIFISETLTILKLSTLKVGNDTSCVNLPSLKSLNLKQVGFKSRNDYINFLSSCPNLEYLHVRGIGCMERAKNNAPETVFKKSLVLSKLVRMSIESEDALFKVISMFPNLIHIKLRLNCRHCWDDVVELLRLCPKLQILYVKKRKAISSKKKETISSGEWKYPFSVLECVSYHLKSCTILTSDYEGWANDICYVQYILRNARLLQDMTINFYEIPSNRMLLEKGQIIEELSSCPKISSGCKLSFELSYCS*